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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11203#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2924 fasta sequence
[TCTTCTCTTCTCATCGACCCCTCCGCCTCCTCTCCTCTCCTTTCCATTTTTTCCCCATCGCGCCCTACTTAACCACGCGACGCCAAAAAAAGAAAAAGAGGAGAGAGCAAAACAAAGCGAAGGCTCCATTCATTCACTCCATCTCCTCGCGTCCCCTCCCCGCTCCCCCCGCCGCAATCCGCATTCGCTAGGGGTTGGGTTGGGAGATGGCGTCGGCGGCGGCGGCGGCGGCGACGGCGAGGGGGCCGCGGTACGCGCCGCCAGATCCGACGCTGCCCAAGCCGTGGAGGGGGCTCATCGACGGCAACACCGGGTACCTCTACTTCTGGAACCCGGAGACCAAGGCCGTGCAGTACGACCGCCCCACGGCGCCGCCGCCCTCCTCCCCCCCGGCGCAGCAGCCTCCGGAGAGGCCTAGGAACAGCGATCCTGCTGAGTCGCAGGCGCAGGCTGGAGCGAGCCGAACGCAGAATGCTGCTCCTGCTGATGATAGGGCAAGGAATGATCATTTGAATGATCATTTCGAGCGGCGCACGGAAGCGGCGGGAAGTCATGCGCAGAACGTGCCTTTCACTGAGCAAAATACTAGGAGCAACCCTTCTTCGCAGCCGTGCTCTGCAGCTGGAGTATACCCTGCACAGAATGTATTTTCAGAGGCTGCCAGTGGAGACCGCACCTCACCAGAAGCGTATCGTGCTAAGCACGAGATCACTATTGTCGGAAATGAGGCTCCAGCTCCATTCATGACATTTCAGTCCACAGGTTTCCCTCCAGAGATTCTAAGGGAGGTAAGTGCACACAATTTACATGACTATTTAATGCATTTTCTTGTATCCTTCTCGAAAGAAATTAGGAGGTCATTGTGCGTTCATACTACGTATGTGATAACTACGCTGGATGTTCATCTCAGCAGGCTCTTCAAGTCAACAATCTATGTCAAGGTACAGCAAGCGGGATTCTCTGCACCAACTCCTATCCAAGCTCAATCATGGCCAATTGCTCTTAGGAATCGTGATATTGTAGCTGTGGCGAAGACAGGTTCCGGAAAAACACTGGGTTATCTCATTCCAGGGTTTATCCTTCTTAAGCGCCTTCAACATAATTCAAGGGATGGTCCAACGGTATTAGTGCTTTCTCCAACAAGGGAATTGGCAACACAAATCCAAGATGAAGCGAAAAAGTTTGGGAGATCGTCAAGAATATCGTCTGTTTGTTTATATGGAGGTGCTCCTAAAGGTCCTCAGCTAAGAGATCTAGAGCGTGGTGCAGACATTGTGGTTGCAACTCCTGGAAGATTGAATGACATTTTAGAAATGCGAAGAGTGAGCCTACATCAAGTATCTTATCTTGTTCTTGATGAGGCTGACCGCATGCTTGATATGGGTTTTGAGCCACAAATAAGAAAAATTGTGAAACAAGTACAACCCAAACGACAGACTCTTATGTTCACTGCCACTTGGCCAAAAGAGGTGAGGAAAATAGCCTCAGATTTGCTGTCCAATCCAGTCCAAGTTAACATTGGGAACACTGATCAACTGGTTGCCAATAAGTCAATCACTCAGTATGTGGATGTTATCACACCTCCGGAGAAATCGAGGCGGCTTGATCAAATCCTAAGGTCACAGGAACCTGGATCGAAAATCATAATATTTTGCTCCACAAAGAGGATGTGTGATCAGCTGGCTCGAAACCTAGCACGGCAGTATGGTGCTTCTGCTATTCATGGTGATAAATCACAAGCCGAGAGGGATTCTGTGTTGAGTGAATTTCGAAGTGGCAGATGCCCTATTCTTGTTGCTACTGATGTGGCTGCCCGAGGCTTGGACATAAAGGATATCAGAGTTGTGGTCAACTACGATTTCCCAACAGGTGTTGAGGATTACGTCCATAGAATTGGGAGAACAGGACGGGCTGGAGCGACTGGAGTTGCCTATACATTCTTCTGTGATCAGGATTCAAAGTATGCTTCAGATCTCGTGAAGATTTTGGAGGGTGCAAACCAGTCTGTTTCGCAACAGTTGAGAGATATGGTCTCCCGTGGAGGGTATGGTGGAAGGTCACGGCGCTGGGCATCTTCAGATGACTCTTATGGTGGTCGAGGATATGATTCAGGCTATACTTCAAGGTCGACTGACAACTATAACAGTGGTTATGG-CAGT-CAGTCTGGGAATGGTTCTAGCTTTC-ATAGTAGCTTCCATAACAGCAACAGTGGC-AATCAGTTTGGCGATACTTCTGGCTTCCAAACCAGCTTTCATA-ACAGCAGCAGCAACAATCAAACCAGTGACAATCCAAGCTTTCATGCCAGCAGCAACAACGATCAACCTGGTGATGGTCT-CAGCTTTCATGCCAGGTTCTATAGCTCTTCTCGAGGCAGCGATCAGAGCAGAACA-AACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCA-ATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGCATCATGATGGTGACGAACAGAGTAGATGAAGCTGTTCTCTTACCAAACTATACTATCGTGCGTGCTCCCCCTGAAGCAAA--AGTGTGTCCCAGAACTTAACTAACATAGGATAAGA--CTGTGGATCTTCTGCTGTGCAGATGTAGCGCA-CTTGATAATGTATGTCTGGTGTTAGTCGTTTGTC-AGACCTGGGGGCTCGGACTTCCTTGCTATCTATACCTGCTACCGCTATGATCATGTGGAAACAAACCATCTGAGGCATGCATTTTGGACGAAAACATGCACTCTTAATCCTTATATGACTTGTAGATTATTTACCCCAGCGTCGTTTACATTGAACTATTTCCATGTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTCTCTCTCTCTCT]
[+] EMBL AK100326 [TCTTCTCTTCTCATCGACCCCTCCGCCTCCTCTCCTCTCCTTTCCATTTTTTCCCCATCGCGCCCTACTTAACCACGCGACGCCAAAAAAAGAAAAAGAGGAGAGAGCAAAACAAAGCGAAGGCTCCATTCATTCACTCCATCTCCTCGCGTCCCCTCCCCGCTCCCCCCGCCGCAATCCGCATTCGCTAGGGGTTGGGTTGGGAGATGGCGTCGGCGGCGGCGGCGGCGGCGACGGCGAGGGGGCCGCGGTACGCGCCGCCAGATCCGACGCTGCCCAAGCCGTGGAGGGGGCTCATCGACGGCAACACCGGGTACCTCTACTTCTGGAACCCGGAGACCAAGGCCGTGCAGTACGACCGCCCCACGGCGCCGCCGCCCTCCTCCCCCCCGGCGCAGCAGCCTCCGGAGAGGCCTAGGAACAGCGATCCTGCTGAGTCGCAGGCGCAGGCTGGAGCGAGCCGAACGCAGAATGCTGCTCCTGCTGATGATAGGGCAAGGAATGATCATTTGAATGATCATTTCGAGCGGCGCACGGAAGCGGCGGGAAGTCATGCGCAGAACGTGCCTTTCACTGAGCAAAATACTAGGAGCAACCCTTCTTCGCAGCCGTGCTCTGCAGCTGGAGTATACCCTGCACAGAATGTATTTTCAGAGGCTGCCAGTGGAGACCGCACCTCACCAGAAGCGTATCGTGCTAAGCACGAGATCACTATTGTCGGAAATGAGGCTCCAGCTCCATTCATGACATTTCAGTCCACAGGTTTCCCTCCAGAGATTCTAAGGGAGGTAAGTGCACACAATTTACATGACTATTTAATGCATTTTCTTGTATCCTTCTCGAAAGAAATTAGGAGGTCATTGTGCGTTCATACTACGTATGTGATAACTACGCTGGATGTTCATCTCAGCAGGCTCTTCAAGTCAACAATCTATGTCAAGGTACAGCAAGCGGGATTCTCTGCACCAACTCCTATCCAAGCTCAATCATGGCCAATTGCTCTTAGGAATCGTGATATTGTAGCTGTGGCGAAGACAGGTTCCGGAAAAACACTGGGTTATCTCATTCCAGGGTTTATCCTTCTTAAGCGCCTTCAACATAATTCAAGGGATGGTCCAACGGTATTAGTGCTTTCTCCAACAAGGGAATTGGCAACACAAATCCAAGATGAAGCGAAAAAGTTTGGGAGATCGTCAAGAATATCGTCTGTTTGTTTATATGGAGGTGCTCCTAAAGGTCCTCAGCTAAGAGATCTAGAGCGTGGTGCAGACATTGTGGTTGCAACTCCTGGAAGATTGAATGACATTTTAGAAATGCGAAGAGTGAGCCTACATCAAGTATCTTATCTTGTTCTTGATGAGGCTGACCGCATGCTTGATATGGGTTTTGAGCCACAAATAAGAAAAATTGTGAAACAAGTACAACCCAAACGACAGACTCTTATGTTCACTGCCACTTGGCCAAAAGAGGTGAGGAAAATAGCCTCAGATTTGCTGTCCAATCCAGTCCAAGTTAACATTGGGAACACTGATCAACTGGTTGCCAATAAGTCAATCACTCAGTATGTGGATGTTATCACACCTCCGGAGAAATCGAGGCGGCTTGATCAAATCCTAAGGTCACAGGAACCTGGATCGAAAATCATAATATTTTGCTCCACAAAGAGGATGTGTGATCAGCTGGCTCGAAACCTAGCACGGCAGTATGGTGCTTCTGCTATTCATGGTGATAAATCACAAGCCGAGAGGGATTCTGTGTTGAGTGAATTTCGAAGTGGCAGATGCCCTATTCTTGTTGCTACTGATGTGGCTGCCCGAGGCTTGGACATAAAGGATATCAGAGTTGTGGTCAACTACGATTTCCCAACAGGTGTTGAGGATTACGTCCATAGAATTGGGAGAACAGGACGGGCTGGAGCGACTGGAGTTGCCTATACATTCTTCTGTGATCAGGATTCAAAGTATGCTTCAGATCTCGTGAAGATTTTGGAGGGTGCAAACCAGTCTGTTTCGCAACAGTTGAGAGATATGGTCTCCCGTGGAGGGTATGGTGGAAGGTCACGGCGCTGGGCATCTTCAGATGACTCTTATGGTGGTCGAGGATATGATTCAGGCTATACTTCAAGGTCGACTGACAACTATAACAGTGGTTATGG CAGT CAGTCTGGGAATGGTTCTAGCTTTC ATAGTAGCTTCCATAACAGCAACAGTGGC AATCAGTTTGGCGATACTTCTGGCTTCCAAACCAGCTTTCATA ACAGCAGCAGCAACAATCAAACCAGTGACAATCCAAGCTTTCATGCCAGCAGCAACAACGATCAACCTGGTGATGGTCT CAGCTTTCATGCCAGGTTCTATAGCTCTTCTCGAGGCAGCGATCAGAGCAGAACA AACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCA ATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGCATCATGATGGTGACGAACAGAGTAGATGAAGCTGTTCTCTTACCAAACTATACTATCGTGCGTGCTCCCCCTGAAGCAAA AGTGTGTCCCAGAACTTAACTAACATAGGATAAGA CTGTGGATCTTCTGCTGTGCAGATGTAGCGCA CTTGATAATGTATGTCTGGTGTTAGTCGTTTGTC AGACCTGGGGGCTCGGACTTCCTTGCTATCTATACCTGCTACCGCTATGATCATGTGGAAACAAACCATCTGAGGCATGCATTTTGGACGAAAACATGCACTCTTAATCCTTATATGACTTGTAGATTATTTACCCCAGCGTCGTTTACATTG ]
[-] EMBL CB677828 [ ATATGGTCTCCCGTGGAGGGTATGGTGGAAGGTCACGGCGCTGGGCATCTTCAGATGACTCTTATGGTGGTCGAGGATATGATTCAGGCTATACTTCAAGGTCGACTGACAACTATAACAGTGGTTATGG CAGT CAGTCTGGGAATGGTTCTAGCTTTC ATAGTAGCTTCCATAACAGCAACAGTGGC AATCAGTTTGGCGATACTTCTGGCTTCCAAACCAGCTTTCATA ACAGCAGCAGCAACAATCAAACCAGTGACAATCCAAGCTTTCATGCCAGCAGCAACAACGATCAACCTGGTGATGGTCT CAGCTTTCATGCCAGGTTCTATAGCTCTTCTCGAGGCAGCGATCAGAGCAGAACA AACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCA ATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGCATCATGATGGTGACGAACAGAGTAGATGAAGCTGTTCTCTTACCAAACTATACTATCGTGCGTGCTCCCCCTGAAGCAAA AGTGTGTCCCAGAACTTAACTAACATAGGATAAGA CTGTGGATCTTCTGCTGTGCAGATGTAGCGCA CTTGATAATGTATGTCTGGTGTTAGTCGTTTGTC AGACCTGGGGGCTCGGACTTCCTTGCTATCTATACCTGCTACCGCTATGATCATGTGGAAACAAACCATCTGAGGCATGCATTTTGGACGAAAACAAGCACTCTTAATCCTTATATGACTTGTAGATTATT ]
[+] EMBL AU108603 [ TATAACAGTGGTTATGGCCAGTCCAGTNTGGGAATGGTTCTAGCTTTCAATAGTAGCTTCCATAACAGCAACAGTGGCAAATCAGTTTGGCGATACTTCTGGCTTCCAAACCAGCTTTCATACANAGCAGCAGCAACAATCANACCAGTGACAACCCAAGNTTTCATGC CAGCAACAACGATCANCCTGGTGATGGTCTCCAGCTTTCATGCCAGGTTCTATAGCTCTTCTCGAGGCAGCGATCAGAGCAGAACA AACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCA ATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCNCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGCATCATGATGGTGACGAACAGAGTAGATGAAGCTGTTCTCTTACCAAACTATACTATCGTGCGTGCTCCCCCTGAAGCAAA AGTGTGTCCCAGAACTTAACTAACATAGGATAAGA CTGTGGATCTTCTGCTGTGCAGATGTAGCGCA CTTGATAATGTATGTCTGGTGTTAGTCGTTTGTC AGACCTGGGGGCTCGGACTTCCTTGCTATCTATACCTGCTACCGCTATGATCATGTGGAAACAAACCATCTGAGGCATGCATTTTGGACGAAAAaaaa ]
[+] EMBL BM037681 [ GGCGATACTTCTGGCTTCC AACCAGCTTTCATA ACAGCAGCAGC ACAATCGAACCAGTGACCATCCAAGCTTTCATGCCAGAAGCAACNACGATCAACCTGGTGATGGTCT CAGCTTTCATGCCAGGTTCTATAGCTCTTCTCGA GCAGCGATCAGAGCAGAACACAACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCANATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGCATCATGATGGTGACGAACAGAGTAGATGAAGCTGTTCTCTTACCCAACTATACTATCGTGCGTGCTCCCCCTGAAGCAAAACAGTGTGTCCCAGAACTTAACTAACATAGGATAAGACTCTGTGGATCTTCTGCTGTGCAGATGTAGCGCACCTTGATAATGTATGTCTGGTGTTAGTCGTTTGTC AGACTTGGGGGCTCGGACTTCCTTGCTATCTATACCTGCTACCGCTATGATCATGTGGAAACAAACCATCTGAGGCATGCATTTTGGACGAAAGCATGCACTCTTAATCCTTATATGACTTGTAGATTAaacaaaa ]
[+] EMBL BE530976 [ TTNTATAGCTCTTCTCGAGGCAGCGATCANAGCAGAACA AACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCA ATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGCATCATGATGGTGACGAACAGAGTAGATGAAGCTGTTCTCTTACCAAACTATACTATCGTGCGTGCTCCCCCTGAAGCAAAACAGTGTGTCCCAGAACTTAACTAACATAGGATAAGACTCTGTGGATCTTCTGCTGTGCAGATGTAGCGCA CTTGATAATGTATGTCTGGTGTTAGTCGTTTGTCAAGACTTGGGGGCTCGGACTTCCTTGCTATCTATACCTGCTACCGCTATGATCATGTGGAAACAAACCATCTGAGGCATGCATTTTGGACGAAAGCATGCACTCTTAATCCTTATATGACTTGNAGATTATTTACCCCAGCGTCGTTTACA ]
[-] EMBL CF325814 [ AGAGCAGAACA AACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCA ATTGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGCATCATGATGGTGACGAACAGAGTAGATGAAGCTGTTTTTTTACCAAACTATACTATCGTGCGTGCTCCCCCTGAAGCAAA AGTGTGTCCCAGAACTTAACTAACATAGGATAAGA CTGTGGATTTTTTGCTGTGCAGATGTAGCGCA CTTGATAAAGTATGTCTGGTGTTAGTCGTTTGTC AGACCTGGGGGCTCGGACTTCCTTGCTATTTATACCTGCTACCGCTATGATCATGTGGAAACAAACCATTTGAGGCATGCATTTTGGACGAAAACAAGCAATTTTAATCCTTATATGACTTGTAGATTATTTACCCCAGGGTCGTTTACATTGAACTATTTCCATGTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTCTCTCTCTCTCT]
consensusID : consensus_11203#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[ACAGTGGTTATGGCAGTCAGTTTGGGAATGGTTTTAGCTTTCATAGTAGTTTCCATAACAGCAACAGTGGCAATCAGTTTGGCGATACTTCTGGCTTCCAAACCAGCTTTCATAACAGCAGCAGCAACAATCAAACCAGTGACAATCCAAGCTTTCATGCCAGCAGCAACAACGATCAACCTGGTGATGGTCTCAGCTTTCATGCCAGGTTCTATAGCTCTTCTCGAGGCAGCGATCAGAGCAGAACAAACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCAATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGCATCATGATGGTGACGAACAGAGTAGATGAAGCTGTTCTCTTACCAAATTATANTATGGTGCAACCTTACCACACCCAAAACCCCCAACCCCAAATCAGATCAAAAAAAAAAAAACAAAAAACGCGACCACGCAATGCAATCGCGAGCAAACGAGCACCACCGAACCGATTAGCTCGTGATGCTCGTCGGTACGGGGGGGATTGGGGAGGAGGACGCGAACCCTAGCGAATGCGGATTGCGGCGGGGGGAGCGGGGAGGGGACGCGAGGAGATGGAGTGAATGAATGG]
[-] EMBL CB677827 [ACAGTGGTTATGGCAGTCAGTTTGGGAATGGTTTTAGCTTTCATAGTAGTTTCCATAACAGCAACAGTGGCAATCAGTTTGGCGATACTTCTGGCTTCCAAACCAGCTTTCATAACAGCAGCAGCAACAATCAAACCAGTGACAATCCAAGCTTTCATGCCAGCAGCAACAACGATCAACCTGGTGATGGTCTCAGCTTTCATGCCAGGTTCTATAGCTCTTCTCGAGGCAGCGATCAGAGCAGAACAAACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCAATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGCATCATGATGGTGACGAACAGAGTAGATGAAGCTGTTCTCTTACCAAATTATANTATGGTGCAACCTTACCACACCCAAAACCCCCAACCCCAAATCAGATCAAAAAAAAAAAAACAAAAAACGCGACCACGCAATGCAATCGCGAGCAAACGAGCACCACCGAACCGATTAGCTCGTGATGCTCGTCGGTACGGGGGGGATTGGGGAGGAGGACGCGAACCCTAGCGAATGCGGATTGCGGCGGGGGGAGCGGGGAGGGGACGCGAGGAGATGGAGTGAATGAATGG]
consensusID : consensus_11203#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 432 fasta sequence
[AGCANAGCATCACTATTGTCGGAAATNAGGCTCCAGCTCCATTCATGACATTTCAGTCCACAGGTTTCCCTCCAGAGATTCTAAGGGAGGTACAGCAAGCGGGATTCTCTGCACCAACTCCTATCCAAGCTCAATCATGGCCAATTGCTCTTAGGAATCGTGATATTGTAGCTGTGGCGAAGACAGGTTCCGGAAAAACACTGGGTTATCTCATTCCAGGGTTTATCCTTCTTAAGCGCCTTCAACATAATTCAAGGGATGGTCCAACGGTATTAGTGCTTTCTCCAACAAGGGAATTGGCAACACAAATCCAAGATGAAGCGAAAAAGTTTGGGAGATCGTCAAGAATATCGTCTGTTTGTTTATATGGAGGTGCTCCTAAAGGTCCTCAGCTAAGAGATCTAGAGCGTGGTNCAGNCATTGTGGTTGCAA]
[+] EMBL C26607 [AGCANAGCATCACTATTGTCGGAAATNAGGCTCCAGCTCCATTCATGACATTTCAGTCCACAGGTTTCCCTCCAGAGATTCTAAGGGAGGTACAGCAAGCGGGATTCTCTGCACCAACTCCTATCCAAGCTCAATCATGGCCAATTGCTCTTAGGAATCGTGATATTGTAGCTGTGGCGAAGACAGGTTCCGGAAAAACACTGGGTTATCTCATTCCAGGGTTTATCCTTCTTAAGCGCCTTCAACATAATTCAAGGGATGGTCCAACGGTATTAGTGCTTTCTCCAACAAGGGAATTGGCAACACAAATCCAAGATGAAGCGAAAAAGTTTGGGAGATCGTCAAGAATATCGTCTGTTTGTTTATATGGAGGTGCTCCTAAAGGTCCTCAGCTAAGAGATCTAGAGCGTGGTNCAGNCATTGTGGTTGCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11203#0 TCTTCTCTTCTCATCGACCCCTCCGCCTCCTCTCCTCTCCTTTCCATTTTTTCCCCATCG 60
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 CGCCCTACTTAACCACGCGACGCCAAAAAAAGAAAAAGAGGAGAGAGCAAAACAAAGCGA 120
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 AGGCTCCATTCATTCACTCCATCTCCTCGCGTCCCCTCCCCGCTCCCCCCGCCGCAATCC 180
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GCATTCGCTAGGGGTTGGGTTGGGAGATGGCGTCGGCGGCGGCGGCGGCGGCGACGGCGA 240
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GGGGGCCGCGGTACGCGCCGCCAGATCCGACGCTGCCCAAGCCGTGGAGGGGGCTCATCG 300
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 ACGGCAACACCGGGTACCTCTACTTCTGGAACCCGGAGACCAAGGCCGTGCAGTACGACC 360
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GCCCCACGGCGCCGCCGCCCTCCTCCCCCCCGGCGCAGCAGCCTCCGGAGAGGCCTAGGA 420
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 ACAGCGATCCTGCTGAGTCGCAGGCGCAGGCTGGAGCGAGCCGAACGCAGAATGCTGCTC 480
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 CTGCTGATGATAGGGCAAGGAATGATCATTTGAATGATCATTTCGAGCGGCGCACGGAAG 540
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 CGGCGGGAAGTCATGCGCAGAACGTGCCTTTCACTGAGCAAAATACTAGGAGCAACCCTT 600
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 CTTCGCAGCCGTGCTCTGCAGCTGGAGTATACCCTGCACAGAATGTATTTTCAGAGGCTG 660
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 CCAGTGGAGACCGCACCTCACCAGAAGCGTATCGTGCTAAGCACGAGATCACTATTGTCG 720
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GAAATGAGGCTCCAGCTCCATTCATGACATTTCAGTCCACAGGTTTCCCTCCAGAGATTC 780
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 TAAGGGAGGTAAGTGCACACAATTTACATGACTATTTAATGCATTTTCTTGTATCCTTCT 840
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 --------------------------------------------ACAGTGGTTATGGCAG 16
consensus_11203#0 CGAAAGAAATTAGGAGGTCA-TTGTGCGTTCATACTACGTATGTGATAACTACGCTGGA- 898
consensus_11203#2 --------AGCANAGCATCA-CTATTGTCGGAAATNAGGCTCCAGCT--CCATTCATGA- 48
consensus_11203#1 TCAGTTTGGGAATGGTTTTAGCTTTCATAGTAGTTTCCATAACAGCA--ACAGTGGCAAT 74
* * * * * * * * *
consensus_11203#0 TGTTCATCT----CAGCAGGCTCTTCAAGTCAACAATCTATGTCAAGGTA-CAGCAAGCG 953
consensus_11203#2 CATTTCAGT----CCACAGGTTTCCCT--CCAGAGATTCTAAGGGAGGTA-CAGCAAGCG 101
consensus_11203#1 CAGTTTGGCGATACTTCTGGCTTCCAAA-CCAGCTTTCATAACAGCAGCAGCAACAATCA 133
* * * ** * ** * * * ** *** *
consensus_11203#0 GG--ATTCTCTGCACCAACTCCTATCCAAGCT-CAATCATGGCCAAT-------TGCTCT 1003
consensus_11203#2 GG--ATTCTCTGCACCAACTCCTATCCAAGCT-CAATCATGGCCAAT-------TGCTCT 151
consensus_11203#1 AACCAGTGACAATCCAAGCTTTCATGCCAGCAGCAACAACGATCAACCTGGTGATGGTCT 193
* * * * * ** ** * *** *** * * *** ** ***
consensus_11203#0 TAGGAATCGTGATA----TTGTAGCTGT------GGCGAAGACAGGTTCCGGAAAAACAC 1053
consensus_11203#2 TAGGAATCGTGATA----TTGTAGCTGT------GGCGAAGACAGGTTCCGGAAAAACAC 201
consensus_11203#1 CAGCTTTCATGCCAGGTTCTATAGCTCTTCTCGAGGCAGCGATCAGAGCAGAACAAACAA 253
** ** ** * * ***** * *** ** * * * * *****
consensus_11203#0 TGGGTTATCTCATTCCAGGGTTTATCCTTCTTAAGCGCCTTCAACATAATTCAAGGGATG 1113
consensus_11203#2 TGGGTTATCTCATTCCAGGGTTTATCCTTCTTAAGCGCCTTCAACATAATTCAAGGGATG 261
consensus_11203#1 TGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAA-GCAATCGCAACCATGAAGATCCTG 312
** * ** * ** * * ** * ** ** * ** * **
consensus_11203#0 G-TCCAACGGTATTAGTGCTTTCTCCAACAAGGGAATTGGCAACACAA-ATCCAAGATGA 1171
consensus_11203#2 G-TCCAACGGTATTAGTGCTTTCTCCAACAAGGGAATTGGCAACACAA-ATCCAAGATGA 319
consensus_11203#1 GGTCCAAGGCTGTTGGTG---TCTCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGC 369
* ***** * * ** *** ******** * * * * *** ** *** *
consensus_11203#0 AGCGAAAAAGTTTGGGAGATCGTCAAGAATATCGTCTGTTTGT----TTATATGGAGGTG 1227
consensus_11203#2 AGCGAAAAAGTTTGGGAGATCGTCAAGAATATCGTCTGTTTGT----TTATATGGAGGTG 375
consensus_11203#1 ATCATGATGGTGACGAACAGAGTAGATGAAGCTGTTCTCTTACCAAATTATANTATGGTG 429
* * * ** * * * ** * * ** ** ***** ****
consensus_11203#0 C--TCCTA--------AAGGTCCTCAGCT----AAGAGATCTAGAGCGTGGTG-CAGACA 1272
consensus_11203#2 C--TCCTA--------AAGGTCCTCAGCT----AAGAGATCTAGAGCGTGGTN-CAGNCA 420
consensus_11203#1 CAACCTTACCACACCCAAAACCCCCAACCCCAAATCAGATCAAAAAAAAAAAAACAAAAA 489
* * ** ** ** ** * * ***** * * ** *
consensus_11203#0 TTGTGGTTGCAACTCCTGGAAGATTGAATGACATTTTAGAAATGCGAAGAGTGAGCCTAC 1332
consensus_11203#2 TTGTGGTTGCAA------------------------------------------------ 432
consensus_11203#1 ACGCGACCACGCAATGCAATCGCGAGCAAACGAGCACCACCGAACCGATTAGCTCGTGAT 549
* * *
consensus_11203#0 ATCAAGTATCTTATCTTGTTCTTGATGAGGCTGACCGCATGCTTGATATGGGTTTTGAGC 1392
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 GCTCGTCGGTACGGGGGGGATTGGGGAGGAGGACGCGAACCCTAGCGAATGCGGATTGCG 609
consensus_11203#0 CACAAATAAGAAAAATTGTGAAACAAGTACAACCCAAACGACAGACTCTTATGTTCACTG 1452
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 GCGGGGGGAGCGGGGAGGGGACGCGAGGAGATGGAGTGAATGAATGG------------- 656
consensus_11203#0 CCACTTGGCCAAAAGAGGTGAGGAAAATAGCCTCAGATTTGCTGTCCAATCCAGTCCAAG 1512
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 TTAACATTGGGAACACTGATCAACTGGTTGCCAATAAGTCAATCACTCAGTATGTGGATG 1572
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 TTATCACACCTCCGGAGAAATCGAGGCGGCTTGATCAAATCCTAAGGTCACAGGAACCTG 1632
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GATCGAAAATCATAATATTTTGCTCCACAAAGAGGATGTGTGATCAGCTGGCTCGAAACC 1692
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 TAGCACGGCAGTATGGTGCTTCTGCTATTCATGGTGATAAATCACAAGCCGAGAGGGATT 1752
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 CTGTGTTGAGTGAATTTCGAAGTGGCAGATGCCCTATTCTTGTTGCTACTGATGTGGCTG 1812
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 CCCGAGGCTTGGACATAAAGGATATCAGAGTTGTGGTCAACTACGATTTCCCAACAGGTG 1872
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 TTGAGGATTACGTCCATAGAATTGGGAGAACAGGACGGGCTGGAGCGACTGGAGTTGCCT 1932
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 ATACATTCTTCTGTGATCAGGATTCAAAGTATGCTTCAGATCTCGTGAAGATTTTGGAGG 1992
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GTGCAAACCAGTCTGTTTCGCAACAGTTGAGAGATATGGTCTCCCGTGGAGGGTATGGTG 2052
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GAAGGTCACGGCGCTGGGCATCTTCAGATGACTCTTATGGTGGTCGAGGATATGATTCAG 2112
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GCTATACTTCAAGGTCGACTGACAACTATAACAGTGGTTATGGCAGTCAGTCTGGGAATG 2172
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GTTCTAGCTTTCATAGTAGCTTCCATAACAGCAACAGTGGCAATCAGTTTGGCGATACTT 2232
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 CTGGCTTCCAAACCAGCTTTCATAACAGCAGCAGCAACAATCAAACCAGTGACAATCCAA 2292
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GCTTTCATGCCAGCAGCAACAACGATCAACCTGGTGATGGTCTCAGCTTTCATGCCAGGT 2352
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 TCTATAGCTCTTCTCGAGGCAGCGATCAGAGCAGAACAAACAATGCTGGCTTTCGTGATA 2412
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GAAGTAGGAGTCCTCCAAGCAATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTG 2472
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 TCTCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGCATCATGATGGTGACGAACAGA 2532
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GTAGATGAAGCTGTTCTCTTACCAAACTATACTATCGTGCGTGCTCCCCCTGAAGCAAAA 2592
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GTGTGTCCCAGAACTTAACTAACATAGGATAAGACTGTGGATCTTCTGCTGTGCAGATGT 2652
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 AGCGCACTTGATAATGTATGTCTGGTGTTAGTCGTTTGTCAGACCTGGGGGCTCGGACTT 2712
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 CCTTGCTATCTATACCTGCTACCGCTATGATCATGTGGAAACAAACCATCTGAGGCATGC 2772
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 ATTTTGGACGAAAACATGCACTCTTAATCCTTATATGACTTGTAGATTATTTACCCCAGC 2832
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 GTCGTTTACATTGAACTATTTCCATGTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2892
consensus_11203#2 ------------------------------------------------------------
consensus_11203#1 ------------------------------------------------------------
consensus_11203#0 AAACTCGAGACTAGTTCTCTCTCTCTCTCTCT 2924
consensus_11203#2 --------------------------------
consensus_11203#1 --------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||