|
These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1455 fasta sequence
[CGTTCGTCCGTTTTTATTCGTTATTCTTTTTTATTTTTTTTTTTTTTCTTTTTCTTTTTTCTTCCTCGTTTCTTTTCATACTTAACAATACAATACTTGCGGGAACAATTGTCAACGTAGGAAATAAATTTATTTCTTACGTTGAAAATTAGTATGTACAAGTAACAAGAAGATTGGTTATCAATCACATGGATCTTGAACGTTAATACCTTGTTAATTATAAATGGTTCTATAATATACAATG-ATATATATATATATATGTATATATAATTGTATATAATAATTTGCTAAATTTGTACCATCGATTGGTGGACGTCTGG-TAGG-CGAAAAAGATATAAAATATTCGTGGAATGACGCGTAGATATTAAATCTAA-GACTTTTACTCTCTACACCGCCTACGAAACATAATTGAA-CTTTGGTCTCGTGAGTTTCTAGCTAAGTATATATATCGAAATTCGATTAAATTATAAGAAATAACCTATAACCTCGTTAACGTAATTATTTTGCTTTAATTAGTCGTTTGATTAATCGGTAATTACGCTACGTATAATTCTAATGTTAAATACATTCAAAATTATTGAGCACGGTTGGTTGAATGAACCTCTCTCTTTCTCTCTCTTCATGTTTCATTTCTTG-TGCTCTCGTTCGATACGAAGATATAAAGGGTATAGCACGTAATTTCTAGAGTATCGTAACGATATGAAATACCGTGATAAATACGTGCAATTATCATGCAATTTAATTAACAAAGAGAAGAAGATAACGATAATCAACGAGTGTAGATTTAAAATGATGGATCGTGAAAAGTCTATCAACGTATCTTATCGATTATTATCGTAGGTTACAATGGTTGGTATATCGTTTCGAGAGCGT--ATAATATATCGTCTACGAGAAAGGATCATTGCACATGGCGCACGATTAATAATTATTTCCAATCAGTTTGAAACAAGACGACACAGCTTGAATCCGTATTAATCAAACACGCCTGCTTCTTCGAATTTCGCTAATCTCTCGGCCATCACCTTCCGATACATGGGATTCTTGGTCCCGGGATAATCGAACGTGTCTCTCTTCTTGATCAGCTCGTCGATACTCACCACCTGGGATTTATCCATCAGGGTGAATGGCAATACGGTAGCCGCGGCTACCATCCCCCACGCTATCCTTTCTCTCATGTATCTTTTTATATCTTTTACCGTGGGTGGCGCCGTTTTGCAACCTAGCCTCTTCATCGTGCTGGTCAACGTATTTACGTATTCCTCGATCAGATTCTCGGTGTTCACTTCGTTTTGGACGGTCGCGTTTAAAAAGTAGAGCAGGTCGATCGCCGGTGAAGTGTAGATCGACATTTGGTAATCCACGAACACGTGTTGGACAGGCTTTGAATTCTCGTCGTATCGATACATCATATTGTTCGTCCAGGAATCACCGTGATTAATAACGTTGAACTCGTCG]
[+] EMBL BE844544 [CGTTCGTCCGTTTTTATTCGTTATTCTTTTTTTTTTCTTTTTTTTTTCTTTTTCTTTTTTCTTCCTCGTTTCTTTTCATACTTAACAATACAATACTTGCGGGAACAATTGTCAACGTAGGAAATAAATTTATTTCTTACGTTGAAAATTAGTATGTACAAGTAACAAGAAGATTGGTTATCAATCACATGGATCTTGAACGTTAATACCTTGTTAATTATAAATGGTTCTATAATATACAATGTATATATATATATATATGTATATATAATTGTATATAATAATTTGCTAAATTTGTACCATCGATTGGTGGACGTCTGG TAGG CGAAAAAGATATAAAATATTCGTGGAATGACGCGTAGATATTAAATCTAA GACTTTTACTCTCTACACCGCCTACGAAACATAATTGAA CTTTGGTCTCGTGAGTTTCTAGCTAAGTATATATATCGAAATTCGATTAAATTATAAGAAATAACCTATAACCTCGTTAACGTAATTATTTTGCTTTAATTAGTCGTTTGATTAATCGGTAATTACGCTACGTATAATTCTAATGTTAAATACATTCAAAATTATTGAGCA ]
[+] EMBL BE844573 [ ATTCTTTTTTTTTTTCTTTTTCTTTTTTCTTCCTCGTTTCTTTTCATACTTAACAATACAATACTTGCGGGAACAATTGTCAACGTAGGAAATAAATTTATTTCTTACGTTGAAAATTAGTATGTACAAGTAACAAGAAGATTGGTTATCAATCACATGGATCTTGAACGTTAATACCTTGTTAATTATAAATGGTTCTATAATATACAATG TATATATATATATATGTATATATAATTGTATATAATAATTTGCTAAATTTGTACCATCGATTGGTGGACGTCTGG TAGG CGAAAAAGATATAAAATATTCGTGGAATGACGCGTAGATATTAAATCTAA GACTTTTACTCTCTACACCGCCTACGAAACATAATTGAA CTTTGGTCTCGTGAGTTTCTAGCTAAGTATATAT CCGAAATTCGATTAAATTATAAGAAATAACCTATAACCTCGTTAACGTAATTATTTTGCTTTAATTAGTCGTTTGATTAA ]
[+] EMBL BE844317 [ TCTTTTTTTTTTTTCTTTTTCTTTTTTCTTCCTCGTTTCTTTTCATACTTAACAATACAATACTTGCGGGAACAATTGTCAACGTAGGAAATAAATTTATTTCTTACGTTGAAAATTAGTATGTACAAGTAACAAGAAGATTGGTTATCAATCACATGGATCTTGAACGTTAATACCTTGTTAATTATAAATGGTTCTATAATATACAATG TATATATATATATATGTATATATAATTGTATATAATAATTTGCTAAATTTGTACCATCGATTGGTGGACGTCTGG TAGG CGAAAAAGATATAAAATATTCGTGGAATGACGCGTAGATATTAAATCTAA GACTTTTACTCTCTACACCGCCTACGAAACATAATTGAA CTTTGGTCTCGTGAGTTTCTAGCTAAG TATATATTGAAATTCGATTAAATTATAAGAAATAACCTATAACCTCGTTAACGTAATTATTTTGCTTTAATTAGTCGTTTGATTAAT ]
[+] EMBL BE844599 [ TTTTTTTTCTTTTTCTTTTTTCTTCCTCGTTTCTTTTCATACTTAACAATACAATACTTGCGGGAACAATTGTCAACGTAGGAAATAAATTTATTTCTTACGTTGAAAATTAGTATGTACAAGTAACAAGAAGATTGGTTATCAATCACATGGATCTTGAACGTTAATACCTTGTTAATTATAAATGGGTCTATAATATACA ATATATATATATATATGTATATATAATTGGATATAATAATTTGCTAAATTTGTACCATCGATTGGTGGACGTCTGGATAGGCCGAAAAAGATATAAAATATTCGTGGAATGACGCGTAGATATTAAATCTAAGGACTTTTACTCTCTACACCGCCTACGAAACATAATTGAACCTTTGGTCTCCGGAGTTTCTAGCTAAG GTCTATATCGAAACT ]
[+] EMBL BE844510 [ AACGTAGGAAATAAATTTATTTCTTACGTTGAAAATTAGTATGTACAAGTAACAAGAAGATTGGTTATCAATCACATGGATCTTGAACGTTAATACCTTGTTAATTATAAATGGTTCTATAATATACAATGTATATATATATATATATGTATATATAATTGTATATAATAATTTGCTAAATTTGTACCATCGATTGGTGGACGTCTGG TAGG CGAAAAAGATATAAAATATTCGTGGAATGACGCGTAGATATTAAATCTAA GACTTTTACTCTCTACACCGCCTACGAAACATAATTGAA CTTTGGTCTCGTGAGTTTCTAGCTAAGTATATATATCGAAATTCGATTAAATTATAAGAAATAACCTATAACCTCGTTAACGTAATTATTTTGCTTTAATTAGTCGTTTGATTAATCGGTAATTACGCTACGTATAATTCTAATGTTAAATACATTCAAAATTATTGTGCACGGTTGGTTGAATGAACCTCTCTCTTTCTCTCTCTTCATGTTTCATTTCTTG TGCTCTCGTTCGATACGAAGATATAAAGGGTATAGTACGTAATTTCTAGAGTATCGTAACGATATGAAATACCGTGATAAATACG ]
[-] EMBL BE844572 [ CTAATGTTAAATACATTCAAAATTATTGCGCGCGGTTGGTTGAATGAACCTCTCTCTTTCTCTCTCTTCATGTTTCATTTCTTGTTGCTCTCGTTCGATACGAAGATATAAAGGGTATAGCACGTAATTTCTAGAGTATCGTAACGATATGAAATACCGTGATAAATACGTGCAATTATCATGCAATTTAATTAACAAAGAGAAGAAGATAACGATAATCAACGAGTGTAGATTTAAAATGATGGATCGTGAAAAGTCTATCAACGTATCTTATCGATTATTTTCGTAGGTTACAATGGTTGGTATATCGTTGCGAGAGCGTCGATAATATATCGTCTACGAGAAAGGATCATTGCACATGGCGCACGATTAATAATTATTTCCAATCAGTTTGAAACAAGACGACACAGCTTGAATCCGTATTAATCAAACACGCCTGCTTCTTCGAATTTCGCTAATCTCTCGGCCATCACCTTCCGATACATGGGATTCTTGGTCCCGGGATAATCGAACGTGTCTCTCTTCTTGATCAGCTCGTCGATACTCACCACCTGGGATTTATCCATCAGGGTGA ]
[-] EMBL BI516159 [ AGATTTAAAATGATGGATCGTAAAAAGTCTATCAACGTATCTTATCGATTATTATCGTAGGTTACAATGATTGGTATATCGTTTCGAGAGCGT ATAATATATCGTCTACGAGAAAGGATCATTGCACATGGCGCACGATTAATAATTATTTCCAATCAGTTTGAAACAAGACGACACAGCTTGAATCCGTATTAATCAAACACGCCTGCTTCTTCGAATTTCGCTAATCTCTCGGCCATCACCTTCCGATACATGGGATTCTTGGTCCCGGGATAATCGAACGTGTCTCTCTTCTTGATCAGCTCGTCGATACTCACCACCTGGGATTTATCCATCAGGGTGAATGGCAATACGGTAGCCGCGGCTACCATCCCCCACGCTATCCTTTCTCTCATGTATCTTTTTATATCTTTTACCGTGGGTGGCGCCGTTTTGCAACCTAGCCTCTTCATCGTGCTG ]
[-] EMBL BI513856 [ TTGGTATATCGTTTCGAGAGCGT ATAATATATCGTCTACGAGAAAGGATCATTGCACATGGCGCACGATTAATAATTATTTCCAATCAGTTTGANNNAAGACGACACAGCTTGAATCCGTATTAATCAAACACGCCTGCTTCTTCGAATTTCGCTAATCNNNCGGCCATCACCTTCCGATACATGGGATTCTTGGTCCCGGGATAATCGAACGTGTCTCTCTTCTTGATCAGCTCGTCGATACTCACCACCTGGGATTTATCCATCAGGGTGAATGGCAATACGGTAGCCGCGGCTACCATCCCCCACGCTATCCTTTCTCTCATGTATCTTTTTATATCTTTTACCGTGGGTGGCGCCGTTTTGCAACCTAGCCTCTTCATCGTGCTGGTCAACGTATTTACGTATTCCTCGATCAGATTCTCGGTGTTCACTTCGTTTTGGACGGTCGCGTTTAAAAAGTAGAGCAGGTCGATCGCCGGTGAAGTGTAGATCGACATTTGGTAATCCACGAACACGTGTTGGACAGGCTTTGAATTCTCGTCGTATCGATACATCATATTGTTCGTCCAGGAATCACCGTGATTA ]
[-] EMBL BE844318 [ CTCGGCCATCACCTTCCGATACATGGGATTCTTGGTCCCGGGATAATCGAACGTGTCTCTCTTCTTGATCAGCTCGTCGATACTCACCACCTGGGATTTATCCATCAGGGTGAATGGCAATACGGTAGCCGCGGCTACCATCCCCCACGCTATCCTTTCTCTCATGTATCTTTTTATATCTTTTACCGTGGGTGGCGCCGTTTTGCAACCTAGCCTCTTCATCGTGCTGGTCAACGTATTTACGTATTCCTCGATCAGATTCTCGGTGTTCACTTCGTTTTGGACGGTCGCGTTTAAAAAGTAGAGCAGGTCGATCGCCGGTGAAGTGTAGATCGACATTTGGTAATCCACGAACACGTGTTGGACAGGCTTTGAATTCTCGTCGTATCGATACATCATATTGTTCGTCCAGGAATCACCGTGATTAATAACGTTGAACTCGTCG]
[-] EMBL BI513907 [ CAGGGTGAATGGCAATACGGTAGCCGCGGCTACCATCCCCCACGCTATCCTTTCTCTCATGTATCTTTTTATATCTTTTACCGTGGGTGGCGCCGTTTTGCAACCTAGCCTCTTCATCGTGCTGGTCAACGTATTTACGTATTCCTCGATCAGATTCTCGGTGTTCACTTCGTTTTGGACGGTCGCGTTTAAAAAGTAGAGCAGGTCGATCGCCGGTGAAGTGTAGATCGACATTTGGTAATCCACGAACACGTGTTGGACAGGCTTTGAATTCTCGTCGTATCGATACATCATATTGTTCGTCCAGGAATCACCGTGATTA ]
consensusID : consensus_6#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 963 fasta sequence
[TAATCAAAGAATCGGGAGGAAGGAAGACGAAGATAATACCTGCGTGTGTTCGTGTATTTGTGCGTCTGTGTGAGTGTGTGTGTCTAGAGCGAGGGAGAGAAAAAAGAGAGAGAGAGAGGTAGAAACCGATCGAGAGGAAATGAAGGAAAGGGAAAGGGAAGGAAAAAGGGAAAAAAATGGTGGATAAATTGGAATGGTTAAATAACGAATTCGTGCAAAGGGTCCTCCAGTACAATGAGTACGACACCAGCATCAATGTAACGAATATATCCGCGAAACCGGCGACCAGCAAAGGTGACAATTATGCCAGCGACATGTACAGGGTGACCGTGAAATACACGCAGAAGGAGGGCAAGACCAGGGTCAATAAGGAGACGTCGATTGTGTGCAAGTTCGAGCCGTTGGAGGAGGACGCTCGAAGGGAAGCGATCATGTCAATGGGTATCTTCGAGAACGAAATCTTCATGATGTCGAATTCGCTACGAAAGATGCAACAAATGTTGGGCACTCGGCTGGGAGCAAATGTACTTTACTTTAGAATGGAACGGCCGGTTTGTTTGATATTGGAAGACCTTGCTCGTCTAGGATTTCGTATGGCCGATCGTTTCCGTGGTTTAGATTTCGATCATTCCAAACTAACTCTTCAAAGCTTAGGCAAATTTCACGCGGCGTCGGTCGCACTGTGCGAGAAGGAACCCAAATTAAAGACTGTATATCAGAAAGGGATACTGTACGAAGGAATGCCGACCGAATTCAAATTCTTCTTCATCTCCGCAATTAAAGCTCTTGGAGACGATTTGGCAAATTGGCCGCAAGACGTGAAAAGGTATCAGGATAAAGTTAAGAAATTCGCCGAAGTTGTTTACGACCGTGGTATAGCGGCATTGCAACGAAACGACGACGAGTTCAACGTTATTAATCACGGTGATTCCTGGACGAACAATATGATGTATCGATACGACG]
[+] EMBL BI511527 [TAATCAAAGAATCGGGAGGAAGGAAGACGAAGATAATACCTGCGTGTGTTCGTGTATTTGTGCGTCTGTGTGAGTGTGTGTGTCTAGAGCGAGGGAGAGAAAAAAGAGAGAGAGAGAGGTAGAAACCGATCGAGAGGAAATGAAGGAAAGGGAAAGGGAAGGAAAAAGGGAAAAAAATGGTGGATAAATTGGAATGGTTAAATAACGAATTCGTGCAAAGGGTCCTCCAGTACAATGAGTACGACACCAGCATCAATGTAACGAATATATCCGCGAAACCGGCGACCAGCAAAGGTGACAATTATGCCAGCGACATGTACAGGGTGACCGTGAAATACACGCAGAAGGAGGGCAAGACCAGGGTCAATAAGGAGACGTCGATTGTGTGCAAGTTCGAGCCGTTGGAGGAGGACGCTCGAAGGGAAGCGATCATGTCAATGGGTATCTTCGAGAACGAAATCTTCATGATGTCGAATTCGCTACGAAAGATGCAACAAATGTTGGGCACTCGGCTGGGAGCA ]
[+] EMBL BI514372 [ GGTTAAATAACGAATTCGTGCAAAGGGTCCTCCAGTACAACGAGTACGACACCAGCATCAATGTAACGAATATATCCGCGAAACCGGCGACCAGCAAAGGTGACAATTATGCCAGCGACATGTACAGGGTGACCGTGAAATACACGCAGAAGGAGGGCAAGACCAGGGTCAATAAGGAGACGTCGATTGTGTGCAAGTTCGAGCCGTTGGAGGAGGACGCTCGAAGGGAAGCGATCATGTCAATGGGTATCTTCGAGAACGAAATCTTCATGATGTCGAATTCGCTACGAAAGATGCAACAAATGTTGGGCACTCGGCTGGGAGCAAATGTACTTTACTTTAGAATGGAACGGCCGGTTTGTTTGATATTGGA ]
[+] EMBL BI513254 [ ACGAATTCGTGCAAAGGGTCCTCCAGTACAATGAGTACGACACCAGCATCAATGTAACGAATATATCCGCGAAACCGGCGACCAGCAAAGGTGACAATTATGCCAGCGACATGTACAGGGTGACCGTGAAATACACGCAGAAGGAGGGCAAGACCAGGGTCAATAAGGAGACGTCGATTGTGTGCAAGTTCGAGCCGTTGGAGGAGGACGCTCGAAGGGAAGCGATCATGTCAATGGGTATCTTCGAGAACGAAATCTTCATGATGTCGAATTCGCTACGAAAGATGCAACAAATGTTGGGCACTCGGCTGGGAGCAAATGTACTTTACTTTAGAATGGAACGGCCGGTTTGTTTGATATTGGAAGACCTTGCTCGTCTAGGATTTCGTATGGCCGATCGTTTCCGTGGTTTAGATTTCGATCATTCCAAA ]
[+] EMBL BI511713 [ GGTCCTCCAGTACAATGAGTACGACACCAGCATCAATGTAACGAATATATCCGCGAAACCGGCGACCAGCAAAGGTGACAATTATGCCAGCGACATGTACAGGGTGACCGTGAAATACACGCAGAAGGAGGGCAAGACCAGGGTCAATAAGGAGACGTCGATTGTGTGCAAGTTCGAGCCGTTGGAGGAGGACGCTCGAAGGGAAGCGATCATGTCAATGGGTATCTTCGAGAACGAAATCTTCATGATGTCGAATTCGCTACGAAAGATGCAACAAATGTTGGGCACTCGGCTGGGAGCAAATGTACTTTACTTTAGAATGGAACGGCCGGTTTGTTTGATATTGGAAGACCTTGCTCGTCTAGGATTTCGTATGGCCGATCGTTTCCGTGGTTTAGATTTCGATCATTCCAAAC ]
[+] EMBL BI516831 [ AGTACAACGAGTACGACACCAGCATCAATGTAACGAATATATCCGCGAAACCGGCGACCAGCAAAGGTGACAATTATGCCAGCGACATGTACAGGGTGACCGTGAAATACACGCAGAAGGAGGGCAAGACCAGGGTCAATAAGGAGACGTCGATTGTGTGCAAGTTCGAGCCGTTGGAGGAGGACGCTCGAAGGGAAGCGATCATGTCAATGGGTATCTTCGAGAACGAAATCTTCATGATGTCGAATTCGCTACGAAAGATGCAACAAATGTTGGGCACTCGGCTGGGAGCAAATGTACTTTACTTTNNAATGGAACGGCCGGTTTGTTTGATATTGGAAGACCTTGCTCGTCTAGGATTTCGTATGGCCGATCGTTTCCGTGGTTTAGNTTTCGATCATTCCAAACTAACTCTTCAAAGCTTAGGCAAATTTCACGCGGCGTC ]
[+] EMBL BI512594 [ CCGGCGACCAGCAAAGGTGACAATTATGCCAGCGACATGTACAGGGTGACCGTGAAATACACGCAGAAGGAGGGCAAGACCAGGGTCAATAAGGAGACGTCGATTGTGTGCAAGTTCGAGCCGTTGGAGGAGGACGCTCGAAGGGAAGCGATCATGTCAATGGGTATCTTCGAGAACGAAATCTTCATGATGTCGAATTCGCTACGAAAGATGCAACAAATGTTGGGCACTCGGCTGGGAGCAAATGTACTTTACTTTAGAATGGAACGGCCGGTTTGTTTGATATTGGAAGACCTTGCTCGTCTAGGATTTCGTATGGCCGATCGTTTCCGTGGTTTAGATTTCGATCATTCCAAGCT ]
[+] EMBL BE844598 [ GTGCAAGTTCGAGCCGTTGGAGGAGGACGCTCGAAGGGAAGCGATCATGTCAATGGGTATCTTCGAGAACGAAATCTTCATGATGTCGAATTCGCTACGAAAGATGCAACAAATGTTGGGCACTCGGCTGGGAGCAAATGTACTTTACTTTAGAATGGAACGGCCGGTTTGTTTGATATTGGAAGACCTTGCTCGTCTAGGATTTCGTATGGCCGATCGTTTCCGTGGTTTAGATTTCGATCATTCCAAACTAACTCTTCAAAGCTTAGGCAAATTTCACGCGGCGTCGGTCGCACTGTGCGAGAAGGAACCCAAATTAAAGACTGTATATCAGAAAGGGATACTGTACGAAGGAATGCCGACCGAATTCAAATTCTTCTTCATCTCCGCAATTAAAGCTCTTGGAGACGATTTGGCAAATTGGCCGCAAGACGTGAAAAGGTATCAGGATAAAGTTAAGAAATTCGCCGAAGTTGTTTACGACCGTGGTATAGCGGCATTGCAACGAAACGACGACGAGTTCAACGTTATTAATCACGGTGATTCCTGGACGAACAATATGATGTATCGATACGACG]
consensusID : consensus_6#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 570 fasta sequence
[TGTGTTTCGTTCGTCCGTTTTTATTCGTTATTCTTTTTTTTTTCTTTTTCTTTTTTCTTCCTCGTTTCTTTTCATACTTAACAATACAATACTTGCGGGAACAATTGTCAACGTAGGAAATAAATTTATTTCTTACGTTGAAAATTAGTATGTACAAGTAACAAGAAGATTGGTTATCAATCACATGGATCTTGAACGTTAATACCTTGTTAATTATAAATGGTTCTATAATATACAATGTATATATATATATATATGTATATATAATTGTATATAATAATTTGCTAAATTTGTACCATCGATTGGTGGACGTCTGGTAGGCGAAAAAGATATAAAATATTCGTGGAATGACGCGTAGATATTAAATCTAAGACTTTTACTCTCTACACCGCCTACGAAACATAATTGAACTTTGGTCTCGTGAGTTTCTAGCTAAGTATATATATCGAAATTCGATTAAATTATAAGAAATAACCTATAACCTCGTTAACGTAATTATTTTTCTTTAATTAGTCGTTTGATTAATCGGTAATTACGCTACGTATAATTCTAATGTTAAATACATTCAAA]
[+] EMBL BE844359 [TGTGTTTCGTTCGTCCGTTTTTATTCGTTATTCTTTTTTTTTTCTTTTTCTTTTTTCTTCCTCGTTTCTTTTCATACTTAACAATACAATACTTGCGGGAACAATTGTCAACGTAGGAAATAAATTTATTTCTTACGTTGAAAATTAGTATGTACAAGTAACAAGAAGATTGGTTATCAATCACATGGATCTTGAACGTTAATACCTTGTTAATTATAAATGGTTCTATAATATACAATGTATATATATATATATATGTATATATAATTGTATATAATAATTTGCTAAATTTGTACCATCGATTGGTGGACGTCTGGTAGGCGAAAAAGATATAAAATATTCGTGGAATGACGCGTAGATATTAAATCTAAGACTTTTACTCTCTACACCGCCTACGAAACATAATTGAACTTTGGTCTCGTGAGTTTCTAGCTAAGTATATATATCGAAATTCGATTAAATTATAAGAAATAACCTATAACCTCGTTAACGTAATTATTTTTCTTTAATTAGTCGTTTGATTAATCGGTAATTACGCTACGTATAATTCTAATGTTAAATACATTCAAA]
[+] EMBL BE844370 [ CTTTTTCTTTTTTCTTCCTCGTTTCTTTTCATACTTAACAATACAATACTTGCGGGAACAATTGTCAACGTAGGAAATAAATTTATTTCTTACGTTGAAAATTAGTATGTACAAGTAACAAGAAGATTGGTTATCAATCACATGGATCTTGAACGTTAATACCTTGTTAATTATAAATGGTTCT ]
consensusID : consensus_6#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 415 fasta sequence
[CATTCTAAAGTAAAGTACATTTGCTCCCAGCCGAGTGCCCCAACATTTGTTGCATCTTTCGGTAAGCGAATTCGGACATCATGAAGATTTCGTTCTCGAAGATACCCATTGACATGATCGCTTCCCTTCGAGCGTCCTCCTCCAACGGCTCGAACTTGCACACAATCGACGTCTCCTTATTGACCCTGGTCTTGCCCTCCTTCTGCGTGTATTTCACGGTCACCCTGTACATGTCGCTGGCATAATTGTCACCTTTGCTGGTCGCCGGTTTCGCGGATATATTCGTTACATTGATGCTGGTGTCGTACTCGTTGTACTGGAGGACCCTTTGCACGAATTCGTTATTTAACCATTCCAATTTATCCACCATTTTTTTCCCTGCGAGAGATTACTTGTACACAAAAGAAAGAATAAT]
[+] EMBL BE844545 [CATTCTAAAGTAAAGTACATTTGCTCCCAGCCGAGTGCCCCAACATTTGTTGCATCTTTCGGTAAGCGAATTCGGACATCATGAAGATTTCGTTCTCGAAGATACCCATTGACATGATCGCTTCCCTTCGAGCGTCCTCCTCCAACGGCTCGAACTTGCACACAATCGACGTCTCCTTATTGACCCTGGTCTTGCCCTCCTTCTGCGTGTATTTCACGGTCACCCTGTACATGTCGCTGGCATAATTGTCACCTTTGCTGGTCGCCGGTTTCGCGGATATATTCGTTACATTGATGCTGGTGTCGTACTCGTTGTACTGGAGGACCCTTTGCACGAATTCGTTATTTAACCATTCCAATTTATCCACCATTTTTTTCCCTGCGAGAGATTACTTGTACACAAAAGAAAGAATAAT]
consensusID : consensus_6#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 275 fasta sequence
[AGCTAACTCTTCAAAGCTTAGGCAAATTTCACGCGGCGTCGGTCGCACTGTGCGAGAAGGTAATTTCTTCTTCTTCGTTATACAATTATTTCCACGCGTAATCTTGGTTTTTTTTTTTCTTTTTCTTTTTCTTTTGTAGGAACCCAAATTAAAGACTGTATATCAGAAAGGGATACTGTACGAAGGAATGCCGACCGAATTCAAATTCTTCTTCATCTCCGCAATTAAAGCTCTTGGAGACGATTTGGCAAATTGGCCGCAAGACGTGAAAAGGT]
[+] EMBL BI510591 [AGCTAACTCTTCAAAGCTTAGGCAAATTTCACGCGGCGTCGGTCGCACTGTGCGAGAAGGTAATTTCTTCTTCTTCGTTATACAATTATTTCCACGCGTAATCTTGGTTTTTTTTTTTCTTTTTCTTTTTCTTTTGTAGGAACCCAAATTAAAGACTGTATATCAGAAAGGGATACTGTACGAAGGAATGCCGACCGAATTCAAATTCTTCTTCATCTCCGCAATTAAAGCTCTTGGAGACGATTTGGCAAATTGGCCGCAAGACGTGAAAAGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6#1 TAATCAAAGAATCGGGAGGAAGGAAGACGAAGATAATACCTGCGTGTGTTCGTGTATTTG 60
consensus_6#4 ------------------------------------------------------------
consensus_6#0 ------------------------------------------------------------
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 TGCGTCTGTGTGAGTGTGTGTGTCTAGAGCGAGGGAGAGAAAAAAGAGAGAGAGAGAGGT 120
consensus_6#4 ------------------------------------------------------------
consensus_6#0 ------------------------------------------------------------
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 AGAAACCGATCGAGAGGAAATGAAGGAAAGGGAAAGGGAAGGAAAAAGGGAAAAAAATGG 180
consensus_6#4 ------------------------------------------------------------
consensus_6#0 ------------------------------------------------------------
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 TGGATAAATTGGAATGGTTAAATAACGAATTCGTGCAAAGGGTCCTCCAGTACAATGAGT 240
consensus_6#4 ------------------------------------------------------------
consensus_6#0 ------------------------------------------------------------
consensus_6#2 -------------------------------------------------------TGTGT 5
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ACGACACCAGCATCAATGTAACGAATATATCCGCGAAACCGGCGACCAGCAAAGGTGACA 300
consensus_6#4 ------------------------------------------------------------
consensus_6#0 --CGTTCGTCCGTTTTTATTCGTTATTCTTTTTTATTTTTTTTTTTTTTCTTTTTCTTTT 58
consensus_6#2 TTCGTTCGTCCGTTTTTATTCGTTATTCTTTTTT-----------TTTTCTTTTTCTTTT 54
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ATTATGCCAGCGACATGTACAGGGTGACCGTGAAATACACGCAGAAGGAGGGCAAGACCA 360
consensus_6#4 ------------------------------------------------------------
consensus_6#0 TTCTTCCTCGTTTCTTTTCATACTTAACAATACAATACTTGCGGGAACAATTGTCAACGT 118
consensus_6#2 TTCTTCCTCGTTTCTTTTCATACTTAACAATACAATACTTGCGGGAACAATTGTCAACGT 114
consensus_6#3 ------------------------------------------------------------
consensus_6#1 GGGTCAATAAGGAGACGTCGATTGTGTGCAAGTTCGAGCCGTTGGAGGAGGACGCTCGAA 420
consensus_6#4 ------------------------------------------------------------
consensus_6#0 AGG---AAATAAATTTATTTCTTACGTTGAAAATTAGTATGTACAAGTAACAAGAAGATT 175
consensus_6#2 AGG---AAATAAATTTATTTCTTACGTTGAAAATTAGTATGTACAAGTAACAAGAAGATT 171
consensus_6#3 ------------------------CATTCTAAAGTAAAGTACATTTGCTCCCAGCCGAGT 36
consensus_6#1 GGGAAGCGATCATGTCAATGGGTATCTTCGAGAACGAAATCTTCATGATGTCGAATTCGC 480
consensus_6#4 ------------------------------------------------------------
consensus_6#0 GGTTATCAATCACATGGATCTTGAACGTTAATACCTTGTTAATTATAA--ATGGTTCTAT 233
consensus_6#2 GGTTATCAATCACATGGATCTTGAACGTTAATACCTTGTTAATTATAA--ATGGTTCTAT 229
consensus_6#3 GCCCCAACATTTGTTGCATCTTTCGGTAAGCGAATTCGGACATCATGA---AGATTTCGT 93
consensus_6#1 TACGAAAGATGCAACAAATGTTGGGCACTCGGCTGGGAGCAAATGTACTTTACT-TTAGA 539
consensus_6#4 ------------------------------------------------------------
consensus_6#0 AATATACAATG-ATATATATATATATATGTATATATAATTGTATATAATAATTTGCTAAA 292
consensus_6#2 AATATACAATGTATATATATATATATATGTATATATAATTGTATATAATAATTTGCTAAA 289
consensus_6#3 TCTCGAAGATACCCATTGACATGATCGCTTCCCTTCGAGCGTCCTCCTCCAAC-----GG 148
consensus_6#1 ATGGAACGGCCGGTTTGTTTGATATTGGAAGACCTTGCTCGTCTAGGATTTCGTATGGCC 599
consensus_6#4 ---------------AGCTAACTCTTCAAAGCTTAGGCAAATTTCACGCGGCGTCGGTCG 45
consensus_6#0 TTTGTACCATCGATTGGTGGACGTCTGGTAGGCGAAAAAGATATAAAAT---ATTCGTGG 349
consensus_6#2 TTTGTACCATCGATTGGTGGACGTCTGGTAGGCGAAAAAGATATAAAAT---ATTCGTGG 346
consensus_6#3 CTCGAACTTGCACACAATCGACGTCTCCTTATTGACCCTGGTCTTGCCC----TCCTTCT 204
* * * *
consensus_6#1 GATCGTTTCCGTGGTTTAGATTTCGATCATT----CCAAACTAACTCTTCAAAGCTTAGG 655
consensus_6#4 CACTGTGCGAGAAGGTAATTTCTTCTTCTTCG---TTATACAATTATTTCCACGCGTAAT 102
consensus_6#0 AATGACGCGTAGATATTAAATCTAAGACTTTTACTCTCTACACCGCCTACGAAACATAAT 409
consensus_6#2 AATGACGCGTAGATATTAAATCTAAGACTTTTACTCTCTACACCGCCTACGAAACATAAT 406
consensus_6#3 GCGTGTATTTCACGGTCACCCTGTACATGTCG--CTGGCATAATTGTCACCTTTGCTGGT 262
* * * * * *
consensus_6#1 CAAATTTCACGCGGCGTCGGTCGCACTGTGCGAGAAGGAACCCAAATTAAAGACTGTATA 715
consensus_6#4 CTTGGTTTTTTTTTTTCTTTTTCTTTTTCTTTTGTAGGAACCCAAATTAAAGACTGTATA 162
consensus_6#0 TGAACTTTG-GTCTCGTGAGTTTCTAGCTAAGTATATATATCGAAATTCGA----TTAAA 464
consensus_6#2 TGAACTTTG-GTCTCGTGAGTTTCTAGCTAAGTATATATATCGAAATTCGA----TTAAA 461
consensus_6#3 CGCCGGTTTCGCGGATATATTCGTTACATTGATGCTGGTGTCGTACTCG------TTGTA 316
* * * * * * *
consensus_6#1 TCAGAAAGGGATACTGTACGAAGGAATGCCGACCGAATTCAAATTCTTCTTCATCTCCGC 775
consensus_6#4 TCAGAAAGGGATACTGTACGAAGGAATGCCGACCGAATTCAAATTCTTCTTCATCTCCGC 222
consensus_6#0 TTATAA-GAAATAACCTATAACC--TCGTTAACGTAATT---ATTTTGCTTTAA-TTAGT 517
consensus_6#2 TTATAA-GAAATAACCTATAACC--TCGTTAACGTAATT---ATTTTTCTTTAA-TTAGT 514
consensus_6#3 CTGGAG-GACCCTTTGCACGAAT---TCGTTATTTAACC---ATTCCAATTTAT--CCAC 367
* * * * * ** *** ** *
consensus_6#1 AATTAAAGCTCTTGGAGACGATTTGGCAAATTGGCCGCAAGACGTGAAAAGGTATCAGGA 835
consensus_6#4 AATTAAAGCTCTTGGAGACGATTTGGCAAATTGGCCGCAAGACGTGAAAAGGT------- 275
consensus_6#0 CGTTTGATTAATCGGTAATTACGCTACGTATAATTCT---AATGTTAAATACATTCAAAA 574
consensus_6#2 CGTTTGATTAATCGGTAATTACGCTACGTATAATTCT---AATGTTAAATACATTCAAA- 570
consensus_6#3 CATTTTTTTCCCTGCGAGAGATT-----ACTTGTACACAAAAGAAAGAATAAT------- 415
** * * * * * **
consensus_6#1 TAAAGTTAAGAAATTCGCCGAAGTTGTTTACGACCGTGGTATAGCGGCATTGCAACGAAA 895
consensus_6#4 ------------------------------------------------------------
consensus_6#0 TTATTGAGCACGGTTGGTTGAATGAACCTCTCTCTTTCTCTCTCTTCATGTTTCATTTCT 634
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 CGACGACGAGTTCAACGTTATTAATCACGGTGATTCCTGGACGAACAATATGATGTATCG 955
consensus_6#4 ------------------------------------------------------------
consensus_6#0 TGTGCTCTCGTTCGATACGAAGATATAAAGGGTATAGCACGTAATTTCTAGAGTATCGTA 694
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ATACGACG---------------------------------------------------- 963
consensus_6#4 ------------------------------------------------------------
consensus_6#0 ACGATATGAAATACCGTGATAAATACGTGCAATTATCATGCAATTTAATTAACAAAGAGA 754
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ------------------------------------------------------------
consensus_6#4 ------------------------------------------------------------
consensus_6#0 AGAAGATAACGATAATCAACGAGTGTAGATTTAAAATGATGGATCGTGAAAAGTCTATCA 814
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ------------------------------------------------------------
consensus_6#4 ------------------------------------------------------------
consensus_6#0 ACGTATCTTATCGATTATTATCGTAGGTTACAATGGTTGGTATATCGTTTCGAGAGCGTA 874
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ------------------------------------------------------------
consensus_6#4 ------------------------------------------------------------
consensus_6#0 TAATATATCGTCTACGAGAAAGGATCATTGCACATGGCGCACGATTAATAATTATTTCCA 934
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ------------------------------------------------------------
consensus_6#4 ------------------------------------------------------------
consensus_6#0 ATCAGTTTGAAACAAGACGACACAGCTTGAATCCGTATTAATCAAACACGCCTGCTTCTT 994
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ------------------------------------------------------------
consensus_6#4 ------------------------------------------------------------
consensus_6#0 CGAATTTCGCTAATCTCTCGGCCATCACCTTCCGATACATGGGATTCTTGGTCCCGGGAT 1054
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ------------------------------------------------------------
consensus_6#4 ------------------------------------------------------------
consensus_6#0 AATCGAACGTGTCTCTCTTCTTGATCAGCTCGTCGATACTCACCACCTGGGATTTATCCA 1114
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ------------------------------------------------------------
consensus_6#4 ------------------------------------------------------------
consensus_6#0 TCAGGGTGAATGGCAATACGGTAGCCGCGGCTACCATCCCCCACGCTATCCTTTCTCTCA 1174
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ------------------------------------------------------------
consensus_6#4 ------------------------------------------------------------
consensus_6#0 TGTATCTTTTTATATCTTTTACCGTGGGTGGCGCCGTTTTGCAACCTAGCCTCTTCATCG 1234
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ------------------------------------------------------------
consensus_6#4 ------------------------------------------------------------
consensus_6#0 TGCTGGTCAACGTATTTACGTATTCCTCGATCAGATTCTCGGTGTTCACTTCGTTTTGGA 1294
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ------------------------------------------------------------
consensus_6#4 ------------------------------------------------------------
consensus_6#0 CGGTCGCGTTTAAAAAGTAGAGCAGGTCGATCGCCGGTGAAGTGTAGATCGACATTTGGT 1354
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 ------------------------------------------------------------
consensus_6#4 ------------------------------------------------------------
consensus_6#0 AATCCACGAACACGTGTTGGACAGGCTTTGAATTCTCGTCGTATCGATACATCATATTGT 1414
consensus_6#2 ------------------------------------------------------------
consensus_6#3 ------------------------------------------------------------
consensus_6#1 -----------------------------------------
consensus_6#4 -----------------------------------------
consensus_6#0 TCGTCCAGGAATCACCGTGATTAATAACGTTGAACTCGTCG 1455
consensus_6#2 -----------------------------------------
consensus_6#3 -----------------------------------------
|
|||||||
| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |