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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11020#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1626 fasta sequence
[CCTGAGATTCCGTCGACGCCATTGCTTGCTTGCTTGTTGCTTCCATTCCATTCCATTCCACACACGAGTGAACGAGCGGGGAAGGTTCTAGAAGGTTCGGTTAGAGTTTTCTGGTCTGCCATGGCGTCCACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCGCCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCGTCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCTCCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGGACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTGGTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGAAAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGA-CGGTGAGGAGCAGCCGGAGGAGGAGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAAGAGGGCGGCGCGGCTTCCGCATCTCCACCTACGCCCTCTTCTGGATCCGCCACTCCATCGTCCGCGCCATCACCCTCTCCAACTTCACCCGCTTCCCCTTCGCCATGGAATCCGAGAGGCAGGAGATCCACAGGGCTCGGGAGGAGCTGGCGTTCGAGCTGGGGAGGGCGCCGACGGAGGAGGAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTGCGGATGACGAGGCCCACCTACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACGACGACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTCCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAGATACATGTGAAAACCA-CCATGCAATCGTCTCGTCTCTCTGCTGTGCATAAAACATGTAGTACAAGCATGTATTCCTAGCAATCTTACTAATTCCCCAAACCTGCATAGCATTAGCAAATACCAACAACCACAGGTATTCATTCTACTCTGCATATTCTGCTGTATATAATTTCTGCATGATCCCCTCTGCATTGCAGATTACAGATACAAAATA-CACTGAGATGA-TTCCGTGTTATAGATACAGGAACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACGAGTTTTTTTTCCAAGTGAGGTTGCGGTACATATGCACCTCAGATGTAAGTAATTCTTACTTAGCATATAGATACGGTGCAGGGGATGATCCGATCCCTGCTTAGCTTAGCTCATACGCTGTGCATTCAAAAGAAAAGACATTTCCTTTTCCTATCAACTGATGCTCAGTCTGTATA]
[+] EMBL AK105697 [CCTGAGATTCCGTCGACGCCATTGCTTGCTTGCTTGTTGCTTCCATTCCATTCCATTCCACACACGAGTGAACGAGCGGGGAAGGTTCTAGAAGGTTCGGTTAGAGTTTTCTGGTCTGCCATGGCGTCCACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCGCCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCGTCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCTCCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGGACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTGGTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGAAAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGA CGGTGAGGAGCAGCCGGAGGAGGAGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAAGAGGGCGGCGCGGCTTCCGCATCTCCACCTACGCCCTCTTCTGGATCCGCCACTCCATCGTCCGCGCCATCACCCTCTCCAACTTCACCCGCTTCCCCTTCGCCATGGAATCCGAGAGGCAGGAGATCCACAGGGCTCGGGAGGAGCTGGCGTTCGAGCTGGGGAGGGCGCCGACGGAGGAGGAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTGCGGATGACGAGGCCCACCTACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACGACGACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTCCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAGATACATGTGAAAACCA CCATGCAATCGTCTCGTCTCTCTGCTGTGCATAAAACATGTAGTACAAGCATGTATTCCTAGCAATCTTACTAATTCCCCAAACCTGCATAGCATTAGCAAATACCAACAACCACAGGTATTCATTCTACTCTGCATATTCTGCTGTATATAATTTCTGCATGATCCCCTCTGCATTGCAGATTACAGATACAAAATA CACTGAGATGA TTCCGTGTTATAGATACAGGAACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACGAGTTTTTTTTCCAAGTGAGGTTGCGGTACATATGCACCTCAGATGTAAGTAATTCTTACTTAGCATATAGATACGGTGCAGGGGATGATCCGATCCCTGCTTAGCTTAGCTCATACGCTGTGCATTCAAAAGAAAAGACATTTCCTTTTCCTATCAACTGATGCTCAGTCTGTATA]
[-] EMBL BI810000 [ CCGTCGACGCCATTGCTTGCTTG TGCTTCCATTCCATTCCATTCCACACACGAGTGAACGAGCGGGGAAGGTTCTAGAAGGTTCAGTTAGAGTTTTCTGGTCTGCCATGGCGTCCACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCGCCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCGTCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCCGCGAAGCAGGGCACGGCCAAGCTCCCTCCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGGACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTGGTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGAAAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGACCGGTGAGGAGCAG ]
[+] EMBL BM420886 [ CCCTCCTCCGCCTCGCCATCGACGACCTCCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAGATACATGTGAAAACCACCCATGCAATCGTCTCGTCTCTCTGCTGTGCATAAAACGTGTAGTACAATCATGTATTCCTAGCAATCTTACTAATTCCCC AACCTGCATAGCATTAGC AATACCAACAACCACAGGTATTCATT TACTCTGCATATTCT CGGTATATAATTTCGGCAGGATCCCCTCTGCATGCCAGATTACAGATACCAAATACCACTGAGATGATTTCCGNGTTAaaaa ]
consensusID : consensus_11020#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1588 fasta sequence
[TTGCTTGCTTGTTGCTTCCATTCCATTCCATTCCACACACGAGTGAACGAGCGGGGAAGGTTCTAGAAGGTTCGGTTAGAGTTTTCTGGTCTGCCATGGCGTCCACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCGCCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCGTCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCTCCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGGACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTGGTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGAAAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGACGGTGAGGAGCAGCCGGAGGAGGAGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAAGAGGGCGGCGGCGGCGCCGGCAAGGTGGAAGACGAGGAGCGGGGGTTCGAGGAGATGCTGCTCCGGGAGCACGCCGTGTCCACCGACATGGGCAGCCTCGACTGGAAGCGGATGAAGATCCCTCCCGTGCTCACCTCCGCCCAGAGCATCCGCCTCTTCAGGATCATGCAGCCCATGAAGGCGATCATGGAAATGAAGGAGAACCTGGAGAACGAAGTGCAGAGCGAGCCAAACGACGCACAGCTCGCCGAGGCCATGAACATGTCCGTTCTTCAGATGAGGCGCCATCTCGAGGTCGGCCGAGCTGCCAGGAACAAGCTCATCAAGCATAATCTCCGGCTGGTGCTGTACACGATCAACAAGTACTACCCGGACATGTCCAACGACGAGAGGTTCGACGACATCTGCCAGGCGGGCGCCAACGGCTTGATCACGGCGATCGACCGGTTCGAGCCCAAGCGCGGCTTCCGCATCTCCACCTACGCCCTCTTCTGGATCCGCCACTCCATCGTCCGCGCCATCACCCTCTCCAACTTCACCCGCTTCCCCTTCGCCATGGAATCCGAGAGGCAGGAGATCCACAGGGCTCGGGAGGAGCTGGCGTTCGAGCTGGGGAGGGCGCCGACGGAGGAGGAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTGCGGATGACGAGGCCCACCTACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACGACGACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTCCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAG]
[+] EMBL CB671445 [TTGCTTGCTTGTTGCTTCCATTCCATTCCATTCCACACACGAGTGAACGAGCGGGGAAGGTTCTAGAAGGTTCGGTTAGAGTTTTCTGGTCTGCCATGGCGTCCACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCGCCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCGTCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCTCCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGGACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTGGTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGAAAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGACGGTGAGGAGCAGCCGGAGGAGGAGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAAGAGGGCGGCGGCGGCGCCGGCAAGGTGGAAGACGAGGAGCGGGGGTTCGAGGAGATGCTGCTCCGGGAGCACGCCGTGTCCACCGACATGGGCAGCCTCGACTGGAAGCGGATGAAGATCCCTCCCGTGCTCACCTCCGCCCAGAGCATCCGCCTCTTCAGGATCATGCAGCCCATGAAGGCGATCATGGAAATGAAGGAGAACCTGGAGAACGAAGTGCAGAGCGAGCCAAACG ]
[+] EMBL AB096071 [ ACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCGCCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCGTCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCTCCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGGACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTGGTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGAAAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGACGGTGAGGAGCAGCCGGAGGAGGAGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAAGAGGGCGGCGGCGGCGCCGGCAAGGTGGAAGACGAGGAGCGGGGGTTCGAGGAGATGCTGCTCCGGGAGCACGCCGTGTCCACCGACATGGGCAGCCTCGACTGGAAGCGGATGAAGATCCCTCCCGTGCTCACCTCCGCCCAGAGCATCCGCCTCTTCAGGATCATGCAGCCCATGAAGGCGATCATGGAAATGAAGGAGAACCTGGAGAACGAAGTGCAGAGCGAGCCAAACGACGCACAGCTCGCCGAGGCCATGAACATGTCCGTTCTTCAGATGAGGCGCCATCTCGAGGTCGGCCGAGCTGCCAGGAACAAGCTCATCAAGCATAATCTCCGGCTGGTGCTGTACACGATCAACAAGTACTACCCGGACATGTCCAACGACGAGAGGTTCGACGACATCTGCCAGGCGGGCGCCAACGGCTTGATCACGGCGATCGACCGGTTCGAGCCCAAGCGCGGCTTCCGCATCTCCACCTACGCCCTCTTCTGGATCCGCCACTCCATCGTCCGCGCCATCACCCTCTCCAACTTCACCCGCTTCCCCTTCGCCATGGAATCCGAGAGGCAGGAGATCCACAGGGCTCGGGAGGAGCTGGCGTTCGAGCTGGGGAGGGCGCCGACGGAGGAGGAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTGCGGATGACGAGGCCCACCTACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACGACGACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTCCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAG]
[+] EMBL AB096011 [ ACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCGCCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCGTCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCTCCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGGACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTGGTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGAAAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGACGGTGAGGAGCAGCCGGAGGAGGAGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAAGAGGGCGGCGGCGGCGCCGGCAAGGTGGAAGACGAGGAGCGGGGGTTCGAGGAGATGCTGCTCCGGGAGCACGCCGTGTCCACCGACATGGGCAGCCTCGACTGGAAGCGGATGAAGATCCCTCCCGTGCTCACCTCCGCCCAGAGCATCCGCCTCTTCAGGATCATGCAGCCCATGAAGGCGATCATGGAAATGAAGGAGAACCTGGAGAACGAAGTGCAGAGCGAGCCAAACGACGCACAGCTCGCCGAGGCCATGAACATGTCCGTTCTTCAGATGAGGCGCCATCTCGAGGTCGGCCGAGCTGCCAGGAACAAGCTCATCAAGCATAATCTCCGGCTGGTGCTGTACACGATCAACAAGTACTACCCGGACATGTCCAACGACGAGAGGTTCGACGACATCTGCCAGGCGGGCGCCAACGGCTTGATCACGGCGATCGACCGGTTCGAGCCCAAGCGCGGCTTCCGCATCTCCACCTACGCCCTCTTCTGGATCCGCCACTCCATCGTCCGCGCCATCACCCTCTCCAACTTCACCCGCTTCCCCTTCGCCATGGAATCCGAGAGGCAGGAGATCCACAGGGCTCGGGAGGAGCTGGCGTTCGAGCTGGGGAGGGCGCCGACGGAGGAGGAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTGCGGATGACGAGGCCCACCTACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACGACGACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTCCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAG]
[+] EMBL CK085055 [ GCCGGCAAGGTGGAAGACGAGGAGCGGGGGTTCGAGGAGATGCTGCTCCGGGAGCACGCCGTGTCCACCGACATGGGCAGCCTCGACTGGAAGCGGATGAAGATCCCTCCCGTGCTCACCTCCGCCCAGAGCATCCGCCTCTTCAGGATCATGCAGCCCATGAAGGCGATCATGGAAATGAAGGAGAACCTGGAGAACGAAGTGCAGAGCGAGCCAAACGACGCACAGCTCGCCGAGGCCATGAACATGTCCGTTCTTCAGATGAGGCGCCATCTCGAGGTCGGCCGAGCTGCCAGGAACAAGCTCATCAAGCATAATCTCCGGCTGGTGCTGTACACGATCAACAAGTACTACCCGGACATGTCCAACGACGAGAGGTTCGACGACATCTGCCAGGCGGGCGCCAACGGCTTGATCACGGCGATCGACCGGTTCGAGCCCAAGCGCGGCTTCCGCATCTCCACCTACGCCCTCTTCTGGATCCGCCACTCCATCGT ]
consensusID : consensus_11020#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 742 fasta sequence
[GACGGAGGAGGAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTGCGGATGACGAGGCCCACCTACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACGACGACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTCGTAAGTTGTAAATGAACAGAACAATTCTGTTCTTGAATTTCCTTTGAAATGTGATTCGAATCGAATGTATGTATAAATGTGCAGCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAGATACATGTGAAAACCACCATGCAATCGTCTCGTCTCTCTGCTGNGCATAAAACGTGTAGTACAATCATGTATTCCTAGCAATCTTACTAATTCCCCAAACCTGCNTAGCATTAGCAAATACCCAACAACCNCAGGTACTTATTCTACTCTTGCATATTNNGCTGGATATAATTNCTGCATGAATCCCCTTTTGCTTTGCNGATTTCNGGTTCCAAATANCCCTTGGGATGANTTCCCGGGGTTAAAAAAAAAAAAAAAAAAAAAAACG]
[+] EMBL CA767132 [GACGGAGGAGGAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTGCGGATGACGAGGCCCACCTACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACGACGACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTCGTAAGTTGTAAATGAACAGAACAATTCTGTTCTTGAATTTCCTTTGAAATGTGATTCGAATCGAATGTATGTATAAATGTGCAGCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAGATACATGTGAAAACCACCATGCAATCGTCTCGTCTCTCTGCTGNGCATAAAACGTGTAGTACAATCATGTATTCCTAGCAATCTTACTAATTCCCCAAACCTGCNTAGCATTAGCAAATACCCAACAACCNCAGGTACTTATTCTACTCTTGCATATTNNGCTGGATATAATTNCTGCATGAATCCCCTTTTGCTTTGCNGATTTCNGGTTCCAAATANCCCTTGGGATGANTTCCCGGGGTTAAAAAAAAAAAAAAAAAAAAAAACG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11020#0 CCTGAGATTCCGTCGACGCCATTGCTTGCTTGCTTGTTGCTTCCATTCCATTCCATTCCA 60
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 -------------------------TTGCTTGCTTGTTGCTTCCATTCCATTCCATTCCA 35
consensus_11020#0 CACACGAGTGAACGAGCGGGGAAGGTTCTAGAAGGTTCGGTTAGAGTTTTCTGGTCTGCC 120
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 CACACGAGTGAACGAGCGGGGAAGGTTCTAGAAGGTTCGGTTAGAGTTTTCTGGTCTGCC 95
consensus_11020#0 ATGGCGTCCACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCG 180
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 ATGGCGTCCACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCG 155
consensus_11020#0 CCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCG 240
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 CCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCG 215
consensus_11020#0 TCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCT 300
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 TCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCT 275
consensus_11020#0 CCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGG 360
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 CCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGG 335
consensus_11020#0 ACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTG 420
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 ACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTG 395
consensus_11020#0 GTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGA 480
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 GTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGA 455
consensus_11020#0 AAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGACGGTGAGGAGCAGCCGGAGGAGG 540
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 AAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGACGGTGAGGAGCAGCCGGAGGAGG 515
consensus_11020#0 AGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAA 600
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 AGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAA 575
consensus_11020#0 GAGGGCGGCG-CGGCTTCCGCATCTCCACCTACGCCCTCTTCTGGATCCGCCACTCCATC 659
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 GAGGGCGGCGGCGGCGCCGGCAAGGTGGAAGACGAGGAGCGGGGGTTCGAGGAGATGCTG 635
consensus_11020#0 GTCCGCGCCATCACCCTCTCCAACTTCACCCGCTTCCCCTTCGCCATGGAATCCGAGAGG 719
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 CTCCGGGAGCACGCCGTGTCCACCGACATGGGCAGCCTCGACTGGAAGCGGATGAAGATC 695
consensus_11020#0 CAGGAGATCCACAGGGCTCGGGAGGAGCTGGCGTTCGAGCTGGGGAGGGCGCCGACGGAG 779
consensus_11020#2 -----------------------------------------------------GACGGAG 7
consensus_11020#1 CCTCCCGTGCTCACCTCCGCCCAGAGCATCCGCCTCTTCAGGATCATGCAGCCCATGAAG 755
* * **
consensus_11020#0 GAG------GAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTG 833
consensus_11020#2 GAG------GAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTG 61
consensus_11020#1 GCGATCATGGAAATGAAGGAGAACCTGGAGAACGAAGTGCAGAGCGAGCCAAACGACGCA 815
* * ** *** * **** *** * * *** * * *** *
consensus_11020#0 CGGAT-GACGAGGCC-----CACCTACTCCCTCCACGCGCG---------------TAAC 872
consensus_11020#2 CGGAT-GACGAGGCC-----CACCTACTCCCTCCACGCGCG---------------TAAC 100
consensus_11020#1 CAGCTCGCCGAGGCCATGAACATGTCCGTTCTTCAGATGAGGCGCCATCTCGAGGTCGGC 875
* * * * ******* ** * * ** ** * * *
consensus_11020#0 AGGGTCACCCAGGAGGAGCTCATCAA-CGAGGTCACCGACGACGACGCCATCGGCG-TCG 930
consensus_11020#2 AGGGTCACCCAGGAGGAGCTCATCAA-CGAGGTCACCGACGACGACGCCATCGGCG-TCG 158
consensus_11020#1 CGAGCTGCCAGGAACAAGCTCATCAAGCATAATCTCCGGC--TGGTGCTGTACACGATCA 933
* * ** * * ********** * ** *** * * ** * ** **
consensus_11020#0 ACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTC------------- 977
consensus_11020#2 ACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTC-GTAAGTTGTAAA 217
consensus_11020#1 ACAAGTACTACCCGGACATGTCCAACGACGAGAGGTTCGACGACATCTGCCAGGCGGGCG 993
*** * ** *** * * * ******** **
consensus_11020#0 ------------------------------------------------------------
consensus_11020#2 TGAACAGAACAATTCTGTTCTTGAATTTCCTTTGAAATGTGATTCGAATC-GAATGTATG 276
consensus_11020#1 CCAACGGCTTGATCACGGCGATCGACCGGTTCGAGCCCAAGCGCGGCTTCCGCATCTCCA 1053
consensus_11020#0 -------------CTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTT 1024
consensus_11020#2 TATAAATGTGCAGCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTT 336
consensus_11020#1 CCTACGCCCTCTTCTGGATCCGCC--ACTCCATCGTCCGCGCCATCACCCTCTCCAACTT 1111
****** *** * *** * *** * * ** * **
consensus_11020#0 CGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTC 1084
consensus_11020#2 CGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTC 396
consensus_11020#1 C--ACCCGCTTCCCCTTCGCCATGGAATCCGAGAG-----GCAGGAGATCCACAGGGCTC 1164
* * * * *** * *** * ** *** * * * ***
consensus_11020#0 GAG-GGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGC 1143
consensus_11020#2 GAG-GGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGC 455
consensus_11020#1 GGGAGGAGCTGGCGTTCGAGCTGGGG---AGGGCGCCGACGGAGGAGGAGGTGATGAAGA 1221
* * **** *** * * ** * * * ***** * * ** ** * *
consensus_11020#0 GAGTGGAA-TACCTGCGCAGATACATGTGAAAACCACCATGCAATCGTCTCGTCTCTCTG 1202
consensus_11020#2 GAGTGGAA-TACCTGCGCAGATACATGTGAAAACCACCATGCAATCGTCTCGTCTCTCTG 514
consensus_11020#1 AGGTGGGGCTGTCTCCGGCGAGGTACCGCGA---CGTGGTGCGGATGACGAGGCCCACCT 1278
**** * ** ** ** * * * *** * * * * * *
consensus_11020#0 CTGTGCATAAAACATGTAGTACAAGCATGTATTCCTAGCAATCTTACTAATTCCCCAAAC 1262
consensus_11020#2 CTGNGCATAAAACGTGTAGTACAATCATGTATTCCTAGCAATCTTACTAATTCCCCAAAC 574
consensus_11020#1 ACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACG 1338
* * * *** * ** * *** ** * ** ** *
consensus_11020#0 CTGCATAGCATTAGCAAATAC-C-AACAACCACAGGTATTCATTCTACTCT-GCATATTC 1319
consensus_11020#2 CTGCNTAGCATTAGCAAATAC-CCAACAACCNCAGGTACTTATTCTACTCTTGCATATTN 633
consensus_11020#1 ACG-ACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGAC 1397
* *** ** ** * * ** ** ** ** * ***
consensus_11020#0 TGCTGTATATAATTTCTG-----CATGA--TCCCCTCTGCATTG-CAGAT-TACAGATAC 1370
consensus_11020#2 NGCTGGATATAATTNCTG-----CATGAATCCCCTTTTGCTTTG-CNGAT-TTCNGGTTC 686
consensus_11020#1 GACCTCCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTG 1457
* * * * *** ** * * ** * * ** * * *
consensus_11020#0 AA-----------AATACAC--TGAG-ATGATTCCGTGTTATAGATACAGGAACGGTGTG 1416
consensus_11020#2 CA-----------AATANCCCTTGGG-ATGANTTCCCGGGGTTAAAAAAAAAAAAAAAAA 734
consensus_11020#1 GACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAG 1517
* * * ** * ** * * * *
consensus_11020#0 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACGAGTTTTTTTTCCAAGTGAGGTTGCGG 1476
consensus_11020#2 AAAAAACG---------------------------------------------------- 742
consensus_11020#1 ATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAA 1577
*
consensus_11020#0 TACATATGCACCTCAGATGTAAGTAATTCTTACTTAGCATATAGATACGGTGCAGGGGAT 1536
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 TACCTGCGCAG------------------------------------------------- 1588
consensus_11020#0 GATCCGATCCCTGCTTAGCTTAGCTCATACGCTGTGCATTCAAAAGAAAAGACATTTCCT 1596
consensus_11020#2 ------------------------------------------------------------
consensus_11020#1 ------------------------------------------------------------
consensus_11020#0 TTTCCTATCAACTGATGCTCAGTCTGTATA 1626
consensus_11020#2 ------------------------------
consensus_11020#1 ------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||