cluster # 11332

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11332 cluster # 11332 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11332#0 length = 1476 sequences # 5

consensus_11332#1 length = 653 sequences # 2
consensus_11332#2 length = 430 sequences # 1

consensusID : consensus_11332#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1476
fasta sequence

                              [TTCTCCTCGGCCGCGCCCTCGACTCCCCGTCTCGTTCGCCCGCCGCGCCGCGCCGCCTTCCCACTGCATCCCGCGCCGCGCCGCCAGCCGCC---GCATCTTAGGAAGGAGGGGAGCCCGCGGCGGCGGCGGCGGCCAAGATGAGCGACGACGTGATATGGCACTGCATCCGGCACAACCACTGCAGCTTCATGGCCAAGATCACGACGGGGATATTCTGCCGGAACCCGTACAACGCCACCGGAATATGCAACCGGAGCTCCTGCCCTCTCGCCAACAGCCGCTACGCCACCATCCGGGACCATGACGGTATTTTCTACCTATACATGAAAACAGCTGAAAGAGCCCATCTTCCGAACAAATTATGGGAGAGGGTCAAACTACCCAGAAATTATGAGAAAGCAATGGAAGTCATCAATAAGCATCTTGAATTTTGGCCCAAGTTACTTGTGCACAAAATTAAGCAGCGCCTGACAAAAATGACTCAGTATCGGATAAGAATGAGGAAGCTTCAACTGAAAGTGAGAGAGAAGGTGATGACAATGCCCAGGAAGGAGACTCAGCGCCATCTCAGAAGAATGGATAAAGCTGAAAAGGCCGCTCAGTTGGAAAAGAATATTGAAAGTGAATTGAAGGAACGGTTGAAGAAAGGTGTCTATGGTGACATCTATAACTATCCCTTCAAAGAATTTGACACTATTCTTGAAATGGAAAAAGATGATGTAGCTCCTACTGAGGAAGAGGAAGAAGAAGAGGTGGAGTATGTTGAAGGTGATGATGAAATGGATGACATGGAAGACATTGAAGATTTTGGAGGCCTTCCTGATGATGATGAAGATGATGATAATGATGGTGAGACGGATGAAGATGATCTTTTGGATGAACCGGTAGCAAAGAAACCTAAAGGGCGAGGTTCTGATTTGAGATCAAATATAGGGAAAAAATCCAAGAAGCTTATCACTGAGGTGGA-ACGAGATGATGACATGGGTATCAGACGAAGGACGCGAATGTGAGTTGTGCGAGCACTGGCTTCAATTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTAGACTTAGTTGCTGAGAAATCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGCACTTTACAGGAAGATGCTCACTCTGGCCTGAGGCAGTTGTTTAGGGTTGTTTGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTCTTAGGCAAGCGGGTGTTTTGC-GTTACACAGATCTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTACGTCCACCAAAAGCAGTAATTTTCTTAATGTTTTGCAGCAACATTTGATCAAACTCTCTGGTTTAAAATGATCATTGGATGGTTTCCACTGGAATTG]

[+] EMBL AK068904             [TTCTCCTCGGCCGCGCCCTCGACTCCCCGTCTCGTTCGCCCGCCGCGCCGCGCCGCCTTCCCACTGCATCCCGCGCCGCGCCGCCAGCCGCC   GCATCTTAGGAAGGAGGGGAGCCCGCGGCGGCGGCGGCGGCCAAGATGAGCGACGACGTGATATGGCACTGCATCCGGCACAACCACTGCAGCTTCATGGCCAAGATCACGACGGGGATATTCTGCCGGAACCCGTACAACGCCACCGGAATATGCAACCGGAGCTCCTGCCCTCTCGCCAACAGCCGCTACGCCACCATCCGGGACCATGACGGTATTTTCTACCTATACATGAAAACAGCTGAAAGAGCCCATCTTCCGAACAAATTATGGGAGAGGGTCAAACTACCCAGAAATTATGAGAAAGCAATGGAAGTCATCAATAAGCATCTTGAATTTTGGCCCAAGTTACTTGTGCACAAAATTAAGCAGCGCCTGACAAAAATGACTCAGTATCGGATAAGAATGAGGAAGCTTCAACTGAAAGTGAGAGAGAAGGTGATGACAATGCCCAGGAAGGAGACTCAGCGCCATCTCAGAAGAATGGATAAAGCTGAAAAGGCCGCTCAGTTGGAAAAGAATATTGAAAGTGAATTGAAGGAACGGTTGAAGAAAGGTGTCTATGGTGACATCTATAACTATCCCTTCAAAGAATTTGACACTATTCTTGAAATGGAAAAAGATGATGTAGCTCCTACTGAGGAAGAGGAAGAAGAAGAGGTGGAGTATGTTGAAGGTGATGATGAAATGGATGACATGGAAGACATTGAAGATTTTGGAGGCCTTCCTGATGATGATGAAGATGATGATAATGATGGTGAGACGGATGAAGATGATCTTTTGGATGAACCGGTAGCAAAGAAACCTAAAGGGCGAGGTTCTGATTTGAGATCAAATATAGGGAAAAAATCCAAGAAGCTTATCACTGAGGTGGA ACGAGATGATGACATGGGTATCAGACGAAGGACGCGAATGTGAGTTGTGCGAGCACTGGCTTCAATTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTAGACTTAGTTGCTGAGAAATCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGCACTTTACAG                                                                                                                                                                                                                                                                   ]
[+] EMBL AK058966             [ TCTCCTCGGCCGCGCCCTCGACTCCCCGTCTCGTTCGCCCGCCGCGCCGCGCCGCCTTCCCACTGCATCCCGCGCCGCGCCGCCAGCCGCCGCAGCATCTTAGGAAGGAGGGGAGCCCGCGGCGGCGGCGGCGGCCAAGATGAGCGACGACGTGATATGGCACTGCATCCGGCACAACCACTGCAGCTTCATGGCCAAGATCACGACGGGGATATTCTGCCGGAACCCGTACAACGCCACCGGAATATGCAACCGGAGCTCCTGCCCTCTCGCCAACAGCCGCTACGCCACCATCCGGGACCATGACGGTATTTTCTACCTATACATGAAAACAGCTGAAAGAGCCCATCTTCCGAACAAATTATGGGAGAGGGTCAAACTACCCAGAAATTATGAGAAAGCAATGGAAGTCATCAATAAGCATCTTGAATTTTGGCCCAAGTTACTTGTGCACAAAATTAAGCAGCGCCTGACAAAAATGACTCAGTATCGGATAAGAATGAGGAAGCTTCAACTGAAAGTGAGAGAGAAGGTGATGACAATGCCCAGGAAGGAGACTCAGCGCCATCTCAGAAGAATGGATAAAGCTGAAAAGGCCGCTCAGTTGGAAAAGAATATTGAAAGTGAATTGAAGGAACGGTTGAAGAAAGGTGTCTATGGTGACATCTATAACTATCCCTTCAAAGAATTTGACACTATTCTTGAAATGGAAAAAGATGATGTAGCTCCTACTGAGGAAGAGGAAGAAGAAGAGGTGGAGTATGTTGAAGGTGATGATGAAATGGATGACATGGAAGACATTGAAGATTTTGGAGGCCTTCCTGATGATGATGAAGATGATGATAATGATGGTGAGACGGATGAAGATGATCTTTTGGATGAACCGGTAGCAAAGAAACCTAAAGGGCGAGGTTCTGATTTGAGATCAAA ATAGGG AAAAATCCAAGAAGCTTATCACTGAGGTGGA ACGAGATGATGACATGGGTATCAGACGAAGGACGCGAATGTGAGTTGTGCGAGCACTGGCTTCAATTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTAGACTTAGTTGCTGAGAAATCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGCACTTTACAGGAAGATGCTCACTCTGGCCTGAGGCAGTTGTTTAGGGTTGTTTGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTCTTAGGCAAGCGGGTGTTTTGC GTTACACAGATCTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTACGTCCACCAAAAGCAGTAATTTTCTTAATGTTTTGCAGCAACATTTGATCAAACTCTCTGGTTTAAAATGATCATTGGATGGTTTCCACTGGAATTG]
[+] EMBL OSR06101A            [                                                                                                                                                                                                                                                                                                                                                                                                            AGAAAGCAATGGAAGTCATCAATAAGCATCTTGAATTTTGGCCCAAGTTACTTGTGCACAAAATTAAGCAGCGCCTGACAAAAATGACTCAGTATCGGATAAGAATGAGGAAGCTTCAACTGAAAGTGAGANAGAAGGTGATGACAATGCCCAGGAAGGAGACTCAGCGCCATCTCAGAAGAATGGATAAAGCTGAAAAGGCCGCTCAGTTGGAAAAGAATATTGAAAGTGAATTGAAGGAACGGTTGAAGAAAGGTGTCTATGGTGACATCTATAACTATCCCTTCAAAGANTTTGACACTATTCTTGAAATGGAAAAAGATGATGTAGCTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU031698             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATGATCTTTTGGATGAACCGGTAGCAAAGAANCCTAAAGGGCGAGGTTCTGATTTGANATCAAATATAGGGAAAAAATCCAAGANGCTTATCACTGAGGTGGACACGAGATGATGACATGGGTATCAGACGAAGGACGCGAATGTGAGTTGTGCGAGCACTGGCTTCAATTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTAGACTTAGTTGCTGAGAAATCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGCACTTTACAGGAAGATGCTCACTCTGGCCTGAGGCAGTTGTTTAGGGTTGTTTGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTCTTAGGCAAGCGGGTGTTTTGC GTTAaaaaaaaaa                                                                                                                                          ]
[+] EMBL OSS15189A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCGAGCACTGGCTTCAANTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTAGACTTAGTTGCTGAGAAATCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGCACTTTACAGGAAGATGCTCACTCTGGCCTGAGGCAGTTGTTTAGGGTTGTTTGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTCTTAGGCAAGCGGGTGTTTTGCGGTTNCACAGGTCTTAAC                                                                                                                                      ]




>consensus_11332#0
TTCTCCTCGGCCGCGCCCTCGACTCCCCGTCTCGTTCGCCCGCCGCGCCGCGCCGCCTTC
CCACTGCATCCCGCGCCGCGCCGCCAGCCGCCGCATCTTAGGAAGGAGGGGAGCCCGCGG
CGGCGGCGGCGGCCAAGATGAGCGACGACGTGATATGGCACTGCATCCGGCACAACCACT
GCAGCTTCATGGCCAAGATCACGACGGGGATATTCTGCCGGAACCCGTACAACGCCACCG
GAATATGCAACCGGAGCTCCTGCCCTCTCGCCAACAGCCGCTACGCCACCATCCGGGACC
ATGACGGTATTTTCTACCTATACATGAAAACAGCTGAAAGAGCCCATCTTCCGAACAAAT
TATGGGAGAGGGTCAAACTACCCAGAAATTATGAGAAAGCAATGGAAGTCATCAATAAGC
ATCTTGAATTTTGGCCCAAGTTACTTGTGCACAAAATTAAGCAGCGCCTGACAAAAATGA
CTCAGTATCGGATAAGAATGAGGAAGCTTCAACTGAAAGTGAGAGAGAAGGTGATGACAA
TGCCCAGGAAGGAGACTCAGCGCCATCTCAGAAGAATGGATAAAGCTGAAAAGGCCGCTC
AGTTGGAAAAGAATATTGAAAGTGAATTGAAGGAACGGTTGAAGAAAGGTGTCTATGGTG
ACATCTATAACTATCCCTTCAAAGAATTTGACACTATTCTTGAAATGGAAAAAGATGATG
TAGCTCCTACTGAGGAAGAGGAAGAAGAAGAGGTGGAGTATGTTGAAGGTGATGATGAAA
TGGATGACATGGAAGACATTGAAGATTTTGGAGGCCTTCCTGATGATGATGAAGATGATG
ATAATGATGGTGAGACGGATGAAGATGATCTTTTGGATGAACCGGTAGCAAAGAAACCTA
AAGGGCGAGGTTCTGATTTGAGATCAAATATAGGGAAAAAATCCAAGAAGCTTATCACTG
AGGTGGAACGAGATGATGACATGGGTATCAGACGAAGGACGCGAATGTGAGTTGTGCGAG
CACTGGCTTCAATTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAG
ATTGGCTTAGACTTAGTTGCTGAGAAATCAAGATGAGTTGTGGCATAGAACATTATATTT
ATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTT
GCAGCAAGCACTTTACAGGAAGATGCTCACTCTGGCCTGAGGCAGTTGTTTAGGGTTGTT
TGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTCTTAGGCAAGCGGGTGT
TTTGCGTTACACAGATCTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTAC
GTCCACCAAAAGCAGTAATTTTCTTAATGTTTTGCAGCAACATTTGATCAAACTCTCTGG
TTTAAAATGATCATTGGATGGTTTCCACTGGAATTG

consensusID : consensus_11332#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 653
fasta sequence

                              [ATGGAAGACATTGAAGATTTGGAGGCCTTCCTGATGATGATGAAGATGATGATAATGATGGTGAGACGGATGAAGATGATCTTTTGGATGAACCGGTAGCAAAGAAACCTAAAGGGCGAGGTTCTGATTTGAGATCAAATATAGGGAAAAAATCCAAGAAGCTTATCACTGAGGTGGAACGAGATGATGACATGGGTATCAGACGAAGGACGCGAATGTGAGTTGTGCGAGCACTGGCTTCAATTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTAGACTTAGTTGCTGAGAAGTCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGCCCTTTACAGGAAGATGCTCACTCTGGCCTGAGGCAGTTGTTTAGGGTTGTTTGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTTTTAGGCAAGCGGGTGTTTTGCGTTACACAGATTTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTACGTCCACCAAAAGCAGTAATTTTCTTAATGTTTTGCAGCAACATTTGATCAAAAAAAAAAAAA]

[-] EMBL CA761409             [ATGGAAGACATTGAAGATTTGGAGGCCTTCCTGATGATGATGAAGATGATGATAATGATGGTGAGACGGATGAAGATGATCTTTTGGATGAACCGGTAGCAAAGAAACCTAAAGGGCGAGGTTCTGATTTGAGATCAAATATAGGGAAAAAATCCAAGAAGCTTATCACTGAGGTGGAACGAGATGATGACATGGGTATCAGACGAAGGACGCGAATGTGAGTTGTGCGAGCACTGGCTTCAATTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTAGACTTAGTTGCTGAGAAGTCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGCCCTTTACAGGAAGATGCTCACTCTGGCCTGAGGCAGTTGTTTAGGGTTGTTTGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTTTTAGGCAAGCGGGTGTTTTGCGTTACACAGATTTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTACGTCCACCAAAAGCAGTAATTTTCTTAATGTTTTGCAGCAACATTTGATCAAAAAAAAAAAAA]
[-] EMBL CA761451             [ATGGAAGACATTGAAGATTTGGAGGCCTTCCTGATGATGATGAAGATGATGATAATGATGGTGAGACGGATGAAGATGATCTTTTGGATGAACCGGTAGCAAAGAAACCTAAAGGGCGAGGTTCTGATTTGAGATCAAATATAGGGAAAAAATCCAAGAAGCTTATCACTGAGGTGGAACGAGATGATGACATGGGTATCAGACGAAGGACGCGAATGTGAGTTGTGCGAGCACTGGCTTCAATTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTAGACTTAGTTGCTGAGAAGTCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGCCCTTTACAGGAAGATGCTCACTCTGGCCTGAGGCAGTTGTTTAGGGTTGTTTGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTTTTAGGCAAGCGGGTGTTTTGCGTTACACAGATTTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTACGTCCACCAAAAGCAGTAATTTTCTTAATGTTTTGCAGCAACATTTGATCAAAAAAAAAAAAA]




>consensus_11332#1
ATGGAAGACATTGAAGATTTGGAGGCCTTCCTGATGATGATGAAGATGATGATAATGATG
GTGAGACGGATGAAGATGATCTTTTGGATGAACCGGTAGCAAAGAAACCTAAAGGGCGAG
GTTCTGATTTGAGATCAAATATAGGGAAAAAATCCAAGAAGCTTATCACTGAGGTGGAAC
GAGATGATGACATGGGTATCAGACGAAGGACGCGAATGTGAGTTGTGCGAGCACTGGCTT
CAATTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTA
GACTTAGTTGCTGAGAAGTCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGG
CAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGC
CCTTTACAGGAAGATGCTCACTCTGGCCTGAGGCAGTTGTTTAGGGTTGTTTGTATCAAC
TTATCCATCGACGGATAAGCCATCCAATTTGGCTTTTAGGCAAGCGGGTGTTTTGCGTTA
CACAGATTTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTACGTCCACCAA
AAGCAGTAATTTTCTTAATGTTTTGCAGCAACATTTGATCAAAAAAAAAAAAA

consensusID : consensus_11332#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 430
fasta sequence

                              [ATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTAGACTTAGTTGCTGAGAAATCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGCNCTTTACAGGAAGATGCTCACTNTGGCCTGAGGCAGTTGTTTAGGGTTGTTTGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTNTTAGGCAAGCGGGTGTTTTGCGTTACACAGATNTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTACGGTCCACCAAAANCAGTAATTTTNTTAATGTTTTGCAGCAACATTTGATCAAACTCTNTGGTTTAAAATGNTCNAAAAAAAAAAAA]

[+] EMBL AU198058             [ATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTAGACTTAGTTGCTGAGAAATCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGCNCTTTACAGGAAGATGCTCACTNTGGCCTGAGGCAGTTGTTTAGGGTTGTTTGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTNTTAGGCAAGCGGGTGTTTTGCGTTACACAGATNTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTACGGTCCACCAAAANCAGTAATTTTNTTAATGTTTTGCAGCAACATTTGATCAAACTCTNTGGTTTAAAATGNTCNAAAAAAAAAAAA]




>consensus_11332#2
ATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAGATTGGCTTAGACTTAG
TTGCTGAGAAATCAAGATGAGTTGTGGCATAGAACATTATATTTATATGTTGGCAAACTA
TTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTTGCAGCAAGCNCTTTAC
AGGAAGATGCTCACTNTGGCCTGAGGCAGTTGTTTAGGGTTGTTTGTATCAACTTATCCA
TCGACGGATAAGCCATCCAATTTGGCTNTTAGGCAAGCGGGTGTTTTGCGTTACACAGAT
NTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTACGGTCCACCAAAANCAG
TAATTTTNTTAATGTTTTGCAGCAACATTTGATCAAACTCTNTGGTTTAAAATGNTCNAA
AAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11332#0      TTCTCCTCGGCCGCGCCCTCGACTCCCCGTCTCGTTCGCCCGCCGCGCCGCGCCGCCTTC 60
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      CCACTGCATCCCGCGCCGCGCCGCCAGCCGCCGCATCTTAGGAAGGAGGGGAGCCCGCGG 120
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      CGGCGGCGGCGGCCAAGATGAGCGACGACGTGATATGGCACTGCATCCGGCACAACCACT 180
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      GCAGCTTCATGGCCAAGATCACGACGGGGATATTCTGCCGGAACCCGTACAACGCCACCG 240
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      GAATATGCAACCGGAGCTCCTGCCCTCTCGCCAACAGCCGCTACGCCACCATCCGGGACC 300
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      ATGACGGTATTTTCTACCTATACATGAAAACAGCTGAAAGAGCCCATCTTCCGAACAAAT 360
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      TATGGGAGAGGGTCAAACTACCCAGAAATTATGAGAAAGCAATGGAAGTCATCAATAAGC 420
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      ATCTTGAATTTTGGCCCAAGTTACTTGTGCACAAAATTAAGCAGCGCCTGACAAAAATGA 480
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      CTCAGTATCGGATAAGAATGAGGAAGCTTCAACTGAAAGTGAGAGAGAAGGTGATGACAA 540
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      TGCCCAGGAAGGAGACTCAGCGCCATCTCAGAAGAATGGATAAAGCTGAAAAGGCCGCTC 600
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      AGTTGGAAAAGAATATTGAAAGTGAATTGAAGGAACGGTTGAAGAAAGGTGTCTATGGTG 660
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      ACATCTATAACTATCCCTTCAAAGAATTTGACACTATTCTTGAAATGGAAAAAGATGATG 720
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      TAGCTCCTACTGAGGAAGAGGAAGAAGAAGAGGTGGAGTATGTTGAAGGTGATGATGAAA 780
consensus_11332#1      ------------------------------------------------------------
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      TGGATGACATGGAAGACATTGAAGATTTTGGAGGCCTTCCTGATGATGATGAAGATGATG 840
consensus_11332#1      --------ATGGAAGACATTGAAGATTT-GGAGGCCTTCCTGATGATGATGAAGATGATG 51
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      ATAATGATGGTGAGACGGATGAAGATGATCTTTTGGATGAACCGGTAGCAAAGAAACCTA 900
consensus_11332#1      ATAATGATGGTGAGACGGATGAAGATGATCTTTTGGATGAACCGGTAGCAAAGAAACCTA 111
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      AAGGGCGAGGTTCTGATTTGAGATCAAATATAGGGAAAAAATCCAAGAAGCTTATCACTG 960
consensus_11332#1      AAGGGCGAGGTTCTGATTTGAGATCAAATATAGGGAAAAAATCCAAGAAGCTTATCACTG 171
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      AGGTGGAACGAGATGATGACATGGGTATCAGACGAAGGACGCGAATGTGAGTTGTGCGAG 1020
consensus_11332#1      AGGTGGAACGAGATGATGACATGGGTATCAGACGAAGGACGCGAATGTGAGTTGTGCGAG 231
consensus_11332#2      ------------------------------------------------------------
                                                                                   

consensus_11332#0      CACTGGCTTCAATTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAG 1080
consensus_11332#1      CACTGGCTTCAATTGCATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAG 291
consensus_11332#2      ----------------ATATGCCACGGGGTGCTGTGCTGTCAGTTTTGGTTGTACCTGAG 44
                                       ********************************************

consensus_11332#0      ATTGGCTTAGACTTAGTTGCTGAGAAATCAAGATGAGTTGTGGCATAGAACATTATATTT 1140
consensus_11332#1      ATTGGCTTAGACTTAGTTGCTGAGAAGTCAAGATGAGTTGTGGCATAGAACATTATATTT 351
consensus_11332#2      ATTGGCTTAGACTTAGTTGCTGAGAAATCAAGATGAGTTGTGGCATAGAACATTATATTT 104
                       ************************** *********************************

consensus_11332#0      ATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTT 1200
consensus_11332#1      ATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTT 411
consensus_11332#2      ATATGTTGGCAAACTATTAGGTTTAGCGTTCAAATTGCAAGATAAGTGTAACATTATTTT 164
                       ************************************************************

consensus_11332#0      GCAGCAAGCACTTTACAGGAAGATGCTCACTCTGGCCTGAGGCAGTTGTTTAGGGTTGTT 1260
consensus_11332#1      GCAGCAAGCCCTTTACAGGAAGATGCTCACTCTGGCCTGAGGCAGTTGTTTAGGGTTGTT 471
consensus_11332#2      GCAGCAAGCNCTTTACAGGAAGATGCTCACTNTGGCCTGAGGCAGTTGTTTAGGGTTGTT 224
                       ********* ********************* ****************************

consensus_11332#0      TGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTCTTAGGCAAGCGGGTGT 1320
consensus_11332#1      TGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTTTTAGGCAAGCGGGTGT 531
consensus_11332#2      TGTATCAACTTATCCATCGACGGATAAGCCATCCAATTTGGCTNTTAGGCAAGCGGGTGT 284
                       ******************************************* ****************

consensus_11332#0      TTTGCGTTACACAGATCTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTAC 1380
consensus_11332#1      TTTGCGTTACACAGATTTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTAC 591
consensus_11332#2      TTTGCGTTACACAGATNTTAACAGTTCCAACGTCACAAACAATCTGTTTGTAACCGCTAC 344
                       **************** *******************************************

consensus_11332#0      G-TCCACCAAAAGCAGTAATTTTCTTAATGTTTTGCAGCAACATTTGATCAAACTCTCTG 1439
consensus_11332#1      G-TCCACCAAAAGCAGTAATTTTCTTAATGTTTTGCAGCAACATTTGATCAAAA-----A 645
consensus_11332#2      GGTCCACCAAAANCAGTAATTTTNTTAATGTTTTGCAGCAACATTTGATCAAACTCTNTG 404
                       * ********** ********** *****************************       

consensus_11332#0      GTTTAAAATGATCATTGGATGGTTTCCACTGGAATTG 1476
consensus_11332#1      AAAAAAAA----------------------------- 653
consensus_11332#2      GTTTAAAATGNTCNAAAAAAAAAAAA----------- 430
                           ****