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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11178#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1931 fasta sequence
[TCGTGCCCTCCTCTTCCTCCCACTCCTCCTCATCTGCCCTCTCGTCCACTCCACCGCTGCTCCCCGCTGCCGCCGCAGATGCCGCCCAAGGTGGTCGCCGTGGCCGCCGGCGAGGCCCACACGCTCGCCCTCACCGGTGACGGTGAGGTGTACTCGTGGGGACGGGGCATGTTCGGCCGCCTCGGGACCGGGCGCGAGGCCGACGAGCACGTGCCCACCGTGGTCGCCGCCGGCGGGAGGCCGCGGCCCAGGTTCGTGGCCGTCGCATCCGGCGCCTACCACAGCCTTGCGCTGGACGATGAAGGTTCGCTCTGGTCATGGGGTTACAACATCTATGGTCAGCTTGGCTACGGGGAAGAGAATTCTCTTTTCCCATGTTTGGTTGAGCGTTTTCAAGATTTGGGTTCACCTGAAACGCTGCAGTCTGAAGCACAGAACAGTAGCACACAGTCTTCATTGAAGTTGTCTTCTGTTAAAGCTGGGGGCATGATGTCATTTGCCATAGACACTCTGGGAGCTATGTGGATGTGGGGAAATTGCCCGCAGCAGACTGATGCTGGAGAGTTTTGTATAGCACCTAGCTGTGTCCCACTACCTGTGTGGGATTTCCATGGTCACACTGTTGTTAAGGTTGCCTGTGGTAATGAGCATGTCGTAGCTGCAGTCAGTGCTGGAGAGACCTATACAGGAGGTGACCTTGTTTGTTATGCCTGGGGCAATAACAACCATGGCCAGTTGGGTCTAGGTGACAAGGAAAGTAGATCCCGTCCTGTGCTTATCTCAGCTTTTAGCGAAGGATCTTCTTGGGAGGTGTATGAAATTGCCTGCGGAACTTGGCACACCGCTGTCCTTACCAATAAGAAGTCTTTCGACGTGGATCTTGAATCTCGTTGCTGGACGTTTGGCCTTGGTGATAATGGGCAGCTTGGCCATGGGACCACTGCCACCATTTGCTCTCCTCAACCTGTTGATGGCTTGCCAACTGGTTCCTTCCTTATTTCTCTTGATTGTGGATTGTTCCATACAACTGTAGTTTCTTCTGATGGAGAGGTTTGGTGCTGGGGAATGGAGAGAGGTCTTGGGTTGTGCCCTGATGCCAGCTTTTCAGGAGTTGATTCAGGGGATGCTCTACGCCCGATAAGAGTTCAGTCTCCTGAGACAAATGGGTTCAAATTTCTTGGTGCAGTGCAGGTCACTTGTGGAGCTGCTCACACTGTTCTTGTTGCTGGTGATGGGTATAGGATGTGGGCTTGGGGCAGAGGCCGCAGTGGTGTGCTTGGGAGAAACCAGACTGCTGACAGTTACATACCATGTGTTGTGATGTGGCCTCCTCTTGATGAGAACTTCCAAGAAATTCATGAGGATAGAGCACAGGCATCAACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCAGAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTTCACATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAATCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTGATGAACTCAATCGCCTGGAGATCTTCTACCGCAGCATGCTTTCTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACAAACCCCATGAGGTCAGTAAATTAGATGATTAATCACCAAATTGTAATTCCTGTTGTGCAGCATCTATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTGCCAGCTTGTTGTTTTATCAAAGTTAAATTATAATA-CAAAATAATCTAACCATTTTGGTAAACTTATCAGTTATGGTCACTCC]
[+] EMBL AK101326 [TCGTGCCCTCCTCTTCCTCCCACTCCTCCTCATCTGCCCTCTCGTCCACTCCACCGCTGCTCCCCGCTGCCGCCGCAGATGCCGCCCAAGGTGGTCGCCGTGGCCGCCGGCGAGGCCCACACGCTCGCCCTCACCGGTGACGGTGAGGTGTACTCGTGGGGACGGGGCATGTTCGGCCGCCTCGGGACCGGGCGCGAGGCCGACGAGCACGTGCCCACCGTGGTCGCCGCCGGCGGGAGGCCGCGGCCCAGGTTCGTGGCCGTCGCATCCGGCGCCTACCACAGCCTTGCGCTGGACGATGAAGGTTCGCTCTGGTCATGGGGTTACAACATCTATGGTCAGCTTGGCTACGGGGAAGAGAATTCTCTTTTCCCATGTTTGGTTGAGCGTTTTCAAGATTTGGGTTCACCTGAAACGCTGCAGTCTGAAGCACAGAACAGTAGCACACAGTCTTCATTGAAGTTGTCTTCTGTTAAAGCTGGGGGCATGATGTCATTTGCCATAGACACTCTGGGAGCTATGTGGATGTGGGGAAATTGCCCGCAGCAGACTGATGCTGGAGAGTTTTGTATAGCACCTAGCTGTGTCCCACTACCTGTGTGGGATTTCCATGGTCACACTGTTGTTAAGGTTGCCTGTGGTAATGAGCATGTCGTAGCTGCAGTCAGTGCTGGAGAGACCTATACAGGAGGTGACCTTGTTTGTTATGCCTGGGGCAATAACAACCATGGCCAGTTGGGTCTAGGTGACAAGGAAAGTAGATCCCGTCCTGTGCTTATCTCAGCTTTTAGCGAAGGATCTTCTTGGGAGGTGTATGAAATTGCCTGCGGAACTTGGCACACCGCTGTCCTTACCAATAAGAAGTCTTTCGACGTGGATCTTGAATCTCGTTGCTGGACGTTTGGCCTTGGTGATAATGGGCAGCTTGGCCATGGGACCACTGCCACCATTTGCTCTCCTCAACCTGTTGATGGCTTGCCAACTGGTTCCTTCCTTATTTCTCTTGATTGTGGATTGTTCCATACAACTGTAGTTTCTTCTGATGGAGAGGTTTGGTGCTGGGGAATGGAGAGAGGTCTTGGGTTGTGCCCTGATGCCAGCTTTTCAGGAGTTGATTCAGGGGATGCTCTACGCCCGATAAGAGTTCAGTCTCCTGAGACAAATGGGTTCAAATTTCTTGGTGCAGTGCAGGTCACTTGTGGAGCTGCTCACACTGTTCTTGTTGCTGGTGATGGGTATAGGATGTGGGCTTGGGGCAGAGGCCGCAGTGGTGTGCTTGGGAGAAACCAGACTGCTGACAGTTACATACCATGTGTTGTGATGTGGCCTCCTCTTGATGAGAACTTCCAAGAAATTCATGAGGATAGAGCACAGGCATCAACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCAGAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTTCACATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAATCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTGATGAACTCAATCGCCTGGAGATCTTCTACCGCAGCATGCTTTCTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACAAACCCCATGAGGTCAGTAAATTAGATGATTAATCACCAAATTGTAATTCCTGTTGTGCAGCATCTATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTGCCAGCTTGTTGTTTTATCAAAGTTAAATTATAATA CAAAATAATCTAACCATTTTGGTAAACTTATCAGTTATGGTCACTCC]
[+] EMBL CB650084 [ TCCCCGCTGCCGCCGCAGATGCCGCCCAAGGTGGTCGCCGTGGCCGCCGGCGAGGCCCACACGCTCGCCCTCACCGGTGACGGTGAGGTGTACTCGTGGGGACGGGGCATGTTCGGCCGCCTCGGGACCGGGCGCGAGGCCGACGAGCACGTGCCCACCGTGGTCGCCGCCGGCGGGAGGCCGCGGCCCAGGTTCGTGGCCGTCGCATCCGGCGCCTACCACAGCCTTGCGCTGGACGATGAAGGTTCGCTCTGGTCATGGGGTTACAACATCTATGGTCAGCTTGGCTACGGGGAAGAGAATTCTCTTTTCCCATGTTTGGTTGAGCGTTTTCAAGATTTGGGTTCACCTGAAACGCTGCAGTCTGAAGCACAGAACAGTAGCACACAGTCTTCATTGAAGTTGTCTTCTGTTAAAGCTGGGGGCATGATGTCATTTGCCATAGACACTCTGGGAGCTATGTGGATGTGGGGAAATTGCCCGCAGCAGACTGATGCTGGAGAGTTTTGTATAGCACCTAGCTGTGTCCCACTACCTGTGTGGGATTTCCATGGTCACACTGTTGTTAAGGTTGCCTGTGGTAATGAGCATGTCGTAGCTGCAGTCAGTGCTGGAGAGACCTATACAGGAGGTGACCTTGTTTGTTATGCCTGGGGCAATAACAACCATGGCCAGTTGGGTCTAGGTGACAAGGAAAGTAGATCCCGTCC ]
[-] EMBL CB650085 [ AGTTCAGTCTCCTGAGACAAATGGGTTCAAATTTCTTGGTGCAGTGCAGGTCACTTGTGGAGGTGCTCACACTGTTCTTGTTGCTGGTGATGGGTATAGGATGTGGGCTTGGGGCAGAGGCCGCAGTGGTGTGCTTGGGAGAAACCAGACTGCTGACAGTTACATACCATGTGTTGTGATGTGGCCTCCTCTTGATGAGAACTTCCAAGAAATTCATGAGGATAGAGCACAGGCATCAACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCAGAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTTCACATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAATCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTGATGAACTCAATCGCCTGGAGATCTTCTACCGCAGCATGCTTTCTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACAAACCCCATGAGGTCAGTAAATTAGATGATTAATCACCAAATTGTAATTCCTGTTGTGCAGCATGTATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTGCCAGCTTGTTGTTTTATCAAAGTTTAA AAGGATA CAAAATAATCTAcc ]
[+] EMBL BI802823 [ GGAGAAACCAGACTGCTGACAGTTACATACCATGTGTT TGATGTGGCCTCCTCTTGATGAGAACTTCCAAGAAATTCATGAGGATAGAGCACAGGCATCAACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAAC AAAGCTATCTGCTGCCTCAGAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTTCACATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAATCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTGATGAACTCAATCGCCTGGAGATCTTCTACCGCAGCATGCTTTCTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACAAACCCCATGAGGTCAGTAAATTAGATGATTAATCACCAAATTGTAATTCCTGTTGTGCAGCATCTATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTGCCAGCTTGTTGTTTTATCAAAGTTAAATTATAATACCAAAATAATCTAACCATTTTGGTAAACTTAaaaa ]
consensusID : consensus_11178#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 740 fasta sequence
[CGATAAGACCCTGTCTCCTGAGACAAATGGGTTCAAATTTCTTGGTGCAGTGCAGGTCACTTGTCGGAGCTGCTCACACTGTTCTTGTTGCTGGTGATGGGTATAGGATGTGGGCTTGGGGCAGAGGCCGCAGTGGTGTGCTTGGGAGAAACCAGACTGCTGACAGTTACATACCATGTGTTGTGATGTGGCCTCCTCTTGATGAGAACTTCCAAGAAATTCATGAGGATAGAGCACAGGCATCAACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCAGAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTTCACATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAATCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTGATGAACTCAATCGCCTGGAGATCTTCTACCGCAGCATGCTTTCTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACAAACCCCATGAGTTGTTCTGTACGTTCGAGACGATGGAGGAGAAGATGCGAGCAATGGCGAACCTACGGCACCGCGTCTTGCCTCCACAGCTGCTGCTCTAGTGGCCCAAGGAAGCATCATTCTGTCAGTTGTT]
[+] EMBL CB673121 [CGATAAGACCCTGTCTCCTGAGACAAATGGGTTCAAATTTCTTGGTGCAGTGCAGGTCACTTGTCGGAGCTGCTCACACTGTTCTTGTTGCTGGTGATGGGTATAGGATGTGGGCTTGGGGCAGAGGCCGCAGTGGTGTGCTTGGGAGAAACCAGACTGCTGACAGTTACATACCATGTGTTGTGATGTGGCCTCCTCTTGATGAGAACTTCCAAGAAATTCATGAGGATAGAGCACAGGCATCAACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCAGAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTTCACATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAATCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTGATGAACTCAATCGCCTGGAGATCTTCTACCGCAGCATGCTTTCTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACAAACCCCATGAGTTGTTCTGTACGTTCGAGACGATGGAGGAGAAGATGCGAGCAATGGCGAACCTACGGCACCGCGTCTTGCCTCCACAGCTGCTGCTCTAGTGGCCCAAGGAAGCATCATTCTGTCAGTTGTT]
consensusID : consensus_11178#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 699 fasta sequence
[TGGTGAGGGGTATAGGATTGGGGCTTGGGGCCAGGCCCCCAGTGGTGTGTTGGGGGAACCCAGCGTGCTG-CAGGTTACATACCATGTGTTGTGATGGGGCCTCCTCTTGATGAGAACTTCC-AAGAAATTCATGAGGATAGAGCNCAGGCATCAACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCAGAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTTCATATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAATCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTGATGAACTCAATCGCCTGGAGATCTTCTACCGCAGCATGCTTTTTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACAAACCCCATGAGGTCAGTAAATTAGATGATTAATCCCCAAATTGTAATTTCTGTTGTGCAGCATCTATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTGCCAGCTTGTTGTTTTATCAAAGTTAAATTATAATACAAAATAATCTAACCATTTTGGTAAA---A--A---AAAAAAAAAAAAAA]
[-] EMBL CA760132 [TGGTGAGGGGTATAGGATTGGGGCTTGGGGCCAGGCCCCCAGTGGTGTGTTGGGGGAACCCAGCGTGCTG CAGGTTACATACCATGTGTTGTGATGGGGCCTCCTCTTGATGAGAACTTCC AAGAAATTCATGAGGATAGAGCNCAGGCATCAACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCAGAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTTCATATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAATCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTGATGAACTCAATCGCCTGGAGATCTTCTACCGCAGCATGCTTTTTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACAAACCCCATGAGGTCAGTAAATTAGATGATTAATCCCCAAATTGTAATTTCTGTTGTGCAGCATCTATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTGCCAGCTTGTTGTTTTATCAAAGTTAAATTATAATACAAAATAATCTAACCATTTTGGTAAA A A AAAAAAAAAAAAAA]
[-] EMBL CA760131 [ cTTGGGAGAAACCAGACTGCTGACA GTTACATACCATGTGTTGTGATGTGGCCTCCTCTTGATGAGAACTTCCAAAGAAATTCATGAGGATAGAGCACAGGCATCAACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCAGAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTTCACATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAATCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATGCAGCAGGTACTGATGAACTCAATCGCCTGGAGATCTTCTACCGCAGCATGCTTTTTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACAAACCCCATGAGGTCAGTAAATTAGATGATTAATCACCAAATTGTAATTCCTGTTGTGCAGCATCTATCAAATTTCGTGCATTAAAATTGTAATAAGCTCTGATGCTGCCAGCTTGTTGTTTTATCAAAGTTAAATTATAATACAAAATAATCTAACCATTTTGGTAAACTTATCAGTTAAAAAAAAAAAAA ]
consensusID : consensus_11178#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 540 fasta sequence
[CGGNGGTNTAATTGGGGGGCCNGGAGCTGGATTGAACAAACTTTCCCCCCTANGAGNNCGGNTTTTNTGGTCCAANCNGANAATTGGGGGGNGAGCCCAANAANTTAAACTTTCAATATTTNGAAAACTTNAAGAGGANGAANACTTCAACTTCCCTTTCAGGATTTCCTNTTCTNGGATATAAGAAGGGAATTGGAGAATTTNTGGGANACAGCAGGTACNGGANGAANTCATTCGCNTGGAGATNTTCTACCCGCAGCATGCTTTCTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACANACCCCATGAGGTCAGTAAATTAGATGATTAATCACCAAATTGTAATTCCTGTTGTGCAGCATCTATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTGCCAGCTTGTTGTTTTATCAAAGTTAAATTATAATACAAAATAATCTAACCATTTTGGTAAACTTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AA753593 [CGGNGGTNTAATTGGGGGGCCNGGAGCTGGATTGAACAAACTTTCCCCCCTANGAGNNCGGNTTTTNTGGTCCAANCNGANAATTGGGGGGNGAGCCCAANAANTTAAACTTTCAATATTTNGAAAACTTNAAGAGGANGAANACTTCAACTTCCCTTTCAGGATTTCCTNTTCTNGGATATAAGAAGGGAATTGGAGAATTTNTGGGANACAGCAGGTACNGGANGAANTCATTCGCNTGGAGATNTTCTACCCGCAGCATGCTTTCTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACANACCCCATGAGGTCAGTAAATTAGATGATTAATCACCAAATTGTAATTCCTGTTGTGCAGCATCTATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTGCCAGCTTGTTGTTTTATCAAAGTTAAATTATAATACAAAATAATCTAACCATTTTGGTAAACTTAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 TCGTGCCCTCCTCTTCCTCCCACTCCTCCTCATCTGCCCTCTCGTCCACTCCACCGCTGC 60
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 TCCCCGCTGCCGCCGCAGATGCCGCCCAAGGTGGTCGCCGTGGCCGCCGGCGAGGCCCAC 120
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 ACGCTCGCCCTCACCGGTGACGGTGAGGTGTACTCGTGGGGACGGGGCATGTTCGGCCGC 180
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 CTCGGGACCGGGCGCGAGGCCGACGAGCACGTGCCCACCGTGGTCGCCGCCGGCGGGAGG 240
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 CCGCGGCCCAGGTTCGTGGCCGTCGCATCCGGCGCCTACCACAGCCTTGCGCTGGACGAT 300
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 GAAGGTTCGCTCTGGTCATGGGGTTACAACATCTATGGTCAGCTTGGCTACGGGGAAGAG 360
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 AATTCTCTTTTCCCATGTTTGGTTGAGCGTTTTCAAGATTTGGGTTCACCTGAAACGCTG 420
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 CAGTCTGAAGCACAGAACAGTAGCACACAGTCTTCATTGAAGTTGTCTTCTGTTAAAGCT 480
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 GGGGGCATGATGTCATTTGCCATAGACACTCTGGGAGCTATGTGGATGTGGGGAAATTGC 540
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 CCGCAGCAGACTGATGCTGGAGAGTTTTGTATAGCACCTAGCTGTGTCCCACTACCTGTG 600
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 TGGGATTTCCATGGTCACACTGTTGTTAAGGTTGCCTGTGGTAATGAGCATGTCGTAGCT 660
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 GCAGTCAGTGCTGGAGAGACCTATACAGGAGGTGACCTTGTTTGTTATGCCTGGGGCAAT 720
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 AACAACCATGGCCAGTTGGGTCTAGGTGACAAGGAAAGTAGATCCCGTCCTGTGCTTATC 780
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 TCAGCTTTTAGCGAAGGATCTTCTTGGGAGGTGTATGAAATTGCCTGCGGAACTTGGCAC 840
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 ACCGCTGTCCTTACCAATAAGAAGTCTTTCGACGTGGATCTTGAATCTCGTTGCTGGACG 900
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 TTTGGCCTTGGTGATAATGGGCAGCTTGGCCATGGGACCACTGCCACCATTTGCTCTCCT 960
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 CAACCTGTTGATGGCTTGCCAACTGGTTCCTTCCTTATTTCTCTTGATTGTGGATTGTTC 1020
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 CATACAACTGTAGTTTCTTCTGATGGAGAGGTTTGGTGCTGGGGAATGGAGAGAGGTCTT 1080
consensus_11178#1 ------------------------------------------------------------
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 GGGTTGTGCCCTGATGCCAGCTTTTCAGGAGTTGATTCAGGGGATGCTCTACGCCCGATA 1140
consensus_11178#1 -------------------------------------------------------CGATA 5
consensus_11178#2 ------------------------------------------------------------
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 AGAGTTCAGTCTCCTGAGACAAATGGGTTCAAATTTCTTGGTGCAGTGCAGGTCACTTGT 1200
consensus_11178#1 AGACCCTGTCTCCTGAGACAAATGGGTTCAAATTTCTTGGTGCAGTGCAGGTCACTTGTC 65
consensus_11178#2 --------------------------TGGTGAGGGGTATAGGATTGGGGCTTGGGGCCAG 34
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 GGAGCTGCTCACACTGTTCTTGTTGCTGGTGATGGGTATAGGATGTGGGCTTGGGGCAGA 1260
consensus_11178#1 GGAGCTGCTCACACTGTTCTTGTTGCTGGTGATGGGTATAGGATGTGGGCTTGGGGCAGA 125
consensus_11178#2 GCCCCCAGTGGTGTG-TTGGGGGAACCCAGCGTGCTGCAGGTTACATACCATGTGTTGTG 93
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 GGCCGCAGTGGTGTGCTTGGGAGAAACCAGACTGCTGACAGTTACATACCATGTGTTGTG 1320
consensus_11178#1 GGCCGCAGTGGTGTGCTTGGGAGAAACCAGACTGCTGACAGTTACATACCATGTGTTGTG 185
consensus_11178#2 ATGGGGCCTCCTCTTGATGAGAACTTCCAAGAAATTCATGAGGATAGAGCNCAGGCATCA 153
consensus_11178#3 ------------------------------------------------------------
consensus_11178#0 ATGTGGCCTCCTCTTGATGAGAACTTCCAAGAAATTCATGAGGATAGAGCACAGGCATCA 1380
consensus_11178#1 ATGTGGCCTCCTCTTGATGAGAACTTCCAAGAAATTCATGAGGATAGAGCACAGGCATCA 245
consensus_11178#2 ACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCA 213
consensus_11178#3 ----CGGNGGTN--TAATTGGGG-GGCCNGGAGCTGGATTGAACAA-ACTTTCCCCCCTA 52
consensus_11178#0 ACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCA 1440
consensus_11178#1 ACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCA 305
*** ** * * ** ** *** **** ** * * * ** *
consensus_11178#2 GAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTT 273
consensus_11178#3 NGAGNNC---GGNTTTTNTGGTCCAANCNGANAATTGGGGGGNGA---GCCCAANAANTT 106
consensus_11178#0 GAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTT 1500
consensus_11178#1 GAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTT 365
** * * ** * **** ** * ** * ** ** * ** *** * * **
consensus_11178#2 CATATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAA 333
consensus_11178#3 AAACTTTCAATATTTNGAAAACTTNAAGA-GGANGAANACTTCAACTTCCCTTTCAGGAT 165
consensus_11178#0 CACATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAA 1560
consensus_11178#1 CACATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAA 425
* *********** * **** * *** * * *** ***** ** * ** **** **
consensus_11178#2 TCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTG-A 392
consensus_11178#3 TTCCTNTTCTNGGATATAAGAAGGGAATTGGAGAATTTNTGGGANACAGCAGGTACNGGA 225
consensus_11178#0 TCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTG-A 1619
consensus_11178#1 TCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTG-A 484
* * *** ***** **** ****** ***** * * *** *********** * *
consensus_11178#2 TGAACTCAATCGCCTGGAGATCTTCTACC-GCAGCATGCTTTTTGGTGTGAAGGATAAGC 451
consensus_11178#3 NGAANTCATTCGCNTGGAGATNTTCTACCCGCAGCATGCTTTCTGGTGTGAAGGATAAGC 285
consensus_11178#0 TGAACTCAATCGCCTGGAGATCTTCTACC-GCAGCATGCTTTCTGGTGTGAAGGATAAGC 1678
consensus_11178#1 TGAACTCAATCGCCTGGAGATCTTCTACC-GCAGCATGCTTTCTGGTGTGAAGGATAAGC 543
*** *** **** ******* ******* ************ *****************
consensus_11178#2 TTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGA 511
consensus_11178#3 TTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGA 345
consensus_11178#0 TTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGA 1738
consensus_11178#1 TTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGA 603
************************************************************
consensus_11178#2 GACAAACCCCATGAGGT---CAGTAAATT--AGATGATTAATCCCCAAATT---GTAATT 563
consensus_11178#3 GACANACCCCATGAGGT---CAGTAAATT--AGATGATTAATCACCAAATT---GTAATT 397
consensus_11178#0 GACAAACCCCATGAGGT---CAGTAAATT--AGATGATTAATCACCAAATT---GTAATT 1790
consensus_11178#1 GACAAACCCCATGAGTTGTTCTGTACGTTCGAGACGATGGAGGAGAAGATGCGAGCAATG 663
**** ********** * * *** ** *** *** * * ** * ***
consensus_11178#2 TCTGTTGTGCAGCATC-TATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTG 622
consensus_11178#3 CCTGTTGTGCAGCATC-TATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTG 456
consensus_11178#0 CCTGTTGTGCAGCATC-TATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTG 1849
consensus_11178#1 GCGAACCTACGGCACCGCGTCTTGCCTCCACAGCTGCTGCTCTAGTGGCCCAAGGAAGCA 723
* * * *** * ** * * * ** * * *
consensus_11178#2 CCAGCTTGTTGTTTTATCAAAGTTAAATTATAATACAAAATAATCTAACCATTTTGGTAA 682
consensus_11178#3 CCAGCTTGTTGTTTTATCAAAGTTAAATTATAATACAAAATAATCTAACCATTTTGGTAA 516
consensus_11178#0 CCAGCTTGTTGTTTTATCAAAGTTAAATTATAATACAAAATAATCTAACCATTTTGGTAA 1909
consensus_11178#1 TCATTCTGTCAGTTGTT------------------------------------------- 740
** *** ** *
consensus_11178#2 A---AAAAAAAAAAAAAAAA---- 699
consensus_11178#3 ACTTAAAAAAAAAAAAAAAAAAAA 540
consensus_11178#0 ACTTATCAGTTATGGTCACTCC-- 1931
consensus_11178#1 ------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||