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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_573#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1050 fasta sequence
[TGTTGGAGCGGCCTCTTCTATACAAATACGTCATTTGTATAGAAGAGGCCTGCTNNNCATCGTTGCTGAATAGGTCGATAAATAGTTTTAGTACAGAATGAGGTGGCGACGGTTCGTGATCGAATATTCGCACAGGATCCTCTTCTCTATTAAATAAAAGTAAGATCTTTTCAGTAAAATTTTTTGCCACTGTTCTTTCCTTTAACGCATTCAAAACTATATTTTCCGAGTTAGTGAATTGTAAATTGTATGATAATATTAAATTTACAAATAAATCCGGAATTTGATCTTCCAAGTCCATATCAGGAGGATTTTCTATTAAATCCAAAATAAATGTTATAAAATCTGGACCTAATTGTTCCAAATGTGTAACTGGCATAGGTTCACCCATTGAAAAAATCATAGTAAGTAATAATGAAGAATAATTTAATTTTGTTACATTTCTGGAATTACTCCTCATATCTCTTGCTAATTCCATAGGTAATATACTATTTAACATTATAGTTAAGATAACAGAATCTAAACTACACATTACTCCAAATGATTGCAAGAGTAATTGCCTAATAGTCCATCTTGGTTCCATTTGATAATATTGTATCAGTATATTAACTCCATTATATTGATTCTGCTGTAAAACATATCTAGATACGTTTGCATCTGCATTGGTCAATATAGAAGTAAGTTCCTTTATATAATCAACAATAATAGATTCATCTTCATAAAGCATCCAATTTCTCTGTTGAGAATCTTCTTTACAAGAAGTAAGCTCTGTAAAAATCACTTTCAATCTATTAGCATCATATGTTTCCTCTATGCTCATTTGTGATACAGTAAATGGTGTTTCTAATTGATGCAATAATGCATCAAAATAATGGCTCACATTTTGAGGCAATAATTGTTGCAGGCCAGAAACAACTACTGTTACTGCTACTTTTGACATTTCATAACTTAATTGAGTATTCCTACGTACTTGGTCAAGTAATTGATAAGCAGTATGAGAGTTAATATCACATAATGAAGTTTTTTTCTTTATAGGTGAACTAATGGGGG]
[+] EMBL BI505830 [TGTTGGAGCGGCCTCTTCTATACAAATACGTCATTTGTATAGAAGAGGCCTGCTNNNCATCGTTGCTGAATAGGTCGATAAATAGTTTTAGTACAGAATGAGGTGGCGACGGTTCGTGATCGAATATTCGCACAGGATCCTCTTCTCTATTAAATAAAAGTAAGATCTTTTCAGTAAAATTTTTTGCCACTGTTCTTTCCTTTAACGCATTCAAAACTATATTTTCCGAGTTAGTGAATTGTAAATTGTATGATAATATTAAATTTACAAATAAATCCGGAATTTGATCTTCCAAGTCCATATCAGGAGGATTTTCTATTAAATC ]
[-] EMBL BI510207 [ CTTTTCAGTAAAATTTTTTGCCACTGTTCTTTCCTTTAACGCATTCAAAACTATATTTTCCGAGTTAGTGAATTGTAAATTGTATGATAATATTAAATTTACAAATAAATCCGGAATTTGATCTTCCAAGTCCATATCAGGAGGATTTTCTATTAAATCCAAAATAAATGTTATAAAATCTGGACCTAATTGTTCCAAATGTGTAACTGGCATAGGTTCACCCATTGAAAAAATCATAGTAAGTAATAATGAAGAATAATTTAATTTTGTTACATTTCTGGAATTACTCCTCATATCTCTTGCTAATTCCATAGGTAATATACTATTTAACATTATAGTTAAGATAACAGAATCTAAACTACACATTACTCCAAATGATTGCAAGAGTAATTGCCTAATAGTCCATCTTGGTTCCATTTGATAATATTGTATCAGTATATTAACTCCATTATATTGATTCTGCTGTAAAACATATCTAGATACGTTTGCATCTGCATTGGTCAATATAGAAGTAAGTTCCTTTATATAATCAACAATAATAGATTCATCTTCATAAAGCATCCAATTTCTCTGTTGAGAATCTTCTTTACAAGAAGTAAGC ]
[-] EMBL BI517098 [ TTGTATCAGTATATTAACTCCATTATATTGATTCTGCTGTAAAACATATCTAGATACGTTTGCATCTGCATTGGTCAATATAGAAGTAAGTTCCTTTATATAATCAACAATAATAGATTCATCTTCATAAAGCATCCAATTTCTCTGTTGAGAATCTTCTTTACAAGAAGTAAGCTCTGTAAAAATCACTTTCAATCTATTAGCATCATATGTTTCCTCTATGCTCATTTGTGATACAGTAAATGGTGTTTCTAATTGATGCAATAATGCATCAAAATAATGGCTCACATTTTGAGGCAATAATTGTTGCAGGCCAGAAACAACTACTGTTACTGCTACTTTTGACATTTCATAACTTAATTGAGTATTCCTACGTACTTGGTCAAGTAATTGATAAGCAGTATGAGAGTTAATATCACATAATGAAGTTTTTTTCTTTATAGGTGAACTAATGGGGG]
consensusID : consensus_573#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 602 fasta sequence
[TCATTCTGTACTAAAACTATTTATCGACCTATTCAGCAACGATGTTACAGCAGGCCTCTTCTATACAAATGACGTATTTGTTTTAATCGATATTATATTGCGTCAATTATACGATATGTTTCCCGGTGATAAGCGTAGACAATATTTGGAATTATGTCGAAGAGTATTACGTACGTCGAGCTATAATGAACATAAATATCGTTCAGAAGATCTCTTGAAATGCTTTACAAGAATATTCTGTGAAGAAACTGGAGAGAGTCAAGAAGATCAACAATCAGTGCGTGAAATTAGCAATGAATTTCCACATTTGTTTAAAATGTGACCTTTATCGTCGCCCTCCGATAATAAAAACTTGGAGGATGATGATTTGCAAACTCTTATATAAGGTTCCGGTACGTACAATGACGAAGAATGACGAAGAATCAAGTTACCGATCAAAAAAATTTCTTTATTTTTCTAATACTATTTTGCAAATATTTTGCTCAGCCAATAATATATCAAAGACGCACACACAATTCGCAGAACTTTCAAGTGCATGAAATTATATTTTTCCCGTTTTAATCTTTCTAGTAAACATTACTATTTATTCTGATTAAAAAAAA]
[+] EMBL BI510439 [TCATTCTGTACTAAAACTATTTATCGACCTATTCAGCAACGATGTTACAGCAGGCCTCTTCTATACAAATGACGTATTTGTTTTAATCGATATTATATTGCGTCAATTATACGATATGTTTCCCGGTGATAAGCGTAGACAATATTTGGAATTATGTCGAAGAGTATTACGTACGTCGAGCTATAATGAACATAAATATCGTTCAGAAGATCTCTTGAAATGCTTTACAAGAATATTCTGTGAAGAAACTGGAGAGAGTCAAGAAGATCAACAATCAGTGCGTGAAATTAGCAATGAATTTCCACATTTGTTTAAAATGTGACCTTTATCGTCGCCCTCCGATAATAAAAACTTGGAGGATGATGATTTGCAAACTCTTATATAAGGTTCCGGTACGTACAATGACGAAGAATGACGAAGAATCAAGTTACCGATCAAAAAAATTTCTTTATTTTTCTAATACTATTTTGCAAATATTTTGCTCAGCCAATAATATATCAAAGACGCACACACAATTCGCAGAACTTTCAAGTGCATGAAATTATATTTTTCCCGTTTTAATCTTTCTAGTAAACATTACTATTTATTCTGATTAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_573#0 TGTTGGAGCGGCCTCTTCTATACAAATACGTCATTTGTATAGAAGAGGCCTGCTNNNCAT 60
consensus_573#1 ------------------------------------------------------------
consensus_573#0 CGTTGCTGAATAGGTCGATAAATAGTTTTAGTACAGAATGAGGTGGCGACGGTTCGTGAT 120
consensus_573#1 ------------------------------------------------------------
consensus_573#0 CGAATATTCGCACAGGATCCTCTTCTCTATTAAATAAAAGTAA-GATCTTTTCAGTAAAA 179
consensus_573#1 -------------------TCATTCTGTACTAAAACTATTTATCGACCTATTCAGCAACG 41
**** ** **** * ** ** ** ***** **
consensus_573#0 TTTTTTGCCACTGTTCTTTCCTTTAACGCATTCAAAACTATATTTTCCGAGTTAGTGAAT 239
consensus_573#1 ATGTT-ACAGCAGGCCTCTTCTATACAAATGACGTATTTGTTTTAATCGATATTATATTG 100
* ** * * * ** * ** ** * * * * ** *** * *
consensus_573#0 TGTAAATTGTATGATAATATTAAATTTACAAATAAATCCGGAATTTGATCTTCCAAGTCC 299
consensus_573#1 CGTCAATTATACGATATGTTT---CCCGGTGATAAGCGTAGA---CAATATTTGGAATT- 153
** **** ** **** ** **** ** ** ** * *
consensus_573#0 ATATC-AGGAGGATTTTCTAT-TAAATCCAAAATAAATGTTA-TAAAATCTGGACCTAAT 356
consensus_573#1 ATGTCGAAGAGTATTACGTACGTCGAGCTATAATGAACATAAATATCGTTCAGA--AGAT 211
** ** * *** *** ** * * * * *** ** * * ** * ** **
consensus_573#0 TGTTCCAAATGTGTAACTGGCATAGGTTCACCCATTGAAAAAATCATAGTAAGTAATAAT 416
consensus_573#1 CTCTTGAAATGCTTTACAAGAAT------ATTCTGTGAAGAAACTGGAGAGAGTCAAGAA 265
* ***** * ** * ** * * **** *** ** *** * *
consensus_573#0 GAAGAATAATTTAATTTTGTTACATTTCTGGAATTACTCCTCATATCTCTTGCTAATTCC 476
consensus_573#1 GATCAACAATC--AGTGCGTGAAATT--AGCAATGAATTTCCACATTTGTTTAAAATGTG 321
** ** *** * * ** * *** * *** * * ** ** * ** ***
consensus_573#0 ATAGGTAATAT-ACTATTTAACATTATAGTTAAGATAACAGAATCTAAACTACACATTAC 535
consensus_573#1 ACCTTTATCGTCGCCCTCCGATAATAAA---AACTTGGAGGATGATGATTTGCAAACTCT 378
* ** * * * * * ** * ** * ** * * * ** * *
consensus_573#0 TCCAAATGATTGCAAGAGTAATTGCCTAATAGTCCATCTTGGTTCCATTTGATAATATTG 595
consensus_573#1 TATATAAGGTTCCGGTA-----CGTACAATGACGAAGAATGACGAAGAATCAAGTTACCG 433
* * * * ** * * * *** * ** * * ** *
consensus_573#0 TATCAGTATATTAACTCCATTATATTGATTCTGCTGTAAAACATATCTAGATACGTTTGC 655
consensus_573#1 -ATCAAAAAAATTTCTTTATTTTTCTAATACTATTTTGCAA-ATAT---------TTTGC 482
**** * * * ** *** * * ** ** * * ** **** *****
consensus_573#0 ATCTGCATTGGTCAATATAGAAGTAAGTTCCTTTATATAATCAACAATAATAGATTCATC 715
consensus_573#1 -------TCAGCCAATAATATATCAAAGACGCACACACAATTCGCAGAACT---TTCAAG 532
* * ***** * ** * * * *** ** * * ****
consensus_573#0 TTCATAAAGCATCCAATTTCTCTGTTGAGAATCTTCTTTACAAGAAGTAAGCTCTGTAAA 775
consensus_573#1 TGCATGAA--ATTATATTTTTCCCGTTTTAATCTTTCTAGTAAACATTACTATTTATTCT 590
* *** ** ** **** ** * ****** * ** * ** * * *
consensus_573#0 AATCACTTTCAATCTATTAGCATCATATGTTTCCTCTATGCTCATTTGTGATACAGTAAA 835
consensus_573#1 GATTAAAAAAAA------------------------------------------------ 602
** * **
consensus_573#0 TGGTGTTTCTAATTGATGCAATAATGCATCAAAATAATGGCTCACATTTTGAGGCAATAA 895
consensus_573#1 ------------------------------------------------------------
consensus_573#0 TTGTTGCAGGCCAGAAACAACTACTGTTACTGCTACTTTTGACATTTCATAACTTAATTG 955
consensus_573#1 ------------------------------------------------------------
consensus_573#0 AGTATTCCTACGTACTTGGTCAAGTAATTGATAAGCAGTATGAGAGTTAATATCACATAA 1015
consensus_573#1 ------------------------------------------------------------
consensus_573#0 TGAAGTTTTTTTCTTTATAGGTGAACTAATGGGGG 1050
consensus_573#1 -----------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |