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Oryza sativa
cluster # 11632 cluster # 11632       Sequences # 9       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11632#0 length = 2220 sequences # 7  
 consensus_11632#1 length = 733 sequences # 1  
consensus_11632#2 length = 509 sequences # 1  
consensusID : consensus_11632#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2220
fasta sequence 
                              [GACAAATTCGTCTCCCTCGTTGGAAGTGGAGGCGCGGAGGCGGAAGCTTTTCCTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGAAGGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGAAGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCATTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTGTTTTATCCTTGTTTCTAATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAAAGTTCTTGATTGGTCTCATTCTGATGGTTCCAGTATATGCTGTTCAATCATTCTTCTCATTACTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCCATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGAAAGTACAATCAGATTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTATGATTATGGTATTGTGAAGCATCCTTTCCCATTAAACTGGTTTATGAGAAATTGGTACCTTGGTCCTGATTTTTACCATGCTGTGAAGGTTGGGATTGTGCAATATATGATACTGAAGCCTATTTGTGCCATCTTGGCAATTTTTATGCAACTTATTGGGATCTATGGGGAAGGAAAATTTGCATGGAGATACGGGTACCCATATTTGGCCATTGTCCTAAATTTCAGCCAGACATGGGCATTATAC-TGTCTAATACAATTTTATACTGCTACCAAGGAGAAGTTGGAACCTATTAAGCCCCTGTCTAAGTTTCTAACCTTCAAATCCATTGTATTTTTGACATGGTGGCAAGGTATTGCTGTTGCATTTCTTTTTTCAACTGGGCTTTTTAAAGGACATTTGGCGCAAAGATTTCAAACACGTATCCAGGATTACATCATATGCCTTGAGATGGGGGTGGCTGCAGTGGTTCATTTGAAAGTATTTCCAGCTAAACCTTACAGACGTGGGGAGAGAAGTGTTAGCAATGTTGCTGTGATGTCTGATTATGCATCTCTGGGAGCTTCAGATCCTGAAGAAGAACGAGAGATTGACAATGTAGCAATCATGCAAGCTGCTCGTCCTGATTCCAGGGACCGGCGATTGAGTTTCCCTCAGAGTGTTCGCGATGTCGTTTTAGGAAGTGGTGAAATTATGGTTGATGATGTCAAATATACAGTTTCCCACGTCGTGGAGCCTGTGGAGCGGAGTTTTTCCAAGATAAACCGGACACTTCATCAAATCTCCGAAAACGTCAAGCAGCTTGAGAAGCAAAAGAGAAAGGCTAAGGATGATAGTGATGTTCCCCTTGAACCATTTTCAGAGGAATTCGCAGAAGCTCATGACAATGTTTTCGGAGGTAGTGTTAGCGACAGTGGATTAGCTAGGAAAAAGTACAAGAACACCAAAAGGGCACCGTCGTCTCTGAAACCGTTCGAGTTCAGATTAGGTAGATGGTTCCAGTAGTCAGCCAGTTGTGGTTTATTGGGTTTTGTTTCTGACCAACAGGGAGCTAACCTCAAATCCAGCAGTTTATACAACATAGGACATACTGGGGGCAAAGCGATGACATTTCCGAAAACTAACAGTTCACAGGAGGATGATGTGCACTGGAGCTTCAGTTTCCTTCATTAACTTTCCTCTTGTGTTTATACAGCTCGTCCTGGCCCTTGTCAATTTCAGGAGGCAGTTACTAGAATTTTTTTTGTCATGAGAGCAGCCTTGTTTAGTCTAGTTAACTACACTTACTACAGGCAAAGAAATATTAAGCCGCGGCAAAGCAACTACTACTGAATACTGATGTAACCCTCCTTAAGTTTCTTTGAATTAACATGCATAGAAGGGATACATTTGTAAACTGATGAACAACATGTTTCAAATCGGTAAAGTGATAATAGCACCAATGTGAAG]

[+] EMBL AK069607             [GACAAATTCGTCTCCCTCGTTGGAAGTGGAGGCGCGGAGGCGGAAGCTTTTCCTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGAAGGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGAAGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCATTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTGTTTTATCCTTGTTTCTAATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAAAGTTCTTGATTGGTCTCATTCTGATGGTTCCAGTATATGCTGTTCAATCATTCTTCTCATTACTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCCATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGAAAGTACAATCAGATTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTATGATTATGGTATTGTGAAGCATCCTTTCCCATTAAACTGGTTTATGAGAAATTGGTACCTTGGTCCTGATTTTTACCATGCTGTGAAGGTTGGGATTGTGCAATATATGATACTGAAGCCTATTTGTGCCATCTTGGCAATTTTTATGCAACTTATTGGGATCTATGGGGAAGGAAAATTTGCATGGAGATACGGGTACCCATATTTGGCCATTGTCCTAAATTTCAGCCAGACATGGGCATTATAC TGTCTAATACAATTTTATACTGCTACCAAGGAGAAGTTGGAACCTATTAAGCCCCTGTCTAAGTTTCTAACCTTCAAATCCATTGTATTTTTGACATGGTGGCAAGGTATTGCTGTTGCATTTCTTTTTTCAACTGGGCTTTTTAAAGGACATTTGGCGCAAAGATTTCAAACACGTATCCAGGATTACATCATATGCCTTGAGATGGGGGTGGCTGCAGTGGTTCATTTGAAAGTATTTCCAGCTAAACCTTACAGACGTGGGGAGAGAAGTGTTAGCAATGTTGCTGTGATGTCTGATTATGCATCTCTGGGAGCTTCAGATCCTGAAGAAGAACGAGAGATTGACAATGTAGCAATCATGCAAGCTGCTCGTCCTGATTCCAGGGACCGGCGATTGAGTTTCCCTCAGAGTGTTCGCGATGTCGTTTTAGGAAGTGGTGAAATTATGGTTGATGATGTCAAATATACAGTTTCCCACGTCGTGGAGCCTGTGGAGCGGAGTTTTTCCAAGATAAACCGGACACTTCATCAAATCTCCGAAAACGTCAAGCAGCTTGAGAAGCAAAAGAGAAAGGCTAAGGATGATAGTGATGTTCCCCTTGAACCATTTTCAGAGGAATTCGCAGAAGCTCATGACAATGTTTTCGGAGGTAGTGTTAGCGACAGTGGATTAGCTAGGAAAAAGTACAAGAACACCAAAAGGGCACCGTCGTCTCTGAAACCGTTCGAGTTCAGATTAGGTAGATGGTTCCAGTAGTCAGCCAGTTGTGGTTTATTGGGTTTTGTTTCTGACCAACAGGGAGCTAACCTCAAATCCAGCAGTTTATACAACATAGGACATACTGGGGGCAAAGCGATGACATTTCCGAAAACTAACAGTTCACAGGAGGATGATGTGCACTGGAGCTTCAGTTTCCTTCATTAACTTTCCTCTTGTGTTTATACAGCTCGTCCTGGCCCTTGTCAATTTCAGGAGGCAGTTACTAGAATTTTTTTTGTCATGAGAGCAGCCTTGTTTAGTCTAGTTAACTACACTTACTACAGGCAAAGAAATATTAAGCCGCGGCAAAGCAACTACTACTGAATACTGATGTAACCCTCCTTAAGTTTCTTTGAATTAACATGCATAGAAGGGATACATTTGTAAACTGATGAACAACATGTTTCAAATCGGTAAAGTGATAATAGCACCAATGTGAAG]
[+] EMBL CK085293             [          TCTCCCTCGTTGGAAGTGGAGGCGCGGAGGCGGAAGCTTTTCCTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGAAGGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGAAGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCATTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTGTTTTATCCTTGTTTCTAATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAAAGTTCTTGATTGGTCTCATTCTGATGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB664781             [           CTCCCTCGTTGGAAGTGGAGGCGCGGAGGCGGAAGCTTTTCCTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGAAGGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGAAGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTTTTTTTCGTGTTAATACATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCATTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTGTTTTATCCTTGTTTCTAATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAAAGTTCTTGATTGGTCTCATTCTGATGGTTCCAGTATATGCTGTTCAATCATTCTTCTCATTACTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCCATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGAAAGTACAATCAGATTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTATGATTATGGTATTGTGAAGCATCCTTTCCCATTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB672416             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATATCCTACTGAAGCCTATTTGTGCCATCTTGGCAATTTTTATGCAACTTATTGGGATCTATGGGGAAGGAAAATTTGCATGGAGATACGGGTACCCATATTTGGCCATTGTCCTAAATTTCAGCCAGACATGGGCATTATAC TGTCTAATACAATTTTATACTGCTACCAAGGAGAAGTTGGAACCTATTAAGCCCCTGTCTAAGTTTCTAACCTTCAAATCCATTGTATTTTTGACATGGTGGCAAGGTATTGCTGTTGCATTTCTTTTTTCAACTGGGCTTTTTAAAGGACATTTGGCGCAAAGATTTCAAACACGTATCCAGGATTACATCATATGCCTTGAGATGGGGGTGGCTGCAGTGGTTCATTTGAAAGTATTTCCAGCTAAACCTTACAGACGTGGGGAGAGAAGTGTTAGCAATGTTGCTGTGATGTCTGATTATGCATCTCTGGGAGCTTCAGATCCTGAAGAAGAACGAGAGATTGACAATGTAGCAATCATGCAAGCTGCTCGTCCTGATTCCAGGGACCGGCGATTGAGTTTCCCTCAGAGTGTTCGCGATGTCGTTTTAGGAAGTGGTGAAATTATGGTTGATGATGTCAAATATACAGTTTCCCACGTCGTGGAGCCTGTGGAGCGGAGTTTTTCCAAGATAAACCGGACACTTCATCAAATCTCCGAAAACGTCAAGCAGCTTGAGAAGCAAAAGAGAAAGGCTAAGGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA305620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGCCATTGTCCTAAATTTCAGCCAGACATGGGCATTATACTTGTCTAATACAATTTTATACTGCTACCAAGGAGAAGTTGGAACCTATTAAGCCCCTGTCTAAGTTTCTAACCTTCAAATCCATTGTATTTTTGACATGGTGGCAAGGTATTGCTGTTGCATTTCTTTTTTCAACTGGGC TTTTAAAGGACATTTGGCGCAAAGATTTTAAACACGTATCCAGGATTACATCATATGCCTTGAGATGGGGGTGACTGCAGTGGTTCATTTGAAAGTATTTCCAGCTAAACCTTACAGACGTGGGGAGAGAAGTGTTAGCAATGTTGCTGTGATGTCTGATTATGCATCTCTGGGAGCTTCAGATCCTGAAGAAGAACGAGAGATTGACAATGTAGCAATCATGCAAGCTGCTCGTCCTGATTCCAGGGACCGGCNATTGAGTTTCCCTCAGAGTGTTCGCGATGTCGNTGTAGGAAGTGGTGAAATTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB672417             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCTCAGAGTGTTCGCGATGTCGTTTTAGGAAGTGGTGAAATTATGGTTGATGATGTCAAATATACAGTTTCCCACGTCGTGGAGCCTGTGGAGCGGAGTTTTTCCAAGATAAACCGGACACTTCATCAAATCTCCGAAAACGTCAAGCAGCTTGAGAAGCAAAAGAGAAAGGCTAAGGATGATAGTGATGTTCCCCTTGAACCATTTTCAGAGGAATTCGCAGAAGCTCATGACAATGTTTTCGGAGGTAGTGTTAGCGACAGTGGATTAGCTAGGAAAAAGTACAAGAACACCAAAAGGGCACCGTCGTCTCTGAAACCGTTCGAGTTCAGATTAGGTAGATGGTTCCAGTAGTCAGCCAGTTGTGGTTTATTGGGTTTTGTTTCTGACCAACAGGGAGCTAACCTCAAATCCAGCAGTTTATACAACATAGGACATACTGGGGGCAAAGCGATGACATTTCCGAAAACTAACAGTTCACAGGAGGATGATGTGCACTGGAGCTTCAGTTTCCTTCATTAACTTTCCTCTTGTGTTTATACAGCTCGTCCTGGCCCTTGTCAATTTCAGGAGGCAGTTACTAGAATTTTTTTTGTCATGAGAGCAGCCTTGTTTAGTCTAGTTAACTACACTTACTACAGGCAAAGAAATATTAAGCCGCGGCAAAGCAACTACTACTGAATACTGATGTAACCCTCCTTAAGTTTCTTTGAATTAACATGCATAGAAGGGATACATTTGTAAACTGATGAACAACATGTTTCAAATCGGTAAAGTGATAATAGCACCAATGTGAAG]
[-] EMBL CB664782             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGTGAAATTATGGTTGATGATGTCAAATATACAGTTTCCCACGTCGTGGAGCCTGTGGAGCGGAGTTTTTCCAAGATAAACCGGACACTTCATCAAATCTCCGAAAACGTCAAGCAGCTTGAGAAGCAAAAGAGAAAGGCTAAGGATGATAGTGATGTTCCCCTTGAACCATTTTCAGAGGAATTCGCAGAAGCTCATGACAATGTTTTCGGAGGTAGTGTTAGCGACAGTGGATTAGCTAGGAAAAAGTACAAGAACCCCAAAAGGGCCCCGTCGTTTTTGAAACCGTTCGAGTTCAGATTAGGTAGATGGTTCCAGTAGTCAGCCAGTTGTGGTTTATTGGGTTTTGTTTTTGACCAACAGGGAGCTAACCTCAAATCCAGCAGTTTATACAACATAGGACATACTGGGGGCAAAGCGATGACATTTCCGAAAACTAACAGTTCACAGGAGGATGATGTGCACTGGAGCTTCAGTTTCCTTCATTAACTTTCCTCTTGTGTTTATACAGCTCGTCCTGGCCCTTGTCAATTTCAGGAGGCAGTTACTAGAATTTTTTTTGTCATGAGAGCAGCCTTGTTTAGTTTAGTTAACTACACTTACTACAGGCAAAGAAATATTAAGCCGCGGCAAAGCAACTACTACTGAATACTGATGTAACCCTCCTTAAGTTTCTTTGAATTAACATGCATAGAAGGGATACATTTGTAAACTGATGAACAACATGTTTCTAAAAGGGAAAGTGATAATAGCCCCA        ]




>consensus_11632#0
GACAAATTCGTCTCCCTCGTTGGAAGTGGAGGCGCGGAGGCGGAAGCTTTTCCTCCTCCT
CTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGAAG
GAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAA
GAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGA
AGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTG
TCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGC
AGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCA
TTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTGTTTTATCC
TTGTTTCTAATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAAAGTTCTTG
ATTGGTCTCATTCTGATGGTTCCAGTATATGCTGTTCAATCATTCTTCTCATTACTGAAC
TCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCCATGTAT
TGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGAAAGTACAATCAGATTCATG
GAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTATGATTATGGT
ATTGTGAAGCATCCTTTCCCATTAAACTGGTTTATGAGAAATTGGTACCTTGGTCCTGAT
TTTTACCATGCTGTGAAGGTTGGGATTGTGCAATATATGATACTGAAGCCTATTTGTGCC
ATCTTGGCAATTTTTATGCAACTTATTGGGATCTATGGGGAAGGAAAATTTGCATGGAGA
TACGGGTACCCATATTTGGCCATTGTCCTAAATTTCAGCCAGACATGGGCATTATACTGT
CTAATACAATTTTATACTGCTACCAAGGAGAAGTTGGAACCTATTAAGCCCCTGTCTAAG
TTTCTAACCTTCAAATCCATTGTATTTTTGACATGGTGGCAAGGTATTGCTGTTGCATTT
CTTTTTTCAACTGGGCTTTTTAAAGGACATTTGGCGCAAAGATTTCAAACACGTATCCAG
GATTACATCATATGCCTTGAGATGGGGGTGGCTGCAGTGGTTCATTTGAAAGTATTTCCA
GCTAAACCTTACAGACGTGGGGAGAGAAGTGTTAGCAATGTTGCTGTGATGTCTGATTAT
GCATCTCTGGGAGCTTCAGATCCTGAAGAAGAACGAGAGATTGACAATGTAGCAATCATG
CAAGCTGCTCGTCCTGATTCCAGGGACCGGCGATTGAGTTTCCCTCAGAGTGTTCGCGAT
GTCGTTTTAGGAAGTGGTGAAATTATGGTTGATGATGTCAAATATACAGTTTCCCACGTC
GTGGAGCCTGTGGAGCGGAGTTTTTCCAAGATAAACCGGACACTTCATCAAATCTCCGAA
AACGTCAAGCAGCTTGAGAAGCAAAAGAGAAAGGCTAAGGATGATAGTGATGTTCCCCTT
GAACCATTTTCAGAGGAATTCGCAGAAGCTCATGACAATGTTTTCGGAGGTAGTGTTAGC
GACAGTGGATTAGCTAGGAAAAAGTACAAGAACACCAAAAGGGCACCGTCGTCTCTGAAA
CCGTTCGAGTTCAGATTAGGTAGATGGTTCCAGTAGTCAGCCAGTTGTGGTTTATTGGGT
TTTGTTTCTGACCAACAGGGAGCTAACCTCAAATCCAGCAGTTTATACAACATAGGACAT
ACTGGGGGCAAAGCGATGACATTTCCGAAAACTAACAGTTCACAGGAGGATGATGTGCAC
TGGAGCTTCAGTTTCCTTCATTAACTTTCCTCTTGTGTTTATACAGCTCGTCCTGGCCCT
TGTCAATTTCAGGAGGCAGTTACTAGAATTTTTTTTGTCATGAGAGCAGCCTTGTTTAGT
CTAGTTAACTACACTTACTACAGGCAAAGAAATATTAAGCCGCGGCAAAGCAACTACTAC
TGAATACTGATGTAACCCTCCTTAAGTTTCTTTGAATTAACATGCATAGAAGGGATACAT
TTGTAAACTGATGAACAACATGTTTCAAATCGGTAAAGTGATAATAGCACCAATGTGAAG

consensusID : consensus_11632#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 733
fasta sequence 
                              [AGGCGCCTTTTTTTCCTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGCCCGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGAAGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCATTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTGTTTTATCCTTGTTTCTAATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAAAGTTCTTGATTGGTCTCATTCTGATGGTTCCAGTATATGCTGTTCAATCATTCTTCTCATTACTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCCATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGATAGTACAATCAGATTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTA]

[+] EMBL CB671413             [AGGCGCCTTTTTTTCCTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGCCCGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGAAGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCATTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTGTTTTATCCTTGTTTCTAATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAAAGTTCTTGATTGGTCTCATTCTGATGGTTCCAGTATATGCTGTTCAATCATTCTTCTCATTACTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCCATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGATAGTACAATCAGATTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTA]




>consensus_11632#1
AGGCGCCTTTTTTTCCTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTC
CGCCTCGGCGATCCACAGGGCCCGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACT
AAAGAGAGCTTTTTCATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAAT
CCTGGGACTCTCTAGCCTGTAGAAGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGAT
CACAATATTTACCCACGGCACTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCT
TTTTCGTGTTAATACATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTG
GCTTTGTTTCATTGTCAGAGTCATTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTG
TGACCGCTTCACTTGTTTTATCCTTGTTTCTAATATTTGAGCATCTCTGCGCATACCATC
AACCTGAGGAGCAAAAGTTCTTGATTGGTCTCATTCTGATGGTTCCAGTATATGCTGTTC
AATCATTCTTCTCATTACTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACT
GTTATGAGGCATTCGCCATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGG
AGGATAGTACAATCAGATTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGC
TAGATGTTGATTA

consensusID : consensus_11632#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 509
fasta sequence 
                              [ACTGTTTTAGTTGTGTCCATCTTGAGCATGGGAAATCGAGCTAGTCCAAAATTATTTACTTATTTAAAGTAGCCAGTAACTCTGTTCTCTGTTATGTATTCTCTTTAAGATACATTGCTATCACTTTGTAATGTTTTGTTCCCTTCCTGTACCACATTTTGTTTTTGCCAACTTGAATGTGTTGTATATAAAAACTTCGGTTTATTTCTTTCATTCCTGATAGAATGACCTTTCTTGTTCTTTTTGCAGTTCTTCTCATTACTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCCATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGAAAGTACAATCAGATTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTATGATTATGGTATTGTGAAGCATCCTTTCCCATTAAACTGGTTTATGAGAAATTGGTACCTTGGTCCTGATTT]

[+] EMBL CF303084             [ACTGTTTTAGTTGTGTCCATCTTGAGCATGGGAAATCGAGCTAGTCCAAAATTATTTACTTATTTAAAGTAGCCAGTAACTCTGTTCTCTGTTATGTATTCTCTTTAAGATACATTGCTATCACTTTGTAATGTTTTGTTCCCTTCCTGTACCACATTTTGTTTTTGCCAACTTGAATGTGTTGTATATAAAAACTTCGGTTTATTTCTTTCATTCCTGATAGAATGACCTTTCTTGTTCTTTTTGCAGTTCTTCTCATTACTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCCATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGAAAGTACAATCAGATTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTATGATTATGGTATTGTGAAGCATCCTTTCCCATTAAACTGGTTTATGAGAAATTGGTACCTTGGTCCTGATTT]




>consensus_11632#2
ACTGTTTTAGTTGTGTCCATCTTGAGCATGGGAAATCGAGCTAGTCCAAAATTATTTACT
TATTTAAAGTAGCCAGTAACTCTGTTCTCTGTTATGTATTCTCTTTAAGATACATTGCTA
TCACTTTGTAATGTTTTGTTCCCTTCCTGTACCACATTTTGTTTTTGCCAACTTGAATGT
GTTGTATATAAAAACTTCGGTTTATTTCTTTCATTCCTGATAGAATGACCTTTCTTGTTC
TTTTTGCAGTTCTTCTCATTACTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGG
GACTGTTATGAGGCATTCGCCATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGT
GGGGAGGAAAGTACAATCAGATTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCT
CTGCTAGATGTTGATTATGATTATGGTATTGTGAAGCATCCTTTCCCATTAAACTGGTTT
ATGAGAAATTGGTACCTTGGTCCTGATTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11632#0      GACAAATTCGTCTCCCTCGTTGGAAGTGGAGGCGCGGAGGCGGAAGCTTTTCCTCCTCCT 60
consensus_11632#1      -------------------------------------AGGCGCCTTTTTTTCCTCCTCCT 23
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      CTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGAAG 120
consensus_11632#1      CTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGCCC 83
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      GAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAA 180
consensus_11632#1      GAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAA 143
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      GAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGA 240
consensus_11632#1      GAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGA 203
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      AGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTG 300
consensus_11632#1      AGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTG 263
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      TCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGC 360
consensus_11632#1      TCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGC 323
consensus_11632#2      ------------------------------ACTGTTTTAGTTGTGTCCAT-CTTGAGCAT 29
                                                       * * **  * ****  ** * ** *   

consensus_11632#0      AGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCA 420
consensus_11632#1      AGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCA 383
consensus_11632#2      GGGAAATCGAGCTAGTCCAAAATTATTTACTTATTTAAAGTAGC--CAGTAACTCTGTTC 87
                        *    * * *    **    *  ** *  *    *    * *   ** *  *   **  

consensus_11632#0      TTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTGTTTTATCC 480
consensus_11632#1      TTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTGTTTTATCC 443
consensus_11632#2      TCTGTTATGTATTCTCTTTAAGATACATTGCTATCACTTTGTAATGT-TTTGTTCCCTTC 146
                       *     *  *   *  **     * **    ****  *      *    *****   * *

consensus_11632#0      TTGTTTCTAATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAAAGTTC--T 538
consensus_11632#1      TTGTTTCTAATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAAAGTTC--T 501
consensus_11632#2      CTGTACC--ACATTT---TGTTTTTGCCAACTTGAATGTGTTGTATATAAAAACTTCGGT 201
                        ***  *  * ****     * * ***  *    *      **   *  **** ***  *

consensus_11632#0      TGATTGGTCTCATTC-TGATGG--TTCCAGTATATGCTGTTCAATCA-TTCTTCTCATTA 594
consensus_11632#1      TGATTGGTCTCATTC-TGATGG--TTCCAGTATATGCTGTTCAATCA-TTCTTCTCATTA 557
consensus_11632#2      TTATTTCTTTCATTCCTGATAGAATGACCTTTCTTGTTCTTTTTGCAGTTCTTCTCATTA 261
                       * ***  * ****** **** *  *  *  *   ** * **    ** ************

consensus_11632#0      CTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCC 654
consensus_11632#1      CTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCC 617
consensus_11632#2      CTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCC 321
                       ************************************************************

consensus_11632#0      ATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGAAAGTACAATCAGA 714
consensus_11632#1      ATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGATAGTACAATCAGA 677
consensus_11632#2      ATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGAAAGTACAATCAGA 381
                       *********************************************** ************

consensus_11632#0      TTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTATGAT 774
consensus_11632#1      TTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTA---- 733
consensus_11632#2      TTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTATGAT 441
                       ********************************************************    

consensus_11632#0      TATGGTATTGTGAAGCATCCTTTCCCATTAAACTGGTTTATGAGAAATTGGTACCTTGGT 834
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      TATGGTATTGTGAAGCATCCTTTCCCATTAAACTGGTTTATGAGAAATTGGTACCTTGGT 501
                                                                                   

consensus_11632#0      CCTGATTTTTACCATGCTGTGAAGGTTGGGATTGTGCAATATATGATACTGAAGCCTATT 894
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      CCTGATTT---------------------------------------------------- 509
                                                                                   

consensus_11632#0      TGTGCCATCTTGGCAATTTTTATGCAACTTATTGGGATCTATGGGGAAGGAAAATTTGCA 954
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      TGGAGATACGGGTACCCATATTTGGCCATTGTCCTAAATTTCAGCCAGACATGGGCATTA 1014
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      TACTGTCTAATACAATTTTATACTGCTACCAAGGAGAAGTTGGAACCTATTAAGCCCCTG 1074
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      TCTAAGTTTCTAACCTTCAAATCCATTGTATTTTTGACATGGTGGCAAGGTATTGCTGTT 1134
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      GCATTTCTTTTTTCAACTGGGCTTTTTAAAGGACATTTGGCGCAAAGATTTCAAACACGT 1194
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      ATCCAGGATTACATCATATGCCTTGAGATGGGGGTGGCTGCAGTGGTTCATTTGAAAGTA 1254
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      TTTCCAGCTAAACCTTACAGACGTGGGGAGAGAAGTGTTAGCAATGTTGCTGTGATGTCT 1314
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      GATTATGCATCTCTGGGAGCTTCAGATCCTGAAGAAGAACGAGAGATTGACAATGTAGCA 1374
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      ATCATGCAAGCTGCTCGTCCTGATTCCAGGGACCGGCGATTGAGTTTCCCTCAGAGTGTT 1434
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      CGCGATGTCGTTTTAGGAAGTGGTGAAATTATGGTTGATGATGTCAAATATACAGTTTCC 1494
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      CACGTCGTGGAGCCTGTGGAGCGGAGTTTTTCCAAGATAAACCGGACACTTCATCAAATC 1554
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      TCCGAAAACGTCAAGCAGCTTGAGAAGCAAAAGAGAAAGGCTAAGGATGATAGTGATGTT 1614
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      CCCCTTGAACCATTTTCAGAGGAATTCGCAGAAGCTCATGACAATGTTTTCGGAGGTAGT 1674
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      GTTAGCGACAGTGGATTAGCTAGGAAAAAGTACAAGAACACCAAAAGGGCACCGTCGTCT 1734
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      CTGAAACCGTTCGAGTTCAGATTAGGTAGATGGTTCCAGTAGTCAGCCAGTTGTGGTTTA 1794
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      TTGGGTTTTGTTTCTGACCAACAGGGAGCTAACCTCAAATCCAGCAGTTTATACAACATA 1854
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      GGACATACTGGGGGCAAAGCGATGACATTTCCGAAAACTAACAGTTCACAGGAGGATGAT 1914
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      GTGCACTGGAGCTTCAGTTTCCTTCATTAACTTTCCTCTTGTGTTTATACAGCTCGTCCT 1974
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      GGCCCTTGTCAATTTCAGGAGGCAGTTACTAGAATTTTTTTTGTCATGAGAGCAGCCTTG 2034
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      TTTAGTCTAGTTAACTACACTTACTACAGGCAAAGAAATATTAAGCCGCGGCAAAGCAAC 2094
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      TACTACTGAATACTGATGTAACCCTCCTTAAGTTTCTTTGAATTAACATGCATAGAAGGG 2154
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      ATACATTTGTAAACTGATGAACAACATGTTTCAAATCGGTAAAGTGATAATAGCACCAAT 2214
consensus_11632#1      ------------------------------------------------------------
consensus_11632#2      ------------------------------------------------------------
                                                                                   

consensus_11632#0      GTGAAG 2220
consensus_11632#1      ------
consensus_11632#2      ------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)