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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_953#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 468 fasta sequence
[TGTCTCTGTGTTCCACCGTTCCTTCCTCCGTTAATATGTATAAGTAATATATATATATACAATGTACATAGGTACACGTACGCCGATACAAGCTTGCAACAGCTTGCAGCACTATTTACATATTGCGTTTCCTTTCTTCCGTATATATATATATATATATATATATATATATATATATATATATATAATAATAGTAGATATGTACAACGTGTGTATGTATGTGTGTGTGTGTGTATGGATCTCTAAATCGCCATTAAAATACGATTTTTCCCGGTGATCCCGGCGCAAAGGAGATGGCATGTTTATACTTTATCGCTCGGTGAAAAGTCGTCAAGTAAAGTGGGAGAGGGAGTGTGGAGTGTGTCTTCTCACGAGACGCCATTCAGAAATTTCGCATCATACAGTTTGCGCGCGCGCAATCTGTTGGCGAATAGAAGAGAGAGGAGGAGAAGGAGGCTCTGATATCGA]
[+] EMBL BI503203 [TGTCTCTGTGTTCCACCGTTCCTTCCTCCGTTAATATGTATAAGTAATATATATATATACAATGTACATAGGTACACGTACGCCGATACAAGCTTGCAACAGCTTGCAGCACTATTTACATATTGCGTTTCCTTTCTTCCGTATATATATATATATATATATATATATATATATATATATATATATAATAATAGTAGATATGTACAACGTGTGTATGTATGTGTGTGTGTGTGTATGGATCTCTAAATCGCCATTAAAATACGATTTTTCCCGGTGATCCCGGCGCAAAGGAGATGGCATGTTTATACTTTATCGCTCGGTGAAAAGTCGTCAAGTAAAGTGGGAGAGGGAGTGTGGAGTGTGTCTTCTCACGAGACGCCATTCAGAAATTTCGCATCATACAGTTTGCGCGCGCGCAATCTGTTGGCGAATAGAAGAGAGAGGAGGAGAAGGAGGCTCTGATATCGA]
consensusID : consensus_953#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 406 fasta sequence
[CTATCTAGTCGAGAATTCAAAATCGAAGCTAAAACTCTCTCTCTCTCTGTCTTTCTTTCCATCGGGCCGATAGAACCGTAACACACTGTCTCTGTGTTCCACCGTTCCTTCCTCCGTTAATATGTATAAGTAATATATATATATACAATGTACATAGGTACACATACGCCGATACAAGCTTGCAACAGCTTGCAGCACTATTTACATATTGCGTTTCCTTTCTTCCGTATATATATATATATATATATAATAATAGATATGTACAACGTGTGTATGTATATGTGTGTGTGTGTATGGATCTCTAAATCGCCATTAAAATACGATTTTTCCCGGTGATCCCGGCGCAAAGGAGATGGCATGTTTATACTTTATCGCTCGGTGAAAAGTCGTCAAGTAAAGTGGGAGA]
[+] EMBL BI514970 [CTATCTAGTCGAGAATTCAAAATCGAAGCTAAAACTCTCTCTCTCTCTGTCTTTCTTTCCATCGGGCCGATAGAACCGTAACACACTGTCTCTGTGTTCCACCGTTCCTTCCTCCGTTAATATGTATAAGTAATATATATATATACAATGTACATAGGTACACATACGCCGATACAAGCTTGCAACAGCTTGCAGCACTATTTACATATTGCGTTTCCTTTCTTCCGTATATATATATATATATATATAATAATAGATATGTACAACGTGTGTATGTATATGTGTGTGTGTGTATGGATCTCTAAATCGCCATTAAAATACGATTTTTCCCGGTGATCCCGGCGCAAAGGAGATGGCATGTTTATACTTTATCGCTCGGTGAAAAGTCGTCAAGTAAAGTGGGAGA]
[+] EMBL BI514858 [CTATCTAGTCGAGAATTCAAAATCGAAGCTAAAACTCTCTCTCTCTCTGTCTTTCTTTCCATCGGGCCGATAGAACCGTAACACACTGTCTCTGTGTTCCACCGTTCCTTCCTCCGTTAATATGTATAAGTAATATATATATATACAATGTACATAGGTACACATACGCCGATACAAGCTTGCAACAGCTTGCAGCACTATTTACATATTGCGTTTCCTTTCTTCCGTATATATATATATATATATATAATAATAGATATGTACAACGTGTGTATGTATATGTGTGTGTGTGTATGGATCTCTAAATCGCCATTAAAATACGATTTTTCCCGGTGATCCCGGCGCAAAGGAGATGGCATGTTTATACTTTATCGCTCGGTGAAAAGTCGTCAAGTAAAGTGGGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_953#0 ------------------------------------------------------------
consensus_953#1 CTATCTAGTCGAGAATTCAAAATCGAAGCTAAAACTCTCTCTCTCTCTGTCTTTCTTTCC 60
consensus_953#0 --------------------------TGTCTCTGTGTTCCACCGTTCCTTCCTCCGTTAA 34
consensus_953#1 ATCGGGCCGATAGAACCGTAACACACTGTCTCTGTGTTCCACCGTTCCTTCCTCCGTTAA 120
**********************************
consensus_953#0 TATGTATAAGTAATATATATATATACAATGTACATAGGTACACGTACGCCGATACAAGCT 94
consensus_953#1 TATGTATAAGTAATATATATATATACAATGTACATAGGTACACATACGCCGATACAAGCT 180
******************************************* ****************
consensus_953#0 TGCAACAGCTTGCAGCACTATTTACATATTGCGTTTCCTTTCTTCCGTATATATATATAT 154
consensus_953#1 TGCAACAGCTTGCAGCACTATTTACATATTGCGTTTCCTTTCTTCCGTATATATATATAT 240
************************************************************
consensus_953#0 ATATATATATATATATATATATATATATATATAATAATAGTAGATATGTACAACGTGTGT 214
consensus_953#1 ATATATATA---------------------------ATAATAGATATGTACAACGTGTGT 273
********* *** ********************
consensus_953#0 ATGTATGTGTGTGTGTGTGTATGGATCTCTAAATCGCCATTAAAATACGATTTTTCCCGG 274
consensus_953#1 ATGTATATGTGTGTGTGTGTATGGATCTCTAAATCGCCATTAAAATACGATTTTTCCCGG 333
****** *****************************************************
consensus_953#0 TGATCCCGGCGCAAAGGAGATGGCATGTTTATACTTTATCGCTCGGTGAAAAGTCGTCAA 334
consensus_953#1 TGATCCCGGCGCAAAGGAGATGGCATGTTTATACTTTATCGCTCGGTGAAAAGTCGTCAA 393
************************************************************
consensus_953#0 GTAAAGTGGGAGAGGGAGTGTGGAGTGTGTCTTCTCACGAGACGCCATTCAGAAATTTCG 394
consensus_953#1 GTAAAGTGGGAGA----------------------------------------------- 406
*************
consensus_953#0 CATCATACAGTTTGCGCGCGCGCAATCTGTTGGCGAATAGAAGAGAGAGGAGGAGAAGGA 454
consensus_953#1 ------------------------------------------------------------
consensus_953#0 GGCTCTGATATCGA 468
consensus_953#1 --------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |