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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_802#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 725 fasta sequence
[TTTAAATGTATATTAGAAGGTAATTCAACCAACTCCAGAACTTTCTCCATGCACAAGCGAAGCAGGTCTTTATGCAAAAAACGTGATGATCACAGGGATTAACGGTAAAAGAGCACCATTGGCTTCTATGGGCAGTGTTGATCCTCCAGAAGCAGATTCGAGGTCTCTTGGTTCCGACTCGGTCTTCCTAAGAAACGATGAACAAGAAGAGTGTCTCGACACAGAGGATGAAGTGTCTGGATTTTCGACCGATTCTGAAACAGCCGGGCCAAGTTGTCGACGGTTTCTTCGAGTACCCTCGAAAAAGAAGAAAACAATTGAAAAATGGGATGGTTGTGCTGGATGTGTTCCTAGACGGCGATCTGGAGGCAAACTTTGTCAAGCTTGTCATAGTATTAGTGCAGCTGTTGAAACCTCTAGGTCTCAGACAGTTTCTACGAGCACCAGCAGTCAGACTAGTCTCGGTTCTCCTCCGTGTTCACCAACTATCGAACTCAGACATAGACCACCACCGACACCATTGCCATCAAGTCCACCTATTTGGTCTCAAGAAACGCTCTTTTAATTCTCTAAAAACTTGCCGTTTTCATAAATGATTAGTAACCGCACAAATATATTCCTTTCATAAGAAAAACGAACAAAGAAAATGAAGAACAACTGTAAAAAATAATTGATAAAATAATTTTGACTATATTAAATGAAATTACAAAAACAAAAAATACAAA]
[+] EMBL BI516427 [TTTAAATGTATATTAGAAGGTAATTCAACCAACTCCAGAACTTTCTCCATGCACAAGCGAAGCAGGTCTTTATGCAAAAAACGTGATGATCACAGGGATTAACGGTAAAAGAGCACCATTGGCTTCTATGGGCAGTGTTGATCCTCCAGAAGCAGATTCGAGGTCTCTTGGTTCCGACTCGGTCTTCCTAAGAAACGATGAACAAGAAGAGTGTCTCGACACAGAGGATGAAGTGTCTGGATTTTCGACCGATTCTGAAACAGCCGGGCCAAGTTGTCGACGGTTTCTTCGAGTACCCTCGAAAAAGAAGAAAACAATTGAAAAATGGGATGGTTGTGCTGGATGTGTTCCTAGACGGCGATCTGGAGGCAAACTTTGTCAAGCTTGTCATAGTATTAGTG ]
[+] EMBL BI516070 [ TTTTCGACCGATTCTGAAACAGCCGGGCCAAGTTGTCGACGGTTTCTTCGAGTACCCTCGAAAAAGAAGAAAACAATTGAAAAATGGGATGGTTGTGCTGGATGTGTTCCTAGACGGCGATCTGGAGGCAAACTTTGTCAAGCTTGTCATAGTATTAGTGCAGCTGTTGAAACCTCTAGGTCTCAGACAGTTTCTACGAGCACCAGCAGTCAGACTAGTCTCGGTTCTCCTCCGTGTTCACCAACTATCGAACTCAGACATAGACCACCACCGACACCATTGCCATCAAGTCCACCTATTTGGTCTCAAGAAACGCTCTTTTAATTCTCTAAAAACTTGCCGTTTTCATAAATGATTAGTAACCGCACAAATATATTCCTTTCATAAGAAAAACGAACAAAGAAAATGAAGAACAACTGTAAAAAATAATTGATAAAATAATTTTGACTATATTAAATGAAATTACAAAAACAAAAAATACAAA]
consensusID : consensus_802#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 531 fasta sequence
[CAGTACCATGTTTGCCGCTTCATTCTACGTTTTCAACTAAATACACTATCCATGATGAACTCTGGGATCTTTATTATCCCATTGATATTCAAGTAATTCAACCAACTCCAGAACTTTCTCCATGCACAAGCGAAGCAGGTCTTTATGCAAAAAACGTGATGATCACAGGGATTAACGGTAAAAGAGCACCATTGGCTTCTATGGGCAGTGTTGATCCTCCAGAAGCAGATTCGAGGTTATCGATATATTTATATAGAATACATATTATATTTATATAGAATACATAATTTTGAATAAAATTTTAAAAGATCTGGTTGGTCGATAATTTTGGAAAAATAGTAGAGAAGAAAAGATTCAAATATAAAATTTTCGATTTAACTAATTATTATTTTCCAAGATATTAATAAAATTCATATATTATTATCTATCTAGATATTATTAATATAAATTAATCTTTGCTATAAAAATAACGTCATCGATTGTCGAATAACCATTGATATTATTATATGTTAAAAAGTATCCTAAAAATAT]
[+] EMBL BI513308 [CAGTACCATGTTTGCCGCTTCATTCTACGTTTTCAACTAAATACACTATCCATGATGAACTCTGGGATCTTTATTATCCCATTGATATTCAAGTAATTCAACCAACTCCAGAACTTTCTCCATGCACAAGCGAAGCAGGTCTTTATGCAAAAAACGTGATGATCACAGGGATTAACGGTAAAAGAGCACCATTGGCTTCTATGGGCAGTGTTGATCCTCCAGAAGCAGATTCGAGGTTATCGATATATTTATATAGAATACATATTATATTTATATAGAATACATAATTTTGAATAAAATTTTAAAAGATCTGGTTGGTCGATAATTTTGGAAAAATAGTAGAGAAGAAAAGATTCAAATATAAAATTTTCGATTTAACTAATTATTATTTTCCAAGATATTAATAAAATTCATATATTATTATCTATCTAGATATTATTAATATAAATTAATCTTTGCTATAAAAATAACGTCATCGATTGTCGAATAACCATTGATATTATTATATGTTAAAAAGTATCCTAAAAATAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_802#0 ------------------------------------------------------------
consensus_802#1 CAGTACCATGTTTGCCGCTTCATTCTACGTTTTCAACTAAATACACTATCCATGATGAAC 60
consensus_802#0 ---------------TTTAAATGTATATTAGAAGGTAATTCAACCAACTCCAGAACTTTC 45
consensus_802#1 TCTGGGATCTTTATTATCCCATTGATATT--CAAGTAATTCAACCAACTCCAGAACTTTC 118
* ** ***** * **************************
consensus_802#0 TCCATGCACAAGCGAAGCAGGTCTTTATGCAAAAAACGTGATGATCACAGGGATTAACGG 105
consensus_802#1 TCCATGCACAAGCGAAGCAGGTCTTTATGCAAAAAACGTGATGATCACAGGGATTAACGG 178
************************************************************
consensus_802#0 TAAAAGAGCACCATTGGCTTCTATGGGCAGTGTTGATCCTCCAGAAGCAGATTCGAGGTC 165
consensus_802#1 TAAAAGAGCACCATTGGCTTCTATGGGCAGTGTTGATCCTCCAGAAGCAGATTCGAGGT- 237
***********************************************************
consensus_802#0 TCTTGGTTCCGACTCGGTCTTCCTAAGAAACGATGAACAAGAAGAGTGTCTCGACACAGA 225
consensus_802#1 ------TATCGATATA-TTTATATAGAATAC-----------ATATTATATTTATATAGA 279
* *** * * ** * ** * * * * * * * ***
consensus_802#0 GGATGAAGTGTCTGGATTTTCGACCGATTCTGAAACAGCCGGGCCAAGTTGTCGACGGTT 285
consensus_802#1 ATACATA--------ATTTTGAATAAAATTTTAAAAGATCTGGTTG----GTCGATAATT 327
* * ***** * * * * *** * ** ***** **
consensus_802#0 TCTTCGAGTACCCTCGAAAAAGAAGAAAACAATTGAAAAATGGGATGGTTG--TGCTGGA 343
consensus_802#1 T-TGGAAAAATAGTAGAGAAGAAAAGATTCAAATATAAAATTTTCGATTTAACTAATTAT 386
* * * * * ** ** ** * *** * ***** ** * *
consensus_802#0 TGTGTTCCTAGACGGCGATCTGGAGGCAAACTTTGTCAAGCTTGTCATAGTATTAGTGCA 403
consensus_802#1 TATTTTCCAAGATATTAATA-AAATTCATATATTATTA--TCTATCTAGATATTATTAAT 443
* * **** *** ** * ** * ** * * * ** ***** *
consensus_802#0 GCTGTTGAAACCTCTAGGTCTCAGACAGTTTCTACGAGCACCAGCAGTCAGACTAGTCTC 463
consensus_802#1 ATAAATTAA---TCTTTGCTATAAAAA-----TAACGTCATCGATTGTCGAATAACCATT 495
* ** *** * * * * ** ** * *** * * *
consensus_802#0 GGTTCTCCTCCGTGTTCACCAACTATCGAACTCAGACATAGACCACCACCGACACCATTG 523
consensus_802#1 GATATTATTATATGTTAAAAAGTATCCTAA---AAATAT--------------------- 531
* * * * **** * * * ** * * **
consensus_802#0 CCATCAAGTCCACCTATTTGGTCTCAAGAAACGCTCTTTTAATTCTCTAAAAACTTGCCG 583
consensus_802#1 ------------------------------------------------------------
consensus_802#0 TTTTCATAAATGATTAGTAACCGCACAAATATATTCCTTTCATAAGAAAAACGAACAAAG 643
consensus_802#1 ------------------------------------------------------------
consensus_802#0 AAAATGAAGAACAACTGTAAAAAATAATTGATAAAATAATTTTGACTATATTAAATGAAA 703
consensus_802#1 ------------------------------------------------------------
consensus_802#0 TTACAAAAACAAAAAATACAAA 725
consensus_802#1 ----------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |