cluster # 11810

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Oryza sativa
cluster # 11810 cluster # 11810 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11810#0 length = 775 sequences # 3
consensus_11810#1 length = 727 sequences # 3

consensus_11810#2 length = 493 sequences # 2
consensus_11810#3 length = 268 sequences # 1

consensusID : consensus_11810#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 775
fasta sequence

                              [TAGTCTTCTACTGACCGACCAGTTGAGATAATTTGAGAAATATCCATTGCAATCTATTTTAATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACAATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCTGAGCATCACCCACACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATCACACCAAAAAGAGCTAGAAACGAAGTTGGGGGATAATTGGGAAGTGCCCCTGCNCNTGTTGC-TTAGTAATGTTAAAC-TTGGCCATTTTATGGATTCCCGGAAATTTNGATNTCCCATANCTCTAACCCCTNCCCAAATCCGCCCAAACCCNTGCCAATTCCTGCGCCCGGGGGNTCCTTATTCTAAACCGCCCCCCCGCGGNGAACCCCCCTTTNTTCCCTTANTGANGGTTAATTCAANCTGGNTTATCNGGGNCAACTGTTTCCGTTTNAATTTTTCCCCCCNTNCCCCACTTTAACCGAACNTAATNTTANCCGGGGGCCANNATGACCANCCCTATGTTGNCCCGCCCTCCTTCGGAACTTTGCCNNNTTAAACCNCCCCCGGGAGGGGTGTTTTGGCCCCCCCCCCCCNA]

[-] EMBL CB679972             [TAGTCTTCTACTGACCGACCAGTTGAGATAATTTGAGAAATATCCATTGCAATCTATTTTAATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACAATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCTTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCTGAGCATCACCCACACCATCTCCAACACGAACGCCTCCACCCTCCAAAGCACCATCAAATCACACCAAAAAGAGCTAGAAACGAA                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BE229257             [                                      AATATCCATTGCAATCTATTTTAATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACAATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAAAATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCCTGAGCGCCGTGGCGACGTATTCGGCGACGGCGAGGCAGGAGGAAAGCCAGCCGCTGAGCATCACCCACACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCCAATCACACCAAAAAGAACTAGAAACGAAGTTGGGGGATAATTGGGAAGTGCCCCTGCNCNTGTTGC TTAGTAATGTTAAAC TTGGCCATTTTATGGATTCCCGGAAATTTNGATNTCCCATANCTCTAACCCCTNCCCAAATCCGCCCAAACCCNTGCCAATTCCTGCGCCCGGGGGNTCCTTATTCTAAACCGCCCCCCCGCGGNGAACCCCCCTTTNTTCCCTTANTGANGGTTAATTCAANCTGGNTTATCNGGGNCAACTGTTTCCGTTTNAATTTTTCCCCCCNTNCCCCACTTTAACCGAACNTAATNTTANCCGGGGGCCANNATGACCANCCCTATGTTGNCCCGCCCTCCTTCGGAACTTTGCCNNNTTAAACCNCCCCCGGGAGGGGTGTTTTGGCCCCCCCCCCCCNA]
[-] EMBL CA752847             [                                                                         cgggcagGTGCAAAAAAAAATTAAAATAACATTCGGATATATACACAATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCGGGAGGAGAGCCAGCCGCTGAGCATCACCCACACCATCTCCAACACGAACACCTCCA CCTCCAAAGCACCATCAAATCACACCAAAAAGAGCTAGAAACGAAGTT GGGGATAATTGGGAAGTGCCCTTGCTCTTGTTGCTTTAGTAGTGTAGAACTTTGGCCATTTT                                                                                                                                                                                                                                                                                                                                       ]




>consensus_11810#0
TAGTCTTCTACTGACCGACCAGTTGAGATAATTTGAGAAATATCCATTGCAATCTATTTT
AATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACA
ATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCAT
GGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACT
CTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCT
GAGCATCACCCACACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATC
ACACCAAAAAGAGCTAGAAACGAAGTTGGGGGATAATTGGGAAGTGCCCCTGCNCNTGTT
GCTTAGTAATGTTAAACTTGGCCATTTTATGGATTCCCGGAAATTTNGATNTCCCATANC
TCTAACCCCTNCCCAAATCCGCCCAAACCCNTGCCAATTCCTGCGCCCGGGGGNTCCTTA
TTCTAAACCGCCCCCCCGCGGNGAACCCCCCTTTNTTCCCTTANTGANGGTTAATTCAAN
CTGGNTTATCNGGGNCAACTGTTTCCGTTTNAATTTTTCCCCCCNTNCCCCACTTTAACC
GAACNTAATNTTANCCGGGGGCCANNATGACCANCCCTATGTTGNCCCGCCCTCCTTCGG
AACTTTGCCNNNTTAAACCNCCCCCGGGAGGGGTGTTTTGGCCCCCCCCCCCCNA

consensusID : consensus_11810#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 727
fasta sequence

                              [TTTTTTTTTTGAGATAATTTGAGAAATATCCATTGCAATCTATTTTAATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACAATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCTGAGCATCA--CCCACACCATCTCCAACACG-AACACCTCCACCCTCCAAAGCACCATCAAATCACACCAAAAAGAGCTAGAAACGAACTAGGGAAGAACAGAAAATCGTTAGCTTATGATCATTTCCATCTGATACCAGCACAAGCTAGGAGAAGCTGATATACAGTGCTCCAAATTCTAAGCGAGAGTTTTTTTAAAAAAAATTTATTTTGCAGCAAAATGAAACAGAAAAACTAACAGACTAAGCAAAATAAAGCAGAGAATTCAACAGGGTAGAGAGCCTTACGTTGGGGATAATTGGGAAGTGCCCTTGCTCTTGTTGCTTTAGTAGTGTAGAACTTTGGCCATTTTTATGGAGTACCTGGAAATTTGGATCTCACATAGCTCTAAGCAGAAGGGGGGATAAGGAATTGCAGGGGTTTTTCTACTCCTTCAGTCCAGTCA]

[+] EMBL CF279773             [TTTTTTTTTTGAGATAATTTGAGAAATATCCATTGCAATCTATTTTAATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACAATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCCTGAGCGCCGTGGCGACGTAATCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCTGAGCATCA  CCCACACCATCTCCAACACG AACACCTCCACCCTCCAAAGCACCATCAAATCACACCAAAAAGAGCTAGAAACGAACTAGGGAAGAACAGAAAATCGTTAGCTTATGATCATTTC                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL AK120788             [                              CATTGCAATCTATTTTAATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACAATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCTGAGCATCA  CCCACACCATCTCCAACACG AACACCTCCACCCTCCAAAGCACCATCAAATCACACCAAAAAGAGCTAGAAACGAACTAGGGAAGAACAGAAAATCGTTAGCTTATGATCATTTCCATCTGATACCAGCACAAGCTAGGAGAAGCTGATATACAGTGCTCCAAATTCTAAGCGAGAGTTTTTTTAAAAAAAATTTATTTTGCAGCAAAATGAAACAGAAAAACTAACAGACTAAGCAAAATAAAGCAGAGAATTCAACAGGGTAGAGAGCCTTACGTTGGGGATAATTGGGAAGTGCCCTTGCTCTTGTTGCTTTAGTAGTGTAGAACTTTGGCCATTTTTATGGAGTACCTGGAAATTTGGATCTCACATAGCTCTAAGCAG                                                  ]
[-] EMBL CF279772             [                                                                                                                                                   AACCAACAAATGCAGGCATGGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCTGAGCATCAACCCCACACCATCTCCAACACGAAACACCTTCCCACTCCAAAGCACCATCAAATCACACCAAAAAGAGCTAGAAACGAACTAGGGAAGAACAGAAAATCGTTAGCTTATGATCATTTCCATCTGATACCAGCACAAGCTAGGAGAAGCTGATATACAGTGCTCCAAATTCTAAGCGAGAGTTTTTTTAAAAAAAATTTATTTTGCAGCAAAATGAAACAGAAAAACTAACAGACTAGGCAAAATAAAGCAGAGAATTCAACAGGGTAGAGAGCCTTACGTTGGGGATAATTGGGAAGTGCCCTTGCTCTTGTTGCTTTAGTAGTGTAGAACTTTGGCCATTTTTATGGAGTACCTGGAAATTTGGATCTCACATAGCTCTAAGCAGAAGGGGGGATAAGGAATTGCAGGGGTTTTTCTACTCCTTCAGTCCAGTCA]




>consensus_11810#1
TTTTTTTTTTGAGATAATTTGAGAAATATCCATTGCAATCTATTTTAATTTGCCTCAAAT
CATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACAATTGCAATGTGTAT
AAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAAGATGATTTAT
ATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCCTGAGCGCCG
TGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCTGAGCATCACCCACA
CCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATCACACCAAAAAGAGC
TAGAAACGAACTAGGGAAGAACAGAAAATCGTTAGCTTATGATCATTTCCATCTGATACC
AGCACAAGCTAGGAGAAGCTGATATACAGTGCTCCAAATTCTAAGCGAGAGTTTTTTTAA
AAAAAATTTATTTTGCAGCAAAATGAAACAGAAAAACTAACAGACTAAGCAAAATAAAGC
AGAGAATTCAACAGGGTAGAGAGCCTTACGTTGGGGATAATTGGGAAGTGCCCTTGCTCT
TGTTGCTTTAGTAGTGTAGAACTTTGGCCATTTTTATGGAGTACCTGGAAATTTGGATCT
CACATAGCTCTAAGCAGAAGGGGGGATAAGGAATTGCAGGGGTTTTTCTACTCCTTCAGT
CCAGTCA

consensusID : consensus_11810#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 493
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTAATTTGAGAAATATCCATTGCAATCTATTTTAATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACAATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCTAGCCG--GAGACGTC-CTCGCACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATCACACCAAAAAGAGGTTGGGGATAATTGGGAAGTGCCCTTGCTCTTGTTGCTTTAGTAGTGTAGAACTTTGGCCATTTTTATGGAGTACCTGGAAATTTGGATCTCACATAGCTCTAAGCAGAAGGGGGGATAAGGAATT]

[-] EMBL BE229367             [TTTTTTTTTTTTTTTTTTTTTTTTTAATTTGAGAAATATCCATTGCAATCTATTTTAATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACAATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCTAGCCG  GAGACGTC CTCG                                                                                                                                                                                           ]
[-] EMBL CF305344             [                                                            TGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACAATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCCGAGA ATCACCCACACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATCACACCAAAAAGAGGTTGGGGATAATTGGGAAGTGCCCTTGCTCTTGTTGCTTTAGTAGTGTAGAACTTTGGCCATTTTTATGGAGTACCTGGAAATTTGGATCTCACATAGCTCTAAGCAGAAGGGGGGATAAGGAATT]




>consensus_11810#2
TTTTTTTTTTTTTTTTTTTTTTTTTAATTTGAGAAATATCCATTGCAATCTATTTTAATT
TGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACAATTG
CAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCATGGAA
GATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACTCTGC
CTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCTAGCCGGAGACG
TCCTCGCACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATCACACCA
AAAAGAGGTTGGGGATAATTGGGAAGTGCCCTTGCTCTTGTTGCTTTAGTAGTGTAGAAC
TTTGGCCATTTTTATGGAGTACCTGGAAATTTGGATCTCACATAGCTCTAAGCAGAAGGG
GGGATAAGGAATT

consensusID : consensus_11810#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 268
fasta sequence

                              [GTCACCACNNNGNCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCTGAGCATCACCCACACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATCACACCAAAAAGAGCTAGAAACGAAGTTGGGGATAATTGGGAAGTGCCCTTGCTCTTGTTGCTTTAGTAGTGTAGAACTTTGGCCATTTTTATGGAGTACCTGGAAATTTGGATCTCACATAGCTCTAAGCAGAAGGGGG]

[-] EMBL CF196365             [GTCACCACNNNGNCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCTGAGCATCACCCACACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATCACACCAAAAAGAGCTAGAAACGAAGTTGGGGATAATTGGGAAGTGCCCTTGCTCTTGTTGCTTTAGTAGTGTAGAACTTTGGCCATTTTTATGGAGTACCTGGAAATTTGGATCTCACATAGCTCTAAGCAGAAGGGGG]




>consensus_11810#3
GTCACCACNNNGNCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAG
CCAGCCGCTGAGCATCACCCACACCATCTCCAACACGAACACCTCCACCCTCCAAAGCAC
CATCAAATCACACCAAAAAGAGCTAGAAACGAAGTTGGGGATAATTGGGAAGTGCCCTTG
CTCTTGTTGCTTTAGTAGTGTAGAACTTTGGCCATTTTTATGGAGTACCTGGAAATTTGG
ATCTCACATAGCTCTAAGCAGAAGGGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11810#0      TAGTCTTCTACTGACCGACCAGTTGAGATAATTTGAGAAATATCCATTGCAATCTATTTT 60
consensus_11810#3      ------------------------------------------------------------
consensus_11810#2      ----TTTTTTTTTTTTTTTTTTTTTTTTTAATTTGAGAAATATCCATTGCAATCTATTTT 56
consensus_11810#1      --------------TTTTTTTTTTGAGATAATTTGAGAAATATCCATTGCAATCTATTTT 46
                                                                                   

consensus_11810#0      AATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACA 120
consensus_11810#3      ------------------------------------------------------------
consensus_11810#2      AATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACA 116
consensus_11810#1      AATTTGCCTCAAATCATGTCGTACAAAAAAAAATTAAAATAACATTCGGATATATACACA 106
                                                                                   

consensus_11810#0      ATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCAT 180
consensus_11810#3      ------------------------------------------------------------
consensus_11810#2      ATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCAT 176
consensus_11810#1      ATTGCAATGTGTATAAATGCTCACAAACACACAAAGAAACCAAACAACAAATGCAGGCAT 166
                                                                                   

consensus_11810#0      GGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACT 240
consensus_11810#3      ---------------------------------------------------GTCACCACN 9
consensus_11810#2      GGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACT 236
consensus_11810#1      GGAAGATGATTTATATCCAGTTCGTCCAAAGAAATTCTAGCCGGAGACGTCGTCACCACT 226
                                                                          ******** 

consensus_11810#0      CTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCT 300
consensus_11810#3      NNGNCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCT 69
consensus_11810#2      CTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCTAGCCGGA 296
consensus_11810#1      CTGCCTGAGCGCCGTGGCGACGTAGTCGGCGACGGCGAGGCAGGAGGAGAGCCAGCCGCT 286
                         * ************************************************ *****  

consensus_11810#0      GAGCATCACCCACACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATC 360
consensus_11810#3      GAGCATCACCCACACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATC 129
consensus_11810#2      GA-CGTC-CTCGCACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATC 354
consensus_11810#1      GAGCATCACCCACACCATCTCCAACACGAACACCTCCACCCTCCAAAGCACCATCAAATC 346
                       ** * ** * * ************************************************

consensus_11810#0      ACACCAAAAAGAGCTAGAAACGAAGTTGGGGGATAATTGGGAAGTG----CCCCTGCNCN 416
consensus_11810#3      ACACCAAAAAGAGCTAGAAACGAAGTTGGGG-ATAATTGGGAAGTG----CCCTTGCTCT 184
consensus_11810#2      ACACCAAAAAGAG-----------GTTGGGG-ATAATTGGGAAGTG----CCCTTGCTCT 398
consensus_11810#1      ACACCAAAAAGAGCTAGAAACGA-ACTAGGGAAGAACAGAAAATCGTTAGCTTATGATCA 405
                       *************             * *** * **  *  **  *    *   **  * 

consensus_11810#0      TGTTGCTT-AGTAAT-GTTAAACTT-GGCCATTTT-ATGGATT-C-CCGGAAATTTNGAT 470
consensus_11810#3      TGTTGCTTTAGTAGT-GTAGAACTTTGGCCATTTTTATGGAGTAC-CTGGAAATTTGGAT 242
consensus_11810#2      TGTTGCTTTAGTAGT-GTAGAACTTTGGCCATTTTTATGGAGTAC-CTGGAAATTTGGAT 456
consensus_11810#1      TTTCCATCTGATACCAGCACAAGCTAGGAGAAGCTGATATACAGTGCTCCAAATTCTAAG 465
                       * *   *    **   *   **  * **  *   * **  *     *   *****   * 

consensus_11810#0      NTCCCATANCTCTAACCCCTNCCCAAATCCGCCCAAACCCNTGCC---AATTCCTGCGCC 527
consensus_11810#3      CTCACATAGCTCTAAGCAGAAGGGGG---------------------------------- 268
consensus_11810#2      CTCACATAGCTCTAAGCAGAAGGGGGGATAAGGAATT----------------------- 493
consensus_11810#1      CGAGAGTTTTTTTAAAAAAAATTTATTTTGCAGCAAAATGAAACAGAAAAACTAACAGAC 525
                             *   * ***                                             

consensus_11810#0      CGGGGGNTCCTTATTCTAAACCGCCCCCCCGCGGNGAACCCCCCTTTNTTCCCTTANTGA 587
consensus_11810#3      ------------------------------------------------------------
consensus_11810#2      ------------------------------------------------------------
consensus_11810#1      TAAGCAAAATAAAGCAGAGAATTCAACAGGGTAGAGAGCCTTACGTTGGGGATAATTGGG 585
                                                                                   

consensus_11810#0      NGGTTAATTCAANCTGGNTTATCNGGGNCAACTGTTTCCGTTTNAATTTTTCCCCCCNTN 647
consensus_11810#3      ------------------------------------------------------------
consensus_11810#2      ------------------------------------------------------------
consensus_11810#1      AAGTGCCCTTGCTCTTGTTGCTTTAGTAGTGTAGAACTTTGGCCATTTTTATGGAGTACC 645
                                                                                   

consensus_11810#0      CCCCACTTTA-ACCGAACNTAATNTTANCCGGGGGCCANNATGACCANCCCTATGTTGNC 706
consensus_11810#3      ------------------------------------------------------------
consensus_11810#2      ------------------------------------------------------------
consensus_11810#1      TGGAAATTTGGATCTCACATAGCTCTAAGCAGAAGGGGGGATAAGGAATTGCAGGGGTTT 705
                                                                                   

consensus_11810#0      CCGCCCTCCTTCGGAACTTTGCCNNNTTAAACCNCCCCCGGGAGGGGTGTTTTGGCCCCC 766
consensus_11810#3      ------------------------------------------------------------
consensus_11810#2      ------------------------------------------------------------
consensus_11810#1      TTCTACTCCTTCAGTCCAGTCA-------------------------------------- 727
                                                                                   

consensus_11810#0      CCCCCCCNA 775
consensus_11810#3      ---------
consensus_11810#2      ---------
consensus_11810#1      ---------