cluster # 10810

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Oryza sativa
cluster # 10810 cluster # 10810 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10810#0 length = 890 sequences # 8
consensusID : consensus_10810#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 890
fasta sequence
                              [CCCAACTTCTTAAAGAACAAAAAACGATCAGCCATGAAGAGCGGCAGCCTGCTGACGCTC-ACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCTCCTCCGCCGCTGTCACCCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACTGCGCCGCCGCCTGCGAGGACTGCAAGCGTGCCGACGGCGGCGGCTACGTCTGCCGGGACTGGTACTGGGGCGTCAACCCCGGGCCCAAGTGCACCGGCGGCGGCGGCGAGGAGGCGGTGAGGTCGAGGCCGTGGAAATGCTGCGACGACGCCGTGTGCACAAGGTCGATGCCGCCGACGTGCAGCTGCCAGGACAAGGTGAAGTCGTGCTCCGGCGGCTGCGGCAAGTGCGTGCAGGTGGAGTCGCAGCCGCCGCGCTTCCGCTGCCTCGATCGCTACCACGGCTTCCCGGGGCCCAAGTGTCACAA-CCAGCCAGC-TTAATTAGCTACTCATGTTAATTAGCCTCAGATCATACGATCCAA-CGGTGAATAAGAGCGACGCGTCGAGC-AGGGGCGCACGCGCTGACCGCTCGATC-AGCG-TTAACGCCTTGC-TTGCTGCCG-AGTAGCAGTGACATATGTGTAACATT-CGTGTGGTCACGTATG-TTTTTT-TCCTTTATTGTG-TTTTTTTTCTTTATTGTGTTTGTTTTATCTGGATCGTGAGGG-AATGTTTCGGTGACCAGAGTACGTAGTACTAGTATGTTGTGGTTGCTGTCCAATAAATAAGATGAATTTGGTNGCAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK102138             [CCCAACTTCTTAAAGAACAAAAAACGATCAGCCATGAAGAGCGGCAGCCTGCTGACGCTC ACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCTCCTCCGCCGCTGTCACCCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACTGCGCCGCCGCCTGCGAGGACTGCAAGCGTGCCGACGGCGGCGGCTACGTCTGCCGGGACTGGTACTGGGGCGTCAACCCCGGGCCCAAGTGCACCGGCGGCGGCGGCGAGGAGGCGGTGAGGTCGAGGCCGTGGAAATGCTGCGACGACGCCGTGTGCACAAGGTCGATGCCGCCGACGTGCAGCTGCCAGGACAAGGTGAAGTCGTGCTCCGGCGGCTGCGGCAAGTGCGTGCAGGTGGAGTCGCAGCCGCCGCGCTTCCGCTGCCTCGATCGCTACCACGGCTTCCCGGGGCCCAAGTGTCACAA CCAGCCAGC TTAATTAGCTACTCATGTTAATTAGCCTCAGATCATACGATCCAA CGGTGAATAAGAGCGACGCGTCGAGC AGGGGCGCACGCGCTGACCGCTCGATC AGCG TTAACGCCTTGC TTGCTGCCG AGTAGCAGTGACATATGTGTAACATT CGTGTGGTCACGTATG TTTTTT TCCTTTATTGTGTTTTTTTTTCTTTATTGTGTTTGTTTTATCTGGATCGTGAGGG AATGTTTCGGTGACCAGAGTACGTAGTACTAGTATGTTGTGGTTGCTGTCCAATAAATAAGATGA                               ]
[+] EMBL AK105455             [   AACTTCTTAAAGAACAAAAAACGATCAGCCATGAAGAGCGGCAGCCTGCTGACGCTC ACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCTCCTCCGCCGCTGTCACCCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACTGCGCCGCCGCCTGCGAGGACTGCAAGCGTGCCGACGGCGGCGGCTACGTCTGCCGGGACTGGTACTGGGGCGTCAACCCCGGGCCCAAGTGCACCGGCGGCGGCGGCGAGGAGGCGGTGAGGTCGAGGCCGTGGAAATGCTGCGACGACGCCGTGTGCACAAGGTCGATGCCGCCGACGTGCAGCTGCCAGGACAAGGTGAAGTCGTGCTCCGGCGGCTGCGGCAAGTGCGTGCAGGTGGAGTCGCAGCCGCCGCGCTTCCGCTGCCTCGATCGCTACCACGGCTTCCCGGGGCCCAAGTGTCACAA CCAGCCAGC TTAATTAGCTACTCATGTTAATTAGCCTCAGATCATACGATCCAA CGGTGAATAAGAGCGACGCGTCGAGC AGGGGCGCACGCGCTGACCGCTCGATC AGCG TTAACGCCTTGC TTGCTGCCG AGTAGCAGTGACATATGTGTAACATT CGTGTGGTCACGTATGTTTTTTT TCCTTTATTGTG TTTTTTTTCTTTATTGTGTTTGTTTTATCTGGATCGTGAGGG AATGTTTCGGTGACCAGAGTACGTAGTACTAGTATGTTGTGGTTGCTGTCCAATAAATAAGATGA                               ]
[+] EMBL OSR14061A            [                 CAAAAAACGATCAGCCATGAAGAGCGGCAG CTGCTGACGCTC ACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCTCCTCCGCCGCTGTCACCCCCAACAGCAACATCCGCCTCCCCACCGANGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGNTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA754640             [                          ATCAGCCATGAAGAGCGGCAGCCTGCTGACGCTC ACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCTCCTCCGCCGCTGTCACCCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACTGCGCCGCCGCCTGCGAGGACTGCAAGCGTGCCGACGGCGGCGGCTACGTCTGCCGGGACTGGTACTGGGGCGTCAACCCCGGGCCCAAGTGCACCGGCGGCGGCGGCGAGGAGGCGGTGAGGTCGAGGCCGTGGAAATGCTGCGACGACGCCGTGTGCACAAGGTCGATGCCGCCGACGTGCAGCTGCCAGGACAAGGTGAAGTCGTGCTCCGGCGGCTGCGGCAAGTGCGTGCAGGTGGAGTCGCAGCCGCCGCGCTTCCGCTGCCTCGATCGCTACCACGGCTTCCCGGGGCCCAAGTGTCACAA CCAGCCAGC TTAATTAGCTACTCATGTTAATTAGCCTCAGATCATACGATCCAA CGGTGAATAA                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU030400             [                            CAGCCATGAAGAGCGGCA CCTGCTGAC NTCAACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCNCCTCCGCCGCTGTCACNCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAG TGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACNGCGCCGCCGCCTGCGAGGACTNCAAGCGTGCCGACGG GGCGGCTACGTCTGCCGGGACTGGTACTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BE040470             [                                                                                                              TCACCCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCTTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACTGCGCCGCCGCCTGCGAGGACTGCAAGCGTGCCGACGGCGGCAGCTACGTCTGCCGGGACTGGTACTGGGGCGTCAACCCCGGGCCCAAGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU184150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGCTGCCTCGATCGCTACCACGGCTTCCCGGGGCCCAAGTGTCNCAACCCAGCCAGCTTTAATTAGCTACTCATGTTAATTAGCCTCAGATCATACGATCCAACCGGTGAATAGAAGCGACGCGTCGAGCAAGGGGCGCACGCGCTGACCGCTCGATCAAGCGTTTAACGCCTTGCTTTGCTGCCGAAGTAGCAGTGACATATGTGTAACATT CGTGTGGTCACGTATG TTTTTT TCC TTATTGTG TTTTTTTTCTTTATGGTGTTTG TTTATCTGGATCGTGAGGGAAATGTTTCGGTGACCAGAGTACGTAGTACTAaaaa                                                             ]
[+] EMBL AU095051             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGGGCGCACGCGCTGACCGCTCGATC AGCG TTAACGCCTTGC TTGCTGCCG AGTAGCAGTGACATATGTGTAACATTNCGTGTGGTCACGTATG TTTTTTNCCCTTTATTGTG TTTTTTTTCNTTATTGTGTTTGTTTTATCTGGATCGTGAGGG AATGTTTCGGTGACCAGAGTACGTAGTACTAGTATGTTGTGGTTGNTGTCCAATAAATAAGATGAATTTGGTNGCAAAAAAAAAAAAAAAAAAAAA]




>consensus_10810#0
CCCAACTTCTTAAAGAACAAAAAACGATCAGCCATGAAGAGCGGCAGCCTGCTGACGCTC
ACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCTCCTCCGCCGCTGTCACCCCCAAC
AGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGC
TGCGACAAGCTGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGAC
GAGGTCGACCACTGCGCCGCCGCCTGCGAGGACTGCAAGCGTGCCGACGGCGGCGGCTAC
GTCTGCCGGGACTGGTACTGGGGCGTCAACCCCGGGCCCAAGTGCACCGGCGGCGGCGGC
GAGGAGGCGGTGAGGTCGAGGCCGTGGAAATGCTGCGACGACGCCGTGTGCACAAGGTCG
ATGCCGCCGACGTGCAGCTGCCAGGACAAGGTGAAGTCGTGCTCCGGCGGCTGCGGCAAG
TGCGTGCAGGTGGAGTCGCAGCCGCCGCGCTTCCGCTGCCTCGATCGCTACCACGGCTTC
CCGGGGCCCAAGTGTCACAACCAGCCAGCTTAATTAGCTACTCATGTTAATTAGCCTCAG
ATCATACGATCCAACGGTGAATAAGAGCGACGCGTCGAGCAGGGGCGCACGCGCTGACCG
CTCGATCAGCGTTAACGCCTTGCTTGCTGCCGAGTAGCAGTGACATATGTGTAACATTCG
TGTGGTCACGTATGTTTTTTTCCTTTATTGTGTTTTTTTTCTTTATTGTGTTTGTTTTAT
CTGGATCGTGAGGGAATGTTTCGGTGACCAGAGTACGTAGTACTAGTATGTTGTGGTTGC
TGTCCAATAAATAAGATGAATTTGGTNGCAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case