cluster # 10317

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Oryza sativa
cluster # 10317 cluster # 10317 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10317#0 length = 1556 sequences # 7
consensusID : consensus_10317#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1556
fasta sequence
                              [TCCCCGGCCCACGCCCGCCGCGCGGCCCACCTCCGCCTTTATGACCGATTCCCCATCCCCTCCTCTCTCCTCCACCACCAAACCCTAGCTCCCACCGCCGCCGACGATGTCGTCCTCCTCCTCCCCGCCGCCCAACCCGGACGCGCTCTCCTCCCCGGACCTCCCCCCGCTGGCCGCCCCCGCGGCGGCGGCCGCGGCAGCCGCCGCCGCGGTGTCATCTGGTGGCGCGGGGGGCTCCGGGCGGAGGCTGCCCCCGCCGTGCTGGACGCACGAGGAGACGCTGGCGCTCATCGAGGCCTACCGCGATAGGTGGGAGGGGCTCCGCAAGGGGAACCTCAGAGCCTCCGACTGGGACGACGTCGCCGGCGCCGTCACCGCCCGCTGCGGGAGGTTCCCCACGGCGACGCACAAGTCCGGCGTCCAGTGCCGCCACAAGATCGAGAAGCTCCGGAAGCGGTACCGCGCCGAGAGGGCGCGCGCCGCCGGCCGCTCCAAGGGCCCCAAGTGGCCCTTCTTCCCGCTCCTCCACGACCTCGCCGGCGGCGGGGCGCCCGACCCTAGCCCCAACCACATCATCAAGATCAAATCCAAGGGCCCCGCCGCCGCGGCCGCCTCCCCCTCACCGGCGTCCCCTTCTCCCGTCTCCTCCCCTTCCTCCGAGGAGGATGAGGAGGAGGAGGCGGCGGCGGACGCGGGGCGGAGCAGGAGCCTTCACGGCCTCATCTCCAACGGCGGGAGCGGGAGCGGCCTGCGCTTCACCATCCCCAAGGCCTCCCGCTCCAAGCCTGTGGCGCAGCGAGAACAACCCACCGCCATCAAGGTGGAGAAGAGCGAGGAGGACGCCGAGGCGGAGGCCATGGCCGAGGTGGCCTCGGCGCTGCGCGCCGTCGGCGACAAGTTCCTCCGCATGGAGGAGCGGAGGCTGGAGATCTCTCTCCAGATAGAGAAGGA-GCGGATGGAGTCTGAGATGAAGCGCACCCAGACGCTGCTCGACGCCCAGCAGCTGTTCGTCGAGGCCTTCCTCGGCAAGCAGCAGCACCACCACCACCACCACAAGAAGGCCAAGGTGATCTCCGCCGCCGCTGCCGCAGCAACAGCCGCCATGGATGAGGATTGATCTACTCCATGTTGTTGGTATGGCCTACTATGTGTTTAGTAATGTTTACTTCTCATTGTTAACTGCTGGT-------GTTGACTTGTGATAATTCTACTAGCTGTTGTTTGTGTTTGGGAGGGTGATTAAAGTAGTCAGGTGTAGGATATGGAGTGGGGGAGTGAGGAGGAGGATTAGGAGTGAGTGCTCAGTTAAGCTGCCTGTAATCAGTTCAGTGATCTTGTGCTTGAGTTGCTGCTGCTGAAGCTGCCTTGTCCAAATACTTCTGTAGTAGCATATTATTGTCAGGTTTTTACTCAATCAGTGTCCTGTGTCATGTTCTATGTTTTGATGATCCTAAGCCTTGGAGTATGTGACAGTAACTTGAAGAAGCCTTGCACTGTAGTAACATGTTTTTCTAGGTGAATCAAATTAATGGCTGGTTTAGGGGTAAAACAAAAAAGGA]

[+] EMBL AK072487             [TCCCCGGCCCACGCCCGCCGCGCGGCCCACCTCCGCCTTTATGACCGATTCCCCATCCCCTCCTCTCTCCTCCACCACCAAACCCTAGCTCCCACCGCCGCCGACGATGTCGTCCTCCTCCTCCCCGCCGCCCAACCCGGACGCGCTCTCCTCCCCGGACCTCCCCCCGCTGGCCGCCCCCGCGGCGGCGGCCGCGGCAGCCGCCGCCGCGGTGTCATCTGGTGGCGCGGGGGGCTCCGGGCGGAGGCTGCCCCCGCCGTGCTGGACGCACGAGGAGACGCTGGCGCTCATCGAGGCCTACCGCGATAGGTGGGAGGGGCTCCGCAAGGGGAACCTCAGAGCCTCCGACTGGGACGACGTCGCCGGCGCCGTCACCGCCCGCTGCGGGAGGTTCCCCACGGCGACGCACAAGTCCGGCGTCCAGTGCCGCCACAAGATCGAGAAGCTCCGGAAGCGGTACCGCGCCGAGAGGGCGCGCGCCGCCGGCCGCTCCAAGGGCCCCAAGTGGCCCTTCTTCCCGCTCCTCCACGACCTCGCCGGCGGCGGGGCGCCCGACCCTAGCCCCAACCACATCATCAAGATCAAATCCAAGGGCCCCGCCGCCGCGGCCGCCTCCCCCTCACCGGCGTCCCCTTCTCCCGTCTCCTCCCCTTCCTCCGAGGAGGATGAGGAGGAGGAGGCGGCGGCGGACGCGGGGCGGAGCAGGAGCCTTCACGGCCTCATCTCCAACGGCGGGAGCGGGAGCGGCCTGCGCTTCACCATCCCCAAGGCCTCCCGCTCCAAGCCTGTGGCGCAGCGAGAACAACCCACCGCCATCAAGGTGGAGAAGAGCGAGGAGGACGCCGAGGCGGAGGCCATGGCCGAGGTGGCCTCGGCGCTGCGCGCCGTCGGCGACAAGTTCCTCCGCATGGAGGAGCGGAGGCTGGAGATCTCTCTCCAGATAGAGAAGGA GCGGATGGAGTCTGAGATGAAGCGCACCCAGACGCTGCTCGACGCCCAGCAGCTGTTCGTCGAGGCCTTCCTCGGCAAGCAGCAGCACCACCACCACCACCACAAGAAGGCCAAGGTGATCTCCGCCGCCGCTGCCGCAGCAACAGCCGCCATGGATGAGGATTGATCTACTCCATGTTGTTGGTATGGCCTACTATGTGTTTAGTAATGTTTACTTCTCATTGTTAACTGCTGGT       GTTGACTTGTGATAATTCTACTAGCTGTTGTTTGTGTTTGGGAGGGTGATTAAAGTAGTCAGGTGTAGGATATGGAGTGGGGGAGTGAGGAGGAGGATTAGGAGTGAGTGCTCAGTTAAGCTGCCTGTAATCAGTTCAGTGATCTTGTGCTTGAGTTGCTGCTGCTGAAGCTGCCTTGTCCAAATACTTCTGTAGTAGCATATTATTGTCAG                                                                                                                                                             ]
[+] EMBL CB680558             [                                                                                                              CGTCCTCCTCCTCCCCGCCGCCCAACCCGGACGCGCTCTCCTCCCCGGACCTCCCCCCGCTGGCCGCCCCCGCGGCGGCGGCCGCGGCAGCCGCCGCCGCGGTGTCATCTGGTGGCGCGGGGGGCTCCGGGCGGAGGCTGCCCCCGCCGTGCTGGACGCACGAGGAGACGCTGGCGCTCATCGAGGCCTACCGCGATAGGTGGGAGGGGCTCCGCAAGGGGAACCTCAGAGCCTCCGACTGGGACGACGTCGCCGGCGCCGTCACCGCCCGCTGCGGGAGGTTCCCCACGGCGACGCACAAGTCCGGCGTCCAGTGCCGCCACAAGATCGAGAAGCTCCGGAAGCGGTACCGCGCCGAGAGGGCGCGCGCCGCCGGCCGCTCCAAGGGCCCCATGGGGCCCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB653037             [                                                                                                                                                                                                                                                                                                                                                  GAGCCTCCGACTGGGACGACGTCGCCGGCGCCGTCACCGCCCGCTGCGGGAGGTTCCCCACGGCGACGCACAAGTCCGGCGTCCAGTGCCGCCACAAGATCGAGAAGCTCCGGAAGCGGTACCGCGCCGAGAGGGCGCGCGCCGCCGGCCGCTCCAAGGGCCCCAAGTGGCCCTTCTTCCCGCTCCTCCACGACCTCGCCGGCGGCGGGGCGCCCGACCCTAGCCCCAACCCCATCATCAAGATCAAATCCAAGGGCCCCGCCGCCGCGGCCGCCTCCCCCTCACCGGCGTCCCCTTCTCCCGTCTCCTCCCCTTCCTCCGAGGAGGATGAGGAGGAGGAGGCGGCGGCGGACGCGGGGCGGAGCAGGAGCCTTCACGGCCTCATCTCCAACGGCGGGAGCGGGAGCGGCCTGCGCTTCACCATCCCCAAGGCCTCCCGCTCCAAGCCTGTGGCGCAGCGAGAACAACCCACCGCCATCAAGGTGGAGAAGAGCGAGGAGGACGCCGAGGCGGAGGCCATGGCCGAGGTGGCCTCGGCGCTGCGCGCCGTCGGCGACAAGTTCCTCCACATGGAGGAGCGGAGGCTGGAGATCTCTCTCCAGATAGAGAAGGA GCGGATGGAGTCTGAGATGAAGCGCACCCAGACGCTGCTCGACGCCCAGCANCTGTTCGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB663619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGAGGAGGAGGCGGCGGCGGACGCGGGGCGGAGCAGGAGCCTTCACGGCCTCATCTCCAACGGCGGGAGCGGGAGCGGCCTGCGCTTCACCATCCCCAAGGCCTCCCGCTCCAAGCCTGTGGCGCAGCGAGAACAACCCACCGCCATCAAGGTGGAGAAGAGCGAGGAGGACGCCGAGGCGGAGGCCATGGCCGAGGTGGCCTCGGCGCTGCGCGCCGTCGGCGACAAGTTCCTCCGCATGGAGGAGCGGAGGCTGGAGATCTCTCTCCAGATAGAGAAGGA GCGGATGGAGTCTGAGATGAAGCGCACCCAGACGCTGCTCGACGCCCAGCAGCTGTTCGTCGAGGCCTTCCTCGGCAAGCAGCAGCACCACCACCACCACCACAAGAAGGCCAAGGTGATCTCCGCCGCCGCTGCCGCAGCAACAGCCGCCATGGATGAGGATTGATCTACTCCATGTTGTTGGTATGGCCTACTATGTGTTTAGTAATGTTTACTTCTCATTGTTAACTGCTGGT       GTTGACTTGTGATAATTCTACTAGCTGTTGTTTGTGTTTGGGAGGGTGATTAAAGTAGTCAGGTGTAGGATATGGAGTGGGGGAGTGAGGAGGAGGATTAGGAGTGAGTGCTCAGTTAAGCTGCCTGTAATCAGTTCAGTGATCTTGTGCTTGAGTTGCTGCTGCTGAAGCTGCCTTGTCCAAATACTTCTGTAGTAGCATATTATTGTCAGG                                                                                                                                                            ]
[-] EMBL CB680559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGGAGAAGAGCGAGGAGGACGCCGAGGCGGAGGCCATGGCCGAGGTGGCCTCGGCGCTGCGCGCCGTCGGCGACAAGTTCCTCCGCATGGAGGAGCGGAGGCTGGAGATCTCTCTCCAGATAGAGAAGGA GCGGATGGAGTCTGAGATGAAGCGCACCCAGACGCTGCTCGACGCCCAGCAGCTGTTCGTCGAGGCCTTCCTCGGCAAGCAGCAGCACCACCACCACCACCACAAGAAGGCCAAGGTGATCTCCGCCGCCGCTGCCGCAGCAACAGCCGCCATGGATGAGGATTGATCTACTCCATGTTGTTGGTATGGCCTACTATGTGTTTAGTAATGTTTACTTCTCATTGTTAACTGCTGGT       GTTGACTTGTGATAATTCTACTAGCTGTTGTTTGTGTTTGGGAGGGTGATTAAAGTAGTCAGGTGTAGGATATGGAGTGGGGGAGTGAGGAGGAGGATTAGGAGTGAGTGCTCAGTTAAGCTGCCTGTAATCAGTTCAGTGATCTTGTGCTTGAGTTGCTGCTGCTGAAGCTGCCTTGTCCAAATACTTCTGTAGTAGCATATTATTGTCAGGTTTTTACTCAATCAGTGTCCTGTGTCATGTTCTATGTTTTGATGATCCTAAGCCTTGGAGTATGTGACAGTAACTTGAAGAAGCCTTGCACTGTAGTAACATGTTTTTCTAGGTGAATCAAATTAATGGCTGGTTTAGGGGTAAAACAAAAAAGGA]
[-] EMBL CA759190             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAGACA AGGGGGACGCGGATGGAGTCTTAGATTAAGCGCACCCAGACGTTGCTTGACGCCCAGGAGCTTTTCGTCGAGGCCTTTCTTGGCAAGCAGCAGCAGCCCCCCCACCCCCACAAGAAGGCCAAGGTGATTTCCGCCGCCGCTGCCGCAGCAACAGCCGCCATGGATGAGGATTGATTTACTCCATGTTGTTGGTATGGCCTACTATGTGTTTAGTAATGTTTACTTCTCATTGTTAACTGCTGGTGTTAGTCGTTGACTTGTGATAATTTTACTAGCTGTTGTTTGTGTTTGGGAGGGTGATTAAAGTAGTCAGGTGTTGGATATGGAGTGGGGGAGTGAGGAGGAGGATTAGGAGTGAGTGCTCAGTTAAACTGCCTGTAATCAGTTCAGTGATTTTGTGCCTGAGTTGCTGCTGCTGAAACTGCCTTGTCCAAATACTTCTGTAGTAGCATATTATTGTCAGGTTTTTACTCAGTCAGTGTCCTGTGTCATGTTCTATGTTTCGATGATCCTAAGCCTTGGAGTATGTGACAGTAACTTGAAAAAaaaaaaaa                                                                  ]
[-] EMBL BE530953             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGCCGCCATGGATGAGGATTGATCTACTCCATGTTGTTGGTATGGCCTACTATGTGTTTAGTAATGTTTACTTCTCATTGTTAACTGCTGGTGTTAGTCGTTGACTTGTGATAATTCTACTAGCTGTTGTTTGTGTTTGGGAGGGTGATTAAAGTAGTCAGGTGTAGGATATGGAGTGGGGGAGTGAGGAGGAGGATTAGGAGTGAGTGCTCAGTTAAGCTGCCTGTAATCAGTTCAGTGATCTTGTGCTTGAGTTGCTGCTGCTGAAGCTGCCTTGTCCAAATACTTCTGTAGTAGCATATTATTGTCctcgt                                                                                                                                                          ]




>consensus_10317#0
TCCCCGGCCCACGCCCGCCGCGCGGCCCACCTCCGCCTTTATGACCGATTCCCCATCCCC
TCCTCTCTCCTCCACCACCAAACCCTAGCTCCCACCGCCGCCGACGATGTCGTCCTCCTC
CTCCCCGCCGCCCAACCCGGACGCGCTCTCCTCCCCGGACCTCCCCCCGCTGGCCGCCCC
CGCGGCGGCGGCCGCGGCAGCCGCCGCCGCGGTGTCATCTGGTGGCGCGGGGGGCTCCGG
GCGGAGGCTGCCCCCGCCGTGCTGGACGCACGAGGAGACGCTGGCGCTCATCGAGGCCTA
CCGCGATAGGTGGGAGGGGCTCCGCAAGGGGAACCTCAGAGCCTCCGACTGGGACGACGT
CGCCGGCGCCGTCACCGCCCGCTGCGGGAGGTTCCCCACGGCGACGCACAAGTCCGGCGT
CCAGTGCCGCCACAAGATCGAGAAGCTCCGGAAGCGGTACCGCGCCGAGAGGGCGCGCGC
CGCCGGCCGCTCCAAGGGCCCCAAGTGGCCCTTCTTCCCGCTCCTCCACGACCTCGCCGG
CGGCGGGGCGCCCGACCCTAGCCCCAACCACATCATCAAGATCAAATCCAAGGGCCCCGC
CGCCGCGGCCGCCTCCCCCTCACCGGCGTCCCCTTCTCCCGTCTCCTCCCCTTCCTCCGA
GGAGGATGAGGAGGAGGAGGCGGCGGCGGACGCGGGGCGGAGCAGGAGCCTTCACGGCCT
CATCTCCAACGGCGGGAGCGGGAGCGGCCTGCGCTTCACCATCCCCAAGGCCTCCCGCTC
CAAGCCTGTGGCGCAGCGAGAACAACCCACCGCCATCAAGGTGGAGAAGAGCGAGGAGGA
CGCCGAGGCGGAGGCCATGGCCGAGGTGGCCTCGGCGCTGCGCGCCGTCGGCGACAAGTT
CCTCCGCATGGAGGAGCGGAGGCTGGAGATCTCTCTCCAGATAGAGAAGGAGCGGATGGA
GTCTGAGATGAAGCGCACCCAGACGCTGCTCGACGCCCAGCAGCTGTTCGTCGAGGCCTT
CCTCGGCAAGCAGCAGCACCACCACCACCACCACAAGAAGGCCAAGGTGATCTCCGCCGC
CGCTGCCGCAGCAACAGCCGCCATGGATGAGGATTGATCTACTCCATGTTGTTGGTATGG
CCTACTATGTGTTTAGTAATGTTTACTTCTCATTGTTAACTGCTGGTGTTGACTTGTGAT
AATTCTACTAGCTGTTGTTTGTGTTTGGGAGGGTGATTAAAGTAGTCAGGTGTAGGATAT
GGAGTGGGGGAGTGAGGAGGAGGATTAGGAGTGAGTGCTCAGTTAAGCTGCCTGTAATCA
GTTCAGTGATCTTGTGCTTGAGTTGCTGCTGCTGAAGCTGCCTTGTCCAAATACTTCTGT
AGTAGCATATTATTGTCAGGTTTTTACTCAATCAGTGTCCTGTGTCATGTTCTATGTTTT
GATGATCCTAAGCCTTGGAGTATGTGACAGTAACTTGAAGAAGCCTTGCACTGTAGTAAC
ATGTTTTTCTAGGTGAATCAAATTAATGGCTGGTTTAGGGGTAAAACAAAAAAGGA
clustalw multiple alignements is not computed in this case