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These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 469 cluster # 469       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_469#0 length = 630 sequences # 3  
 consensus_469#1 length = 201 sequences # 1  
consensusID : consensus_469#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 630
fasta sequence 
                              [GGTGCAGTGCATTTTTTTTTTTATTAATAATCCAACGTGCTGCCGAGTAATATATTCATAGCAATTTACATTGAAATGTCACGAAAGTTGCATTAATAACGTTCGAGAACCGAGTTTCTTCGCAACAATTGGATAAAGCTTTGAGCAATTGTATATGAGAAACTGTAGTGCTGAGATGGTTGATTGTCTTTTAAACGCCTCTCGTTTATCAGTGAGTTTTAGAGCAATTCCAAAGGCACGATAGTTCCGATAATTTATAAGAATTTGGGTAAAATCGTTATTTAACCCGTTAATCCTTTTTAAACTCAGCACTTTTGATGGAGCATAGCTCCGGTCCTCTAAACATTTAAAACGCATACGTAAAAAAGACGTAAAAACGATGGAAAGCAGAGGAGGAGAAGTTGGACGAGTCGTACGGCTCGACGTGATTGAAAAGCTCGGTAAAAAAAACGGCAAAAAATTCAAAGAGGAAAAAATTGTGTTTAGACAGCTAGGATAGATCTTAGAGCTGCATGCATTTATATCGAGTTGTAACGAAAGTGTGATGGCCGTAAGAAAAAAAAAACTTTATGCACGAAACGTTTCGATCGCAAGTGTACCGTACCTTATCTTTGCACGCTGAAAGTAGTA]

[+] EMBL BI513614             [GGTGCAGTGCATTTTTTTTTTTATTAATAATCCAACGTGCTGCCGAGTAATATATTCATAGCAATTTACATTGAAATGTCACGAAAGTTGCATTAATAACGTTCGAGAACCGAGTTTCTTCGCAACAATTGGATAAAGCTTTGAGNAATTGTATATGAGAAACTGTAGTGCTGAGATGGTNGATTGTCTTTTAAACGCCTCTCGTTTATCANNGAGTTTTAGAGCAATTCCAAAGGCACGATAGTTCCGATAATTTATAAGAATTTGGGTAAAATCGTTATTTAACCCGTTAATCCTTTTTAAACTCAGNACTTTTGATGGAGCATAGCTCCGGTCCTCTAAACATTTAAAACGCATACGTAAAAAAGACGTAAAAACGATGG                                                                                                                                                                                                                                                       ]
[+] EMBL BI510604             [                                                                          AATGTCACGAAAGTTGCATTAATAACGTTCGAGAACCGAGTTTCTTCGCAACAATTGGATAAAGCTTTGAGCAATTGTATATGAGAAACTGTAGTGCTGAGATGGTTGATTGTCTTTTAAACGCCTCTCGTTTATCAGTGAGTTTTAGAGCAATTCCAAAGGCACGATAGTTCCGATAATTTATAAGAATTTGGGTAAAATCGTTATTTAACCCGTTAATCCTTTTTAAACTCAGCACTTTTGATGGAGCATAGCTCCGGTCCTCTAAACATTTAAAACGCATACGTAAAAAAGACGTAAAAACGATGGAAAGCAGAGGAGGAGAAGTTGGACGAGTCGTACGGCTCGACGTGATTGAAAAGCTCGGT AAAAAAACGGCAAAAAATTCAAAGAGGAAAAAATTGTGTTTAGACAGCTAGGATAGATCTTAGAGCTGCATGCATTTATATCGAGTTGTAACGAAAGTGTGATGGCCGTAA AAAAAAAAAACTTTATGCACGAAACGTTTCGATCGCAAGTGTACCGTACCTTATCTTTGCACGCTGAAAGTAGTA]
[+] EMBL BI512829             [                                                                                                  ACGTTCGAGAACCGAGTTTCTTCGCAACAATTGGATAAAGCTTTGAGCAATTGTATATGAGAAACTGTAGTGCTGAGATAGTTGATTGTCTTTTAAACGCCTCTCGTTTATCAGTGAGTTTTAGAGCAATTCCAAAGGCACGATAGTTCCGATAATTTATAAGAATTTGGGTAAAATCGTTATTTAACCCGTTAATCCTTTTTAAACTCAGCACTTTTGATGGAGCATAGCTCCGGTCCTCTAAACATTTAAAACGCATACGTAAAAAAGACGTAAAAACGATGGAAAGCAGAGGAGGAGAAGTTGGACGAGTCGTACGGCTCGACGTGATTGAAAAGCTCGGTAAAAAAAACGGCAAAAAATTCAAAGAGGAAAAAATTGTGTTTAGACAGCTAGGATAGATCTTAGAGCTGCATGCATTTATATCGAGTTGTAACGAAAGTGTGATGGCCGTAAGAAAAAAAAAACTTTATGCACGAAACGTTTCGATCGCAAGTGTACCGTACCTTATCTTTGCACGCTGAAAGTAGT ]




>consensus_469#0
GGTGCAGTGCATTTTTTTTTTTATTAATAATCCAACGTGCTGCCGAGTAATATATTCATA
GCAATTTACATTGAAATGTCACGAAAGTTGCATTAATAACGTTCGAGAACCGAGTTTCTT
CGCAACAATTGGATAAAGCTTTGAGCAATTGTATATGAGAAACTGTAGTGCTGAGATGGT
TGATTGTCTTTTAAACGCCTCTCGTTTATCAGTGAGTTTTAGAGCAATTCCAAAGGCACG
ATAGTTCCGATAATTTATAAGAATTTGGGTAAAATCGTTATTTAACCCGTTAATCCTTTT
TAAACTCAGCACTTTTGATGGAGCATAGCTCCGGTCCTCTAAACATTTAAAACGCATACG
TAAAAAAGACGTAAAAACGATGGAAAGCAGAGGAGGAGAAGTTGGACGAGTCGTACGGCT
CGACGTGATTGAAAAGCTCGGTAAAAAAAACGGCAAAAAATTCAAAGAGGAAAAAATTGT
GTTTAGACAGCTAGGATAGATCTTAGAGCTGCATGCATTTATATCGAGTTGTAACGAAAG
TGTGATGGCCGTAAGAAAAAAAAAACTTTATGCACGAAACGTTTCGATCGCAAGTGTACC
GTACCTTATCTTTGCACGCTGAAAGTAGTA

consensusID : consensus_469#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 201
fasta sequence 
                              [CCTTATCTTTGCACGCTGAAAGTAGTATTATCTTTTTACGTGCGNTATACGTTCGATCGACGAAATCGATATCGGTTCAAGATTCGATAGAGGTTAGGAGCTACTGATATGTTGATTATATCTAGCATAGCGTTCGACATGGGAATGAAAGCTGAGTATCCCTGACCTGACCGCTAAAAATCTGCCCCCTTGATTGCTTCA]

[+] EMBL BI517010             [CCTTATCTTTGCACGCTGAAAGTAGTATTATCTTTTTACGTGCGNTATACGTTCGATCGACGAAATCGATATCGGTTCAAGATTCGATAGAGGTTAGGAGCTACTGATATGTTGATTATATCTAGCATAGCGTTCGACATGGGAATGAAAGCTGAGTATCCCTGACCTGACCGCTAAAAATCTGCCCCCTTGATTGCTTCA]




>consensus_469#1
CCTTATCTTTGCACGCTGAAAGTAGTATTATCTTTTTACGTGCGNTATACGTTCGATCGA
CGAAATCGATATCGGTTCAAGATTCGATAGAGGTTAGGAGCTACTGATATGTTGATTATA
TCTAGCATAGCGTTCGACATGGGAATGAAAGCTGAGTATCCCTGACCTGACCGCTAAAAA
TCTGCCCCCTTGATTGCTTCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_469#0      GGTGCAGTGCATTTTTTTTTTTATTAATAATCCAACGTGCTGCCGAGTAATATATTCATA 60
consensus_469#1      ------------------------------------------------------------
                                                                                 

consensus_469#0      GCAATTTACATTGAAATGTCACGAAAGTTGCATTAATAACGTTCGAGAACCGAGTTTCTT 120
consensus_469#1      ---CCTTATCTTTGCACGCT--GAAAGTAGTATTATCTTTTTACGTGCGNTATACGTTCG 55
                          ***  **   * *    ****** * ****      * ** *         *   

consensus_469#0      CGCAAC-AATTGGATAAAGCTTTGAGCAATTGTATATGAGAAACTGTAGTGCTGAGATGG 179
consensus_469#1      ATCGACGAAATCGATATCGGTTCAAG--ATTCGATA-GAGGTTAGGAGCTACTGATATG- 111
                       * ** ** * ****  * **  **  ***  *** ***     *   * **** *** 

consensus_469#0      TTGATTGTCTTTTAAACGCCTCTCGTTTATCAGTGAGTTTTAGAGCAATTCCAAAGGCAC 239
consensus_469#1      TTGATTATATCTAGCATAGCGTTCG---ACATGGGAATGAAAGCTGAGTATCCCTGACCT 168
                     ****** * * *   *   *  ***   *   * ** *   **   * *  *   * *  

consensus_469#0      GATAGTTCCGATAATTTATAAGAATTTGGGTAAAATCGTTATTTAACCCGTTAATCCTTT 299
consensus_469#1      GACCGCT--AAAAATCTGCCC---CCTTGATTGCTTCA---------------------- 201
                     **  * *   * *** *         * * *    **                       

consensus_469#0      TTAAACTCAGCACTTTTGATGGAGCATAGCTCCGGTCCTCTAAACATTTAAAACGCATAC 359
consensus_469#1      ------------------------------------------------------------
                                                                                 

consensus_469#0      GTAAAAAAGACGTAAAAACGATGGAAAGCAGAGGAGGAGAAGTTGGACGAGTCGTACGGC 419
consensus_469#1      ------------------------------------------------------------
                                                                                 

consensus_469#0      TCGACGTGATTGAAAAGCTCGGTAAAAAAAACGGCAAAAAATTCAAAGAGGAAAAAATTG 479
consensus_469#1      ------------------------------------------------------------
                                                                                 

consensus_469#0      TGTTTAGACAGCTAGGATAGATCTTAGAGCTGCATGCATTTATATCGAGTTGTAACGAAA 539
consensus_469#1      ------------------------------------------------------------
                                                                                 

consensus_469#0      GTGTGATGGCCGTAAGAAAAAAAAAACTTTATGCACGAAACGTTTCGATCGCAAGTGTAC 599
consensus_469#1      ------------------------------------------------------------
                                                                                 

consensus_469#0      CGTACCTTATCTTTGCACGCTGAAAGTAGTA 630
consensus_469#1      -------------------------------


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)