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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10045#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2552 fasta sequence
[AATGCTCTATGCACCGTAACAAATTCCCGAGCAACGCAAACAACTGAACAGCGTCTGCATGCCGGCCGGTGGCCGGTGATGCCACTGCCGTCGCTGCAGCCGCAGTGAAGGCCACCGGCGAGCGAGACAACCACCTCTCCGACTCCCCAATAAATACACACCTGTTGCTGCTGCTCCTGTGTTTTTTTTTTTTTTACTTGTAAGGTGTTCGTCTGTGTGTGTAAATACCATCGACGAATTCTGCGTGCTACAGGAGGAAGCTGTTCACGCGGCCGTCGACGACTGTATCAAATGGTGGTGATGATCTCTCGCTGCAATTCGTTCATGTGGTTCTCGTCGCCAGGCTGACGCCGGCGAGGTCGCCGCCGTACTCCTCCAGCACCACCAGCAGGTTGCCGCCCGGCTTCAGCCATGATCTCGGCACATGGTACCTGAAATTTTATCCAAAATAGTAGGTCGCCGCAGTTGGACCGGCACTTGTCCTCGTGGTACGTCCCGGCGTAGCTGCAGCCGCCGCAGCCACCGGAGGCCTTGTACGACCAGTACCGGCCGACGTGGTGGCCGTTCACCCAGAGCTGGCCCTTCCCCATGCTGCCCATGTCGAGCGCCACTGGGTCGTTCCCGGCCGGCGCGTTGAAGAAAGCCTGAGACAATCAATGGTGACAAAAGGAAATTCAGCAACAGGTGACACAAATTCAGTCTGAGCGTGATGAAACTGTAATTCCACTTTGTCATTGCTGGTGCTTCTTCAGAATTCAGCACTTACCTTGTGCCAAGTCAGTGGCTGGTAGCCGCCAGGGCCACCCCATTCGACTGCGGAGCTTCCGGTGACGGTGTGGAGACCCAGCGTTTCGCCTTTCAGGCCGACCTGATAGGTCCATTTCTGATGGCTGAGGTCTTTTGTGCCCCCATTTAGGCTGGAGAGGGTCACCGGTCCGAGCACTCCGACATTCCAGTTCTCAAAATGGTTGCCAACATTCTGAAAATGGTATCAGATATCAGTGTTACAGGTAGTTTGAGACAAGATATAAGTGTCCGGGATATCAGTTAAGCTGTGATCAACTCACAGGGAGGCCAACTGCTGAACTTAGGATGGAGATCTTGTTGCTGCCCTGCCACATCTTGACACGTCCATTGTATGTCAGCTTCGGGTTGTCGTAACCACCATAAACAGATCCTACGGAGGAAGCAAAATCATGAACATTCACTAAAATGATTGGTGTTGGCTTGATCTAACATGAAATGTAGCTAAGTGCCAGTACCATATGATTTCCCGTTCACGAACACCTGCATCGAGTGCCCAGCGGAGTAGACAGTGAGCTGAGGAGACTGACCAGACCTCAAGTCATTTGTACCAATGTTGACGCTGCAACAAGAATTCATCAGGGTTAAGGGAAAATTCATATGGCTTCTAATAGAAATGGTTGAAATTTTGTCACATATCAAGGTTGGTCACTCACTATGTGGTGTACCACAGGTAGTCTGACTTGTCCCATGTCATGCTCAGCTGCTCAACAAGGCCATCCTTCGTGAACGCGCTGTCGCTCAGCGAGTTTGTGTCCTCGCTATATGACTGCCAAGCGAATCGAACCACTGGGTTCATCTTTGGCATCAATGTTGGCTCCTTCACCTGTGCCATTATCATGTAAGTACATTAGACCATGTGCTCCAGCAAGGTCCAGCTAGTCCACATAAAGGTTCAAGCTTCAGTGTTCCCTAACCGTTGCAGTGTTGAAGACGGCAGTTTTGCAGTCCGGCAGAATGCTGATGGACCAAGCAGGAAGGTTGTACTGCTGCCCATTGAACCTGACTTTGACTGCAGTGTTCATGTGGTAGTTCGACAGGAACGCCGCGCATGCTCCATTCTTTGCCTTGAAGACATATGCCTAAAGGATTTGACCAATTATGAATCTAGGAATATCTATGGATGATCACATATATTGTGTGCAAGATTGTAGCAACACCAACCTTCTCATAGCTGCCAATAGACTCTATTGTCGGATCGGCAGAAACCAGCACAGGCTCAGCCTGCTTGATGGCCCTGTGAAGGTCTCTCAAGTGACCCCATTTCGGTTGCCTAAGCAGACCTGAGATGTACATGCCATCCGTTTATCAACTGAGTCAGATCCATGTCAATCAAGATTATAAACAGAAGATAAAAAACAGCAAATTTCCGAAAATATCTCAAGAAGGCAGGCAGGAATTCAAGTTTATCAAAGAAGGCAATCACTGCATACCAAATTCGTCAATCGGAGCATCATAATCATAGCTGGTTGCAATGAAGGGACCACCAGCTGTCCGGCCAAAATTGGTTCCTCCATGGTACTGCACCAGAACATGAAATGCGGTCAGAACAAGTAAAACTACATTCACTGCAACACCAGTGTTGGTGTGACCAGTGAGCCCCCTCTCTTCTCACCATGTAATAGTTCACGAAAGAGCCACCCTTCTGTATGAACCTCGCCACGGCAAAAGCCAGATCCTCCACTGGCCGATGCGGCACCCCACCTCCGAACGATGTAAACCTTCACGCGCAGTAAAATGTAAAACCG]
[+] EMBL AK119269 [AATGCTCTATGCACCGTAACAAATTCCCGAGCAACGCAAACAACTGAACAGCGTCTGCATGCCGGCCGGTGGCCGGTGATGCCACTGCCGTCGCTGCAGCCGCAGTGAAGGCCACCGGCGAGCGAGACAACCACCTCTCCGACTCCCCAATAAATACACACCTGTTGCTGCTGCTCCTGTGTTTTTTTTTTTTTTACTTGTAAGGTGTTCGTCTGTGTGTGTAAATACCATCGACGAATTCTGCGTGCTACAGGAGGAAGCTGTTCACGCGGCCGTCGACGACTGTATCAAATGGTGGTGATGATCTCTCGCTGCAATTCGTTCATGTGGTTCTCGTCGCCAGGCTGACGCCGGCGAGGTCGCCGCCGTACTCCTCCAGCACCACCAGCAGGTTGCCGCCCGGCTTCAGCCATGATCTCGGCACATGGTACCTGAAATTTTATCCAAAATAGTAGGTCGCCGCAGTTGGACCGGCACTTGTCCTCGTGGTACGTCCCGGCGTAGCTGCAGCCGCCGCAGCCACCGGAGGCCTTGTACGACCAGTACCGGCCGACGTGGTGGCCGTTCACCCAGAGCTGGCCCTTCCCCATGCTGCCCATGTCGAGCGCCACTGGGTCGTTCCCGGCCGGCGCGTTGAAGAAAGCCTGAGACAATCAATGGTGACAAAAGGAAATTCAGCAACAGGTGACACAAATTCAGTCTGAGCGTGATGAAACTGTAATTCCACTTTGTCATTGCTGGTGCTTCTTCAGAATTCAGCACTTACCTTGTGCCAAGTCAGTGGCTGGTAGCCGCCAGGGCCACCCCATTCGACTGCGGAGCTTCCGGTGACGGTGTGGAGACCCAGCGTTTCGCCTTTCAGGCCGACCTGATAGGTCCATTTCTGATGGCTGAGGTCTTTTGTGCCCCCATTTAGGCTGGAGAGGGTCACCGGTCCGAGCACTCCGACATTCCAGTTCTCAAAATGGTTGCCAACATTCTGAAAATGGTATCAGATATCAGTGTTACAGGTAGTTTGAGACAAGATATAAGTGTCCGGGATATCAGTTAAGCTGTGATCAACTCACAGGGAGGCCAACTGCTGAACTTAGGATGGAGATCTTGTTGCTGCCCTGCCACATCTTGACACGTCCATTGTATGTCAGCTTCGGGTTGTCGTAACCACCATAAACAGATCCTACGGAGGAAGCAAAATCATGAACATTCACTAAAATGATTGGTGTTGGCTTGATCTAACATGAAATGTAGCTAAGTGCCAGTACCATATGATTTCCCGTTCACGAACACCTGCATCGAGTGCCCAGCGGAGTAGACAGTGAGCTGAGGAGACTGACCAGACCTCAAGTCATTTGTACCAATGTTGACGCTGCAACAAGAATTCATCAGGGTTAAGGGAAAATTCATATGGCTTCTAATAGAAATGGTTGAAATTTTGTCACATATCAAGGTTGGTCACTCACTATGTGGTGTACCACAGGTAGTCTGACTTGTCCCATGTCATGCTCAGCTGCTCAACAAGGCCATCCTTCGTGAACGCGCTGTCGCTCAGCGAGTTTGTGTCCTCGCTATATGACTGCCAAGCGAATCGAACCACTGGGTTCATCTTTGGCATCAATGTTGGCTCCTTCACCTGTGCCATTATCATGTAAGTACATTAGACCATGTGCTCCAGCAAGGTCCAGCTAGTCCACATAAAGGTTCAAGCTTCAGTGTTCCCTAACCGTTGCAGTGTTGAAGACGGCAGTTTTGCAGTCCGGCAGAATGCTGATGGACCAAGCAGGAAGGTTGTACTGCTGCCCATTGAACCTGACTTTGACTGCAGTGTTCATGTGGTAGTTCGACAGGAACGCCGCGCATGCTCCATTCTTTGCCTTGAAGACATATGCCTAAAGGATTTGACCAATTATGAATCTAGGAATATCTATGGATGATCACATATATTGTGTGCAAGATTGTAGCAACACCAACCTTCTCATAGCTGCCAATAGACTCTATTGTCGGATCGGCAGAAACCAGCACAGGCTCAGCCTGCTTGATGGCCCTGTGAAGGTCTCTCAAGTGACCCCATTTCGGTTGCCTAAGCAGACCTGAGATGTACATGCCATCCGTTTATCAACTGAGTCAGATCCATGTCAATCAAGATTATAAACAGAAGATAAAAAACAGCAAATTTCCGAAAATATCTCAAGAAGGCAGGCAGGAATTCAAGTTTATCAAAGAAGGCAATCACTGCATACCAAATTCGTCAATCGGAGCATCATAATCATAGCTGGTTGCAATGAAGGGACCACCAGCTGTCCGGCCAAAATTGGTTCCTCCATGGTACTGCACCAGAACATGAAATGCGGTCAGAACAAGTAAAACTACATTCACTGCAACACCAGTGTTGGTGTGACCAGTGAGCCCCCTCTCTTCTCACCATGTAATAGTTCACGAAAGAGCCACCCTTCTGTATGAACCTCGCCACGGCAAAAGCCAGATCCTCCACTGGCCGATGCGGCACCCCACCTCCGAACGATGTAAACCTTCACGCGCAGTAAAATGTAAAACCG]
consensusID : consensus_10045#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2009 fasta sequence
[GGCCCTCTAGAGAGCTTTTAACAACTTCAACTTCTCGTAAAATCTCCAACACATCAAACAGTTTTCCTAAAAATGGATAGCTACAGACAATAACGGATTGACAAAACTATTTGTGATTTCCTGCATAATCAATTCTCACAA-CTAGTAATACTAGTAATTTATAATGTCGACAAAGATTACAAGTTACAATAACAAATGCTCTATGCACCGTAACAAATTCCCGAGCAACGCAAACAACTGAACAGCGTCTGCATGCCGGCCGGTGGCCGGTGATGCCACTGCCGTCGCTGCAGCCGCAGTGAAGGCCACCGGCGAGCGAGACAACCACCTCTCCGACTCCCCAATAAATACACACCTGTTGCTGCTGCTCCTGTG-TTTTTTTTTTTTACTTGTAAGGTGTTCGTCTGTGTGTGTAAATACCATCGACGAATTCTGCGTGCTACAGGAGGAAGCTGTTCACGCGGC-CGTCGACGAC-TGTATCAA-ATGGTGGTGATGATCTCTCG-CTGCAATTCGTTCATGTGGTTCTCGTCGCCAGGCTGACGCCGGCGAGGTCGCCGCCGTACTCCTCCAG-CACCACCAGCAGGTTGCCGCCCGGCTTCAGCCATGATCTCGGCACATGGTACCATC-TTTGGGACAGGTCGCCGCAGTTGGACCGGCAC-TTGTCCTCGTGGTACGTCCCGGCGTAGCTGCAGCCGCCGCAGCCACCGGAGGCCTTGTACGACCAGTACCGGCCGACGTGGTGGCCGTTCACCCAGAGCTGGCCCTTCCCCATGCTGCCCATGTCGAGCGCCACTGGGTCGTTCCCGGCCGGCGCGTTGAAGAAAGCCTTGTGCCAAGTCAGTGGCTGGTAGCCGCCAGGGCCACCCCATTCGACTGCGGAGCTTCCGGTGACGGTGTGGAGACCCAGCGTTTCGCCTTTCAGGCCGACCTGATAGGTCCATTTCTGATGGCTGAGGTCTTTTGTGCCCCCATTTAGGCTGGAGAGGGTCACCGGTCCGAGCACTCCGACATTCCAGTTCTCAAAATGGTTGCCAACATTAGGGAGGCCAACTGCTGAACTTAGGATGGAGATCTTGTTGCTGCCCTGCCACATCTTGACACGTCCATTGTATGTCAGCTTCGGGTTGTCGTAACCACCATAAACAGATCCATATGATTTCCCGTTCACGAACACCTGCATCGAGTGCCCAGCGGAGTAGACAGTGAGCTGAGGAGACTGACCAGACCTCAAGTCATTTGTACCAATGTTGACGTATGTGGTGTACCACAGGTAGTCTGACTTGTCCCATGTCATGCTCAGCTGCTCAACAAGGCCATCCTTCGTGAACGCGCTGTCGCTCAGCGAGTTTGTGTCCTCGCTATATGACTGCCAAGCGAATCGAACCACTGGGTTCATCTTTGGCATCAATGTTGGCTCCTTCACCGTTGCAGTGTTGAAGACGGCAGTTTTGCAGTCCGGCAGAATGCTGATGGACCAAGCAGGAAGGTTGTACTGCTGCCCATTGAACCTGACTTTGACTGCAGTGTTCATGTGGTAGTTCGACAGGAACGCCGCGCATGCTCCATTCTTTGCCTTGAAGACATATGCCTTCTCATAGCTGCCAATAGACTCTATTGTCGGATCGGCAGAAACCAGCACAGGCTCAGCCTGCTTGATGGCCCTGTGAAGGTCTCTCAAGTGACCCCATTTCGGTTGCCTAAGCAGACCAAATTCGTCAATCGGAGCATCATAATCATAGCTGGTTGCAATGAAGGGACCACCAGCTGTCCGGCCAAAATTGGTTCCTCCATGGTACATGTAATAGTTCACGAAAGAGCCACCCTTCTGTATGAACCTCGCCACGGCAAAAGCCAGATCCTCCACTGGCCGATGCGGCACCCCACCTCCGAACGATGTAAACCAGCCGGTCCAGGCCTCAGTCCACATGGACGGCTTGTAATTCTTGTTTGGGCTGAAGTAGTCGCAGTAAAATCCATTGCAAGTGTTGATCACTGGGTCAGGGGCGTCG]
[-] EMBL AK059794 [GGCCCTCTAGAGAGCTTTTAACAACTTCAACTTCTCGTAAAATCTCCAACACATCAAACAGTTTTCCTAAAAATGGATAGCTACAGACAATAACGGATTGACAAAACTATTTGTGATTTCCTGCATAATCAATTCTCACAA CTAGTAATACTAGTAATTTATAATGTCGACAAAGATTACAAGTTACAATAACAAATGCTCTATGCACCGTAACAAATTCCCGAGCAACGCAAACAACTGAACAGCGTCTGCATGCCGGCCGGTGGCCGGTGATGCCACTGCCGTCGCTGCAGCCGCAGTGAAGGCCACCGGCGAGCGAGACAACCACCTCTCCGACTCCCCAATAAATACACACCTGTTGCTGCTGCTCCTGTG TTTTTTTTTTTTACTTGTAAGGTGTTCGTCTGTGTGTGTAAATACCATCGACGAATTCTGCGTGCTACAGGAGGAAGCTGTTCACGCGGC CGTCGACGAC TGTATCAA ATGGTGGTGATGATCTCTCG CTGCAATTCGTTCATGTGGTTCTCGTCGCCAGGCTGACGCCGGCGAGGTCGCCGCCGTACTCCTCCAG CACCACCAGCAGGTTGCCGCCCGGCTTCAGCCATGATCTCGGCACATGGTACCATC TTTGGGACAGGTCGCCGCAGTTGGACCGGCAC TTGTCCTCGTGGTACGTCCCGGCGTAGCTGCAGCCGCCGCAGCCACCGGAGGCCTTGTACGACCAGTACCGGCCGACGTGGTGGCCGTTCACCCAGAGCTGGCCCTTCCCCATGCTGCCCATGTCGAGCGCCACTGGGTCGTTCCCGGCCGGCGCGTTGAAGAAAGCCTTGTGCCAAGTCAGTGGCTGGTAGCCGCCAGGGCCACCCCATTCGACTGCGGAGCTTCCGGTGACGGTGTGGAGACCCAGCGTTTCGCCTTTCAGGCCGACCTGATAGGTCCATTTCTGATGGCTGAGGTCTTTTGTGCCCCCATTTAGGCTGGAGAGGGTCACCGGTCCGAGCACTCCGACATTCCAGTTCTCAAAATGGTTGCCAACATTAGGGAGGCCAACTGCTGAACTTAGGATGGAGATCTTGTTGCTGCCCTGCCACATCTTGACACGTCCATTGTATGTCAGCTTCGGGTTGTCGTAACCACCATAAACAGATCCATATGATTTCCCGTTCACGAACACCTGCATCGAGTGCCCAGCGGAGTAGACAGTGAGCTGAGGAGACTGACCAGACCTCAAGTCATTTGTACCAATGTTGACGTATGTGGTGTACCACAGGTAGTCTGACTTGTCCCATGTCATGCTCAGCTGCTCAACAAGGCCATCCTTCGTGAACGCGCTGTCGCTCAGCGAGTTTGTGTCC ]
[-] EMBL AK061043 [ TTTGTGATTTCCTGCATAATCAATTCTCACAA CTAGTAATACTAGTAATTTATAATGTCGACAAAGATTACAAGTTACAATAACAAATGCTCTATGCACCGTAACAAATTCCCGAGCAACGCAAACAACTGAACAGCGTCTGCATGCCGGCCGGTGGCCGGTGATGCCACTGCCGTCGCTGCAGCCGCAGTGAAGGCCACCGGCGAGCGAGACAACCACCTCTCCGACTCCCCAATAAATACACACCTGTTGCTGCTGCTCCTGTG TTTTTTTTTTTTACTTGTAAGGTGTTCGTCTGTGTGTGTAAATACCATCGACGAATTCTGCGTGCTACAGGAGGAAGCTGTTCACGCGGC CGTCGACGAC TGTATCAA ATGGTGGTGATGATCTCTCG CTGCAATTCGTTCATGTGGTTCTCGTCGCCAGGCTGACGCCGGCGAGGTCGCCGCCGTACTCCTCCAG CACCACCAGCAGGTTGCCGCCCGGCTTCAGCCATGATCTCGGCACATGGTACCATC TTTGGGACAGGTCGCCGCAGTTGGACCGGCAC TTGTCCTCGTGGTACGTCCCGGCGTAGCTGCAGCCGCCGCAGCCACCGGAGGCCTTGTACGACCAGTACCGGCCGACGTGGTGGCCGTTCACCCAGAGCTGGCCCTTCCCCATGCTGCCCATGTCGAGCGCCACTGGGTCGTTCCCGGCCGGCGCGTTGAAGAAAGCCTTGTGCCAAGTCAGTGGCTGGTAGCCGCCAGGGCCACCCCATTCGACTGCGGAGCTTCCGGTGACGGTGTGGAGACCCAGCGTTTCGCCTTTCAGGCCGACCTGATAGGTCCATTTCTGATGGCTGAGGTCTTTTGTGCCCCCATTTAGGCTGGAGAGGGTCACCGGTCCGAGCACTCCGACATTCCAGTTCTCAAAATGGTTGCCAACATTAGGGAGGCCAACTGCTGAACTTAGGATGGAGATCTTGTTGCTGCCCTGCCACATCTTGA ]
[-] EMBL BI805861 [ ttttttTTTTCACAAGCTAGTAATACTAGTAATTTATAATGTCGACAAAGATTACAAGTTACAATAACAAATGCTCTATGCACCGTAACAAATTCCCGAGCAACGCAAACAACTGAACAGCGTCTGCATGCCGGCCGGTGGCCGGTGATGCCACTGCCGTCGCTGCAGCCGCAGTGAAGGCCACCGGCGAGCGAGACAACCACCTCTCCGACTCCCCAATAAATACACACCTGTTGCTGCTGCTCCTGTGTTTTTTTTTTTTTACTTGTAAGGTGTTCGTCTGTGTGTGTAAATACCATCGACGAATTCTGCGTGCTACAGGAGGAAGCTGTTCACGCGGCACGTCGACGACGTGTATCAACATGGTGGTGATGATCTCTCG CTGCAATTCGTTCATGTGGTTCTCGTCGCCAGGCTGACGCCGGCGAGGTCGCCGCCGTACTCCTCCAGACA CACCAGCAGGTTGCCGCCCGGCTTCAGCCATGATCTCGGCACATGGTACCATCTTTTGGGACAGGTCG CG AGTTGGACCGGCACTTTGTCCTCGTGG ]
[-] EMBL BI806968 [ TTTTTACTTGTANGGNGTGCGTCTGTGTGTGTAAATACCATCGACGAATTCTGCGTGCTACAGGAGGAAGCTGTTCACGCGG CGTCGACGAC TGTATCAA ATGGTGGTGATGATCTCTCGACTGCAATTCGTTCATGTGGTTCTCGTCGCCAGGCTGACGCCGGCGAGGTCGCCGCCGTACTCCTCCAG CACCACCAGCAGGTTGCCGNCCGGCTTCAGCCATGATCTCGGCACATGGTACCATC TTTGGGACAGGTCGCCGCA TTGGACCGGCAC TTGTCCTCGTGGTACGTCCCGGCGTAACTGCAGACG CGCAGCCACCGGAGGCCTTGTACGAACAGT ]
[-] EMBL AK059059 [ TGTTCGTCTGTGTGTGTAAATACCATCGACGAATTCTGCGTGCTACAGGAGGAAGCTGTTCACGCGGC CGTCGACGAC TGTATCAA ATGGTGGTGATGATCTCTCG CTGCAATTCGTTCATGTGGTTCTCGTCGCCAGGCTGACGCCGGCGAGGTCGCCGCCGTACTCCTCCAG CACCACCAGCAGGTTGCCGCCCGGCTTCAGCCATGATCTCGGCACATGGTACCATC TTTGGGACAGGTCGCCGCAGTTGGACCGGCAC TTGTCCTCGTGGTACGTCCCGGCGTAGCTGCAGCCGCCGCAGCCACCGGAGGCCTTGTACGACCAGTACCGGCCGACGTGGTGGCCGTTCACCCAGAGCTGGCCCTTCCCCATGCTGCCCATGTCGAGCGCCACTGGGTCGTTCCCGGCCGGCGCGTTGAAGAAAGCCTTGTGCCAAGTCAGTGGCTGGTAGCCGCCAGGGCCACCCCATTCGACTGCGGAGCTTCCGGTGACGGTGTGGAGACCCAGCGTTTCGCCTTTCAGGCCGACCTGATAGGTCCATTTCTGATGGCTGAGGTCTTTTGTGCCCCCATTTAGGCTGGAGAGGGTCACCGGTCCGAGCACTCCGACATTCCAGTTCTCAAAATGGTTGCCAACATTAGGGAGGCCAACTGCTGAACTTAGGATGGAGATCTTGTTGCTGCCCTGCCACATCTTGACACGTCCATTGTATGTCAGCTTCGGGTTGTCGTAACCACCATAAACAGATCCATATGATTTCCCGTTCACGAACACCTGCATCGAGTGCCCAGCGGAGTAGACAGTGAGCTGAGGAGACTGACCAGACCTCAAGTCATTTGTACCAATGTTGACGTATGTGGTGTACCACAGGTAGTCTGACTTGTCCCATGTCATGCTCAGCTGCTCAACAAGGCCATCCTTCGTGAACGCGCTGTCGCTCAGCGAGTTTGTGTCCTCGCTATATGACTGCCAAGCGAATCGAACCACTGGGTTCATCTTTGGCATCAATGTTGGCTCCTTCACCGTTGCAGTGTTGAAGACGGCAGTTTTGCAGTCCGGCAGAATGCTGATGGACCAAGCAGGAAGGTTGTACTGCTGCCCATTGAACCTGACTTTGACTGCAGTGTTCATGTGGTAGTTCGACAGGAACGCCGCGCATGCTCCATTCTTTGCCTTGAAGACATATGCCTTCTCATAGCTGCCAATAGACTCTATTGTCGGATCGGCAGAAACCAGCACAGGCTCAGCCTGCTTGATGGCCCTGTGAAGGTCTCTCAAGTGACCCCATTTCGGTTGCCTAAGCAGACCAAATTCGTCAATCGGAGCATCATAATCATAGCTGGTTGCAATGAAGGGACCACCAGCTGTCCGGCCAAAATTGGTTCCTCCATGGTACATGTAATAGTTCACGAAAGAGCCACCCTTCTGTATGAACCTCGCCACGGCAAAAGCCAGATCCTCCACTGGCCGATGCGGCACCCCACCTCCGAACGATGTAAACCAGCCGGTCCAGGCCTCAGTCCACATGGACGGCTTGTAATTCTTGTTTGGGCTGAAGTAGTCGCAGTAAAATCCATTGCAAGTGTTGATCACTGGGTCAGGGGCGTCG]
[-] EMBL OSYK7 [ GTCTGTGTGTGTAAATACCATCGACGAATTCTGCGTGCTACAGGAGGAAGCTGTTCACGCGGC CGTCGACGAC TGTATCAA ATGGTGGTGATGATCTCTCG CTGCAATTCGTTCATGTGGTTCTCGTCGCCAGGCTGACGCCGGCGAGGTCGCCGCCGTACTTCTTCAG CACCACCAGCAGGTTGCCGCCCCGGTTCAGCCATGATCTTGGCACATGGTACCATCTTTTGGGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10045#0 ------------------------------------------------------------
consensus_10045#1 GGCCCTCTAGAGAGCTTTTAACAACTTCAACTTCTCGTAAAATCTCCAACACATCAAACA 60
consensus_10045#0 ------------------------------------------------------------
consensus_10045#1 GTTTTCCTAAAAATGGATAGCTACAGACAATAACGGATTGACAAAACTATTTGTGATTTC 120
consensus_10045#0 ------------------------------------------------------------
consensus_10045#1 CTGCATAATCAATTCTCACAACTAGTAATACTAGTAATTTATAATGTCGACAAAGATTAC 180
consensus_10045#0 --------------AATGCTCTATGCACCGTAACAAATTCCCGAGCAACGCAAACAACTG 46
consensus_10045#1 AAGTTACAATAACAAATGCTCTATGCACCGTAACAAATTCCCGAGCAACGCAAACAACTG 240
**********************************************
consensus_10045#0 AACAGCGTCTGCATGCCGGCCGGTGGCCGGTGATGCCACTGCCGTCGCTGCAGCCGCAGT 106
consensus_10045#1 AACAGCGTCTGCATGCCGGCCGGTGGCCGGTGATGCCACTGCCGTCGCTGCAGCCGCAGT 300
************************************************************
consensus_10045#0 GAAGGCCACCGGCGAGCGAGACAACCACCTCTCCGACTCCCCAATAAATACACACCTGTT 166
consensus_10045#1 GAAGGCCACCGGCGAGCGAGACAACCACCTCTCCGACTCCCCAATAAATACACACCTGTT 360
************************************************************
consensus_10045#0 GCTGCTGCTCCTGTGTTTTTTTTTTTTTTACTTGTAAGGTGTTCGTCTGTGTGTGTAAAT 226
consensus_10045#1 GCTGCTGCTCCTGTGTTTTTTTTTTT--TACTTGTAAGGTGTTCGTCTGTGTGTGTAAAT 418
************************** ********************************
consensus_10045#0 ACCATCGACGAATTCTGCGTGCTACAGGAGGAAGCTGTTCACGCGGCCGTCGACGACTGT 286
consensus_10045#1 ACCATCGACGAATTCTGCGTGCTACAGGAGGAAGCTGTTCACGCGGCCGTCGACGACTGT 478
************************************************************
consensus_10045#0 ATCAAATGGTGGTGATGATCTCTCGCTGCAATTCGTTCATGTGGTTCTCGTCGCCAGGCT 346
consensus_10045#1 ATCAAATGGTGGTGATGATCTCTCGCTGCAATTCGTTCATGTGGTTCTCGTCGCCAGGCT 538
************************************************************
consensus_10045#0 GACGCCGGCGAGGTCGCCGCCGTACTCCTCCAGCACCACCAGCAGGTTGCCGCCCGGCTT 406
consensus_10045#1 GACGCCGGCGAGGTCGCCGCCGTACTCCTCCAGCACCACCAGCAGGTTGCCGCCCGGCTT 598
************************************************************
consensus_10045#0 CAGCCATGATCTCGGCACATGGTACCTGAAATTTTATCCAAAATAGTAGGTCGCCGCAGT 466
consensus_10045#1 CAGCCATGATCTCGGCACATGGTACC----ATCTTT------GGGACAGGTCGCCGCAGT 648
************************** ** ** *************
consensus_10045#0 TGGACCGGCACTTGTCCTCGTGGTACGTCCCGGCGTAGCTGCAGCCGCCGCAGCCACCGG 526
consensus_10045#1 TGGACCGGCACTTGTCCTCGTGGTACGTCCCGGCGTAGCTGCAGCCGCCGCAGCCACCGG 708
************************************************************
consensus_10045#0 AGGCCTTGTACGACCAGTACCGGCCGACGTGGTGGCCGTTCACCCAGAGCTGGCCCTTCC 586
consensus_10045#1 AGGCCTTGTACGACCAGTACCGGCCGACGTGGTGGCCGTTCACCCAGAGCTGGCCCTTCC 768
************************************************************
consensus_10045#0 CCATGCTGCCCATGTCGAGCGCCACTGGGTCGTTCCCGGCCGGCGCGTTGAAGAAAGCCT 646
consensus_10045#1 CCATGCTGCCCATGTCGAGCGCCACTGGGTCGTTCCCGGCCGGCGCGTTGAAGAAAGCCT 828
************************************************************
consensus_10045#0 GAGACAATCAATGGTGACAAAAGGAAATTCAGCAACAGGTGACACAAATTCAGTCTGAGC 706
consensus_10045#1 ------------------------------------------------------------
consensus_10045#0 GTGATGAAACTGTAATTCCACTTTGTCATTGCTGGTGCTTCTTCAGAATTCAGCACTTAC 766
consensus_10045#1 ------------------------------------------------------------
consensus_10045#0 CTTGTGCCAAGTCAGTGGCTGGTAGCCGCCAGGGCCACCCCATTCGACTGCGGAGCTTCC 826
consensus_10045#1 --TGTGCCAAGTCAGTGGCTGGTAGCCGCCAGGGCCACCCCATTCGACTGCGGAGCTTCC 886
**********************************************************
consensus_10045#0 GGTGACGGTGTGGAGACCCAGCGTTTCGCCTTTCAGGCCGACCTGATAGGTCCATTTCTG 886
consensus_10045#1 GGTGACGGTGTGGAGACCCAGCGTTTCGCCTTTCAGGCCGACCTGATAGGTCCATTTCTG 946
************************************************************
consensus_10045#0 ATGGCTGAGGTCTTTTGTGCCCCCATTTAGGCTGGAGAGGGTCACCGGTCCGAGCACTCC 946
consensus_10045#1 ATGGCTGAGGTCTTTTGTGCCCCCATTTAGGCTGGAGAGGGTCACCGGTCCGAGCACTCC 1006
************************************************************
consensus_10045#0 GACATTCCAGTTCTCAAAATGGTTGCCAACATTCTGAAAATGGTATCAGATATCAGTGTT 1006
consensus_10045#1 GACATTCCAGTTCTCAAAATGGTTGCCAACATT--------------------------- 1039
*********************************
consensus_10045#0 ACAGGTAGTTTGAGACAAGATATAAGTGTCCGGGATATCAGTTAAGCTGTGATCAACTCA 1066
consensus_10045#1 ------------------------------------------------------------
consensus_10045#0 CAGGGAGGCCAACTGCTGAACTTAGGATGGAGATCTTGTTGCTGCCCTGCCACATCTTGA 1126
consensus_10045#1 -AGGGAGGCCAACTGCTGAACTTAGGATGGAGATCTTGTTGCTGCCCTGCCACATCTTGA 1098
***********************************************************
consensus_10045#0 CACGTCCATTGTATGTCAGCTTCGGGTTGTCGTAACCACCATAAACAGATCCTACGGAGG 1186
consensus_10045#1 CACGTCCATTGTATGTCAGCTTCGGGTTGTCGTAACCACCATAAACAGATCC-------- 1150
****************************************************
consensus_10045#0 AAGCAAAATCATGAACATTCACTAAAATGATTGGTGTTGGCTTGATCTAACATGAAATGT 1246
consensus_10045#1 ------------------------------------------------------------
consensus_10045#0 AGCTAAGTGCCAGTACCATATGATTTCCCGTTCACGAACACCTGCATCGAGTGCCCAGCG 1306
consensus_10045#1 -----------------ATATGATTTCCCGTTCACGAACACCTGCATCGAGTGCCCAGCG 1193
*******************************************
consensus_10045#0 GAGTAGACAGTGAGCTGAGGAGACTGACCAGACCTCAAGTCATTTGTACCAATGTTGACG 1366
consensus_10045#1 GAGTAGACAGTGAGCTGAGGAGACTGACCAGACCTCAAGTCATTTGTACCAATGTTGACG 1253
************************************************************
consensus_10045#0 CTGCAACAAGAATTCATCAGGGTTAAGGGAAAATTCATATGGCTTCTAATAGAAATGGTT 1426
consensus_10045#1 ------------------------------------------------------------
consensus_10045#0 GAAATTTTGTCACATATCAAGGTTGGTCACTCACTATGTGGTGTACCACAGGTAGTCTGA 1486
consensus_10045#1 ----------------------------------TATGTGGTGTACCACAGGTAGTCTGA 1279
**************************
consensus_10045#0 CTTGTCCCATGTCATGCTCAGCTGCTCAACAAGGCCATCCTTCGTGAACGCGCTGTCGCT 1546
consensus_10045#1 CTTGTCCCATGTCATGCTCAGCTGCTCAACAAGGCCATCCTTCGTGAACGCGCTGTCGCT 1339
************************************************************
consensus_10045#0 CAGCGAGTTTGTGTCCTCGCTATATGACTGCCAAGCGAATCGAACCACTGGGTTCATCTT 1606
consensus_10045#1 CAGCGAGTTTGTGTCCTCGCTATATGACTGCCAAGCGAATCGAACCACTGGGTTCATCTT 1399
************************************************************
consensus_10045#0 TGGCATCAATGTTGGCTCCTTCACCTGTGCCATTATCATGTAAGTACATTAGACCATGTG 1666
consensus_10045#1 TGGCATCAATGTTGGCTCCTTCACC----------------------------------- 1424
*************************
consensus_10045#0 CTCCAGCAAGGTCCAGCTAGTCCACATAAAGGTTCAAGCTTCAGTGTTCCCTAACCGTTG 1726
consensus_10045#1 --------------------------------------------------------GTTG 1428
****
consensus_10045#0 CAGTGTTGAAGACGGCAGTTTTGCAGTCCGGCAGAATGCTGATGGACCAAGCAGGAAGGT 1786
consensus_10045#1 CAGTGTTGAAGACGGCAGTTTTGCAGTCCGGCAGAATGCTGATGGACCAAGCAGGAAGGT 1488
************************************************************
consensus_10045#0 TGTACTGCTGCCCATTGAACCTGACTTTGACTGCAGTGTTCATGTGGTAGTTCGACAGGA 1846
consensus_10045#1 TGTACTGCTGCCCATTGAACCTGACTTTGACTGCAGTGTTCATGTGGTAGTTCGACAGGA 1548
************************************************************
consensus_10045#0 ACGCCGCGCATGCTCCATTCTTTGCCTTGAAGACATATGCCTAAAGGATTTGACCAATTA 1906
consensus_10045#1 ACGCCGCGCATGCTCCATTCTTTGCCTTGAAGACATATGCCT------------------ 1590
******************************************
consensus_10045#0 TGAATCTAGGAATATCTATGGATGATCACATATATTGTGTGCAAGATTGTAGCAACACCA 1966
consensus_10045#1 ------------------------------------------------------------
consensus_10045#0 ACCTTCTCATAGCTGCCAATAGACTCTATTGTCGGATCGGCAGAAACCAGCACAGGCTCA 2026
consensus_10045#1 ----TCTCATAGCTGCCAATAGACTCTATTGTCGGATCGGCAGAAACCAGCACAGGCTCA 1646
********************************************************
consensus_10045#0 GCCTGCTTGATGGCCCTGTGAAGGTCTCTCAAGTGACCCCATTTCGGTTGCCTAAGCAGA 2086
consensus_10045#1 GCCTGCTTGATGGCCCTGTGAAGGTCTCTCAAGTGACCCCATTTCGGTTGCCTAAGCAGA 1706
************************************************************
consensus_10045#0 CCTGAGATGTACATGCCATCCGTTTATCAACTGAGTCAGATCCATGTCAATCAAGATTAT 2146
consensus_10045#1 CCAAATTCGT-----CAATCGGAGCATCA--TAATCATAGCTGGTTGCAATGAAGG---- 1755
** * ** * *** * **** * * * **** ***
consensus_10045#0 AAACAGAAGATAAAAAACAGCAAATTTCCGAAAATATCTCAAGAAGGCAGGCAGGAATTC 2206
consensus_10045#1 GACCACCAGCTGTCCGGC--CAAAATT-----GGTTCCTCCATGGTACATGTAATAGTTC 1808
* ** ** * * **** ** * *** * ** * * * ***
consensus_10045#0 AAGTTTATCAAAGAAGGCAATCACTGCATACCAAATTCGTCAATCGGAGCATCATAATCA 2266
consensus_10045#1 ACG--------AAAGAGCCACCCTTCTGTATGAACCTCGCCACGGCAAAAGCCAGATCCT 1860
* * * * ** * * * ** ** *** ** * ** * *
consensus_10045#0 TAGCTGGTTGCAATGAAGGGACCACCAGCTGTCCGGCCAAAATTGGTTCCTCCATGGTAC 2326
consensus_10045#1 CCACTGGC--CGATGCGGCACCCCACCTCCGAACGATGTAAACCAGCCGGTCCAGGCCTC 1918
**** * *** * ** * * * ** *** * **** * *
consensus_10045#0 TGCACCAGAACATGAAATGCGGTCAGAACAAGTAAAACTACATTCACTGCAACA-CCAGT 2385
consensus_10045#1 AGTCCACATGGACGGCTTGTAATTCTTGTTTGGGCTGAAGTAGTCGCAGTAAAATCCATT 1978
* * * * ** * * * ** * * ** * *** *
consensus_10045#0 GTTGGTGT-GACCAGTGAGCCCCCTCTCTTCTCACCATGTAATAGTTCACGAAAGAGCCA 2444
consensus_10045#1 GCAAGTGTTGATCACTGGGTCAGGGGCGTCG----------------------------- 2009
* **** ** ** ** * * *
consensus_10045#0 CCCTTCTGTATGAACCTCGCCACGGCAAAAGCCAGATCCTCCACTGGCCGATGCGGCACC 2504
consensus_10045#1 ------------------------------------------------------------
consensus_10045#0 CCACCTCCGAACGATGTAAACCTTCACGCGCAGTAAAATGTAAAACCG 2552
consensus_10045#1 ------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||