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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_43#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 652 fasta sequence
[AATTGGATCTGCTCGTGAGAAAAGTCTTAGGTTTCGGTTACGAATCCAACGTCAAGTATCAAGTCGTGCCATCCGCTCTTCAAATGTGGTCTACCAGCTTGAGGGATCCTGTATTCTTCAGCATCTACAAGACCATCCTTGATTATTATCACAAATACAAGGAAAATCTTCCGAAATACACCACGGAAGAATTAAACTTCCCAGGTGTAAGCATCGAATCCGTGACCGTGGACAAGCTCATCACTTATTTTGATCATTTCGAGTCCATGTTGAACAATGGAGTGTCGATTCAAAGTCACGCAAAAGCCAAGAACACCATGATCAAAGCTCGACAATACAGGTTGAACCACAAACCTTTTACCTATCACATCGTCGTGAACAGCGACAAAAACGTCAAAGGTATGGTCCGTATCTTCCTTGGACCGAAATACGACGAGTTCGGTCATGAAGTTGACCTCGTGCACAATTACATGAACTTCATGCAGATGGACGAGTTCGTGGTTAACCTGAAAAGCGGAAGCAACACGATCGAGAGGAACAGCCACGAATCTGNCTTCGTCGTCCCGACGAGGGTCCCAGCGACGTGCTGTACAACANGCTGGTGGTCANCGANGACNGTAGCCNAGACGTTCAAGTATTCATCCAAGCCTTA]
[+] EMBL AF134821 [AATTGGATCTGCTCGTGAGAAAAGTCTTAGGTTTCGGTTACGAATCCAACGTCAAGTATCAAGTCGTGCCATCCGCTCTTCAAATGTGGTCTACCAGCTTGAGGGATCCTGTATTCTTCAGCATCTACAAGACCATCCTTGATTATTATCACAAATACAAGGAAAATCTTCCGAAATACACCACGGAAGAATTAAACTTCCCAGGTGTAAGCATCGAATCCGTGACCGTGGACAAGCTCATCACTTATTTTGATCATTTCGAGTCCATGTTGAACAATGGAGTGTCGATTCAAAGTCACGCAAAAGCCAAGAACACCATGATCAAAGCTCGACAATACAGGTTGAACCACAAACCTTTTACCTATCACATCGTCGTGAACAGCGACAAAAACGTCAAAGGTATGGTCCGTATCTTCCTTGGACCGAAATACGACGAGTTCGGTCATGAAGTTGACCTCGTGCACAATTACATGAACTTCATGCAGATGGACGAGTTCGTGGTTAACCTGAAAAGCGGAAGCAACACGATCGAGAGGAACAGCCACGAATCTGNCTTCGTCGTCCCGACGAGGGTCCCAGCGACGTGCTGTACAACANGCTGGTGGTCANCGANGACNGTAGCCNAGACGTTCAAGTATTCATCCAAGCCTTA]
consensusID : consensus_43#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 627 fasta sequence
[TCGCCCTTCGACTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAACGGAAGCAACACGATCGAGAGGAACAGCCACGAATCTGTCTTCGTCGTCCCCGACGAGGTTCCCAGCGACGTGCTGTACAACAGGCTGGTGGTCAGCGAGGACGGTAGCGGNACGTTCAAG-TATTCAT-CCCAG-CCTTACGGCTTCCCCGAG-AGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATG-CCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGG-CGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCTTTGCTCTTAGTACCGCGCAACATCCACGTGAAGGAGGTCCTCGTTCATCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTA-ATACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTAN-AAAAAAAAAGAATTCNANGTTTAAAGGAAGAGAGATGTNNAGAG-AAAAAAAGAGATGTGAACGAAATAAAAGGATNTGAAAATTACAAAAAAAAAAA]
[+] EMBL BG101646 [TCGCCCTTCGACTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAACGGAAGCAACACGATCGAGAGGAACAGCCACGAATCTGTCTTCGTCGTCCCCGACGAGGTTCCCAGCGACGTGCTGTACAACAGGCTGGTGGTCAGCGAGGACGGTAGCGAGACGTTCAAG TATTCAT CCCAG CCTTACGGCTTCCCCGAG AGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATG CCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGG CGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCTTTGCTCTTAGTACTGTCCAACATCCACGTGAAGGAGGTCCTCGTTCATCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTA ATACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTAN AAAAAAAAAGAATTC GTTTAAAGGAAGAGAGATGTNNAGAG AAAAAAAGAGATGTGAACGAAATAAAAGGATNTGAAAATT ]
[+] EMBL BG101541 [ aGNACGTTCAAGTTATTCATNCCCAGACCTTACGGCTTCCCCGAGAAGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATG CCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGG CGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCTTTGCTCTTAGTACTGTCCAACATCCACGTGAAGGAGGTCCTCGTTCATCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTA ATACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCT TTTTTAAATTATTTGAAGTANAAAAAAAAAANAATTCNANNNTTAAAG ]
[+] EMBL BG101539 [ G TATTCAT CCCAG CCTTACGGCTTCCCCGAN AGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATG CCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGG CGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCTTTGCTCTTAGTACCTCG ]
[+] EMBL BG101632 [ TATTCAT CCCAG CCTTNCGGCTTCCCCGAG AGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATGCCCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGG CGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCTTTGCTCTTAGTACCTCGg ]
[+] EMBL BG101633 [ TATTCAT CCCAG CCTTACGGCTTCCCCGAG AGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATG CCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGGCCGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCT ]
[+] EMBL AF134815 [ ACGTGAAGGAGGTCCTCGTTCATCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTATTTACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTAG AAAAAAAAAGAATTCGAAGTTTAAAGGAAGAGAGATGTAGAGAGAAAAAAAAGAGATGTGAACGAAATAAAAGGATATGAAAATTACAAAAAAAAAAA]
consensusID : consensus_43#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 563 fasta sequence
[CTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAAAGAACGGATTCCGAAGTCAAAGTAAAAACGTGCAAGATGTTCGTCAAGTTGATACTGCTCGTCTCAATGATGTTTACCTTCGTTTGCGTACGAAGTATCGAAAACGAAGTTCAGCATTTATCATTGTTCTCCTCTATTCATCCCGACTCTATCACGGATGCTGAATCAGTCGTCACCGATGGACGCTGCGTTCTTCCACCGACCACCCATACAAGTATAAATATACCTCCTAATCATCACAAAATAATGAATTCGGATATGGCACGCCTCAAGAAAAGAACGCCAAGTCACAAGGAACAAGATCAGCAACAAGATTTACGACCTGGATGTTGTGGATAAAAAGTGGATTATTCGTCATCGATAAATTCTTTCTCGTGAATATTTGTTTTGAAAGTATTTACGTACAAATTATAGATGGTATTTAAACGCATATTATGAATACGTTTTCCTCTTTTTGGTTTCTTTCACAGATAAGATAGTAAATGAAATAAAATAATGGCTATCATGCCGCATAATGATNAA]
[+] EMBL BG101648 [CTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAAAGAACGGATTCCGAAGTCAAAGTAAAAACGTGCAAGATGTTCGTCAAGTTGATACTGCTCGTCTCAATGATGTTTACCTTCGTTTGCGTACGAAGTATCGAAAACGAAGTTCAGCATTTATCATTGTTCTCCTCTATTCATCCCGACTCTATCACGGATGCTGAATCAGTCGTCACCGATGGACGCTGCGTTCTTCCACCGACCACCCATACAAGTATAAATATACCTCCTAATCATCACAAAATAATGAATTCGGATATGGCACGCCTCAAGAAAAGAACGCCAAGTCACAAGGAACAAGATCAGCAACAAGATTTACGACCTGGATGTTGTGGATAAAAAGTGGATTATTCGTCATCGATAAATTCTTTCTCGTGAATATTTGTTTTGAAAGTATTTACGTACAAATTATAGATGGTATTTAAACGCATATTATGAATACGTTTTCCTCTTTTTGGTTTCTTTCACAGATAAGATAGTAAATGAAATAAAATAATGGCTATCATGCCGCATAATGATNAA]
consensusID : consensus_43#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 312 fasta sequence
[CATCAAATTCTCNTCAGCCGGAACTTCGATAATCCCAGCCTTACGGCTTCCCCGAGAGGCTTCTTCTGCCCAAGGGCAAGANNGAAGGTATGCCGTCAATGTGCTCGTGGTCGTTTTTCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGGCGCCACATTTACGACNGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCNATCCTTTGCTCTTAGAACTGTNCAACATNCACGTGAAGGANGTCCTCGTTCATNATAAGGAGATGGAGGAGTTGAACGTTGCTNTGTNAACGTG]
[+] EMBL BG101558 [CATCAAATTCTCNTCAGCCGGAACTTCGATAATCCCAGCCTTACGGCTTCCCCGAGAGGCTTCTTCTGCCCAAGGGCAAGANNGAAGGTATGCCGTCAATGTGCTCGTGGTCGTTTTTCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGGCGCCACATTTACGACNGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCNATCCTTTGCTCTTAGAACTGTNCAACATNCACGTGAAGGANGTCCTCGTTCATNATAAGGAGATGGAGGAGTTGAACGTTGCTNTGTNAACGTG]
consensusID : consensus_43#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 240 fasta sequence
[AAGGAGGTCCTCGTTCTCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTATTTACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTAGAAAAAAAAANNANTNCNAAGTTTAAAGGAANANANATGTAAANAGAAAAAAAANANATGTNACCNAANTAAANGGATNTNAAANTTCCAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BG101537 [AAGGAGGTCCTCGTTCTCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTATTTACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTAGAAAAAAAAANNANTNCNAAGTTTAAAGGAANANANATGTAAANAGAAAAAAAANANATGTNACCNAANTAAANGGATNTNAAANTTCCAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_43#1 TCGCCCTTCGACTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAACGGAAGCA 60
consensus_43#3 ------------------------------------------------------------
consensus_43#4 ------------------------------------------------------------
consensus_43#0 ------------------------------------------------AATTGGATCTGC 12
consensus_43#2 ------------------------------------------------------------
consensus_43#1 ACACGATCGAGAGGAACAGCCACGAATCTGTCTTCGTCGTCCCCGACGAGGTTCCCAGCG 120
consensus_43#3 ------------------------------------------------------------
consensus_43#4 ------------------------------------------------------------
consensus_43#0 TCGTGAGAAAAGTCTTAGGTTTCGGTTACGAATCCAACGTCAAGTATCAAGTCGTGCCAT 72
consensus_43#2 ---------------------------------CTGGAGCACGAGGACACTGACATGGAC 27
consensus_43#1 ACGTGCTGTACAACAGGCTGGTGGTCAGCGAGGAC--GGTAGCGG--NACGTTCAAGTAT 176
consensus_43#3 -------------------------CATCAAATTCTCNTCAGCCG--GAACTTCGA---- 29
consensus_43#4 ------------------------------------------------------------
consensus_43#0 CCGCTCTTCAAATGTGGTCTACCAGCTTGAGGGATCCTGTATTCTTCAGCATCTACAAGA 132
consensus_43#2 TGAAGGAGTAGAAAAGAACGGATTCCGAAGTCAAAGTAAAAACGTGCAAGATGTTCGT-C 86
consensus_43#1 TCATCCCAGCCTTACGGCTTCCCCGAGAGGCTTCTTCTGCCCA-AGGGCAAGAAAGAAGG 235
consensus_43#3 TAATCCCAGCCTTACGGCTTCCCCGAGAGGCTTCTTCTGCCCA-AGGGCAAGANNGAAGG 88
consensus_43#4 ------------------------AAGGAGGTCCTCGTTCTCATAGGGAGATGGAGGAGT 36
consensus_43#0 CCATCCTTGATTATTATCACAAATACAAGGAAAATCTTCCGAAATACACCACGGAAGAAT 192
consensus_43#2 AAGTTGATACTGCTCGTCTCAATGATGTTTACCTTCGTTTGCG-TACGAAGTATCGAAAA 145
* * *
consensus_43#1 TATGCCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTC--CAA 293
consensus_43#3 TATGCCGT-CAATGTGCTCGTGGTCGTTTTTCCATTCGACGACTCGAACGTCGTC--CAA 145
consensus_43#4 TGAACGTTGCTCTGTAAACGTG-TAGAATTTATTTACGTAGATTTAATCTTTTCT--TCC 93
consensus_43#0 TAAACTTC-CCAGGTGTAAGCA-TCGAATCCGTGACCGTGGACAAGCTCATCACT--TAT 248
consensus_43#2 CGAAGTTCAGCATTTATCATTGTTCTCCTCTATTCATCCCGACTCTATCACGGATGCTGA 205
* * * ** *
consensus_43#1 ATAGACTCCCCTGTGTGGGGGCGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTG 353
consensus_43#3 ATAGACTCCCCTGTGTGGGGGCGCCACATTTACGACNGACGTGCTATGGGCTTCCCTCTG 205
consensus_43#4 TTATTTTTTTCTTTATTCTTAAATTA--TTTGAAGTAGAAAAAAAAANNANTNCNAAGTT 151
consensus_43#0 TTTGATCATTTCGAGTCCATGT-TGAACAATGGAGTGTCGATTCAAAGTCACGCAAAAGC 307
consensus_43#2 ATCAGTCGTCACCGATGGACGCTGCGTTCTTCCACCGACCACCCATACAAGTATAAATAT 265
* * *
consensus_43#1 GACAAGCCTGTCGATCCTTTGCTCTTAGTACCGCGCAACATCCACG---TGAAGGAGGTC 410
consensus_43#3 GACAAGCCTGTCNATCCTTTGCTCTTAGAACTGTNCAACATNCACG---TGAAGGANGTC 262
consensus_43#4 TAAAGGAANANANATGTAAANAGAAAAAAAANANATGTNACCNAAN---TAAANGGATNT 208
consensus_43#0 CAAGAACACCATGATCAAAGCTCGACAATACAGGTTGAACCACAAACCTTTTACCTATCA 367
consensus_43#2 --ACCTCCTAATCATCACAAAATAATGAATTCGGATATGGCACGCCTCAAGAAAAGAACG 323
** *
consensus_43#1 CTCGTTCATCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTAA 470
consensus_43#3 CTCGTTCATNATAAGGAGATGGAGGAGTTGAACGTTGCTNTGTNAACGTG---------- 312
consensus_43#4 NAAANTTCCAAAAAAAAAAAAAAAAAAAAAAA---------------------------- 240
consensus_43#0 CATCGTCGTGAACAGCGACAAAAACGTCAAAGGTATGGTCCGTATCTTCCTTGGACCGAA 427
consensus_43#2 CCAAGTCACAAGGAACAAGATCAGCAACAAGATTTACGACCTGGATGTTGTGGATAAAAA 383
* * *
consensus_43#1 TACGTAGATTTAATCTT-TTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTA 529
consensus_43#3 ------------------------------------------------------------
consensus_43#4 ------------------------------------------------------------
consensus_43#0 ATACGACGAGTTCGGTC-ATGAAGTTGACCTCGTGCACAATTACATGAACTTCATGCAGA 486
consensus_43#2 GTGGATTATTCGTCATCGATAAATTCTTTCTCGTGAATATTTGTTTTGAAAGTATTTACG 443
consensus_43#1 NAAAAAAAAAGAATTCNANGTTTAAAGGAAGAGAGATGTNNAGAGAAAAAAAGAGATGTG 589
consensus_43#3 ------------------------------------------------------------
consensus_43#4 ------------------------------------------------------------
consensus_43#0 TGGACGAGTTCGTGGTTAACCTGAAAAGCGGAAGCAACACGATCGAGAGGAACAGCCACG 546
consensus_43#2 TACAAATTATAGATGGTATTTAAACGCATATTATGAATACGTTTTCCTCTTTTTGGTTTC 503
consensus_43#1 AACGAAATAAAAGGATNTGAAAATTACAAAAAAAAAAA---------------------- 627
consensus_43#3 ------------------------------------------------------------
consensus_43#4 ------------------------------------------------------------
consensus_43#0 AATCTGNCTTCGTCGTCCCGACGAGGGTCCCAGCGACGTGCTGTACAACANGCTGGTGGT 606
consensus_43#2 TTTCACAGATAAGATAGTAAATGAAATAAAATAATGGCTATCATGCCGCATAATGATNAA 563
consensus_43#1 ----------------------------------------------
consensus_43#3 ----------------------------------------------
consensus_43#4 ----------------------------------------------
consensus_43#0 CANCGANGACNGTAGCCNAGACGTTCAAGTATTCATCCAAGCCTTA 652
consensus_43#2 ----------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |