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Oryza sativa
cluster # 11342 cluster # 11342       Sequences # 8       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11342#0 length = 3430 sequences # 6  
 consensus_11342#1 length = 977 sequences # 1  
consensus_11342#2 length = 483 sequences # 1  
consensusID : consensus_11342#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 3430
fasta sequence 
                              [CACGCACGCAGAGTCGAGACGCGCACGCCACCCTGTCGCTCTCTCTCTCTCGCTCTCGCCCTCGCCTCTCCCCTCCCCATCACCACCCAAAACCCTAGTTACCCCCACCCTCTCAAAACCCTAACCCCACCTCACCACCCTCCCCGGCGGCGGCGGCCCTTGTGGCTGTGCACACATCACTCCACCGGATAAGCTCTAGCTATCTATCATCCAAAGCAGCTTACTAGTCTGTGCTCTCTCTGTGTCGGAAGGCGGCGGCGGCGGCGCGGCGGCTGGTGGTGGTGGGCGGGGGAGGCGGCGGTAGAGCGGTGGTATCTGGGCGTTTTGTGGCGGGGGCGGCTCGGGCGTCGGCGATGGAGGAGCCGAATGTGGGCGGAGGGGCGGCGGCGGTGGTGGCGCCTGAGGGGGCGGATCCGGCTGGCGGCGGCGGCGGTGGACCGGGCGCCCCCGCGTCTCCCTGGAGGAAGACCACGCCGCCGCCTGTGGCGGGTGAGGCGGTGGTCATGGGGGCCAAGTCGTGGCCCGCGCTGGAGGAGGCTAGGCAGAAGGTCGCCGCCGCGGAGGCCGCGGCGAGGCGCGGGGGCGGNCCAATGGCTGGCGGCGGTGGCGAACGCAGCGAAGGGGGTGCGCAGGCGCAGCAGCCGGTCCCCTCCCCCGCCACAGTCGCAGGCACCTAATCGCACGCACAAGTTTGGTGCCCATGGAAATCCCGACAAGAATGATCAAGCATACCATAGAAGTGGCCCCAAGAGACGTTCTCCTGCTGCGAATGGGACTCCATCTTATCCTGCCGCGATGCCATATCACCAACATCCAGGGCAACCTTTTTACTACCCTGTTATTCCCAGTCCAGTGATACTACATGAATATCCTTACCCACCTTTTGCTGTTCCGGTTCCAAGTCATGACCCGCATGCTGGAAAATCTGGATATGAGAATTCTATGCCTGCTTATGTTCCAGTAGATCAAGCTGGTGGCAATGAAGGTAACCGGCCAGTGCCTCCACAACCAAGGGGAGACCTTCATGCTTGGAGGCCTCCTGTTGGTGCAAGACCCCAGCCTGGCCTTGAAGGCCGTGGCCATTTTAATCACAATTGGCAGAATCCCCAGATGTTCGGTACCAGGGAAAACACAAGTGTACCACAAGGTGCTGGGCCAAGAGCTTTCATGAGACCAATGGCACATCTGCCTCACACTCTGGGATACATAAATGGTCCACCATACCCTGGGCCAATGCCTCCCATGTATTATTACATGCCTGCTGTACCCATGGAGCCGATGAGAGGTCCACCACGTTTTGTCCAAAACCAACCACCTCCTCATCCTGTTTTATCTCCTGAATTAAGAGCTAAAATACTGACTCAAGTGGAGTACTATTTTAGTGATAGTAATCTGGATCATGATAATTTTCTTAAATCTTTAATGGACGAACATGGCTGGGTTCCAATTTCCAAAGTTGCAGACTTCAATCGGCTTAAGAAAATGACCACGGATATACAACTGATTGTAGAAGCATTGGCAGACTCAAGTCTTTTAGAAGTTCAGGATGGTAATATGAGGCGGCGTTCTGACTGGTCAAAGTGGGTTTCCTTGTCTGGGACATCTCTTCCGAGTCCATCTTCAACCAGTATGGATAACACTACTGGTGAATGTAATAAGGATGCTTATTCTGAAGATGAAAAGAAGCCTCATCCTCGCAGCGTAGATTGTGTTGGTATGGGGGCTTCTGATGAGCCATCACATGATACACTCAGTAGTTCAGTCACTTCACTGAATAAGGGCTTATCAAACATTAGTATTGATAATAAGCCTAAGAGCATTTCTGCATGCTCTCTGAACTCACAAAAACATGAAGCTGCTTTTAGGACTGGTGATGTTAAAGTTCAGAAAGTAAACACAAAGATCAAAGTGCCTGATTCTCAGAGGGAAAGAGGTTTCTGTAATGATTTCATAAGTGACTCTCCTAGCTTCAGCGGCGATCAAAGCACATTCTTGCTTGATGAGGAATTAGAATTGGAGCATGCAGAGCTTTCACATGATCTCTATTCGCACAAAAGGGTCGATGATGAGGAAGATGATTTTTATGTTGATGACCAAGATGTGAACAGGCTAATAATCGTTACGCAGGACGGACCTCAAGCATTTTCAAAAGAGGAAATATCAAGAATCAATGAGGGGTTATATTACTATGAGAATCACGCTTATAATCAAAGAAGTTCCCAAGCTGGCACCATAGATATTGATTCTAAACCAGCTGGTGGTTCAAAGGGGAATCCCATTAATATTGTAAACAATGGAATTGAAGATTCTGGACAGCCTATCCCACGAAGGAGGCACAACAGAGGCAATAGAAAAGCACAGTCCTCTCATAAGCAGAGGTTCTTTCCTGGTAACTTTGCGAATAACACCAATAATAGATCTCACTATGGCGGTGTATCAGAGAGCCCCCCAAGCAATTCAATTGGATATTTCTACGGATCTACTCCAGAAAACCACAGCTATAGAAGTTCAAGGTTGAGCTCATCTCCTCATGGAATCCCTACTGGTAGCTCGCCTGTTGGTTCTGTGCCCAAATCTTTCCCACCATTTCAACACCCAAGTCATCAGCTTTTAGAGAAAAATAAATTCCAGCAGCAAAGGTACAATAAGTTCAAAAATCGATGCATCGCTGAACGCAAGAAGTTAGGGATCGGTTGCAGTGAGGAAATGAATTCGTTATATCGTTTTTGGTCGTATTATCTAAGAGATAATTTTAATGATGATATGTACAAACATTTTAAGAAGTTTGCACTAGATGACGCGGCAGCAAATTACAGATATGGACTTGAATGTCTCTTCAGATTTTATAGTTATGGTTTGGAGAAAAACTTCCAACGCAATGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGACTCGAAAAATACTGGGCTTTCCACCATTTCCGAAATCAAGATAGCAGCCCCATTATCAAGCATCCAGAATTGGAGAGGCTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCACGGAAGGCAGCAGAGAAAGAAACTGGCAGCAGTACTGCTGCCGCCGCAGGCCATAACAAGGCTGATGCGAAGTAGGTCCTAGCATGGCATGAAATT-TTGGTGGTCATCCCACAAAAAGGAGAAAGTAGCAAAACCGTTTTTGTTTGGTGAAAAACTTAAGGATTTGAGTAGACACCTGTGCAGATTTTGTTCTCCCCTGCCGACGATACTTGTGTGGCCTTGTCCAGGAAATTTTCCTCTCGCATTTTTTCCCATTACATTCCTGGCGCAGCGCCCTGTGGGATTTGTACATAAAGATAATAATTACTTGTTGATTAAATGGACAAATAATAGAGCCTGGAGTTAAAATGACACGGCATTGTCGTCTTGC]

[+] EMBL AK121684             [CACGCACGCAGAGTCGAGACGCGCACGCCACCCTGTCGCTCTCTCTCTCTCGCTCTCGCCCTCGCCTCTCCCCTCCCCATCACCACCCAAAACCCTAGTTACCCCCACCCTCTCAAAACCCTAACCCCACCTCACCACCCTCCCCGGCGGCGGCGGCCCTTGTGGCTGTGCACACATCACTCCACCGGATAAGCTCTAGCTATCTATCATCCAAAGCAGCTTACTAGTCTGTGCTCTCTCTGTGTCGGAAGGCGGCGGCGGCGGCGCGGCGGCTGGTGGTGGTGGGCGGGGGAGGCGGCGGTAGAGCGGTGGTATCTGGGCGTTTTGTGGCGGGGGCGGCTCGGGCGTCGGCGATGGAGGAGCCGAATGTGGGCGGAGGGGCGGCGGCGGTGGTGGCGCCTGAGGGGGCGGATCCGGCTGGCGGCGGCGGCGGTGGACCGGGCGCCCCCGCGTCTCCCTGGAGGAAGACCACGCCGCCGCCTGTGGCGGGTGAGGCGGTGGTCATGGGGGCCAAGTCGTGGCCCGCGCTGGAGGAGGCTAGGCAGAAGGTCGCCGCCGCGGAGGCCGCGGCGAGGCGCGGGGGCGGNCCAATGGCTGGCGGCGGTGGCGAACGCAGCGAAGGGGGTGCGCAGGCGCAGCAGCCGGTCCCCTCCCCCGCCACAGTCGCAGGCACCTAATCGCACGCACAAGTTTGGTGCCCATGGAAATCCCGACAAGAATGATCAAGCATACCATAGAAGTGGCCCCAAGAGACGTTCTCCTGCTGCGAATGGGACTCCATCTTATCCTGCCGCGATGCCATATCACCAACATCCAGGGCAACCTTTTTACTACCCTGTTATTCCCAGTCCAGTGATACTACATGAATATCCTTACCCACCTTTTGCTGTTCCGGTTCCAAGTCATGACCCGCATGCTGGAAAATCTGGATATGAGAATTCTATGCCTGCTTATGTTCCAGTAGATCAAGCTGGTGGCAATGAAGGTAACCGGCCAGTGCCTCCACAACCAAGGGGAGACCTTCATGCTTGGAGGCCTCCTGTTGGTGCAAGACCCCAGCCTGGCCTTGAAGGCCGTGGCCATTTTAATCACAATTGGCAGAATCCCCAGATGTTCGGTACCAGGGAAAACACAAGTGTACCACAAGGTGCTGGGCCAAGAGCTTTCATGAGACCAATGGCACATCTGCCTCACACTCTGGGATACATAAATGGTCCACCATACCCTGGGCCAATGCCTCCCATGTATTATTACATGCCTGCTGTACCCATGGAGCCGATGAGAGGTCCACCACGTTTTGTCCAAAACCAACCACCTCCTCATCCTGTTTTATCTCCTGAATTAAGAGCTAAAATACTGACTCAAGTGGAGTACTATTTTAGTGATAGTAATCTGGATCATGATAATTTTCTTAAATCTTTAATGGACGAACATGGCTGGGTTCCAATTTCCAAAGTTGCAGACTTCAATCGGCTTAAGAAAATGACCACGGATATACAACTGATTGTAGAAGCATTGGCAGACTCAAGTCTTTTAGAAGTTCAGGATGGTAATATGAGGCGGCGTTCTGACTGGTCAAAGTGGGTTTCCTTGTCTGGGACATCTCTTCCGAGTCCATCTTCAACCAGTATGGATAACACTACTGGTGAATGTAATAAGGATGCTTATTCTGAAGATGAAAAGAAGCCTCATCCTCGCAGCGTAGATTGTGTTGGTATGGGGGCTTCTGATGAGCCATCACATGATACACTCAGTAGTTCAGTCACTTCACTGAATAAGGGCTTATCAAACATTAGTATTGATAATAAGCCTAAGAGCATTTCTGCATGCTCTCTGAACTCACAAAAACATGAAGCTGCTTTTAGGACTGGTGATGTTAAAGTTCAGAAAGTAAACACAAAGATCAAAGTGCCTGATTCTCAGAGGGAAAGAGGTTTCTGTAATGATTTCATAAGTGACTCTCCTAGCTTCAGCGGCGATCAAAGCACATTCTTGCTTGATGAGGAATTAGAATTGGAGCATGCAGAGCTTTCACATGATCTCTATTCGCACAAAAGGGTCGATGATGAGGAAGATGATTTTTATGTTGATGACCAAGATGTGAACAGGCTAATAATCGTTACGCAGGACGGACCTCAAGCATTTTCAAAAGAGGAAATATCAAGAATCAATGAGGGGTTATATTACTATGAGAATCACGCTTATAATCAAAGAAGTTCCCAAGCTGGCACCATAGATATTGATTCTAAACCAGCTGGTGGTTCAAAGGGGAATCCCATTAATATTGTAAACAATGGAATTGAAGATTCTGGACAGCCTATCCCACGAAGGAGGCACAACAGAGGCAATAGAAAAGCACAGTCCTCTCATAAGCAGAGGTTCTTTCCTGGTAACTTTGCGAATAACACCAATAATAGATCTCACTATGGCGGTGTATCAGAGAGCCCCCCAAGCAATTCAATTGGATATTTCTACGGATCTACTCCAGAAAACCACAGCTATAGAAGTTCAAGGTTGAGCTCATCTCCTCATGGAATCCCTACTGGTAGCTCGCCTGTTGGTTCTGTGCCCAAATCTTTCCCACCATTTCAACACCCAAGTCATCAGCTTTTAGAGAAAAATAAATTCCAGCAGCAAAGGTACAATAAGTTCAAAAATCGATGCATCGCTGAACGCAAGAAGTTAGGGATCGGTTGCAGTGAGGAAATGAATTCGTTATATCGTTTTTGGTCGTATTATCTAAGAGATAATTTTAATGATGATATGTACAAACATTTTAAGAAGTTTGCACTAGATGACGCGGCAGCAAATTACAGATATGGACTTGAATGTCTCTTCAGATTTTATAGTTATGGTTTGGAGAAAAACTTCCAACGCAATGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGACTCGAAAAATACTGGGCTTTCCACCATTTCCGAAATCAAGATAGCAGCCCCATTATCAAGCATCCAGAATTGGAGAGGCTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCACGGAAGGCAGCAGAGAAAGAAACTGGCAGCAGTACTGCTGCCGCCGCAGGCCATAACAAGGCTGATGCGAAGTAGGTCCTAGCATGGCATGAAATT TTGGTGGTCATCCCACAAAAAGGAGAAAGTAGCAAAACCGTTTTTGTTTGGTGAAAAACTTAAGGATTTGAGTAGACACCTGTGCAGATTTTGTTCTCCCCTGCCGACGATACTTGTGTGGCCTTGTCCAGGAAATTTTCCTCTCGCATTTTTTCCCATTACATTCCTGGCGCAGCGCCCTGTGGGATTTGTACATAAAGATAATAATTACTTGTTGATTAAATGGACAAATAATAGAGCCTGGAGTTAAAATGACACGGCATTGTCGTCTTG ]
[+] EMBL CB000815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGAAGATTCTGGACAGCCTATCCCACGAAGGAGGCACAACAGAGGCAATAGAAAAGCACAGTCCTCTCATAAGCAGAGGTTCTTTCCTGGTAACTTTGCGAATAACACCAATAATAGATCTCACTATGGCGGTGTATCAGAGAGCCCCCCAAGCAATTCAATTGGATATTTCTACGGATCTACTCCAGAAAACCACAGCTATAGAAGTTCAAGGTTGAGCTCATCTCCTCATGGAATCCCTACTGGTAGCTCGCCTGTTGGTTCTGTGCCCAAATCTTTCCCACCATTTCAACACCCAAGTCATCAGCTTTTAGAGAAAAATAAATTCCAGCAGCAAAGGTACAATAAGTTCAAAAATCGATGCATCGCTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB001065             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGCACAGTCCTCTCATAAGCAGAGGTTCTTTCCTGGTAACTTTGCGAATAACACCAATAATAGATCTCACTATGGCGGTGTATCAGAGAGCCCCCCAAGCAATTCAATTGGATATTTCTACGGATCTACTCCAGAAAACCACAGCTATAGAAGTTCAAGGTTGAGCTCATCTCCTCATGGAATCCCTACTGTTAGCTCGCCTGTTGGTTCTGTGCCCAAATCTTTCCCACCATTTCAACACCCAAGTCATCAGCTTTTAGAGAAAAATAAATTCCAGCAGCAAAGGTACAATAAGTTCAAAAATCGATGCATCGCTGAACGCAAGAAGTTAGGGATCGGTTGCAGTGAGGAAATGAATTCGTTATATCGTTTTTGGTCGTATTATCTAAGAGATAATTTTAATGATGATATGTACAAACATTTTAAGAAGTTTGCACTAGATGACGCGGCAGCAAATTACAGATATGGACTTGAATGTCTCTTCAGATTTTATAGTTATGGTTTGGAGAAAAACTTCCAACGCAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF282204             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGGTCGTATTATCTAAGAGATAATTTTAATGATGATATGTACAAACATTTTAAGAAGTTTGCACTAGATGACGCGGCAGCAAATTACAGATATGGACTTGAATGTCTCTTCAGATTTTATAGTTATGGTTTGGAGAAAAACTTCCAACGCAATGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGACTCGAAAAATACTGGGCTTTCCACCATTTCCGAAATCAAGATAGCAGCCCCATTATCAAGCATCCAGAATTGGAGAGGCTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCACGGAAGGCAGCAGAGAAAGAAACTGGCAGCAGTACTGCTGCCGCCGCAGGCCATAACAAGGCTGATGCGAAGTAGGTCCTAGCATGGCATGAAATTNTTGGTGGTCATCCCACAAAAAGGAGAAAGTAGCAAAACCGTTTTTGTTTGGTGAAAAACTTAAGGATTTGAGTAGACACCTGTGCAGATTTTGTTCTCCCCTGCCGACGATAC                                                                                                                                                                 ]
[+] EMBL CB097159             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ggggggGGACTTGAATGTCTCTTCAGATTTTATAGTTATGGTTTGGAGAAAAACTTCCAACGCAATGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGACTCGAAAAATACTGGGCTTTCCACCATTTCCGAAATCAAGATAGCAGCCCCATTATCAAGCATCCAGAATTGGAGAGGCTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCACGGAAGGCAGCAGAGAAAGAAACTGGCAGCAGTACTGCTGCCGCCGCAGGCCATAACAAGGCTGATGCGAAGTAGGTCCTAGCATGGCATGAAATT TTGGTGGTCAACCCACAAAAAGGAGAAAGTAGCAAAACCGTTTTTGTTTGGTGAAAAACTTAAGGATTTGAGTAGACACCTGTGCAGATTTTGTTCTCCCCTGCCGACGATACTTGTGTGGCCCTGTCCAGGAAATTTTCCTCTCGCATTTTTTCCCATTACATTCCTGGCGCAGCGCCCTGTGGGATTTGTACATAAAGATAATAATTACTTGTTGATTAAATGGACAAATAATAGAGCCTGGAGTTAAAATGACACGGCATTGTCGTCTTGC]
[-] EMBL CB638533             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGACTCGAAAAATACTGGGCTTTCCACCATTTCCGAAATCAAGATAGCAGCCCCATTATCAAGCATCCAGAATTGGAGAGGCTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCACGGAAGGCAGCAGAGAAAGAAACTGGCAGCAGTACTGCTGCCGCCGCAGGCCATAACAAGGTTGATGCGAAGTAGGTCCTAGCATGGCATGAAATT TTGGTGGTCATCCCACAAAAAGGAGAAAGTAGCAAACCCGTTTTTGTTTGGTGAAAAACTTAAGGATTTGAGTAGACACCTGTGCAGATTTTGTTCTCCCCTGCCGACGATACTTGTGTGGCCTTGTCCAGGAAATTTTCCTCTCGCATTTTTTCCCATTACATTCCTGGCGCAGCGCCCTGTGGGATTTGTACATAAAGATAATAATTACTTGTTGATTAAATGGACAAATAATAGAGCCTGGAGTTAAAATGA                   ]




>consensus_11342#0
CACGCACGCAGAGTCGAGACGCGCACGCCACCCTGTCGCTCTCTCTCTCTCGCTCTCGCC
CTCGCCTCTCCCCTCCCCATCACCACCCAAAACCCTAGTTACCCCCACCCTCTCAAAACC
CTAACCCCACCTCACCACCCTCCCCGGCGGCGGCGGCCCTTGTGGCTGTGCACACATCAC
TCCACCGGATAAGCTCTAGCTATCTATCATCCAAAGCAGCTTACTAGTCTGTGCTCTCTC
TGTGTCGGAAGGCGGCGGCGGCGGCGCGGCGGCTGGTGGTGGTGGGCGGGGGAGGCGGCG
GTAGAGCGGTGGTATCTGGGCGTTTTGTGGCGGGGGCGGCTCGGGCGTCGGCGATGGAGG
AGCCGAATGTGGGCGGAGGGGCGGCGGCGGTGGTGGCGCCTGAGGGGGCGGATCCGGCTG
GCGGCGGCGGCGGTGGACCGGGCGCCCCCGCGTCTCCCTGGAGGAAGACCACGCCGCCGC
CTGTGGCGGGTGAGGCGGTGGTCATGGGGGCCAAGTCGTGGCCCGCGCTGGAGGAGGCTA
GGCAGAAGGTCGCCGCCGCGGAGGCCGCGGCGAGGCGCGGGGGCGGNCCAATGGCTGGCG
GCGGTGGCGAACGCAGCGAAGGGGGTGCGCAGGCGCAGCAGCCGGTCCCCTCCCCCGCCA
CAGTCGCAGGCACCTAATCGCACGCACAAGTTTGGTGCCCATGGAAATCCCGACAAGAAT
GATCAAGCATACCATAGAAGTGGCCCCAAGAGACGTTCTCCTGCTGCGAATGGGACTCCA
TCTTATCCTGCCGCGATGCCATATCACCAACATCCAGGGCAACCTTTTTACTACCCTGTT
ATTCCCAGTCCAGTGATACTACATGAATATCCTTACCCACCTTTTGCTGTTCCGGTTCCA
AGTCATGACCCGCATGCTGGAAAATCTGGATATGAGAATTCTATGCCTGCTTATGTTCCA
GTAGATCAAGCTGGTGGCAATGAAGGTAACCGGCCAGTGCCTCCACAACCAAGGGGAGAC
CTTCATGCTTGGAGGCCTCCTGTTGGTGCAAGACCCCAGCCTGGCCTTGAAGGCCGTGGC
CATTTTAATCACAATTGGCAGAATCCCCAGATGTTCGGTACCAGGGAAAACACAAGTGTA
CCACAAGGTGCTGGGCCAAGAGCTTTCATGAGACCAATGGCACATCTGCCTCACACTCTG
GGATACATAAATGGTCCACCATACCCTGGGCCAATGCCTCCCATGTATTATTACATGCCT
GCTGTACCCATGGAGCCGATGAGAGGTCCACCACGTTTTGTCCAAAACCAACCACCTCCT
CATCCTGTTTTATCTCCTGAATTAAGAGCTAAAATACTGACTCAAGTGGAGTACTATTTT
AGTGATAGTAATCTGGATCATGATAATTTTCTTAAATCTTTAATGGACGAACATGGCTGG
GTTCCAATTTCCAAAGTTGCAGACTTCAATCGGCTTAAGAAAATGACCACGGATATACAA
CTGATTGTAGAAGCATTGGCAGACTCAAGTCTTTTAGAAGTTCAGGATGGTAATATGAGG
CGGCGTTCTGACTGGTCAAAGTGGGTTTCCTTGTCTGGGACATCTCTTCCGAGTCCATCT
TCAACCAGTATGGATAACACTACTGGTGAATGTAATAAGGATGCTTATTCTGAAGATGAA
AAGAAGCCTCATCCTCGCAGCGTAGATTGTGTTGGTATGGGGGCTTCTGATGAGCCATCA
CATGATACACTCAGTAGTTCAGTCACTTCACTGAATAAGGGCTTATCAAACATTAGTATT
GATAATAAGCCTAAGAGCATTTCTGCATGCTCTCTGAACTCACAAAAACATGAAGCTGCT
TTTAGGACTGGTGATGTTAAAGTTCAGAAAGTAAACACAAAGATCAAAGTGCCTGATTCT
CAGAGGGAAAGAGGTTTCTGTAATGATTTCATAAGTGACTCTCCTAGCTTCAGCGGCGAT
CAAAGCACATTCTTGCTTGATGAGGAATTAGAATTGGAGCATGCAGAGCTTTCACATGAT
CTCTATTCGCACAAAAGGGTCGATGATGAGGAAGATGATTTTTATGTTGATGACCAAGAT
GTGAACAGGCTAATAATCGTTACGCAGGACGGACCTCAAGCATTTTCAAAAGAGGAAATA
TCAAGAATCAATGAGGGGTTATATTACTATGAGAATCACGCTTATAATCAAAGAAGTTCC
CAAGCTGGCACCATAGATATTGATTCTAAACCAGCTGGTGGTTCAAAGGGGAATCCCATT
AATATTGTAAACAATGGAATTGAAGATTCTGGACAGCCTATCCCACGAAGGAGGCACAAC
AGAGGCAATAGAAAAGCACAGTCCTCTCATAAGCAGAGGTTCTTTCCTGGTAACTTTGCG
AATAACACCAATAATAGATCTCACTATGGCGGTGTATCAGAGAGCCCCCCAAGCAATTCA
ATTGGATATTTCTACGGATCTACTCCAGAAAACCACAGCTATAGAAGTTCAAGGTTGAGC
TCATCTCCTCATGGAATCCCTACTGGTAGCTCGCCTGTTGGTTCTGTGCCCAAATCTTTC
CCACCATTTCAACACCCAAGTCATCAGCTTTTAGAGAAAAATAAATTCCAGCAGCAAAGG
TACAATAAGTTCAAAAATCGATGCATCGCTGAACGCAAGAAGTTAGGGATCGGTTGCAGT
GAGGAAATGAATTCGTTATATCGTTTTTGGTCGTATTATCTAAGAGATAATTTTAATGAT
GATATGTACAAACATTTTAAGAAGTTTGCACTAGATGACGCGGCAGCAAATTACAGATAT
GGACTTGAATGTCTCTTCAGATTTTATAGTTATGGTTTGGAGAAAAACTTCCAACGCAAT
GTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGA
CTCGAAAAATACTGGGCTTTCCACCATTTCCGAAATCAAGATAGCAGCCCCATTATCAAG
CATCCAGAATTGGAGAGGCTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCA
CGGAAGGCAGCAGAGAAAGAAACTGGCAGCAGTACTGCTGCCGCCGCAGGCCATAACAAG
GCTGATGCGAAGTAGGTCCTAGCATGGCATGAAATTTTGGTGGTCATCCCACAAAAAGGA
GAAAGTAGCAAAACCGTTTTTGTTTGGTGAAAAACTTAAGGATTTGAGTAGACACCTGTG
CAGATTTTGTTCTCCCCTGCCGACGATACTTGTGTGGCCTTGTCCAGGAAATTTTCCTCT
CGCATTTTTTCCCATTACATTCCTGGCGCAGCGCCCTGTGGGATTTGTACATAAAGATAA
TAATTACTTGTTGATTAAATGGACAAATAATAGAGCCTGGAGTTAAAATGACACGGCATT
GTCGTCTTGC

consensusID : consensus_11342#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 977
fasta sequence 
                              [AAGAAGTTAGGGATTGGTTGCAGTGAGGAAATGAATTCGTTATATCGTTTTTGGTCGTATTATCTGAGAGATAATTTTAATGATGATATGTACAAACATTTTAAGAAGTTTGCACTAGATGACGCGGCAGCAAATTACAGATATGGACTTGAATGTCTCTTCAGATTTTATAGTTATGGTTTGGAGAAAAACTTCCAACGCAATGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGACTCGAAAAATACTGGGCTTTCCACCATTTCCGAAATCAAGATAGCAGCCCCATTATCAAGCATCCAGAATTGGAGAGGCTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCACGGAAGGCAGCAGAGAAAGAAACTGGCAGCAGTAGTGCTGCCGCCGCAGGCCATAACAAGGCTCATGCGAAGTAGGTCCTAGCATGGCATGAAATTTTGGTGGTCATCCCACAAAAAGGAGAAAGTAGCAAAACCGTTTTTGTTTGGTGAAAACTTAAGGTTTTGAGTAGACACCTGTGCAGATTTTGTTCTCCCCTGCCGACGATACTTGTGTGGACTTGTCCAGGAAATGTGTCCTTTGCATTGTTGGCCCTTACATTGCTGGCGCAACGCCCTGTGGGATTTGTTCATAAAGATATTATTGCCTGGTGGTTGAATGGACAAATTATCGACCCTCGGGTGGATTCGCACAAAATACAAGACTAGTTTACGTTAATGTTGCCGTCATGCTTGTTCTGTGTCGTCGTTGGCGCTCGCCTTCCCCCTACNCCATCAAAATGTTCTCCTATCTCGTTTAATGTGACTGGTATCGAACTACCTACGGTGTGCTTCTTTTAGAGCTTCTCGAGTTATAGTATTTTACGTATTGAAAATGTCCGTCTCCCCTACTATTTTATGTGCGCGTGATAGTGGCTGTTTTATTCTTTGTCTGC]

[+] EMBL BE039722             [AAGAAGTTAGGGATTGGTTGCAGTGAGGAAATGAATTCGTTATATCGTTTTTGGTCGTATTATCTGAGAGATAATTTTAATGATGATATGTACAAACATTTTAAGAAGTTTGCACTAGATGACGCGGCAGCAAATTACAGATATGGACTTGAATGTCTCTTCAGATTTTATAGTTATGGTTTGGAGAAAAACTTCCAACGCAATGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGACTCGAAAAATACTGGGCTTTCCACCATTTCCGAAATCAAGATAGCAGCCCCATTATCAAGCATCCAGAATTGGAGAGGCTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCACGGAAGGCAGCAGAGAAAGAAACTGGCAGCAGTAGTGCTGCCGCCGCAGGCCATAACAAGGCTCATGCGAAGTAGGTCCTAGCATGGCATGAAATTTTGGTGGTCATCCCACAAAAAGGAGAAAGTAGCAAAACCGTTTTTGTTTGGTGAAAACTTAAGGTTTTGAGTAGACACCTGTGCAGATTTTGTTCTCCCCTGCCGACGATACTTGTGTGGACTTGTCCAGGAAATGTGTCCTTTGCATTGTTGGCCCTTACATTGCTGGCGCAACGCCCTGTGGGATTTGTTCATAAAGATATTATTGCCTGGTGGTTGAATGGACAAATTATCGACCCTCGGGTGGATTCGCACAAAATACAAGACTAGTTTACGTTAATGTTGCCGTCATGCTTGTTCTGTGTCGTCGTTGGCGCTCGCCTTCCCCCTACNCCATCAAAATGTTCTCCTATCTCGTTTAATGTGACTGGTATCGAACTACCTACGGTGTGCTTCTTTTAGAGCTTCTCGAGTTATAGTATTTTACGTATTGAAAATGTCCGTCTCCCCTACTATTTTATGTGCGCGTGATAGTGGCTGTTTTATTCTTTGTCTGC]




>consensus_11342#1
AAGAAGTTAGGGATTGGTTGCAGTGAGGAAATGAATTCGTTATATCGTTTTTGGTCGTAT
TATCTGAGAGATAATTTTAATGATGATATGTACAAACATTTTAAGAAGTTTGCACTAGAT
GACGCGGCAGCAAATTACAGATATGGACTTGAATGTCTCTTCAGATTTTATAGTTATGGT
TTGGAGAAAAACTTCCAACGCAATGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTC
CATCACAAGGGTGATCTTTATGGACTCGAAAAATACTGGGCTTTCCACCATTTCCGAAAT
CAAGATAGCAGCCCCATTATCAAGCATCCAGAATTGGAGAGGCTCCTAAAGGAGGAGTTC
CGAACCATCGAGGATTTCAAGGCACGGAAGGCAGCAGAGAAAGAAACTGGCAGCAGTAGT
GCTGCCGCCGCAGGCCATAACAAGGCTCATGCGAAGTAGGTCCTAGCATGGCATGAAATT
TTGGTGGTCATCCCACAAAAAGGAGAAAGTAGCAAAACCGTTTTTGTTTGGTGAAAACTT
AAGGTTTTGAGTAGACACCTGTGCAGATTTTGTTCTCCCCTGCCGACGATACTTGTGTGG
ACTTGTCCAGGAAATGTGTCCTTTGCATTGTTGGCCCTTACATTGCTGGCGCAACGCCCT
GTGGGATTTGTTCATAAAGATATTATTGCCTGGTGGTTGAATGGACAAATTATCGACCCT
CGGGTGGATTCGCACAAAATACAAGACTAGTTTACGTTAATGTTGCCGTCATGCTTGTTC
TGTGTCGTCGTTGGCGCTCGCCTTCCCCCTACNCCATCAAAATGTTCTCCTATCTCGTTT
AATGTGACTGGTATCGAACTACCTACGGTGTGCTTCTTTTAGAGCTTCTCGAGTTATAGT
ATTTTACGTATTGAAAATGTCCGTCTCCCCTACTATTTTATGTGCGCGTGATAGTGGCTG
TTTTATTCTTTGTCTGC

consensusID : consensus_11342#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 483
fasta sequence 
                              [CCATTTCCGAAATCAAGAAAGCAGCCCCCTTATCAAGCATCCAGAATTGGAGAGGGTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCCCGGAAGGCACCAAAAAAAAAAACTGGCACCAGTATTGTTTCCCCCCGCAGGCCATAACAAGGGTTATGGGAAGTAGGTCCTAGCATGGCATGAAATTTTGGGGGTCTTCCCCCAAAAAGGAGAAAGTAGCAAACCCGTTTTTGTTTGGTGAAAAACTTAAGGATTTGAGTAAACCCCTGTGCAGATTTTGTTTTCCCCCCCCGACAAAAATTGTGTGGCCTTGTCCAGGAAATTTTCCTTTTGCATTTTTTCCCATTACATTTCTGGGGCAGGGCCCTGTGGGATTTGTACAAAAAAAAAAAAATTACTTGTTGATTAAAAGGGCAAAAAATAAAGCCTGGGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF282203             [CCATTTCCGAAATCAAGAAAGCAGCCCCCTTATCAAGCATCCAGAATTGGAGAGGGTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCCCGGAAGGCACCAAAAAAAAAAACTGGCACCAGTATTGTTTCCCCCCGCAGGCCATAACAAGGGTTATGGGAAGTAGGTCCTAGCATGGCATGAAATTTTGGGGGTCTTCCCCCAAAAAGGAGAAAGTAGCAAACCCGTTTTTGTTTGGTGAAAAACTTAAGGATTTGAGTAAACCCCTGTGCAGATTTTGTTTTCCCCCCCCGACAAAAATTGTGTGGCCTTGTCCAGGAAATTTTCCTTTTGCATTTTTTCCCATTACATTTCTGGGGCAGGGCCCTGTGGGATTTGTACAAAAAAAAAAAAATTACTTGTTGATTAAAAGGGCAAAAAATAAAGCCTGGGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11342#2
CCATTTCCGAAATCAAGAAAGCAGCCCCCTTATCAAGCATCCAGAATTGGAGAGGGTCCT
AAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCCCGGAAGGCACCAAAAAAAAAAAC
TGGCACCAGTATTGTTTCCCCCCGCAGGCCATAACAAGGGTTATGGGAAGTAGGTCCTAG
CATGGCATGAAATTTTGGGGGTCTTCCCCCAAAAAGGAGAAAGTAGCAAACCCGTTTTTG
TTTGGTGAAAAACTTAAGGATTTGAGTAAACCCCTGTGCAGATTTTGTTTTCCCCCCCCG
ACAAAAATTGTGTGGCCTTGTCCAGGAAATTTTCCTTTTGCATTTTTTCCCATTACATTT
CTGGGGCAGGGCCCTGTGGGATTTGTACAAAAAAAAAAAAATTACTTGTTGATTAAAAGG
GCAAAAAATAAAGCCTGGGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11342#0      CACGCACGCAGAGTCGAGACGCGCACGCCACCCTGTCGCTCTCTCTCTCTCGCTCTCGCC 60
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CTCGCCTCTCCCCTCCCCATCACCACCCAAAACCCTAGTTACCCCCACCCTCTCAAAACC 120
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CTAACCCCACCTCACCACCCTCCCCGGCGGCGGCGGCCCTTGTGGCTGTGCACACATCAC 180
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      TCCACCGGATAAGCTCTAGCTATCTATCATCCAAAGCAGCTTACTAGTCTGTGCTCTCTC 240
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      TGTGTCGGAAGGCGGCGGCGGCGGCGCGGCGGCTGGTGGTGGTGGGCGGGGGAGGCGGCG 300
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      GTAGAGCGGTGGTATCTGGGCGTTTTGTGGCGGGGGCGGCTCGGGCGTCGGCGATGGAGG 360
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      AGCCGAATGTGGGCGGAGGGGCGGCGGCGGTGGTGGCGCCTGAGGGGGCGGATCCGGCTG 420
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      GCGGCGGCGGCGGTGGACCGGGCGCCCCCGCGTCTCCCTGGAGGAAGACCACGCCGCCGC 480
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CTGTGGCGGGTGAGGCGGTGGTCATGGGGGCCAAGTCGTGGCCCGCGCTGGAGGAGGCTA 540
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      GGCAGAAGGTCGCCGCCGCGGAGGCCGCGGCGAGGCGCGGGGGCGGNCCAATGGCTGGCG 600
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      GCGGTGGCGAACGCAGCGAAGGGGGTGCGCAGGCGCAGCAGCCGGTCCCCTCCCCCGCCA 660
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CAGTCGCAGGCACCTAATCGCACGCACAAGTTTGGTGCCCATGGAAATCCCGACAAGAAT 720
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      GATCAAGCATACCATAGAAGTGGCCCCAAGAGACGTTCTCCTGCTGCGAATGGGACTCCA 780
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      TCTTATCCTGCCGCGATGCCATATCACCAACATCCAGGGCAACCTTTTTACTACCCTGTT 840
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      ATTCCCAGTCCAGTGATACTACATGAATATCCTTACCCACCTTTTGCTGTTCCGGTTCCA 900
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      AGTCATGACCCGCATGCTGGAAAATCTGGATATGAGAATTCTATGCCTGCTTATGTTCCA 960
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      GTAGATCAAGCTGGTGGCAATGAAGGTAACCGGCCAGTGCCTCCACAACCAAGGGGAGAC 1020
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CTTCATGCTTGGAGGCCTCCTGTTGGTGCAAGACCCCAGCCTGGCCTTGAAGGCCGTGGC 1080
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CATTTTAATCACAATTGGCAGAATCCCCAGATGTTCGGTACCAGGGAAAACACAAGTGTA 1140
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CCACAAGGTGCTGGGCCAAGAGCTTTCATGAGACCAATGGCACATCTGCCTCACACTCTG 1200
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      GGATACATAAATGGTCCACCATACCCTGGGCCAATGCCTCCCATGTATTATTACATGCCT 1260
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      GCTGTACCCATGGAGCCGATGAGAGGTCCACCACGTTTTGTCCAAAACCAACCACCTCCT 1320
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CATCCTGTTTTATCTCCTGAATTAAGAGCTAAAATACTGACTCAAGTGGAGTACTATTTT 1380
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      AGTGATAGTAATCTGGATCATGATAATTTTCTTAAATCTTTAATGGACGAACATGGCTGG 1440
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      GTTCCAATTTCCAAAGTTGCAGACTTCAATCGGCTTAAGAAAATGACCACGGATATACAA 1500
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CTGATTGTAGAAGCATTGGCAGACTCAAGTCTTTTAGAAGTTCAGGATGGTAATATGAGG 1560
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CGGCGTTCTGACTGGTCAAAGTGGGTTTCCTTGTCTGGGACATCTCTTCCGAGTCCATCT 1620
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      TCAACCAGTATGGATAACACTACTGGTGAATGTAATAAGGATGCTTATTCTGAAGATGAA 1680
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      AAGAAGCCTCATCCTCGCAGCGTAGATTGTGTTGGTATGGGGGCTTCTGATGAGCCATCA 1740
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CATGATACACTCAGTAGTTCAGTCACTTCACTGAATAAGGGCTTATCAAACATTAGTATT 1800
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      GATAATAAGCCTAAGAGCATTTCTGCATGCTCTCTGAACTCACAAAAACATGAAGCTGCT 1860
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      TTTAGGACTGGTGATGTTAAAGTTCAGAAAGTAAACACAAAGATCAAAGTGCCTGATTCT 1920
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CAGAGGGAAAGAGGTTTCTGTAATGATTTCATAAGTGACTCTCCTAGCTTCAGCGGCGAT 1980
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CAAAGCACATTCTTGCTTGATGAGGAATTAGAATTGGAGCATGCAGAGCTTTCACATGAT 2040
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CTCTATTCGCACAAAAGGGTCGATGATGAGGAAGATGATTTTTATGTTGATGACCAAGAT 2100
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      GTGAACAGGCTAATAATCGTTACGCAGGACGGACCTCAAGCATTTTCAAAAGAGGAAATA 2160
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      TCAAGAATCAATGAGGGGTTATATTACTATGAGAATCACGCTTATAATCAAAGAAGTTCC 2220
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CAAGCTGGCACCATAGATATTGATTCTAAACCAGCTGGTGGTTCAAAGGGGAATCCCATT 2280
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      AATATTGTAAACAATGGAATTGAAGATTCTGGACAGCCTATCCCACGAAGGAGGCACAAC 2340
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      AGAGGCAATAGAAAAGCACAGTCCTCTCATAAGCAGAGGTTCTTTCCTGGTAACTTTGCG 2400
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      AATAACACCAATAATAGATCTCACTATGGCGGTGTATCAGAGAGCCCCCCAAGCAATTCA 2460
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      ATTGGATATTTCTACGGATCTACTCCAGAAAACCACAGCTATAGAAGTTCAAGGTTGAGC 2520
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      TCATCTCCTCATGGAATCCCTACTGGTAGCTCGCCTGTTGGTTCTGTGCCCAAATCTTTC 2580
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      CCACCATTTCAACACCCAAGTCATCAGCTTTTAGAGAAAAATAAATTCCAGCAGCAAAGG 2640
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------------------------------
                                                                                   

consensus_11342#0      TACAATAAGTTCAAAAATCGATGCATCGCTGAACGCAAGAAGTTAGGGATCGGTTGCAGT 2700
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ------------------------------------AAGAAGTTAGGGATTGGTTGCAGT 24
                                                                                   

consensus_11342#0      GAGGAAATGAATTCGTTATATCGTTTTTGGTCGTATTATCTAAGAGATAATTTTAATGAT 2760
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      GAGGAAATGAATTCGTTATATCGTTTTTGGTCGTATTATCTGAGAGATAATTTTAATGAT 84
                                                                                   

consensus_11342#0      GATATGTACAAACATTTTAAGAAGTTTGCACTAGATGACGCGGCAGCAAATTACAGATAT 2820
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      GATATGTACAAACATTTTAAGAAGTTTGCACTAGATGACGCGGCAGCAAATTACAGATAT 144
                                                                                   

consensus_11342#0      GGACTTGAATGTCTCTTCAGATTTTATAGTTATGGTTTGGAGAAAAACTTCCAACGCAAT 2880
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      GGACTTGAATGTCTCTTCAGATTTTATAGTTATGGTTTGGAGAAAAACTTCCAACGCAAT 204
                                                                                   

consensus_11342#0      GTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGA 2940
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      GTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGA 264
                                                                                   

consensus_11342#0      CTCGAAAAATACTGGGCTTTCCACCATTTCCGAAATCAAGATAGCAGCCCCATTATCAAG 3000
consensus_11342#2      -----------------------CCATTTCCGAAATCAAGAAAGCAGCCCCCTTATCAAG 37
consensus_11342#1      CTCGAAAAATACTGGGCTTTCCACCATTTCCGAAATCAAGATAGCAGCCCCATTATCAAG 324
                                              ****************** ********* ********

consensus_11342#0      CATCCAGAATTGGAGAGGCTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCA 3060
consensus_11342#2      CATCCAGAATTGGAGAGGGTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCC 97
consensus_11342#1      CATCCAGAATTGGAGAGGCTCCTAAAGGAGGAGTTCCGAACCATCGAGGATTTCAAGGCA 384
                       ****************** **************************************** 

consensus_11342#0      CGGAAGGCAGCAGAGAAAGAAACTGGCAGCAGTACTGCTGCCGCC-GCAGGCCATAACAA 3119
consensus_11342#2      CGGAAGGCACCAAAAAAAAAAACTGGCACCAGTATTGTTTCCCCCCGCAGGCCATAACAA 157
consensus_11342#1      CGGAAGGCAGCAGAGAAAGAAACTGGCAGCAGTAGTGCTGCCGCC-GCAGGCCATAACAA 443
                       ********* ** * *** ********* ***** ** * ** ** **************

consensus_11342#0      GGCTGATGCGAAGTAGGTCCTAGCATGGCATGAAATTTTGGTGGTCATCCCACAAAAAGG 3179
consensus_11342#2      GGGTTATGGGAAGTAGGTCCTAGCATGGCATGAAATTTTGGGGGTCTTCCCCCAAAAAGG 217
consensus_11342#1      GGCTCATGCGAAGTAGGTCCTAGCATGGCATGAAATTTTGGTGGTCATCCCACAAAAAGG 503
                       ** * *** ******************************** **** **** ********

consensus_11342#0      AGAAAGTAGCAAAACCGTTTTTGTTTGGTGAAAAACTTAAGGATTTGAGTAGACACCTGT 3239
consensus_11342#2      AGAAAGTAGCAAACCCGTTTTTGTTTGGTGAAAAACTTAAGGATTTGAGTAAACCCCTGT 277
consensus_11342#1      AGAAAGTAGCAAAACCGTTTTTGTTTGGTGAAAA-CTTAAGGTTTTGAGTAGACACCTGT 562
                       ************* ******************** ******* ******** ** *****

consensus_11342#0      GCAGATTTTGTTCTCCCCTGCCGACGATACTTGTGTGGCCTTGTCCAGGAAATTTTCCTC 3299
consensus_11342#2      GCAGATTTTGTTTTCCCCCCCCGACAAAAATTGTGTGGCCTTGTCCAGGAAATTTTCCTT 337
consensus_11342#1      GCAGATTTTGTTCTCCCCTGCCGACGATACTTGTGTGGACTTGTCCAGGAAATGTGTCCT 622
                       ************ *****  ***** * * ******** ************** *  *  

consensus_11342#0      TCGCATTTTTTCCCATTACATTCCTGGCGCAGCGCCCTGTGGGATTTGTACATAAAGATA 3359
consensus_11342#2      TTGCATTTTTTCCCATTACATTTCTGGGGCAGGGCCCTGTGGGATTTGTACAAAAAAAAA 397
consensus_11342#1      TTGCATTGTTGGCCCTTACATTGCTGGCGCAACGCCCTGTGGGATTTGTTCATAAAGATA 682
                       * ***** **  ** ******* **** ***  **************** ** *** * *

consensus_11342#0      ATAATTACTTGTTGATTAAATGGACAAATAATAGAGCCTGGAGTTAAAATGACACGGCAT 3419
consensus_11342#2      AAAATTACTTGTTGATTAAAAGGGCAAAAAATAAAGCCTGGGGTTAAAAAAAAAAAAAAA 457
consensus_11342#1      -TTATTGCCTGGTGGTTGAATGGACAAATTATCGACCCTCGGGT-GGATTCGCACAAAAT 740
                          *** * ** ** ** ** ** ****  **  * *** * **   *     *    * 

consensus_11342#0      TGTCGTCTTGC------------------------------------------------- 3430
consensus_11342#2      AAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------------- 483
consensus_11342#1      ACAAGACTAGTTTACGTTAATGTTGCCGTCATGCTTGTTCTGTGTCGTCGTTGGCGCTCG 800
                                                                                   

consensus_11342#0      ------------------------------------------------------------
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      CCTTCCCCCTACNCCATCAAAATGTTCTCCTATCTCGTTTAATGTGACTGGTATCGAACT 860
                                                                                   

consensus_11342#0      ------------------------------------------------------------
consensus_11342#2      ------------------------------------------------------------
consensus_11342#1      ACCTACGGTGTGCTTCTTTTAGAGCTTCTCGAGTTATAGTATTTTACGTATTGAAAATGT 920
                                                                                   

consensus_11342#0      ---------------------------------------------------------
consensus_11342#2      ---------------------------------------------------------
consensus_11342#1      CCGTCTCCCCTACTATTTTATGTGCGCGTGATAGTGGCTGTTTTATTCTTTGTCTGC 977


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)