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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_927#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 608 fasta sequence
[TATTATATATCGCGAGCTGCGAAGTGGTAATTTCCTTAGAGACGAACTCGAAACTGCGGCCCAACGACCCATAATATAATTATCGCTTTTAATCATCGTACCATCTGCCCCCATCGATTGGATTCCGCAATTGTCCGCGTACGTGGCATCGATCGTTTTTAACAAACGTTTCGCGAGTCGATGCACGTGCTTCCTCGCGCGAATGTAAGCGTGATCGCATCTGTGCCATCGTTAGTTAGAGACGCGTTTTCGTTCATGTTCGTCTATACATATATACATATATACATATATATATATATGTATATATATTNNGTGTATATATATATACACACGCGCAAACACAGACACACACACACCTGTACATTTGAGAGAAAGAGAGACTGGAATGGAGGAATGAATATGTGAATGTGTGTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGAGAATGCATTAGGGAGATACGCAAAATACACGCACACCTTATAGCCTTCGTTCTTCCGCACCGATTTGATTTCTTCTTGCGAATCCAATCGCACGTCTCCTTCTTCCCTGCGTATATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAAAAAAAAAAAC]
[+] EMBL BI510631 [TATTATATATCGCGAGCTGCGAAGTGGTAATTTCCTTAGAGACGAACTCGAAACTGCGGCCCAACGACCCATAATATAATTATCGCTTTTAATCATCGTACCATCTGCCCCCATCGATTGGATTCCGCAATTGTCCGCGTACGTGGCATCGATCGTTTTTAACAAACGTTTCGCGAGTCGATGCACGTGCTTCCTCGCGCGAATGTAAGCGTGATCGCATCTGTGCCATCGTTAGTTAGAGACGCGTTTTCGTTCATGTTCGTCTATACATATATACATATATAC ATATATATATGTATATATATTNNGTGTATATATATATACACACGCGCAAACACAGACACACACACACCTGTACATTTGAGAGAAAGAGAGACTGGAATGGAGGAATGAATATGTGAATGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAAAG ]
[+] EMBL BI515015 [ CTTAGAGACGAACTCGAAACTGCGGCCCAACGACCCATAATATAATTATCGCTTTTAATCATCGTACCATCTGCCCCCATCGATTGGATTCCGCAATTGTCCGCGTACGTGGCATCGATCGTTTTTAACAAACGTTTCGCGAGTCGATGCACGTGCTTCCTCGCGCGAATGTAAGCGTGATCGCATCTGTGCCATCGTTAGTTAGAGACGCGTTTTCGTTCATGTTCGTCTATACATATATACATATATACATATATATATATATATATATATATTGTGTGTATATATATATACACACGTGCAAACACAGACACACACACACCTGTACATTTGAGAGAAAGAGAGACTGGAATGGAGGAATGAATATGTGAATGTGTGTGCGAGAGAGAGAGAGAGAGAGAGAAAGAGGAGAGAATGCATTAGGGAGATACGCAAAATACACGCACACCTTATAGCCTTCGTTCTTCCGCACCGATTTGATTTCTTCTTGCGAATCCAATCGCACGTCTCCTTCTTCCCTGCGTATATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAAAAAAAAAAAC]
consensusID : consensus_927#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence
[CTCCTTCTTCCCTGCGTATATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAAAAAAAAAAACGTACGTATTTTCTATCCGTTTAATGGCGAAAGAAATTCATCCTTCTTTCGAGAAGAAATCCGAATTTAAAGTGTTCGTTCGATAGGATTTTGATTTTCCTTTTTTTCTCTCTCTTCTAAATTGCTCGAATGTGTAAAAGTGGATCGAACGATTATAGATAAGATCGGGTCGATCAGACGACGCAGGGATACGATACGTAGAAATCCACGAAACTCTAAAGGAGATCGCATTATATTATAACTAGGCATCTAAGGAAGCTACGTGTCTAAGTATGTATGTATCTGTAAGTTGTGNGTTAGCATGTCAAGCGTGGGATATAGTGATGTAATTGAACGAGAAAGAGAAAAGAGAAAAGGCGCTCCGAAAGGGTCGGCGTCTCGTA]
[+] EMBL BI513764 [CTCCTTCTTCCCTGCGTATATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAAAAAAAAAAACGTACGTATTTTCTATCCGTTTAATGGCGAAAGAAATTCATCCTTCTTTCGAGAAGAAATCCGAATTTAAAGTGTTCGTTCGATAGGATTTTGATTTTCCTTTTTTTCTCTCTCTTCTAAATTGCTCGAATGTGTAAAAGTGGATCGAACGATTATAGATAAGATCGGGTCGATCAGACGACGCAGGGATACGATACGTAGAAATCCACGAAACTCTAAAGGAGATCGCATTATATTATAACTAGGCATCTAAGGAAGCTACGTGTCTAAGTATGTATGTATCTGTAAGTTGTGNGTTAGCATGTCAAGCGTGGGATATAGTGATGTAATTGAACGAGAAAGAGAAAAGAGAAAAGGCGCTCCGAAAGGGTCGGCGTCTCGTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_927#0 --TATTATATATCGCGAGCTGCGAAGTGGTAATTTCCTTAGAGACGAACTCGAAACTGCG 58
consensus_927#1 CTCCTTCTTCCCTGCGTA-TATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAAAA 59
** * *** * *** * **** * * ** *** *
consensus_927#0 GCCCAACGACCCATAATATAATTATCGCTTTTAATCATCGTACCATCTGCCCCCATCGAT 118
consensus_927#1 AAAAAAACGTACGTATTTTCTATCCGTTTAATGGCGAAAGAAATTCATCCTTCTTTCGAG 119
** * ** * * * * * * * * * * * ****
consensus_927#0 TGGATTCCGCAATTGTCCGCGTACGTGGCATCGATCGTTTTTAACAAACGTTTCGCGAGT 178
consensus_927#1 AAGAAATCCGAATTTAAAGTGTTCGT----TCGATAGGATTTTGATTTTCCTTTTTTTCT 175
** * **** * ** *** ***** * *** ** *
consensus_927#0 CGATGCACGTGCTTCCTCGCGCGAATGTAAGCGTGATCGCATCTGTGCCATCGTTAGTTA 238
consensus_927#1 CTCTCTTCTAAATTGCTCGAATGTGTAAAAGTG-GATCGAACGATTATAG--ATAAGATC 232
* * * ** **** * * *** * ***** * * * ** *
consensus_927#0 GAGACGCGTTTTCGTTCATGTTCGTCTATACATATATACATATATACATATATATATATA 298
consensus_927#1 GGGTCGATCAGACGACGCAGGGATACGATACGTAGAAATCCACGAAACTCTAAAGGAGAT 292
* * ** ** * * **** ** * * * * * ** *
consensus_927#0 TGTATATATATTNNGTGTATATATATATACACACGCGCAAACACAGACACACACACACCT 358
consensus_927#1 CGCAT-TATATTATAACTAGGCATCTAAGGAAGC-TACGTGTCTAAGTATGTATGTATCT 350
* ** ****** ** ** ** * * * * * * * **
consensus_927#0 GTACATTTGAGAGAAAGAGAGACTGGAATGGAGGAATGAATATGTGAATGTGTGTGCGAG 418
consensus_927#1 GTA-AGTTGTGNGTTAGCATGTCAAGCGTGG-GATATAGTGATGTAATTGAACGAGAAAG 408
*** * *** * * ** * * * *** * ** **** * ** * * **
consensus_927#0 AGAGAGAGAGAGAGAGAGAGAGAGGGGAGAATGCATTAGGGAGATACGCAAAATACACGC 478
consensus_927#1 AGA-AAAGAGAAAAGGCGCTCCGAAAGGGTCGGCGTCTCGTA------------------ 449
*** * ***** * * * * * ** * * *
consensus_927#0 ACACCTTATAGCCTTCGTTCTTCCGCACCGATTTGATTTCTTCTTGCGAATCCAATCGCA 538
consensus_927#1 ------------------------------------------------------------
consensus_927#0 CGTCTCCTTCTTCCCTGCGTATATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAA 598
consensus_927#1 ------------------------------------------------------------
consensus_927#0 AAAAAAAAAC 608
consensus_927#1 ----------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |