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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 790 fasta sequence
[CGAATAGTGATTCTGCATAAAATACAATTTTGTTACAAAATAAAAGAAACAAAACTTTAATAATGGTCCCACAACTTCAAAAACGTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAATATTTTAAAGATACATAAATGAAAG-AAAAAAAAAAAAAGAAAGAAATTTCTATACTTTATTAAAACTGTCATTTATGTAAAAATATTACATTTTTTAAAACTAAAAACTTGTTTTGTAATAAACATGGTATATGTAATTTAAAATCGTAATATTAATTATA]
[+] EMBL BI516686 [CGAATAGTGATTCTGCATAAAATACAATTTTGTTACAAAATAAAAGAAACAAAACTTTAATAATGGTCCCACAACTTCAAAAACGTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGNCTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTC ]
[+] EMBL BI510747 [ CATAAAATACAATTTTGTTACAAAATAAAAGAAACAAAACTTTAATAATGGTCCCACAACTTCAAAAACGTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATT ]
[+] EMBL BI506758 [ CCACAACTTCAAAAACGTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTNNNTTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTAT ]
[+] EMBL BI513698 [ GTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGNTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAG ]
[+] EMBL BI509088 [ GTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAATATTTTAAAGATACATAAATGAAAGAAAAAAAAAAAAAAGAAAGAAATTTCTATACTTTATTAAAACTGTCATTTAT ]
[+] EMBL BI514377 [ GTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTNNNCTATTTTTCTATCCATTNGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACA ]
[+] EMBL BI517205 [ GAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTAT ]
[+] EMBL BI512083 [ GAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGA ]
[+] EMBL BI511543 [ CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAA ]
[+] EMBL BI513417 [ CTGCAGTTGTGAATGGNGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGNCTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATNAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGANNNAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTAC ]
[+] EMBL BI517017 [ CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAANNGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCNNTTGGGAGNTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTA ]
[+] EMBL BI515590 [ CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAG ]
[+] EMBL BI508304 [ TGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAA ]
[+] EMBL BI511116 [ AGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAA ]
[+] EMBL BI514212 [ GAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCNNTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCNNGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAA ]
[+] EMBL BI514438 [ GAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAA ]
[+] EMBL BI503591 [ GAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAATATTTTAAAGATACATAAATGAAAG AAAAAAAAAAAAANNNNGAAATTTCTATACTTTATTAAAACTGTCATTTATGTAAAAATATTACATTTTTTAAAACTAAAAACTTGTTTTGTAATAAACATGGTATATGTAATTTAAAATCGTAATATTAATTATA]
[+] EMBL BI511464 [ GAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAATA ]
[+] EMBL BI510827 [ TAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTA ]
[+] EMBL BI513008 [ AAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCNNGAAAGAAAACTATGAAACCTGATGTAATTGGTTCTAAAGAATATTTTAAAGATACATAAATGAAAG AAAGAAAAAAAAAGAAAGAAATTTCT ]
consensusID : consensus_5#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 466 fasta sequence
[CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTGTACGTATTTTAATTCATAATTTTGTATGTGTATTTAATGATATAATTTTTTAATTATGTATCATATGTCAAAAAATGATAATTTATTTTGCAGTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTA]
[+] EMBL BI515125 [CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTGTACGTATTTTAATTCATAATTTTGTATGTGTATTTAATGATATAATTTTTTAATTATGTATCATATGTCAAAAAATGATAATTTATTTTGCAGTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTA]
consensusID : consensus_5#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 165 fasta sequence
[GATCGAGCTGATGAATTTGAACGAATTGGTTGTAAACTCATNGCAGCATNGACTNATTCTCACNTCAGTCATTTAGNANGGGNNNACACNCCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCNGATAAAAGTTANNGGNGTAGGGCAGGG]
[-] EMBL BG101596 [GATCGAGCTGATGAATTTGAACGAATTGGTTGTAAACTCATNGCAGCATNGACTNATTCTCACNTCAGTCATTTAGNANGGGNNNACACNCCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCNGATAAAAGTTANNGGNGTAGGGCAGGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5#1 CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATC 60
consensus_5#2 ------------------------------------------------------------
consensus_5#0 --CGAATAGTGATTCTGCA--TAAAATACAATTTTGTTACAAAATAAAAGAAACAAAACT 56
consensus_5#1 TTGTT--CTATTTTTCTATCCATTAGACTTGTACGTATTTTAATTCATAATTTTGT-ATG 117
consensus_5#2 ------------------------------------------------------------
consensus_5#0 TTAATAATGGTCCCACAACTTCAAAAACGTGCACCTGATTTTCGAGGTACTGCAGTTGTG 116
consensus_5#1 TGTATTTAATGATATAATTTTTTAATTATGTATCATATGTCAAAAAATGATAATTTATTT 177
consensus_5#2 ------------------------------------------------------------
consensus_5#0 AATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTT 176
consensus_5#1 TGCAGT------------ACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGT 225
consensus_5#2 ------------------------------------------------------GATCGA 6
consensus_5#0 TTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGT 236
*****
consensus_5#1 GCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTC 285
consensus_5#2 GCTGATGAATTTGAACGAATTGGTTGTAAACTCATNGCAGCATNGACTNATTCTCACNTC 66
consensus_5#0 GCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTC 296
**************** ****************** ******* *** ******** **
consensus_5#1 AGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATT 345
consensus_5#2 AGTCATTTAGNANGGGNNNACACNCCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATT 126
consensus_5#0 AGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATT 356
********** * *** **** ************************************
consensus_5#1 CCTCTTCTTGCTGATAAAAGTT-CTAAAATCGCACGTGATTATGGCGTACTTGATGAAGA 404
consensus_5#2 CCTCTTCTTGCNGATAAAAGTTANNGGNGTAGGGCAGGG--------------------- 165
consensus_5#0 CCTCTTCTTGCTGATAAAAGTT-CTAAAATCGCACGTGATTATGGCGTACTTGATGAAGA 415
*********** ********** * * * *
consensus_5#1 AAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAAT 464
consensus_5#2 ------------------------------------------------------------
consensus_5#0 AAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAAT 475
consensus_5#1 TA---------------------------------------------------------- 466
consensus_5#2 ------------------------------------------------------------
consensus_5#0 TACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGC 535
consensus_5#1 ------------------------------------------------------------
consensus_5#2 ------------------------------------------------------------
consensus_5#0 ATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAA 595
consensus_5#1 ------------------------------------------------------------
consensus_5#2 ------------------------------------------------------------
consensus_5#0 AACTATGAAACCTGATGTAGTTGGTTCTAAAGAATATTTTAAAGATACATAAATGAAAGA 655
consensus_5#1 ------------------------------------------------------------
consensus_5#2 ------------------------------------------------------------
consensus_5#0 AAAAAAAAAAAAGAAAGAAATTTCTATACTTTATTAAAACTGTCATTTATGTAAAAATAT 715
consensus_5#1 ------------------------------------------------------------
consensus_5#2 ------------------------------------------------------------
consensus_5#0 TACATTTTTTAAAACTAAAAACTTGTTTTGTAATAAACATGGTATATGTAATTTAAAATC 775
consensus_5#1 ---------------
consensus_5#2 ---------------
consensus_5#0 GTAATATTAATTATA 790
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |