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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_654#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence
[CCTGTGAGCGCGAGAATAATAGTCCAACCTCAGAAGCCTAGGCTTGTATCGAGGATAGGAGGGATCGATATCGATTTCCTGGGAGCTAATCCATTCCAAGGTGGAGTACGTTTTCCCAACTTCCCAGCCCCACCCACTCGACGACCTGTGCAAAGTCCTCCGCCCTGCGTCTGGGCTGTTATCCAATGTTGTCCATCGAATCAACGTCTGGTCACATGTTTCGAGTCGTTGGGCTGTCCAGGTGTCAATTGGGATTCTAATCCTTGCAGAGATAGCGTCTCTCAAGCAGCTAGGGCACAGGTGGAGAAATTCTACAGGGAAACCGAGGACGAGGAGGAACGTTATTGAAAGGGGAACCGAGAAATATGTAGATTGGTAGATTCCATTTTTTTAGTATATTTTGATGAGTGGGGTCGAAAAATTCAATGATCAGAATTAAAGAATTTTTTTTCGATTAAACTATTAATTATTTGGAATGATATCGACAAATGGAATTTTCATAATTTTAAGTAACCATTAATTTTATCATTTTGATAAAAAAAAAATCGTTATAGGAATAATAAAATGGAAACGTAAATTTTCAATCAAATTTTTATT]
[+] EMBL BI509685 [CCTGTGAGCGCGAGAATAATAGTCCAACCTCAGAAGCCTAGGCTTGTATCGAGGATAGGAGGGATCGATATCGATTTCCTGGGAGCTAATCCATTCCAAGGTGGAGTACGTTTTCCCAACTTCCCAGCCCCACCCACTCGACGACCTGTGCAAAGTCCTCCGCCCTGCGTCTGGGCTGTTATCCAATGTTGTCCATCGAATCAACGTCTGGTCACATGTTTCGAGTCGTTGGGCTGTCCAGGTGTCAATTGGGATTCTAATCCTTGCAGAGATAGCGTCTCTCAAGCAGCTAGGGCACAGGTGGAGAAATTCTACAGGGAAACCGAGGACGAGGAGGAACGTTATTGAAAGGGGAACCGAGAAATATGTAGATTGGTAGATTCCATTTTTTTAGTATATTTTGATGAGTGGGGTCGAAAAATTCAATGATCAGAATTAAAGAATTTTTTTTCGATTAAACTATTAATTATTTGGAATGATATCGACAAATGGAATTTTCATAATTTTAAGTAACCATTAATTTTATCATTTTGATAAAAAAAAAATCGTTATAGGAATAATAAAATGGAAACGTAAATTTTCAATCAAATTTTTATT]
consensusID : consensus_654#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 593 fasta sequence
[GAGACGACAGGAAGAGGCGAGGTTGAACGCGTTGCCTGTGAGCGCGAGAATAATAGTCCAACCTCAGAAGCCTAGGCTTGTATCGAGGATAGGAGGGATCGATATCGATTTCCTGGGAGCTAATCCATTCCAAGGTGGAGTACGTTTCCCCAACTTCCCAGCCCCACCCACTCGACGACCTGTGCAAAGTCCTCCGCCCTGCGTCTGGGCTGTTATCCAATGTTGTCCATCGAATCAACGTCTGGTCACATGTTTCGAGTCGTTGGGCTGTCCAGGTGTCAATTGGGATTCTAATCCTTGCAGAGATAGCGTCTCTCAAGCAGCTAGGGCACAGGTGGAGAAATTCTACAGGGAAACCGAGGACGAGGAGGAACGTTATTGAAAGGGGAACCGAGAAATATGTAGATTGGTAGATTCCATTTTTTTAGTATATTTTGATGAGTGGGGTCGAAAAATTCAACGATCAGAATTAAAGAATTTTTTTTCGATTAATTTGGAACGATATATCAACAAATGGAATTTTCAAAATTTTAAGTAACCGTCAATTTTATCATTTTGATAAAAAAAAAATCGTTATAGGAATAATAAAATGG]
[+] EMBL BI515006 [GAGACGACAGGAAGAGGCGAGGTTGAACGCGTTGCCTGTGAGCGCGAGAATAATAGTCCAACCTCAGAAGCCTAGGCTTGTATCGAGGATAGGAGGGATCGATATCGATTTCCTGGGAGCTAATCCATTCCAAGGTGGAGTACGTTTCCCCAACTTCCCAGCCCCACCCACTCGACGACCTGTGCAAAGTCCTCCGCCCTGCGTCTGGGCTGTTATCCAATGTTGTCCATCGAATCAACGTCTGGTCACATGTTTCGAGTCGTTGGGCTGTCCAGGTGTCAATTGGGATTCTAATCCTTGCAGAGATAGCGTCTCTCAAGCAGCTAGGGCACAGGTGGAGAAATTCTACAGGGAAACCGAGGACGAGGAGGAACGTTATTGAAAGGGGAACCGAGAAATATGTAGATTGGTAGATTCCATTTTTTTAGTATATTTTGATGAGTGGGGTCGAAAAATTCAACGATCAGAATTAAAGAATTTTTTTTCGATTAATTTGGAACGATATATCAACAAATGG ]
[+] EMBL BI512550 [ AGGAGGGATCGATATCGATTTCCTGGGAGCTAATCCATTCCAAGGTGGAGTACGTTTCCCCAACTTCCCAGCCCCACCCACTCGACGACCTGTGCAAAGTCCTCCGCCCTGCGTCTGGGCTGTTATCCAATGTTGTCCATCGAATCAACGTCTGGTCACATGTTTCGAGTCGTTGGGCTGTCCAGGTGTCAATTGGGATTCTAATCCTTGCAGAGATAGCGTCTCTCAAGCAGCTAGGGCACAGGTGGAGAAATTCTACAGGGAAACCGAGGACGAGGAGGAACGTTATTGAAAGGGGAACCGAGAAATATGTAGATTGGTAGATTCCATTTTTTTAGTATATTTTGATGAGTGGGGTCGAAAAATTCAACGATCAGAATTAAAGAATTTTTTTTCGATTAATTTGGAACGATATATCAACAAATGGAATTTTCAAAATTTTAAGTAACCGTCAATTTTATCATTTTGATAAAAAAAAAATCGTTATAGGAATAATAAAATGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_654#0 ----------------------------------CCTGTGAGCGCGAGAATAATAGTCCA 26
consensus_654#1 GAGACGACAGGAAGAGGCGAGGTTGAACGCGTTGCCTGTGAGCGCGAGAATAATAGTCCA 60
**************************
consensus_654#0 ACCTCAGAAGCCTAGGCTTGTATCGAGGATAGGAGGGATCGATATCGATTTCCTGGGAGC 86
consensus_654#1 ACCTCAGAAGCCTAGGCTTGTATCGAGGATAGGAGGGATCGATATCGATTTCCTGGGAGC 120
************************************************************
consensus_654#0 TAATCCATTCCAAGGTGGAGTACGTTTTCCCAACTTCCCAGCCCCACCCACTCGACGACC 146
consensus_654#1 TAATCCATTCCAAGGTGGAGTACGTTTCCCCAACTTCCCAGCCCCACCCACTCGACGACC 180
*************************** ********************************
consensus_654#0 TGTGCAAAGTCCTCCGCCCTGCGTCTGGGCTGTTATCCAATGTTGTCCATCGAATCAACG 206
consensus_654#1 TGTGCAAAGTCCTCCGCCCTGCGTCTGGGCTGTTATCCAATGTTGTCCATCGAATCAACG 240
************************************************************
consensus_654#0 TCTGGTCACATGTTTCGAGTCGTTGGGCTGTCCAGGTGTCAATTGGGATTCTAATCCTTG 266
consensus_654#1 TCTGGTCACATGTTTCGAGTCGTTGGGCTGTCCAGGTGTCAATTGGGATTCTAATCCTTG 300
************************************************************
consensus_654#0 CAGAGATAGCGTCTCTCAAGCAGCTAGGGCACAGGTGGAGAAATTCTACAGGGAAACCGA 326
consensus_654#1 CAGAGATAGCGTCTCTCAAGCAGCTAGGGCACAGGTGGAGAAATTCTACAGGGAAACCGA 360
************************************************************
consensus_654#0 GGACGAGGAGGAACGTTATTGAAAGGGGAACCGAGAAATATGTAGATTGGTAGATTCCAT 386
consensus_654#1 GGACGAGGAGGAACGTTATTGAAAGGGGAACCGAGAAATATGTAGATTGGTAGATTCCAT 420
************************************************************
consensus_654#0 TTTTTTAGTATATTTTGATGAGTGGGGTCGAAAAATTCAATGATCAGAATTAAAGAATTT 446
consensus_654#1 TTTTTTAGTATATTTTGATGAGTGGGGTCGAAAAATTCAACGATCAGAATTAAAGAATTT 480
**************************************** *******************
consensus_654#0 TTTTTCGATTAAACTATTAATTATTTGGAATGATAT--CGACAAATGGAATTTTCATAAT 504
consensus_654#1 TTTTTCGATTAA-----------TTTGGAACGATATATCAACAAATGGAATTTTCAAAAT 529
************ ******* ***** * **************** ***
consensus_654#0 TTTAAGTAACCATTAATTTTATCATTTTGATAAAAAAAAAATCGTTATAGGAATAATAAA 564
consensus_654#1 TTTAAGTAACCGTCAATTTTATCATTTTGATAAAAAAAAAATCGTTATAGGAATAATAAA 589
*********** * **********************************************
consensus_654#0 ATGGAAACGTAAATTTTCAATCAAATTTTTATT 597
consensus_654#1 ATGG----------------------------- 593
****
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |