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Oryza sativa
cluster # 10321 cluster # 10321       Sequences # 7       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10321#0 length = 2634 sequences # 5  
 consensus_10321#1 length = 702 sequences # 1  
consensus_10321#2 length = 193 sequences # 1  
consensusID : consensus_10321#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2634
fasta sequence 
                              [TCCACCCTCCGCCCGGGAAATCCTTTTTAATATATTTCGAGAATTTTTTTGGTTCTCGGGCTCGCCGCGGACGCGATCCCACTCCTCCTCTCCTCGCCGGCCTGGCCTCCCGCTGCTCCCGGCGATTCTCCCGGAAACTTTTTTTTTTCGCTCGACGCGGTGAAGTGAAGTGAATTGCCGGTGCTATCCGGGGAGGGAGAGAAAGAGAGAGAAGTGAACTCAGGAAATAAGCAGCTCTATTTTCAAGGAAATTGTTTGAGGCATGACTAGGACTTAAGCACACAATGCAGATCATGAAGATTGATGATGGAAGGCCTTACCATAGTAATGTTTTTCATGAGCTTGTATCCAATGGCGGCCCTAAAGTAGATGGAGAAATTGAAAGAGAAACTAAACAACATATTTTGCTTGATACAATGGTACAACAAACCAATCCATCAGAATATAGTTTTATGAAGGCCGGGCAACAAAATGTAGATAAAGCCATCCAGATACGGCCTGAGGATGTTTCTTATGACAAGGATGTTGTGGAAATCAAATTGCCAGATATAATGGTCTCTTCTAATTATGGCGTTCAGTTTGTTAAGGATGTCTGCATTGATGAGGGAGTACTTGCTGATCAGAAGGCTATAGCAGAAAAGGTGTCACTGAACCTGAATTCTTCAAAGGGAGATACAAATGGTATTCGGATAAAAGAAACAGCAGATGAACCTGCAAAATCTGTTAATGATTTAAAATCGCAAATAGTTGTCCTGCCCGAAGCATGTGTTACTGATGGGGATACTGTGGAACAAAATCATCCTTGCAAATTGCATGATCTCGAAGGCAACAGTAGTGTAGATGGATTGACTGTTGTAAATGTTGAGAAATCGACGCCCAAACAATTAGTAAGTAATGACAATGCAGAATATTGCCAACAAATGGGTGCAGATGTTTCTGAGAGCAGTGAAAATCATGGGCCAAATCTCAATGGAGAACCAGTTGATCAGGTTCCATCAAATGATTCCCATGAAACTGGAGCTAGTATTGCATCTGCGATCACTAACGTCAATGGTTTATCAGTTGAGTCAACTGCTGATGGCCACTCTGGGGTGGTGACTGAAGATGGTGTTTCTGGTGTGGCACTAAATAAGACAGAAATCAACCAAATTAATCACTATAATCCCTTCATCGCATATGGATCATTAGAGGACACGTGGGAACCCAAGTACTCCCTACCTACAATTGTTGATGATGTTTATTCAGTGCCCTGTCCTGTCGAAAAGACAGACAGTTTTAGTGATATCGTCTATGGTGCACTGCGAGGATTTAATTTTCTTGAAACTGGTGAATCCATTGCAGAAGACAGTACATTAGATTCTGTTGTAGAAAATTCAAGTATGACTGATGTCCAAGCATCTGAAGAAAAAGATGAAGCAAGAAGTGATGACATTTTGAGTGATGAGAGAAAAATTCCTGTTGATCAGAGAAGTCCTGTTGAAAATTCAGACAGTTTGAGTGATCCTGTTGACAGGGCACTTAGTTCTACTGAAACAGATGGAGCGAGAAATGAAGACAGTAGATTAGACTCTACTGAAGCAAGTCCAAGTAGGTCGTATGTCCAACCTTCGGAAGATAGAAATGATCAGGTGGATAATTTCGTTTATGGAATTAGAACTGATGCAGCACATGGGACGAGTTCAGGTACATCTCCGTTAACTGGTAAGACAGAGCCTATTGATGCGAAAAGTGAGAATGATCCAAAATGCGAGATCGATAGTGTCCAAGACGGACATGATTTCAACCCAAGAGAAGCAAACGATGGCACAAATATAAGTGAGGACAACAAAGATAGTAAGAGTTCCACACGGCAAACAGGACCAGTAACTGAACAAAATGAACCTGACAGTGCAAAGATGACAATGCAAACAGAACCTGTAGCTCAACGGAATGAACCTGACAGTGCAAAAGTGACCATGCAAACAGAATCTGTAGCTCAACCAAATGAAGCTGACAGTGCAAAAGTAACAGCTCGAAATGTTATCCGCAATCCCTTTGAGTCAAGTTTTTCTGGACCTAGCATTATATCAGGTCCACTAACACCATCAGGTCATATACCTTATTCTGGAAACATTTCTCTTCGATCGGATAGCAGCACAACAAGTACTCGGTCCTTCGCATTTCCAGTGCTACAGACAG-AGTGGAACAGCAGCCCTGTGAAGATGGCGAAAGCGGACCGCAGGCGCTTGAGACGGGACCGAGGTTGGGGTTATAGAATCCTCTGCTGTAAATTCTGAATCTGCATGCTCCCGCATATCTTTTCTTTTTGAGATCAGCTCTTCGCGTCGCGCCCCTGAGCTCGTCGTGGTAGCCGTGTTAAATTCATTCAAAATGTTGCTCATTTCTCCCCTTTCCCCACCACCCCTCCTCTTGCTGCCCCCCTCCCTCCATGTCCTGCTCTCTCTTTTTTTTACTCATCTATAGCAGGTTAATGGCTTGTCTGGATTCGGTAGTGGCTTGTAATTTGCATTGAGAGTGAGAAATGAAGGTATACTTGGTGAAAAGTATTGTAGCTGATGAGCATCCCTGGAGACTGTAAAACTGAAACTGGACTGTGTTACCCTGTTCAGAAGAANACAAAAAAAAAAAAAAAAA]

[+] EMBL AK072142             [TCCACCCTCCGCCCGGGAAATCCTTTTTAATATATTTCGAGAATTTTTTTGGTTCTCGGGCTCGCCGCGGACGCGATCCCACTCCTCCTCTCCTCGCCGGCCTGGCCTCCCGCTGCTCCCGGCGATTCTCCCGGAAACTTTTTTTTTTCGCTCGACGCGGTGAAGTGAAGTGAATTGCCGGTGCTATCCGGGGAGGGAGAGAAAGAGAGAGAAGTGAACTCAGGAAATAAGCAGCTCTATTTTCAAGGAAATTGTTTGAGGCATGACTAGGACTTAAGCACACAATGCAGATCATGAAGATTGATGATGGAAGGCCTTACCATAGTAATGTTTTTCATGAGCTTGTATCCAATGGCGGCCCTAAAGTAGATGGAGAAATTGAAAGAGAAACTAAACAACATATTTTGCTTGATACAATGGTACAACAAACCAATCCATCAGAATATAGTTTTATGAAGGCCGGGCAACAAAATGTAGATAAAGCCATCCAGATACGGCCTGAGGATGTTTCTTATGACAAGGATGTTGTGGAAATCAAATTGCCAGATATAATGGTCTCTTCTAATTATGGCGTTCAGTTTGTTAAGGATGTCTGCATTGATGAGGGAGTACTTGCTGATCAGAAGGCTATAGCAGAAAAGGTGTCACTGAACCTGAATTCTTCAAAGGGAGATACAAATGGTATTCGGATAAAAGAAACAGCAGATGAACCTGCAAAATCTGTTAATGATTTAAAATCGCAAATAGTTGTCCTGCCCGAAGCATGTGTTACTGATGGGGATACTGTGGAACAAAATCATCCTTGCAAATTGCATGATCTCGAAGGCAACAGTAGTGTAGATGGATTGACTGTTGTAAATGTTGAGAAATCGACGCCCAAACAATTAGTAAGTAATGACAATGCAGAATATTGCCAACAAATGGGTGCAGATGTTTCTGAGAGCAGTGAAAATCATGGGCCAAATCTCAATGGAGAACCAGTTGATCAGGTTCCATCAAATGATTCCCATGAAACTGGAGCTAGTATTGCATCTGCGATCACTAACGTCAATGGTTTATCAGTTGAGTCAACTGCTGATGGCCACTCTGGGGTGGTGACTGAAGATGGTGTTTCTGGTGTGGCACTAAATAAGACAGAAATCAACCAAATTAATCACTATAATCCCTTCATCGCATATGGATCATTAGAGGACACGTGGGAACCCAAGTACTCCCTACCTACAATTGTTGATGATGTTTATTCAGTGCCCTGTCCTGTCGAAAAGACAGACAGTTTTAGTGATATCGTCTATGGTGCACTGCGAGGATTTAATTTTCTTGAAACTGGTGAATCCATTGCAGAAGACAGTACATTAGATTCTGTTGTAGAAAATTCAAGTATGACTGATGTCCAAGCATCTGAAGAAAAAGATGAAGCAAGAAGTGATGACATTTTGAGTGATGAGAGAAAAATTCCTGTTGATCAGAGAAGTCCTGTTGAAAATTCAGACAGTTTGAGTGATCCTGTTGACAGGGCACTTAGTTCTACTGAAACAGATGGAGCGAGAAATGAAGACAGTAGATTAGACTCTACTGAAGCAAGTCCAAGTAGGTCGTATGTCCAACCTTCGGAAGATAGAAATGATCAGGTGGATAATTTCGTTTATGGAATTAGAACTGATGCAGCACATGGGACGAGTTCAGGTACATCTCCGTTAACTGGTAAGACAGAGCCTATTGATGCGAAAAGTGAGAATGATCCAAAATGCGAGATCGATAGTGTCCAAGACGGACATGATTTCAACCCAAGAGAAGCAAACGATGGCACAAATATAAGTGAGGACAACAAAGATAGTAAGAGTTCCACACGGCAAACAGGACCAGTAACTGAACAAAATGAACCTGACAGTGCAAAGATGACAATGCAAACAGAACCTGTAGCTCAACGGAATGAACCTGACAGTGCAAAAGTGACCATGCAAACAGAATCTGTAGCTCAACCAAATGAAGCTGACAGTGCAAAAGTAACAGCTCGAAATGTTATCCGCAATCCCTTTGAGTCAAGTTTTTCTGGACCTAGCATTATATCAGGTCCACTAACACCATCAGGTCATATACCTTATTCTGGAAACATTTCTCTTCGATCGGATAGCAGCACAACAAGTACTCGGTCCTTCGCATTTCCAGTGCTACAGACAG AGTGGAACAGCAGCCCTGTGAAGATGGCGAAAGCGGACCGCAGGCGCTTGAGACGGGACCGAGGTTGGGGTTATAGAATCCTCTGCTGTAAATTCTGAATCTGCATGCTCCCGCATATCTTTTCTTTTTGAGATCAGCTCTTCGCGTCGCGCCCCTGAGCTCGTCGTGGTAGCCGTGTTAAATTCATTCAAAATGTTGCTCATTTCTCCCCTTTCCCCACCACCCCTCCTCTTGCTGCCCCCCTCCCTCCATGTCCTGCTCTCTCTTTTTTTTACTCATCTATAGCAGGTTAATGGCTTGTCTGGATTCGGTAGTGGCTTGTAATTTGCATTGAGAGTGAGAAATGAAGGTATACTTGGTGAAAAGTATTGTAGCTGATGAGCATCCCTGGAGACTGTAAAACTGAAACTGGACTGTGTTACCCTGTTCAGAAGAACACAAAt             ]
[+] EMBL CB682169             [                                                                                                                                                                                                                                                                                                                                                                                                                                           tACCATTCCATCAGAATATACTTTTATGAAGGCCGGGCAACAAAATGCAGATAAAGCCATCCAGATACGGCCTGAGGATGTTTCTTATGACAAGGATGTTGTGGAAATCAAATTGCCATATATAATGGTCTCTTCTAATTATGGCGACCAGTTTGTTAAGGATGTCTGCATTGATGAGGGAGTACTTGCTGATCAGAAGGCTATAGCAGAAAAGGTGTCACTGAACCTGAATTCTTCAAAGGGAGATACCAATGGTATTCGGATATCAGAAACAGCAGATGAACCTGCCAAATCTGTTAATGATTTAAAATCGCAAATAGTTGTCCTGCCCGAAGCATGTGTTACTGATGGGGATACTGTGGAACAAAATCATCCTTGCAAATTGCATGATCTCGAAGGCAACAGTAGAGTAGATGGATTGACTGATGTAAATGTTGAGAAATCGACGCCCAAACAATTAGTAAGTAATGACAATGCACAATATTGCCAACAAATGGGTGCAGATGTTTCTGAGAGCAGTGAAAATCATGGGCCAAATCTCAATGGAGAACCAGTTGATCAGGCTCCATCAAATGATTCCCATGAAACTGGAGCTAGTATTGCATCTGCGATCACTAACGTCCATGGTTTATCAGTTGAATCAACTGCTGATGGCCACTCTGGGGTGGTGACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BI804399             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATCA GTCCACTAACACCATCAGGTCATATACCTTATTCTGGAAACATTTCTCTTCGATCGGATA CAGCACAACAAGTACTCGGTCCTTCGCATTTCCAGTGCTACAGACAG AGTGGAACAGCAGCCCTGTGAAGATGGCGAAAGCGGACCGCAGGCGCTTGAGACGGGACCGAGGTTGGGGTTATAGAATCCTCTGCTGTAAATTCTGAATCTGCATGCTCCCGCATATCTTTTCTTTTTGAGATCAGCTCTTCGCGTCGCGCCCCTGAGCTCGTCGTGGTACCCGTGTTAAATTCATTC AAATGTTGCTCATTTCTCCCCTTTCCCCACCACCCCTCCTCTTGCTGCCCCCCTCCCTCCATGTCCTG  CTCTCTTTTTTTTACTCATCTATA CAGGTTAATGGCTTGTCTGGATTCGGTAGTGGCTTGTAATTT CTTTGAGAGTGAGAAATGAAGGTATACTTGGTGAAAAaaaaa                                                                                      ]
[+] EMBL AU033025             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACAGTAGTGGAACAGCAGCCCTGTGANGATGGCGAAAGCGGNCCGCAGGCGCTTGAGACGGGACCGAGGTTGGNGTTATNGAATCCTCTGCTGTAAATTCTGAATCTGCATGCTCCCGCATATCTTTTCTTTTTGAGATCAGCTCTTCGCGTCGCGCCCCTGAGCTCGTCGTGGTAGCCGTGTTAAATTCATTCAAAATGTTGCTCATTTCTCCCCTTTCCCCACCACCCCTCCTCTTGCTGCCCCCCTCCCTCCATGTCCTGCTCTCTCTTTTTTTTACTCATCTATAGCNGGTTAATGGCTTGTCTGGATTCGGTNGTGGCTTGTNATTTGCATTGAGTGTGAGAAATGANGGTATACTTGGTGAAAAGTATTGTAGCTNATGAGCATCCCTGGNNACTGTAAAACTGAAACTGNACTGTGTTACCCTGTTCNGNTGNANACAANAA            ]
[+] EMBL AU164280             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTCCCTCCATGTCCTGCTCTCTCTTTTTTTTACTCATCTATAGCAGGTTAATGGCTTGTCTGGATTCGGTAGTGGCTTGTAATTTGCATTGAGAGTGAGAAATGAAGGTATACTTGGTGAAAAGTATTGTAGCTGATGAGCATCCCTGGAGACTGTAAAACTGAAACTGGACTGTGTTACCCTGTTCAGAAGAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10321#0
TCCACCCTCCGCCCGGGAAATCCTTTTTAATATATTTCGAGAATTTTTTTGGTTCTCGGG
CTCGCCGCGGACGCGATCCCACTCCTCCTCTCCTCGCCGGCCTGGCCTCCCGCTGCTCCC
GGCGATTCTCCCGGAAACTTTTTTTTTTCGCTCGACGCGGTGAAGTGAAGTGAATTGCCG
GTGCTATCCGGGGAGGGAGAGAAAGAGAGAGAAGTGAACTCAGGAAATAAGCAGCTCTAT
TTTCAAGGAAATTGTTTGAGGCATGACTAGGACTTAAGCACACAATGCAGATCATGAAGA
TTGATGATGGAAGGCCTTACCATAGTAATGTTTTTCATGAGCTTGTATCCAATGGCGGCC
CTAAAGTAGATGGAGAAATTGAAAGAGAAACTAAACAACATATTTTGCTTGATACAATGG
TACAACAAACCAATCCATCAGAATATAGTTTTATGAAGGCCGGGCAACAAAATGTAGATA
AAGCCATCCAGATACGGCCTGAGGATGTTTCTTATGACAAGGATGTTGTGGAAATCAAAT
TGCCAGATATAATGGTCTCTTCTAATTATGGCGTTCAGTTTGTTAAGGATGTCTGCATTG
ATGAGGGAGTACTTGCTGATCAGAAGGCTATAGCAGAAAAGGTGTCACTGAACCTGAATT
CTTCAAAGGGAGATACAAATGGTATTCGGATAAAAGAAACAGCAGATGAACCTGCAAAAT
CTGTTAATGATTTAAAATCGCAAATAGTTGTCCTGCCCGAAGCATGTGTTACTGATGGGG
ATACTGTGGAACAAAATCATCCTTGCAAATTGCATGATCTCGAAGGCAACAGTAGTGTAG
ATGGATTGACTGTTGTAAATGTTGAGAAATCGACGCCCAAACAATTAGTAAGTAATGACA
ATGCAGAATATTGCCAACAAATGGGTGCAGATGTTTCTGAGAGCAGTGAAAATCATGGGC
CAAATCTCAATGGAGAACCAGTTGATCAGGTTCCATCAAATGATTCCCATGAAACTGGAG
CTAGTATTGCATCTGCGATCACTAACGTCAATGGTTTATCAGTTGAGTCAACTGCTGATG
GCCACTCTGGGGTGGTGACTGAAGATGGTGTTTCTGGTGTGGCACTAAATAAGACAGAAA
TCAACCAAATTAATCACTATAATCCCTTCATCGCATATGGATCATTAGAGGACACGTGGG
AACCCAAGTACTCCCTACCTACAATTGTTGATGATGTTTATTCAGTGCCCTGTCCTGTCG
AAAAGACAGACAGTTTTAGTGATATCGTCTATGGTGCACTGCGAGGATTTAATTTTCTTG
AAACTGGTGAATCCATTGCAGAAGACAGTACATTAGATTCTGTTGTAGAAAATTCAAGTA
TGACTGATGTCCAAGCATCTGAAGAAAAAGATGAAGCAAGAAGTGATGACATTTTGAGTG
ATGAGAGAAAAATTCCTGTTGATCAGAGAAGTCCTGTTGAAAATTCAGACAGTTTGAGTG
ATCCTGTTGACAGGGCACTTAGTTCTACTGAAACAGATGGAGCGAGAAATGAAGACAGTA
GATTAGACTCTACTGAAGCAAGTCCAAGTAGGTCGTATGTCCAACCTTCGGAAGATAGAA
ATGATCAGGTGGATAATTTCGTTTATGGAATTAGAACTGATGCAGCACATGGGACGAGTT
CAGGTACATCTCCGTTAACTGGTAAGACAGAGCCTATTGATGCGAAAAGTGAGAATGATC
CAAAATGCGAGATCGATAGTGTCCAAGACGGACATGATTTCAACCCAAGAGAAGCAAACG
ATGGCACAAATATAAGTGAGGACAACAAAGATAGTAAGAGTTCCACACGGCAAACAGGAC
CAGTAACTGAACAAAATGAACCTGACAGTGCAAAGATGACAATGCAAACAGAACCTGTAG
CTCAACGGAATGAACCTGACAGTGCAAAAGTGACCATGCAAACAGAATCTGTAGCTCAAC
CAAATGAAGCTGACAGTGCAAAAGTAACAGCTCGAAATGTTATCCGCAATCCCTTTGAGT
CAAGTTTTTCTGGACCTAGCATTATATCAGGTCCACTAACACCATCAGGTCATATACCTT
ATTCTGGAAACATTTCTCTTCGATCGGATAGCAGCACAACAAGTACTCGGTCCTTCGCAT
TTCCAGTGCTACAGACAGAGTGGAACAGCAGCCCTGTGAAGATGGCGAAAGCGGACCGCA
GGCGCTTGAGACGGGACCGAGGTTGGGGTTATAGAATCCTCTGCTGTAAATTCTGAATCT
GCATGCTCCCGCATATCTTTTCTTTTTGAGATCAGCTCTTCGCGTCGCGCCCCTGAGCTC
GTCGTGGTAGCCGTGTTAAATTCATTCAAAATGTTGCTCATTTCTCCCCTTTCCCCACCA
CCCCTCCTCTTGCTGCCCCCCTCCCTCCATGTCCTGCTCTCTCTTTTTTTTACTCATCTA
TAGCAGGTTAATGGCTTGTCTGGATTCGGTAGTGGCTTGTAATTTGCATTGAGAGTGAGA
AATGAAGGTATACTTGGTGAAAAGTATTGTAGCTGATGAGCATCCCTGGAGACTGTAAAA
CTGAAACTGGACTGTGTTACCCTGTTCAGAAGAANACAAAAAAAAAAAAAAAAA

consensusID : consensus_10321#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 702
fasta sequence 
                              [ATTATTGAAAGAACGTAATAAATAACAACCCAAAACGTTAATTTTGGGATGAAATTGACAATCTTCCTACCAAACATATCAAGGTTCAACAAATCAAATCATTTATTTTGTGTCACAATCAAGTCAATTTGATGAATGAGAATTTAAATGAAATGGATGGATAATGCAGCCGTCAGTAGTCAGTACTGATCCATATCATACCTATCAATAAAGACATCTGTCACAGCAAGTCACTGGACGAATACATTTTTCATTTACAAAACAAGATTTCATAAAATGAATCATCTACTAATTCTTATGAGGGCATTAATCTCCACAAGTCCAAATTCACCTCAGAACATATCCCAACGCCATAGTGTGAGGTAATGCAACTGTAAAGACTAGAAGCTACACCGTAGAAATAAGATCAGCTCTTTAAAGCCGCACAAACTGTGTATCATCTTTAATCTTCTGTTGATGAATGATGAATAGTAATGTTACGTTCAAAGCAAACCAATCTCTGGAATATCCTACAAACCAAGCAATCACCGTGCTTAATTTCTACAGCTAAGCCAATGCCATACAGATACAAAATACTCCTATAAGGTAGCAGAAGATTGATAGGTGAGAGATTCCATTACCAATCTTCATGATCTGCATTGNGTGCCTTAAGTCCTAGTCATGCCTCAAACAATTTCCTTGAAAATAGAGCTGCTTATTTTC]

[+] EMBL CA763877             [ATTATTGAAAGAACGTAATAAATAACAACCCAAAACGTTAATTTTGGGATGAAATTGACAATCTTCCTACCAAACATATCAAGGTTCAACAAATCAAATCATTTATTTTGTGTCACAATCAAGTCAATTTGATGAATGAGAATTTAAATGAAATGGATGGATAATGCAGCCGTCAGTAGTCAGTACTGATCCATATCATACCTATCAATAAAGACATCTGTCACAGCAAGTCACTGGACGAATACATTTTTCATTTACAAAACAAGATTTCATAAAATGAATCATCTACTAATTCTTATGAGGGCATTAATCTCCACAAGTCCAAATTCACCTCAGAACATATCCCAACGCCATAGTGTGAGGTAATGCAACTGTAAAGACTAGAAGCTACACCGTAGAAATAAGATCAGCTCTTTAAAGCCGCACAAACTGTGTATCATCTTTAATCTTCTGTTGATGAATGATGAATAGTAATGTTACGTTCAAAGCAAACCAATCTCTGGAATATCCTACAAACCAAGCAATCACCGTGCTTAATTTCTACAGCTAAGCCAATGCCATACAGATACAAAATACTCCTATAAGGTAGCAGAAGATTGATAGGTGAGAGATTCCATTACCAATCTTCATGATCTGCATTGNGTGCCTTAAGTCCTAGTCATGCCTCAAACAATTTCCTTGAAAATAGAGCTGCTTATTTTC]




>consensus_10321#1
ATTATTGAAAGAACGTAATAAATAACAACCCAAAACGTTAATTTTGGGATGAAATTGACA
ATCTTCCTACCAAACATATCAAGGTTCAACAAATCAAATCATTTATTTTGTGTCACAATC
AAGTCAATTTGATGAATGAGAATTTAAATGAAATGGATGGATAATGCAGCCGTCAGTAGT
CAGTACTGATCCATATCATACCTATCAATAAAGACATCTGTCACAGCAAGTCACTGGACG
AATACATTTTTCATTTACAAAACAAGATTTCATAAAATGAATCATCTACTAATTCTTATG
AGGGCATTAATCTCCACAAGTCCAAATTCACCTCAGAACATATCCCAACGCCATAGTGTG
AGGTAATGCAACTGTAAAGACTAGAAGCTACACCGTAGAAATAAGATCAGCTCTTTAAAG
CCGCACAAACTGTGTATCATCTTTAATCTTCTGTTGATGAATGATGAATAGTAATGTTAC
GTTCAAAGCAAACCAATCTCTGGAATATCCTACAAACCAAGCAATCACCGTGCTTAATTT
CTACAGCTAAGCCAATGCCATACAGATACAAAATACTCCTATAAGGTAGCAGAAGATTGA
TAGGTGAGAGATTCCATTACCAATCTTCATGATCTGCATTGNGTGCCTTAAGTCCTAGTC
ATGCCTCAAACAATTTCCTTGAAAATAGAGCTGCTTATTTTC

consensusID : consensus_10321#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 193
fasta sequence 
                              [ACATCTTTTGCTTGNTACAATGGTNCAACAACCCATCCATCAGAATATAGTTTTATGNAGGCCGGGCANCAAAAAATGTAGGGTAAAGCCATCCCGATNCGGCCTGAGGATGTTTCTTATGACAAGGATGTTGTGGAAAATCAAATTGCCNGATGTAATGGTCTCTTCTAATTATGGCGTTCAGTTTGTTAAA]

[+] EMBL OSS1408A             [ACATCTTTTGCTTGNTACAATGGTNCAACAACCCATCCATCAGAATATAGTTTTATGNAGGCCGGGCANCAAAAAATGTAGGGTAAAGCCATCCCGATNCGGCCTGAGGATGTTTCTTATGACAAGGATGTTGTGGAAAATCAAATTGCCNGATGTAATGGTCTCTTCTAATTATGGCGTTCAGTTTGTTAAA]




>consensus_10321#2
ACATCTTTTGCTTGNTACAATGGTNCAACAACCCATCCATCAGAATATAGTTTTATGNAG
GCCGGGCANCAAAAAATGTAGGGTAAAGCCATCCCGATNCGGCCTGAGGATGTTTCTTAT
GACAAGGATGTTGTGGAAAATCAAATTGCCNGATGTAATGGTCTCTTCTAATTATGGCGT
TCAGTTTGTTAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10321#0      TCCACCCTCCGCCCGGGAAATCCTTTTTAATATATTTCGAGAATTTTTTTGGTTCTCGGG 60
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      CTCGCCGCGGACGCGATCCCACTCCTCCTCTCCTCGCCGGCCTGGCCTCCCGCTGCTCCC 120
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      GGCGATTCTCCCGGAAACTTTTTTTTTTCGCTCGACGCGGTGAAGTGAAGTGAATTGCCG 180
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ---------------------------------ATTATTGAAAGAACGTAATAAATAACA 27
                                                                                   

consensus_10321#0      GTGCTATCCGGGGAGGGAGAGAAAGAGAGAGAAGTGAACTCAGGAAATAAGCAGCTCTAT 240
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ACCCAAAACGTTAATTTTGGGATGAAATTGACAATCTTCCTACCAAACATATCAAGGTTC 87
                                                                                   

consensus_10321#0      TTTCAAGGAAATTGTTTGAGGCATGACTAGGACTTAAGCACACAATGCAGATCATGAAGA 300
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      AACAAATCAAATCATTTATTTTGTGTCACAATCAAGTCAATTTGATGAATGAGAATTTAA 147
                                                                                   

consensus_10321#0      TTGATGATGGAAGGCCTTACCATAGTAATGTTTTTCATGAGCTTGTATCCAATGGCGGCC 360
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ATGAAATGGATGGATAATGCAGCCGTCA-GTAGTCAGTACTGATCCATATCATACCTATC 206
                                                                                   

consensus_10321#0      CTAAAGTAGATGGAGAAATTGAAAGAGAAACTAAACAACATATTTTGCTTGATACA-ATG 419
consensus_10321#2      -------------------------------------ACATCTTTTGCTTGNTACA-ATG 22
consensus_10321#1      AATAAAGACATCTGTCACAGCAAGTCACTGGACGAATACATTTTTCATTTACAAAACAAG 266
                                                            **** ***   **   * * * *

consensus_10321#0      GTACAACAAACCAATCCATCAGAATATAGTTTTATGAAGGC-CGGGCAACAAAA--TGTA 476
consensus_10321#2      GTNCAACAACCCA-TCCATCAGAATATAGTTTTATGNAGGC-CGGGCANCAAAAAATGTA 80
consensus_10321#1      ATTTCATAAAATGAATCATC--TACTAATTCTTATGAGGGCATTAATCTCCACAAGTCCA 324
                        *   * **       ****   *   * * *****  ***        * * *  *  *

consensus_10321#0      GA-TAAAGCCATCCAGATACGGCCTGAGGATGTTTCTTATGACAAGGATGTTGTGGAAA- 534
consensus_10321#2      GGGTAAAGCCATCCCGATNCGGCCTGAGGATGTTTCTTATGACAAGGATGTTGTGGAAAA 140
consensus_10321#1      AATTCA---CCTCAGAACATATCCCAACGCCATAGTGTGAGGTAATGCAACTGTAAAGAC 381
                          * *   * **   *     **  * *   *    *  *  ** *    ***  * * 

consensus_10321#0      TCAAA-TTGC-CAGATATAATGGTCTCTTCTAATTATGGC-GTTCAGTTTGTTAAGGATG 591
consensus_10321#2      TCAAA-TTGC-CNGATGTAATGGTCTCTTCTAATTATGGC-GTTCAGTTTGTTAAA---- 193
consensus_10321#1      TAGAAGCTACACCGTAGAAATAAGATCAGCTCTTTAAAGCCGCACAAACTGTGTATCATC 441
                       *  **  * * * *    ***    **  **  ***  ** *  **   ***  *     

consensus_10321#0      TCTGCATTGATGAGGGAGTACTTGCTGATCAGAAGGCTATAGCAGAAAAGGTGTCACTGA 651
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      TTTAATCTTCTGTTGATGAA--TGATGAATAGTAATGTTACGTTCAAAGCAAACCAATCT 499
                                                                                   

consensus_10321#0      ACCTGAATTCTTCAAAGGGAGATACAAATGGTATTCGGATAAAAGAAACAGCAGATGAAC 711
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      CTGGAATATCCTACAAACCAAGCAATCACCGTGCTTAATTTCTACAGCTAAGCCAATGCC 559
                                                                                   

consensus_10321#0      CTGCAAAATCTGTTAATGATTTAAAATCGCAAATAGTTGTCCTGCCCGAAGCATGTGTTA 771
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ATACAGATACAAAATACTCCTATAAGGTAGCAGAAGATTGATAGGTGAGAGATTCCATTA 619
                                                                                   

consensus_10321#0      CTGATGGGGATACTGTGGAACAAAATCATCCTTGCAAATTGCATGATCTCGAAGGCAACA 831
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      CCAATCTTCATGATCTGCATTGNGTGCCTTAAGTCCTAGTCATGCCTCAAACAATTTCCT 679
                                                                                   

consensus_10321#0      GTAGTGTAGATGGATTGACTGTTGTAAATGTTGAGAAATCGACGCCCAAACAATTAGTAA 891
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      TGAAAATAGAGCTGCTTATTTTC------------------------------------- 702
                                                                                   

consensus_10321#0      GTAATGACAATGCAGAATATTGCCAACAAATGGGTGCAGATGTTTCTGAGAGCAGTGAAA 951
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      ATCATGGGCCAAATCTCAATGGAGAACCAGTTGATCAGGTTCCATCAAATGATTCCCATG 1011
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      AAACTGGAGCTAGTATTGCATCTGCGATCACTAACGTCAATGGTTTATCAGTTGAGTCAA 1071
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      CTGCTGATGGCCACTCTGGGGTGGTGACTGAAGATGGTGTTTCTGGTGTGGCACTAAATA 1131
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      AGACAGAAATCAACCAAATTAATCACTATAATCCCTTCATCGCATATGGATCATTAGAGG 1191
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      ACACGTGGGAACCCAAGTACTCCCTACCTACAATTGTTGATGATGTTTATTCAGTGCCCT 1251
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      GTCCTGTCGAAAAGACAGACAGTTTTAGTGATATCGTCTATGGTGCACTGCGAGGATTTA 1311
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      ATTTTCTTGAAACTGGTGAATCCATTGCAGAAGACAGTACATTAGATTCTGTTGTAGAAA 1371
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      ATTCAAGTATGACTGATGTCCAAGCATCTGAAGAAAAAGATGAAGCAAGAAGTGATGACA 1431
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      TTTTGAGTGATGAGAGAAAAATTCCTGTTGATCAGAGAAGTCCTGTTGAAAATTCAGACA 1491
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      GTTTGAGTGATCCTGTTGACAGGGCACTTAGTTCTACTGAAACAGATGGAGCGAGAAATG 1551
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      AAGACAGTAGATTAGACTCTACTGAAGCAAGTCCAAGTAGGTCGTATGTCCAACCTTCGG 1611
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      AAGATAGAAATGATCAGGTGGATAATTTCGTTTATGGAATTAGAACTGATGCAGCACATG 1671
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      GGACGAGTTCAGGTACATCTCCGTTAACTGGTAAGACAGAGCCTATTGATGCGAAAAGTG 1731
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      AGAATGATCCAAAATGCGAGATCGATAGTGTCCAAGACGGACATGATTTCAACCCAAGAG 1791
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      AAGCAAACGATGGCACAAATATAAGTGAGGACAACAAAGATAGTAAGAGTTCCACACGGC 1851
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      AAACAGGACCAGTAACTGAACAAAATGAACCTGACAGTGCAAAGATGACAATGCAAACAG 1911
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      AACCTGTAGCTCAACGGAATGAACCTGACAGTGCAAAAGTGACCATGCAAACAGAATCTG 1971
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      TAGCTCAACCAAATGAAGCTGACAGTGCAAAAGTAACAGCTCGAAATGTTATCCGCAATC 2031
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      CCTTTGAGTCAAGTTTTTCTGGACCTAGCATTATATCAGGTCCACTAACACCATCAGGTC 2091
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      ATATACCTTATTCTGGAAACATTTCTCTTCGATCGGATAGCAGCACAACAAGTACTCGGT 2151
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      CCTTCGCATTTCCAGTGCTACAGACAGAGTGGAACAGCAGCCCTGTGAAGATGGCGAAAG 2211
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      CGGACCGCAGGCGCTTGAGACGGGACCGAGGTTGGGGTTATAGAATCCTCTGCTGTAAAT 2271
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      TCTGAATCTGCATGCTCCCGCATATCTTTTCTTTTTGAGATCAGCTCTTCGCGTCGCGCC 2331
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      CCTGAGCTCGTCGTGGTAGCCGTGTTAAATTCATTCAAAATGTTGCTCATTTCTCCCCTT 2391
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      TCCCCACCACCCCTCCTCTTGCTGCCCCCCTCCCTCCATGTCCTGCTCTCTCTTTTTTTT 2451
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      ACTCATCTATAGCAGGTTAATGGCTTGTCTGGATTCGGTAGTGGCTTGTAATTTGCATTG 2511
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      AGAGTGAGAAATGAAGGTATACTTGGTGAAAAGTATTGTAGCTGATGAGCATCCCTGGAG 2571
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      ACTGTAAAACTGAAACTGGACTGTGTTACCCTGTTCAGAAGAANACAAAAAAAAAAAAAA 2631
consensus_10321#2      ------------------------------------------------------------
consensus_10321#1      ------------------------------------------------------------
                                                                                   

consensus_10321#0      AAA 2634
consensus_10321#2      ---
consensus_10321#1      ---


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)