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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_797#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 740 fasta sequence
[GACGGTCGCGCGAACAAATGAACACCTCGGCACAGCGTTCGGGATATTCCAAAGATGTGAGGAATGATCACGTGGGTGATGGTCGGGCTGCTCCTGGCTGCGGAAACTTGCGGCAGAAACGTCCTCTCCGGAAACGGAAACGGAAAGGAGGAGTCGAAGCAGAAGGACGGGCTGAAGGGAATAACCGCGGAGGAGGAAGACATCTACCGTCTAACGTGCTACACTTGCGTCAACGTCAGCGATAACCAGATGTGCAACGAATGGGCGATAGACACACCGTGTCCGGCGGGCGGCCGGGACTTCTGCAGATCGCTGCACATTTTGGACAGCCGAGGGAATAGCGTGTTGGTGAGCAAGAGCTGTGTGAGCAGCGCGGAATGCGGCCCCGCCTCTGTCGGTTGCATCCCGGTGGACACGCAGCAGATTTGCATCAGTTGCTGCGACCTGAGCTACTGCAACATCGAGTCGCCGACCAACTCCACGAACGCCATTTTCTCGCGCAAACGGCGCGCCAAATCCAAGTCGAAACGCAAACGACCCGGTAGGAACGGGGTCGAGGGCGGCCGGTTCTACGGGGGTGGAGGCGCGCTCTGGCTCCTGGCCTCACTCTTCTATGCATATCATTGCTGAGGAAGCAGCAACGCGGATGAATTCTAGTTAGAAGACACGCGCACCAGGCAGCTCGGGTCAATCAATCCTTCTCCTACGAGTTTTGCGGGAATTACGTGAATTGAAATCTC]
[+] EMBL BI512193 [GACGGTCGCGCGAACAAATGAACACCTCGGCACAGCGTTCGGGATATTCCAAAGATGTGAGGAATGATCACGTGGGTGATGGTCGGGCTGCTCCTGGCTGCGGAAACTTGCGGCAGAAACGTCCTCTCCGGAAACGGAAACGGAAAGGAGGAGTCGAAGCAGAAGGACGGGCTGAAGGGAATAACCGCGGAGGAGGAAGACATCTACCGTCTAACGTGCTACACTTGCGTCAACGTCAGCGATAACCAGATGTGCAACGAATGGGCGATAGACACACCGTGTCCGGCGGGCGGCCGGGACTTCTGCAGATCGCTGCACATTTTGGACAGCCGAGGGAATAGCGTGTTGGTGAGCAAGAGCTGTGTGAGCAGCGCGGAATGCGGCCCCGCCTCT ]
[+] EMBL BI510821 [ TCAACGTCAGCGATAACCAGATGTGCAACGAATGGGCGATAGACACACCGTGTCCGGCGGGCGGCCGGGACTTCTGCAGATCGCTGCACATTTTGGACAGCCGAGGGAATAGCGTGTTGGTGAGCAAGAGCTGTGTGAGCAGCGCGGAATGCGGCCCCGCCTCTGTCGGTTGCATCCCGGTGGACACGCAGCAGATTTGCATCAGTTGCTGCGACCTGAGCTACTGCAACATCGAGTCGCCGACCAACTCCACGAACGCCATTTTCTCGCGCAAACGGCGCGCCAAATCCAAGTCGAAACGCAAACGACCCGGTAGGAACGGGGTCGAGGGCGGCCGGTTCTACGGGGGTGGAGGCGCGCTCTGGCTCCTGGCCTCACTCTTCTATGCATATCATTGCTGAGGAAGCAGCAACGCGGATGAATTCTAGTTAGAAGACACGCGCACCAGGCAGCTCGGGTCAATCAATCCTTCTCCTACGAGTTTTGCGGGAATTACGTGAATTGAAATCTC]
consensusID : consensus_797#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 591 fasta sequence
[TCCAAAGATGTGAGGAATGATCACGTGGGTGATGGTCGGGCTGCTCCTGGCTGCGGAAACTTGCGGCAGAAACGTCCTCTCCGGAAACGGAAACGGAAAGGAGGAGTCGAAGCAGAAGGACGGGCTGAAGGGAATAACCGCGGAGGAGGAAGACATCTACCGTGGGTATCGGTGTCGAAAAGCGACGTTGGCCAGAAAGGAAGGAGAGAGAGAGAGAGAGAGACGAGTGGAAGAAAAGTAGGGGAGAAAGGGCGGAGAGAGTACCGGGGGCAAACAGATCTATGATTTGCTCGGCTAACTCGAGCTTATCCAACCCTCTCGAATCCTGCAATCGAGCTCCGCTAATCCTCCTTCCTGCCTTTCTACCGCTTAACAGATCTCGCTGGCCACTTTACCTCCATCCACCTTCTACCAATTTCCCACAAATCATCCCCCTCCTCTCCCTCCCCTCCATCTCTCCACGTCCCTCGCTTGTAACGCATTGTTCTGAAATATCGCCAACCTTACCGCTTTCCTGCCAACCTTACTTAAACCAAACTCCATTCGCAGTTTCCGAACCGAGCGGCGGCAGTGGCGAGTTTACCCTGTTCG]
[+] EMBL BI505313 [TCCAAAGATGTGAGGAATGATCACGTGGGTGATGGTCGGGCTGCTCCTGGCTGCGGAAACTTGCGGCAGAAACGTCCTCTCCGGAAACGGAAACGGAAAGGAGGAGTCGAAGCAGAAGGACGGGCTGAAGGGAATAACCGCGGAGGAGGAAGACATCTACCGTGGGTATCGGTGTCGAAAAGCGACGTTGGCCAGAAAGGAAGGAGAGAGAGAGAGAGAGAGACGAGTGGAAGAAAAGTAGGGGAGAAAGGGCGGAGAGAGTACCGGGGGCAAACAGATCTATGATTTGCTCGGCTAACTCGAGCTTATCCAACCCTCTCGAATCCTGCAATCGAGCTCCGCTAATCCTCCTTCCTGCCTTTCTACCGCTTAACAGATCTCGCTGGCCACTTTACCTCCATCCACCTTCTACCAATTTCCCACAAATCATCCCCCTCCTCTCCCTCCCCTCCATCTCTCCACGTCCCTCGCTTGTAACGCATTGTTCTGAAATATCGCCAACCTTACCGCTTTCCTGCCAACCTTACTTAAACCAAACTCCATTCGCAGTTTCCGAACCGAGCGGCGGCAGTGGCGAGTTTACCCTGTTCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_797#0 GACGGTCGCGCGAACAAATGAACACCTCGGCACAGCGTTCGGGATATTCCAAAGATGTGA 60
consensus_797#1 -----------------------------------------------TCCAAAGATGTGA 13
*************
consensus_797#0 GGAATGATCACGTGGGTGATGGTCGGGCTGCTCCTGGCTGCGGAAACTTGCGGCAGAAAC 120
consensus_797#1 GGAATGATCACGTGGGTGATGGTCGGGCTGCTCCTGGCTGCGGAAACTTGCGGCAGAAAC 73
************************************************************
consensus_797#0 GTCCTCTCCGGAAACGGAAACGGAAAGGAGGAGTCGAAGCAGAAGGACGGGCTGAAGGGA 180
consensus_797#1 GTCCTCTCCGGAAACGGAAACGGAAAGGAGGAGTCGAAGCAGAAGGACGGGCTGAAGGGA 133
************************************************************
consensus_797#0 ATAACCGCGGAGGAGGAAGACATCTACCGTCTAACGTGCTACACTTGCGTCAACGTCAGC 240
consensus_797#1 ATAACCGCGGAGGAGGAAGACATCTACCGT-----GGGTATCGGTGTCG--AAAAGCGAC 186
****************************** * * * * ** ** * *
consensus_797#0 GATAACCAGATGTGCAACGAATGGGCGATAGACACACCGTGTCCGGCGGGCGGCCGGGAC 300
consensus_797#1 GTTGGCCAGAAAGG-AAGGAGAGAGAGAGAGAGAGAG-ACGAGTGGAAGAAAAGTAGGGG 244
* * ***** * ** ** * * ** *** * * * ** * **
consensus_797#0 TTCTGCAGATCGCTGCACATTTTGGACAGCCGAGGGAATAGCGTGTT-GGTGAGCAAGAG 359
consensus_797#1 AGAAAGGGCGGAGAGAGTACCGGGGGCAAACAGATCTATGATTTGCTCGGCTAACTCGAG 304
* * * ** ** * ** ** * ** * * ***
consensus_797#0 CTGTGTGAGCAGCGCGGAATGCGGC--CCCGCCTCTGTCGGTTGCATCCCGGTGGACACG 417
consensus_797#1 CTTATCCAACCCTCTCGAATCCTGCAATCGAGCTCCGCTAAT--CCTCCTTCCTGCCTTT 362
** * * **** * ** * *** * * * *** * *
consensus_797#0 CAGCAGATTTGCATCAGTTGCTGCGACCTGAGCTACTGCAACATCGAGTCGCCGACCAAC 477
consensus_797#1 CTACCGCTT---AACAGATCTCGCTGGCCACTTTACCTC--CATCCA-CCTTCTACCAAT 416
* * * ** * *** * ** * *** * **** * * * *****
consensus_797#0 TCCACGAACGCCATTTTCTCGCGCAAACGGCGCGCCAAATCCAAGTCGAAACGCAAACGA 537
consensus_797#1 TTCCCACAAATCATCCCCCTCCTC------TCCCTCCCCTCCATCTCTCCACGTCCCTCG 470
* * * * *** * * * * * **** ** ***
consensus_797#0 CCCGGTAGGAACGGGGTCGAGG-GCGGCCGGTTCTACGGGGGTGGAGGCGCGCTCTGGCT 596
consensus_797#1 CTTGTAACGCATTGTTCTGAAATATCGCCAACCTTACCGCTTTCCTGCCAACCTT----A 526
* * * * * * ** *** *** * * * * **
consensus_797#0 CCTGGCCTCACTCTTCTATGCATATCATTGCTGAGGAAGCAGCAACG-CGGATGAATTCT 655
consensus_797#1 CTTAAACCAAACTCCATTCGCAGTTTCCGAACCGAGCGGCGGCAGTGGCGAGTTTACCCT 586
* * * * * *** * * ** *** * ** * * **
consensus_797#0 AGTTAGAAGACACGCGCACCAGGCAGCTCGGGTCAATCAATCCTTCTCCTACGAGTTTTG 715
consensus_797#1 GTTCG------------------------------------------------------- 591
*
consensus_797#0 CGGGAATTACGTGAATTGAAATCTC 740
consensus_797#1 -------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |