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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_459#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 600 fasta sequence
[CAGGAAACCAACAGCGACCGACGAACAACATGGCCACCGAAGGCGGTCTAGCACCGGATGCTGCTGCGGGTGCAGGTGGGGGTGCAGGTTCCGACGGTATCGTCGGAGGTCCGAGAACGCCTCAGCAGATCGCCTCGCAGAAACGGCTGCAGGCGACGCAGGCGCAGGTGGACGAGGTCGTCGACATTATGAAAACGAACGTTGAAAAGGTGTTGGAGCGTGATCAAAAGTTGTCCGAGCTCGATGATCGAGCAGACGCGCTTCAGCAAGGAGCGTCGCAATTTGAACAACAAGCAGGAAAACTGAAGAGGAAGTTCTGGTTACAAAATCTGAAGATGATGATCATCATGGGCGTCATCGGAATAATCGTATTGGCCATCATTGTTGGGAAGTAACTAGATACATAGATGCACTTATCAAAGCTAATAACACTGCCATTGTAACTGTCTAAATGTTTTGTGTGATACGATCAATGTATCTCGCCACGATATAGAACGACTAATTCGGGATTAATTGAAATATCCTATCATATCCAATCATATCGTGATTATATACTGCAAGTTTTGTCGAGTTGAATTGAAACCCAGGAATCGAACCGGA]
[+] EMBL BI515550 [CAGGAAACCAACAGCGACCGACGAACAACATGGCCACCGAAGGCGGTCTAGCACCGGATGCTGCTGCGGGTGCAGGTGGGGGTGCAGGTTCCGACGGTATCGTCGGAGGTCCGAGAACGCCTCAGCAGATCGCCTCGCAGAAACGGCTGCAGGCGACGCAGGCGCAGGTGGACGAGGTCGTCGACATTATGAAAACGAACGTTGAAAAGGTGTTGGAGCGTGATCAAAAGTTGTCCGAGCTCGATGATCGAGCAGACGCGCTTCAGCAAGGAGCGTCGCAATTTGAACAACAAGCAGGAAAACTGAAGAGGAAGTTCTGGTTACAAAATCTGAAGATGATGATCATCATGGGCGTCATCGGAATAATCGTATTGGCCATCATTGTTGCGAAa ]
[+] EMBL BI515559 [CAGGAAACCAACAGCGACCGACGAACAACATGGCCACCGAAGGCGGTCTAGCACCGGATGCTGCTGCGGGTGCAGGTGGGGGTGCAGGTTCCGACGGTATCGTCGGAGGTCCGAGAACGCCTCAGCAGATCGCCTCGCAGAAACGGCTGCAGGCGACGCAGGCGCAGGTGGACGAGGTCGTCGACATTATGAAAACGAACGTTGAAAAGGTGTTGGAGCGTGATCAAAAGTTGTCCGAGCTCGATGATCGAGCAGACGCGCTTCAGCAAGGAGCGTNNCAATTTGAACAACAAGCAGGAAAACTGAAGAGGAAGTTCTGGTTACAAAATCTGAAGATGATGATCATCATGGGCGTCATCGGAATA ]
[+] EMBL BI504075 [ CGGATGCTGCTGCGGGTGCAGGTGCGGGTGCAGGTTCCGACGGTATCGTCGGAGGTCCGAGAACGCCTCAGCAGATCGCCTCGCAGAAACGGCTGCAGGCGACGCAGGCGCAGGTGGACGAGGTCGTCGACATTATGAAAACGAACGTTGAAAAGGTGTTGGAACGTGATCAAAAGTTGTCCGAGCTCGATGATCGAGCAGACGCGCTTCAGCAAGGAGCGTCGCAATTTGAACAACAAGCAGGAAAACTGAAGAGGAAGTTCTGGTTACAAAATCTGAAGATGATGATCATCATGGGCGTCATCGGAATAATCGTATTGGCCATCATTGTTGGTAAGTAACTAGATACATAGATGCACTTATCAAAGCTAATAACACTGCCATTGTAACTGTCTAAATGTTTTGTGTGATACGATCAATGTATCTCGCCACGATATAGAACGACTAATTCGGGATTAATTGAAATATCCTATCATATCCAATCATATCGTGATTATATACTGCAAGTTTTGTCGAGTTGAATTGAAACCCAGGAATCGAACCGGA]
consensusID : consensus_459#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 445 fasta sequence
[GCCACCGAAGGCGGTCTAGCACCGGATGCTGCTGCGGGTGCNNNTGCGGGTGCAGGTTCCGACGGTATCGTCGGAGGTCCGAGAACGCCTCAGCAGATCGCCTCGCAGAAACGGCTGCAGGCGACGCAGGCGCNNNTGGACGAGGTCGTCGACATTATGAAAACGAACGTTGAAAAGGTGTTGGAGCGTGATCAAAAGTTGTCCGAGCTCGATGATCGAGCAGACGCGCTTCAGCAAGGAGCGTCGCAATTTGAACAACAAGCAGGAAAACTGAAGAGGAAGTTCTGGTTACAAAATCTGAAGATGATGATCATCATGGGCGTCATCGGAATAATCGTATTGGCCATCATTGTTGCGAACTTCATGTNGNCGCGCTGGTTGGTGGAAAAAGATTTGTGTGTGAGTGNGTCTGAAGCGAGCGCCACCGGCAGCAACGACTCGCAAA]
[+] EMBL BI510968 [GCCACCGAAGGCGGTCTAGCACCGGATGCTGCTGCGGGTGCNNNTGCGGGTGCAGGTTCCGACGGTATCGTCGGAGGTCCGAGAACGCCTCAGCAGATCGCCTCGCAGAAACGGCTGCAGGCGACGCAGGCGCNNNTGGACGAGGTCGTCGACATTATGAAAACGAACGTTGAAAAGGTGTTGGAGCGTGATCAAAAGTTGTCCGAGCTCGATGATCGAGCAGACGCGCTTCAGCAAGGAGCGTCGCAATTTGAACAACAAGCAGGAAAACTGAAGAGGAAGTTCTGGTTACAAAATCTGAAGATGATGATCATCATGGGCGTCATCGGAATAATCGTATTGGCCATCATTGTTGCGAACTTCATGTNGNCGCGCTGGTTGGTGGAAAAAGATTTGTGTGTGAGTGNGTCTGAAGCGAGCGCCACCGGCAGCAACGACTCGCAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_459#0 CAGGAAACCAACAGCGACCGACGAACAACATGGCCACCGAAGGCGGTCTAGCACCGGATG 60
consensus_459#1 --------------------------------GCCACCGAAGGCGGTCTAGCACCGGATG 28
****************************
consensus_459#0 CTGCTGCGGGTGCAGGTGGGGGTGCAGGTTCCGACGGTATCGTCGGAGGTCCGAGAACGC 120
consensus_459#1 CTGCTGCGGGTGCNNNTGCGGGTGCAGGTTCCGACGGTATCGTCGGAGGTCCGAGAACGC 88
************* ** *****************************************
consensus_459#0 CTCAGCAGATCGCCTCGCAGAAACGGCTGCAGGCGACGCAGGCGCAGGTGGACGAGGTCG 180
consensus_459#1 CTCAGCAGATCGCCTCGCAGAAACGGCTGCAGGCGACGCAGGCGCNNNTGGACGAGGTCG 148
********************************************* ************
consensus_459#0 TCGACATTATGAAAACGAACGTTGAAAAGGTGTTGGAGCGTGATCAAAAGTTGTCCGAGC 240
consensus_459#1 TCGACATTATGAAAACGAACGTTGAAAAGGTGTTGGAGCGTGATCAAAAGTTGTCCGAGC 208
************************************************************
consensus_459#0 TCGATGATCGAGCAGACGCGCTTCAGCAAGGAGCGTCGCAATTTGAACAACAAGCAGGAA 300
consensus_459#1 TCGATGATCGAGCAGACGCGCTTCAGCAAGGAGCGTCGCAATTTGAACAACAAGCAGGAA 268
************************************************************
consensus_459#0 AACTGAAGAGGAAGTTCTGGTTACAAAATCTGAAGATGATGATCATCATGGGCGTCATCG 360
consensus_459#1 AACTGAAGAGGAAGTTCTGGTTACAAAATCTGAAGATGATGATCATCATGGGCGTCATCG 328
************************************************************
consensus_459#0 GAATAATCGTATTGGCCATCATTGTTGGGAAGTAACTAGATACATAGATGCACTTATCAA 420
consensus_459#1 GAATAATCGTATTGGCCATCATTGTTGCGAACTT------CATGTNGNCGCGCTGGTTGG 382
*************************** *** * * * * ** ** *
consensus_459#0 AGCTAATAACACTGCCATTGTAACTGTCTAAATGTTTTGTGTGATACGATCAATG-TATC 479
consensus_459#1 TGGAAAAAGATTTGTGTGTGAGTGNGTCTGAAG----CGAGCGCCACCGGCAGCAACGAC 438
* ** * ** ** **** ** * * * ** ** *
consensus_459#0 TCGCCACGATATAGAACGACTAATTCGGGATTAATTGAAATATCCTATCATATCCAATCA 539
consensus_459#1 TCGCAAA----------------------------------------------------- 445
**** *
consensus_459#0 TATCGTGATTATATACTGCAAGTTTTGTCGAGTTGAATTGAAACCCAGGAATCGAACCGG 599
consensus_459#1 ------------------------------------------------------------
consensus_459#0 A 600
consensus_459#1 -
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |