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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_80#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1276 fasta sequence
[AATATATGATTTTTGGGAAATATCTTTTTTTAAGTTTTGCAGCTAACATTATAATACATTATATAAACTAAATAATGAAATTTTCACTGAATCAACGAAAAAAATTAAAAATAAAAAACATATTAACATTACATACTAAGATAGCCATGAGCTTGATTTCGACGACGACCAATCAAGTACGCGATCAATACTATAATCACTAATCCTGCCAATGCACAGCCTACTGCTATTGGTACGACGTCTGGTGTATCAAAAGCGCAATCTTTGGCTAAACCAAACATAGTAGAATTATCAACTTTGAATGCTTGAAATTGGAGTCCTGATACAATTAAATAACCAGATGTCTCATTACTATTATTCTGTTTTAAGTTGAGTGTTTGTTGTTTTAAACATCTATAAGAATTAGATAATCTAACTTCAAAATCAGGTGTTTCATGTACTAAAGATACTGATCCATTCAGTTTTAAATTTGAAGGAAAATCTGATGCTGGAAGAATGACTTCCAAATGGTGAAGAGAATAATCATTTTCAGTTGCATTTCTCATAAAATGCAATGTCATACTACCATTAGTTATATTTTTAGCAGACCATTCTAATGTCAAATTTTGTTCCAGTTTTCCACAATATCCACTTGCTTTTGTAGTAACATTATCTGTTGGTATATCGAATGTTATAAAAGATGTCTTATTATTAATGTTGACATAAGAGATATTAAACATTACAGACATCTGTATTACAATACAAATTTGATCTGTTCCATTAACAACTGTCCATTTACCAGTTGTGTAAGAAGACAAGGTAGAATTTATTGGAGCATGTATAACTATTGGATTAGTTATATCCGAAATTTTTTTAGATGTTTCATTTGTAGAAATTGAAATAGCTGTCATATCTAATGGCATGACAATAGAATGATTGGGAATAATTGTAGAAGTTTGAAGAGAATTTTTAATAACTTCTTGTTGCTTTATTTTATTCTCTGTGTTTGAAATAATTCCTAAATCTGTCATGGAAATATTCTTATTTGATAGAATATTTGCTTTTAAATATTCGGAATCATTTTGTAAAGATGTCCTGGGAGAAGTGAGAAGAGTATCATTCTTTTTAGATAAAACATTTTCCTGGTCTTCACCTAGAACGTGGACAGCAGTAAAGCAAAGAAGCAATAAAAACTTCGACATCATTAGAAGTTTTGAATTGCTAAAAATAAGTAAAATTCACTGAAAATTCAAACGTTTATAACTATTAAACAAATTGAACACTAATATAAGTGGAC]
[+] EMBL BI515384 [AATATATGATTTTTGGGAAATATCTTTTTTTAAGTTTTGCAGCTAACATTATAATACATTATATAAACTAAATAATGAAATTTTCACTGAATCAACGAAAAAAATTAAAAATAAAAAACATATTAACATTACATACTAAGATAGCCATGAGCTTGATTTCGACGACGACCAATCAAGTACGCGATCAATACTATAATCACTAATCCTGCCAATGCACAGCCTACTGCTATTGGTACGACGTCTGGTGTATCAAAAGCGCAATCTTTGGCTAAACCAAACATAGTAGAATTATCAACTTTGAATGCTTGAAATTGGAGTCCTGATACAATTAAATAACCAGATGTCTCATTACTATTATTCTGTTTTAAGTTGAGTGTTTGTTGTTTTAAACATCTATAAGAATTAGATAATCTAACTTCAAAATCAGGTGTTTCATGTACTAAAGATACTGATCCA ]
[+] EMBL BI515426 [AATATATGATTTTTGGGAAATATCTTTTTTTAAGTTTTGCAGCTAACATTATAATACATTATATAAACTAAATAATGAAATTTTCACTGAATCAACGAAAAAAATTAAAAATAAAAAACATATTAACATTACATACTAAGATAGCCATGAGCTTGATTTCGACGACGACCAATCAAGTACGCGATCAATACTATAATCACTAATCCTGCCAATGCACAGCCTACTGCTATTGGTACGACGTCTGGTGTATCAAAAGCGCAATCTTTGGCTAAACCAAACATAGTAGAATTATCAACTTTGAATGCTTGAAATTGGAGTCCTGATACAATTAAATAACCAGATGTCTCATTACTATTATTCTGTTTTAAGTTGAGTGTTTGTTGTTTTAAACATCTATAAGAATTAGATAATCTAACTTCAAAATCAGGTGTTTCATGTACTAAAGATACTGATCCAT ]
[-] EMBL BI515889 [ TTGATTTCGACGACGACCAATCAAGTACGCGATCAATACTATAATCACTAATCCTGCCAATGCACAGCCTACTGCTATTGGTACGACGTCTGGTGTATCAAAAGCGCAATCTTTGGCTAAACCAAACATAGTAGAATTATCAACTTTGAATGCTTGAAATTGGAGTCCTGATACAATTAAATAACCAGATGTCTCATTACTATTATTCTGTTTTAAGTTGAGTGTTTGTTGTTTTAAACATCTATAAGAATTAGATAATCTAACTTCAAAATCAGGTGTTTCATGTACTAAAGATACTGATCCATTCAGTTTTAAATTTGAAGGAAAATCTGATGCTGGAAGAATGACTTCCAAATGGTGAAGAGAATAATCATTTTCAGTTGCATTTCTCATAAAATGCAATGTCATACTACCATTAGTTATATTTTTAGCAGACCATTCTAATG ]
[-] EMBL BI516309 [ ACTAAAGATACTGATCCATTCAGTTTTAAATTTGAAGGAAAATCTGATGCTGGAAGAATGACTTCCAAATGGTGAAGAGAATAATCATTTTCAGTTGCATTTCTCATAAAATGCAATGTCATACTACCATTAGTTATATTTTTAGCAGACCATTCTAATGTCAAATTTTGTTCCAGTTTTCCACAATATCCACTTGCTTTTGTAGTAACATTATCTGTTGGTATATCGAATGTTATAAAAGATGTCTTATTATTAATGTTGACATAAGAGATATTAAACATTACAGACATCTGTATTACAATACAAATTTGATCTGTTCCATTAACAACTGTCCATTTACCAGTTGTGTAAGAAGACAAGGTAGAATTTATTGGAGCATGTATAACTATTGGATTAGTTATATCCGAAATTTTTTTAGATGTTTCATTTGTAGAAATTGAAATAGCTGTCATATCTAATGGCATGACAATAGAATGATTGGGAATAATTGTAGAAGTTTGAAGAGAATTTTTAATAACTTCTTGTTGCTTTATTTTATTCTCTGTGTTTGAAA ]
[-] EMBL BI511187 [ ATTACAATACAAATTTGATCTGTTCCATTAACAACTGTCCATTTACCAGTTGTGTAAGAAGACAAGGTAGAATTTATTGGAGCATGTATAACTATTGGATTAGTTATATCCGAAATTTTTTTAGATGTTTCATTTGTAGAAATTGAAATAGCTGTCATATCTAATGGCATGACAATAGAATGATTGGGAATAATTGTAGAAGTTTGAAGAGAATTTTTAATAACTTCTTGTTGCTTTATTTTATTCTCTGTGTTTGAAATAATTCCTAAATCTGTCATGGAAATATTCTTATTTGATAGAATATTTGCTTTTAAATATTCGGAATCATTTTGTAAAGATGTCCTGGGAGAAGTGAGAAGAGTATCATTCTTTTTAGATAAAACATTTTCCTGGTCTTCACCTAGAACGTGGACAGCAGTAAAGCAAAGAA ]
[-] EMBL BI511981 [ ACAATACAAATTTGATCTGTTCCATTAACAACTGTCCATTTACCAGTTGTGTAAGAAGACAAGGTAGAATTTATTGGAGCATGTATAACTATTGGATTAGTTATATCCGAAATTTTTTTAGATGTTTCATTTGTAGAAATTGAAATAGCTGTCATATCTAATGGCATGACAATAGAATGATTGGGAATAATTGTAGAAGTTTGAAGAGAATTTTTAATAACTTCTTGTTGCTTTATTTTATTCTCTGTGTTTGAAATAATTCCTAAATCTGTCATGGAAATATTCTTATTTGATAGAATATTTGCTTTTAAATATTCGGAATCATTTTGTAAAGATGTCCTGGGAGAAGTGAGAAGAGTATCATTCTTTTTAGATAAAACATTTTCCTGGTCTTCACCTAGAACGTGGACAGCAGTAAAGCAAAGAAGCAATAAAAACTTCGACATCATTAGAAGTTTTGAATTGCTAAAAATAAGTAAAATTCACTGAAAATTCAAACGTTTATAACTATTAAACAAATT ]
[-] EMBL BI514426 [ TGTTCCATTAACAACTGTCCATTTACCAGTTGTGTAAGAAGNNAAGGTAGAATTTATTGGAGCATGTATAACTATTGGATTAGTTATATCCGAAATTTTTTTAGATGTTTCATTCGTAGAAATTGAAATAGCTGTCATATCTAATGGCATGACAATAGAATGATTGGGAATAATTGTAGAAGTTTGAAGAGAATTTTTAATAACTTCTTGTTGCTTTATTTTATTCTCTNTGTTTGAAATAATTCCTAAATCTGTCATGGAAATATTCTTATTTGATAGAATATTTGCTTTTAAATATTCGGAATCATTTTGTAAAGATGTCCTGGGAGAAGTGAGAAGAGTATCATTCTTTTTAGATAAAACATTTTCCTGGTCTTCACCTAGAACGTGGACAGCAGTAAAGCAAAGAAGCAATAAAAACTTCGACATCATTAGAAGTTTTGAATTGCTAAAAATAAGTAAAATTCACTGAAAATTCAAACGTTTATAACTATTAAACAAATTGAACACTAATATAAGTGGAC]
consensusID : consensus_80#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 619 fasta sequence
[GACGACGACCAATCAAGTACGCGATCAATACTATAATCACTAATCCTGCCAATGCACAGCCTACTGCTATTGGTACGACGTCTGGTGTATCAAAAGCGCAATCTTTGGCTGTAAAATAATAATAAATAATTATTATTAATAAATATTATTGATTTAATTAAATTTTTATATTTTTATTACCTATAAATTACCTATAAATTAAAAATTAGATAAAATTTAAAATTAATGAGCTACAATACAATAGTAATATTATTTACTTTTTTATATGAATTAAAAAAGTATATTTAAATGTATAGTATACAAATATAAAAATTAATTTTTTAAATACATACAATTATATTGAATATTGAACTCATTACCTAAACCAAACATAGTAGAATTATCAACTTTGAATGCTTGAAATTGGAGTCCTGATACAATTAAATAACCAGATGTCTCATTACTATTATTCTGTTTTAAGTTGAGTGTTTGTTGTTTTAAACATCTATAAGAATTAGATAATCTAACTTCAAAATCAGGTGTTTCATGTACTAAAGATACTGATCCATTCAGTTTTAAATTTGAAGGAAAATCTGATGCTGGAAGAATGACTTCCAAATGGTGAAGAGAATAATCATTT]
[-] EMBL BI504871 [GACGACGACCAATCAAGTACGCGATCAATACTATAATCACTAATCCTGCCAATGCACAGCCTACTGCTATTGGTACGACGTCTGGTGTATCAAAAGCGCAATCTTTGGCTGTAAAATAATAATAAATAATTATTATTAATAAATATTATTGATTTAATTAAATTTTTATATTTTTATTACCTATAAATTACCTATAAATTAAAAATTAGATAAAATTTAAAATTAATGAGCTACAATACAATAGTAATATTATTTACTTTTTTATATGAATTAAAAAAGTATATTTAAATGTATAGTATACAAATATAAAAATTAATTTTTTAAATACATACAATTATATTGAATATTGAACTCATTACCTAAACCAAACATAGTAGAATTATCAACTTTGAATGCTTGAAATTGGAGTCCTGATACAATTAAATAACCAGATGTCTCATTACTATTATTCTGTTTTAAGTTGAGTGTTTGTTGTTTTAAACATCTATAAGAATTAGATAATCTAACTTCAAAATCAGGTGTTTCATGTACTAAAGATACTGATCCATTCAGTTTTAAATTTGAAGGAAAATCTGATGCTGGAAGAATGACTTCCAAATGGTGAAGAGAATAATCATTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_80#0 ------------------------------------------------------------
consensus_80#1 GACGACGACCAATCAAGTACGCGATCAATACTATAATCACTAATCCTGCCAATGCACAGC 60
consensus_80#0 ----------------AATATATGATTTTTGGGAAAT---ATCTTT---TTTTAAGTTTT 38
consensus_80#1 CTACTGCTATTGGTACGACGTCTGGTGTATCAAAAGCGCAATCTTTGGCTGTAAAATAAT 120
* * ** * * * ** ****** * * ** * *
consensus_80#0 G-----CAGCTAACATTATAATACATTATATA---AACTAAATAATGAAATTTTCACTGA 90
consensus_80#1 AATAAATAATTATTATTAATAAATATTATTGATTTAATTAAATTTTTATATTTTTATTAC 180
* ** **** * * ***** * ** ***** * * ***** * *
consensus_80#0 --ATCAACGAA--AAAAATTAAAAATAAAAAACATATTAACATTA-CATACTAAGATAGC 145
consensus_80#1 CTATAAATTACCTATAAATTAAAAATTAGATAAAATTTAAAATTAATGAGCTACAATA-C 239
** ** * * *********** * * * * **** **** *** *** *
consensus_80#0 CATGAGCTTGATTTCGACGACGACCAATCAAGTACGCGATCAATACTATAATCACTAATC 205
consensus_80#1 AATAGTAATATTATTTACTTTTTTATATGAATTAAAAAAGTA-TATTTAAATGTATAGTA 298
** * * * ** ** ** ** * * ** * *** ** *
consensus_80#0 CTGCCAATGCACAGCCTACTGCTATTGGTACGACGTCTGGTGTATCAAAAGCGCAATCTT 265
consensus_80#1 -TACAAATATAAAAATTAATTTTTTAAATACATACAATTATAT-TGAATATTGAACTCAT 356
* * *** * * ** * * * *** * * * * ** * * * ** *
consensus_80#0 TGGCTAAACCAAACATAGTAGAATTATCAACTTTGAATGCTTGAAATTGGAGTCCTGATA 325
consensus_80#1 TACCTAAACCAAACATAGTAGAATTATCAACTTTGAATGCTTGAAATTGGAGTCCTGATA 416
* *********************************************************
consensus_80#0 CAATTAAATAACCAGATGTCTCATTACTATTATTCTGTTTTAAGTTGAGTGTTTGTTGTT 385
consensus_80#1 CAATTAAATAACCAGATGTCTCATTACTATTATTCTGTTTTAAGTTGAGTGTTTGTTGTT 476
************************************************************
consensus_80#0 TTAAACATCTATAAGAATTAGATAATCTAACTTCAAAATCAGGTGTTTCATGTACTAAAG 445
consensus_80#1 TTAAACATCTATAAGAATTAGATAATCTAACTTCAAAATCAGGTGTTTCATGTACTAAAG 536
************************************************************
consensus_80#0 ATACTGATCCATTCAGTTTTAAATTTGAAGGAAAATCTGATGCTGGAAGAATGACTTCCA 505
consensus_80#1 ATACTGATCCATTCAGTTTTAAATTTGAAGGAAAATCTGATGCTGGAAGAATGACTTCCA 596
************************************************************
consensus_80#0 AATGGTGAAGAGAATAATCATTTTCAGTTGCATTTCTCATAAAATGCAATGTCATACTAC 565
consensus_80#1 AATGGTGAAGAGAATAATCATTT------------------------------------- 619
***********************
consensus_80#0 CATTAGTTATATTTTTAGCAGACCATTCTAATGTCAAATTTTGTTCCAGTTTTCCACAAT 625
consensus_80#1 ------------------------------------------------------------
consensus_80#0 ATCCACTTGCTTTTGTAGTAACATTATCTGTTGGTATATCGAATGTTATAAAAGATGTCT 685
consensus_80#1 ------------------------------------------------------------
consensus_80#0 TATTATTAATGTTGACATAAGAGATATTAAACATTACAGACATCTGTATTACAATACAAA 745
consensus_80#1 ------------------------------------------------------------
consensus_80#0 TTTGATCTGTTCCATTAACAACTGTCCATTTACCAGTTGTGTAAGAAGACAAGGTAGAAT 805
consensus_80#1 ------------------------------------------------------------
consensus_80#0 TTATTGGAGCATGTATAACTATTGGATTAGTTATATCCGAAATTTTTTTAGATGTTTCAT 865
consensus_80#1 ------------------------------------------------------------
consensus_80#0 TTGTAGAAATTGAAATAGCTGTCATATCTAATGGCATGACAATAGAATGATTGGGAATAA 925
consensus_80#1 ------------------------------------------------------------
consensus_80#0 TTGTAGAAGTTTGAAGAGAATTTTTAATAACTTCTTGTTGCTTTATTTTATTCTCTGTGT 985
consensus_80#1 ------------------------------------------------------------
consensus_80#0 TTGAAATAATTCCTAAATCTGTCATGGAAATATTCTTATTTGATAGAATATTTGCTTTTA 1045
consensus_80#1 ------------------------------------------------------------
consensus_80#0 AATATTCGGAATCATTTTGTAAAGATGTCCTGGGAGAAGTGAGAAGAGTATCATTCTTTT 1105
consensus_80#1 ------------------------------------------------------------
consensus_80#0 TAGATAAAACATTTTCCTGGTCTTCACCTAGAACGTGGACAGCAGTAAAGCAAAGAAGCA 1165
consensus_80#1 ------------------------------------------------------------
consensus_80#0 ATAAAAACTTCGACATCATTAGAAGTTTTGAATTGCTAAAAATAAGTAAAATTCACTGAA 1225
consensus_80#1 ------------------------------------------------------------
consensus_80#0 AATTCAAACGTTTATAACTATTAAACAAATTGAACACTAATATAAGTGGAC 1276
consensus_80#1 ---------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |