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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_41#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1393 fasta sequence
[CCGTTTTCCTCGTGCATCGAGTGCGAAATTATCCACGCGAAACACGTCGGGTGGATAAACACGATCGTGTTGCAAACACGATCACCGTTTCCCCGAATTTACCGCCGCAATATTGGATCGCCACGAGTTGCTGGCCGATCATCTGGGCCACGTGTTACCGTGTTTTCAGAGAAGAGTGGCAACACGGTGAATATTTTATGACCGGAGGATAGGATAGGATAGAACTCGATTCCCTTTTCTTTTTTTCGAGCACGGGTGGACAGCCAGACATGCCGTACTCGAAGTGTAGAACGTTTCTCCGTTTCTTCGCGATTTGTTCGTTCTCGACTTGTGGACTGGTGATGGCTCAACTCGAGGATACCAGATACCCCGACCAAAGGATAGTGTTCCCCGATCGGGGGAGAGAAACGGCGAATCCTGCGTTGGAGGGCGGGCCGAGTGGAGGAGGAATTGGCGAATTGGCGAAATCGATACAATTAGCCAAGAAAATCAGTTCCATTAATTCGAGAGACGATTTTCTTAAATTAGTCAAAGATGTGCCGAAGGATATATCTTTCTTCTCCTCGAGCAGTAGAATGGGAGAAACTGAACGTTCGAATGCCGAGCGACCAAATCAAGCTTTGTGTATGCCTGAATTGCAAACAGTTCCTCTATTAGAAAATGAGCCATCTGTTATTTATTATCCAACTTGCACACGGATCAAAAGATGCGGAGGTTGTTGTACACACTCACTCCTCTCTTGTCAACCAACGGCTACGGAAATTCGAAATTTCGAGATTCTTGTGACAATTCTTGAATCCAGTGGTAAATTAAAATATCAAGGCAAACGTATCGTACCGATAGAGGAGCACACGCAATGCACGTGTGACTGCAAAATAAAGGAGACGGACTGTAACAAGAAACAGTCTTATGTACCAGAGGAATGTACATGTGCGTGCAACAACGTCGATGAACAGAAAAAGTGTAATGAAAGCAACATAAAAATGTGGCACCCAGATCTTTGTAGCTGTTTTTGCAGAGAAACACAGGAATGTTCAACTGGTTTTTATTTCGACCAAAATTCATGCAGATGCCTGCAAGTACCGCTATCTAGAACATGGTTTACATCCACAAAAGGTTCTGATTATAGATTCGGACAAACACAAAGACCAGATAATGTACCACCGGTAATAATTGCCCTAGATTCAGATGATCCTAGAAGAAAACCTAAACCAGATCCAGAATAATCAGATTGGTCATTTATAGGCTAAATTTTAAAACAATTTAATTTCTTATCTTTGTGCCATTTTGTTATACATAAAAGTATTGATATTATTTATGTATTAATATTAATATTAATATTAGTTATTGCAAAAAATAAATGAATGTATTTTTATATATCAAAAAATATTGT]
[+] EMBL BI507829 [CCGTTTTCCTCGTGCATCGAGTGCGAAATTATCCACGCGAAACACGTCGGGTGGATAAACACGATCGTGTTGCAAACACGATCACCGTTTCCCCGAATTTACCGCCGCAATATTGGATCGCCACGAGTTGCTGGCCGATCATCTGGGCCACGTGTTACCGTGTTTTCAGAGAAGAGTGGCAACACGGTGAATATTTTATGACCGGAGGATAGGATAGGATAGAACTCGATTCCCTTTTCTTTTTTTCGAGCACGGGTGGACAGCCAGACATGCCGTACTCGAAa ]
[+] EMBL BI515775 [ GAAACACGTCGGGTGGATAAACACGATCGTGTTGCAAACACGATCACCGTTTCCCCGAATTTACCGCCGCAATATTGGATCGCCACGAGTTGCTGGCCGATCATCTGGGCCACGTGTTACCGTGTTTTCAGAGAAGAGTGGCAACACGGTGAATATTTTATGACCGGAGGATAGGATAGGATAGAACTCGATTCCCTTTTCTTTTTTTCGAGCACGGGTGGACAGCCAGACATGCCGTACTCTAAGTGTAGAACGTTTCTCCGTTTCTTCGCGATTTGTTCGTTCTCGATTTGTGGACTGGTGATGGCTCAACTCGAGGATACCAGATACCCCGACCAAAGGATAGTGTTCCCCGATCGGGGGAGAGAAACGGCGAATCCTGCGTTGGAGGGCGGGCCGAGTGGAGGAGGAATTGGCGAATTGGCGAAATCGATACAATTAGCCAAGAAAATCAGTTCCATTAATTCGAGAGACGATTTTCTTAAATT ]
[+] EMBL BI515817 [ CGACTTGTGGACTGGTGATGGCTCAACTCGAGGATACCAGATACCCCGACCAAAGGATAGTGTTCCCCGATCGGGGGAGAGAAACGGCGAATCCTGCGTTGGAGGGCGGGCCGAGTGGAGGAGGAATTGGCGAATTGGCGAAATCGATACAATTAGCCAAGAAAATCAGTTCCATTAATTCGAGAGACGATTTTCTTAAATTAGTCAAAGATGTGCCGAAGGATATATCTTTCTTCTCCTCGAGCAGTAGAATGGGAGAAACTGAACGTTCGAATGCCGAGCGACCAAATCAAGCTTTGTGTATGCCTGAATTGCAAACAGTTCCTCTATTAGAAAATGAGCCATCTGTTATTTATTATCCAACTTGCACACGGATCAAAAGATGCGGAGGTTGTTGTACACACTCACTCCTCTCTTGTCAACCAACGGCTACGGAAATTCGAAATTTCGAGATTCTTGTGACAATTCTTGAATCCAGTGGT ]
[+] EMBL BI505579 [ TTAAATTAGTCAAAGATGTGCCGAAGGATATATCTTTCTTCTCCTCGAGCAGTAGAATGGGAGAAACTGAACGTTCGAATGCCGAGCGACCAAATCAAGCTTTGTGTATGCCTGAATTGCAAACAGTTCCTCTATTAGAAAATGAGCCATCTGTTATTTATTATCCAACTTGCACACGGATCAAAAGATGCGGAGGTTGTTGTACACACTCACTCCTCTCTTGTCAACCAACGGCTACGGAAATTCGAAATTTCGAGATTCTTGTGACAATTCTTGAATCCAGTGGTAAATTAAAATATCAAGGCAAACGTATCGTACCGATAGAGGAGCACACGCAATGCACGTGTGACTGCAAAATAAAGGAGACGTACTGTAACAAGAAACAGTCTTATGTACCAGAGGAATGTACATGTGCGTGCAACAACGTCGATGAACAGAAAAAGTGTAATGAAAGCAACATAAAAATGTGGCACCCAGATCTTTGTAGCTGTTTTTGCAGAGAAACACAGGAATGTTCAACTGGTTTTTATTTCGA ]
[+] EMBL BI502979 [ ATTGCAAACAGTTCCTCTATTAGAAAATGAGCCATCTGTTATTTATTATCCAACTTGCACACGGATCAAAAGATGCGGAGGTTGTTGTACACACTCACTCCTCTCTTGTCAACCAACGGCTACGGAAATTCGAAATTTCGAGATTCTTGTGACAATTCTTGAATCCAGTGGTAAATTAAAATATCAAGGCAAACGTATCGTACCGATAGAGGAGCACACGCAATGCACGTGTGACTGCAAAATAAAGGAGACGGACTGTAACAAGAAACAGTCTTATGTACCAGAGGAATGTACATGTGCGTGCAACAACGTCGATGAACAGAAAAAGTGTAATGAAAGCAACATAAAAATGTGGCACCCAGATCTTTGTAGCTGTTTTTGCAGAGAAACACAGGAATGTTCAACTGGTTTTTATTTCGACCAAAATTCATGCAGATGCCTGCAAGTACCGCTATCTAGAACATGGTTTACATCCACAAAAGGTTCTGATTATAGATTCGGACAAACACAAAGACCAGATAATGTACCACCGGTAATAATTGCCCTAGATTCAGATGATCCTAGAAGAAAACCTAAACCAGATCCAGAATAATCAG ]
[+] EMBL BE844375 [ ATTTATTATCCAACTTGCACACGGATCAAAAGATGCGGAGGTTGTTGTACACACTCACTCCTCTCTTGTCAACCAACGGCTACGGAAATTCGAAATTTCGAGATTCTTGTGACAATTCTTGAATCCAGTGGTAAATTAAAATATCAAGGCAAACGTATCGTACCGATAGAGGAGCACACGCAATGCACGTGTGACTGCAAAATAAAGGAGACGGACTGTAACAAGAAACAGTCTTATGTACCAGAGGAATGTACATGTGCGTGCAACAACGTCGATGAACAGAAAAAGTGTAATGAAAGCAACATAAAAATGTGGCACCCAGATCTTTGTAGCTGTTTTTGCAGAGAAACACAGGAATGTTCAACTGGTTTTTATTTCGACCAAAATTCAT ATGCCTGCAAGTACCGCTATCTAGAACATGGTTTACATCCACAAAAGGTTCTGATTATAGATTCGGACAAACACAAAGACCAGATAATGTACCACCGGTAATAATTGCCCTAGATTCAGATGATCCTAGAAGAAAACCTAAACCAGATCCAGAATAATCAGATTGGTCATTTATAGGCTAAATTTTAAAACAATTTAATTTCTTATCTTTGTGCCATTTTGTTATACATAAAAGTATTGATATTATTTATGTATTAATATTAATATTAATATTAGTTATTGCAAAAAATAAATGAATGTATTTTTATATATCAAAAAATATTGT]
[+] EMBL BI515446 [ GCACACGGATCAAAAGATGCGGAGGTTGTTGTACACACTCACTCCTCTCTTGTCAACCAACGGCTACGGAAATTCGAAATTTCGAGATTCTTGTGACAGTTCTTGAATCCAGTGGTAAATTAAAGTATCAAGGCAAACGTATCGTACCGATAGAGGAGCACACGCAATGCACGTGTGACTGCAAAATAAAGGAGACGGACTGTAACAAGAAACAGTCTTATGTACCAGAGGAATGTACATGTGCGTGCAACAACGTCGATGAACAGAAAAAGTGTAATGAAAGCAACATAAAAATGTGGCACCCAGATCTTTGTAGCTGTTTTTGCAGAGAAACACAGGAATGTTCAACTGGTTTTTATTTCGACCAAAATTCATGCAGATGCCTG ]
consensusID : consensus_41#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 435 fasta sequence
[TCAGGTGCGACTTTCCTTCCGTTTTCCTCGTGCATCGAGTGCGAAACACGCGAAACACGTCGGGTGGATAAACACGATCGTGTTGCAAACACGATCACCGTTTCCCCGAATTTACCGCCGCAATATTGGATCGCCACGAGTTGCTGGCCGATCATCTGGGCCACGTGTTACCGTGTTTTCAGAGAAGAGTGGCAACACGGTGAATATTTTATGACCGGAGGATAGGATAGGATAGAACTCGATTCCCTTTTCC-TTTTTTCGAGCACGGGTGGAGCACAGGTGAACAGCCAGACATGCCGTACTCTAAGTGTAGAACGTTTCTCCGTTTCTTCGCGATTTGTTCGTTCTCGACTTGTGGACTGGTGATGGCTCAACTCGAGGATACCAGATACCCCGACCAAAGGATAGTGTTCCCCGATCGGGGGAGAGAAACGG]
[+] EMBL BI512686 [TCAGGTGCGACTTTCCTTCCGTTTTCCTCGTGCATCGAGTGCGAAACACGCGAAACTCGTCGGGTGGATAAACACGATCGTGTTGCAAACACGATCACCGTTTCCCCGAATTTACCGCCGCAATATTGGATCGCCACGAGTTGCTGGCCGATCATCTGGGCCACGTGTTACCGTGTTTTCAGAGAAGAGTGGCAACACGGTGAATATTTTATGACCGGAGGATAGGATAGGATAGAACTCGATTCCCTTTTTC TTTTTTCGAGCACGGGTGGAGCACAGGTGAACAGCCAGACATGCCGTACTCTAAGTGTAGAACGTTTCTCCGTTTCTTCGCGATTTGTTCGTTCTCGACTTGTGGACTGGTGATGGCTCAACTCGAGGATACCAGATACCCCGACCAAAGGATAGTGTTCCCCGATCGGGGGAGAGAAACGG]
[+] EMBL BI502986 [ TTCCGTTTTCCTCGTGCATCGAGTGCGAAACACGCGAAACACGTCGGGTGGATAAACACGATCGTGTTGCAAACACGATCACCGTTTCCCCGAATTTACCGCCGCAATATTGGATCGCCACGAGTTGCTGGCCGATCATCTGGGCCACGTGTTACCGTGTTTTCAGAGAAGAGTGGCAACACGGTGAATATTTTATGACCGGAGGATAGGATAGGATAGAACTCGATTCCCTTTTCCTTTTTTTCGAGCACGGGTGGAGCACAGGTGAACAGCCAGACATGCCGTACTCTAAGTG ]
[+] EMBL BI509751 [ CTCGTGCATCGAGTGCGAAACACG CGTCGGGTGGATAAACACGATCGTGTTGCAAACACGATCACCGTTTCCCCGAATTTACCGCCGCAATATTGGATCGCCACGAGTTGCTGGCCGATCATCTGGGCCACGTGTTACCGTGTTTTCAGAGAAGAGTGGCAACACGGTGAATATTTTATGACCGGAGGATAGGATAGGATAGAACTCGATTCCCTTTTCT TTTTTTCGAGCACGGGTGGAGCACAGGTGGACAGCCGTGCTCGaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_41#0 ------------------CCGTTTTCCTCGTGCATCGAGTGCGAAATTATCCACGCGAAA 42
consensus_41#1 TCAGGTGCGACTTTCCTTCCGTTTTCCTCGTGCATCGAGTGCGAAA-----CACGCGAAA 55
**************************** *********
consensus_41#0 CACGTCGGGTGGATAAACACGATCGTGTTGCAAACACGATCACCGTTTCCCCGAATTTAC 102
consensus_41#1 CACGTCGGGTGGATAAACACGATCGTGTTGCAAACACGATCACCGTTTCCCCGAATTTAC 115
************************************************************
consensus_41#0 CGCCGCAATATTGGATCGCCACGAGTTGCTGGCCGATCATCTGGGCCACGTGTTACCGTG 162
consensus_41#1 CGCCGCAATATTGGATCGCCACGAGTTGCTGGCCGATCATCTGGGCCACGTGTTACCGTG 175
************************************************************
consensus_41#0 TTTTCAGAGAAGAGTGGCAACACGGTGAATATTTTATGACCGGAGGATAGGATAGGATAG 222
consensus_41#1 TTTTCAGAGAAGAGTGGCAACACGGTGAATATTTTATGACCGGAGGATAGGATAGGATAG 235
************************************************************
consensus_41#0 AACTCGATTCCCTTTTCTTTTTTTCGAGCACGGGTGGA-----------CAGCCAGACAT 271
consensus_41#1 AACTCGATTCCCTTTTCCTTTTTTCGAGCACGGGTGGAGCACAGGTGAACAGCCAGACAT 295
***************** ******************** ***********
consensus_41#0 GCCGTACTCGAAGTGTAGAACGTTTCTCCGTTTCTTCGCGATTTGTTCGTTCTCGACTTG 331
consensus_41#1 GCCGTACTCTAAGTGTAGAACGTTTCTCCGTTTCTTCGCGATTTGTTCGTTCTCGACTTG 355
********* **************************************************
consensus_41#0 TGGACTGGTGATGGCTCAACTCGAGGATACCAGATACCCCGACCAAAGGATAGTGTTCCC 391
consensus_41#1 TGGACTGGTGATGGCTCAACTCGAGGATACCAGATACCCCGACCAAAGGATAGTGTTCCC 415
************************************************************
consensus_41#0 CGATCGGGGGAGAGAAACGGCGAATCCTGCGTTGGAGGGCGGGCCGAGTGGAGGAGGAAT 451
consensus_41#1 CGATCGGGGGAGAGAAACGG---------------------------------------- 435
********************
consensus_41#0 TGGCGAATTGGCGAAATCGATACAATTAGCCAAGAAAATCAGTTCCATTAATTCGAGAGA 511
consensus_41#1 ------------------------------------------------------------
consensus_41#0 CGATTTTCTTAAATTAGTCAAAGATGTGCCGAAGGATATATCTTTCTTCTCCTCGAGCAG 571
consensus_41#1 ------------------------------------------------------------
consensus_41#0 TAGAATGGGAGAAACTGAACGTTCGAATGCCGAGCGACCAAATCAAGCTTTGTGTATGCC 631
consensus_41#1 ------------------------------------------------------------
consensus_41#0 TGAATTGCAAACAGTTCCTCTATTAGAAAATGAGCCATCTGTTATTTATTATCCAACTTG 691
consensus_41#1 ------------------------------------------------------------
consensus_41#0 CACACGGATCAAAAGATGCGGAGGTTGTTGTACACACTCACTCCTCTCTTGTCAACCAAC 751
consensus_41#1 ------------------------------------------------------------
consensus_41#0 GGCTACGGAAATTCGAAATTTCGAGATTCTTGTGACAATTCTTGAATCCAGTGGTAAATT 811
consensus_41#1 ------------------------------------------------------------
consensus_41#0 AAAATATCAAGGCAAACGTATCGTACCGATAGAGGAGCACACGCAATGCACGTGTGACTG 871
consensus_41#1 ------------------------------------------------------------
consensus_41#0 CAAAATAAAGGAGACGGACTGTAACAAGAAACAGTCTTATGTACCAGAGGAATGTACATG 931
consensus_41#1 ------------------------------------------------------------
consensus_41#0 TGCGTGCAACAACGTCGATGAACAGAAAAAGTGTAATGAAAGCAACATAAAAATGTGGCA 991
consensus_41#1 ------------------------------------------------------------
consensus_41#0 CCCAGATCTTTGTAGCTGTTTTTGCAGAGAAACACAGGAATGTTCAACTGGTTTTTATTT 1051
consensus_41#1 ------------------------------------------------------------
consensus_41#0 CGACCAAAATTCATGCAGATGCCTGCAAGTACCGCTATCTAGAACATGGTTTACATCCAC 1111
consensus_41#1 ------------------------------------------------------------
consensus_41#0 AAAAGGTTCTGATTATAGATTCGGACAAACACAAAGACCAGATAATGTACCACCGGTAAT 1171
consensus_41#1 ------------------------------------------------------------
consensus_41#0 AATTGCCCTAGATTCAGATGATCCTAGAAGAAAACCTAAACCAGATCCAGAATAATCAGA 1231
consensus_41#1 ------------------------------------------------------------
consensus_41#0 TTGGTCATTTATAGGCTAAATTTTAAAACAATTTAATTTCTTATCTTTGTGCCATTTTGT 1291
consensus_41#1 ------------------------------------------------------------
consensus_41#0 TATACATAAAAGTATTGATATTATTTATGTATTAATATTAATATTAATATTAGTTATTGC 1351
consensus_41#1 ------------------------------------------------------------
consensus_41#0 AAAAAATAAATGAATGTATTTTTATATATCAAAAAATATTGT 1393
consensus_41#1 ------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |