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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12182#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2638 fasta sequence
[AGCAGAAAACCCCAAATCCCGCGGTTCCCCCGCGCCGCAAAAATCATCCATGGCTTCTCCGCCGCCACCGGCGGCCGCCGCCGCCGCGAGCCCGAAGCGGAAACCCAAGCCCAAGCCGAAGGCAGCCGGCGCCTCCACCCTAAACCCTAACTGGGCGCAGCTCCAGTCCAAGCTCCCCCGCCCCGTCGCCGCCACCACCCTCGGCAAGCGCAAGCACCGCCCCGACCACCCTTCTCCGGCCCCCGCGCCCACCGAGCCCGCCGCGGAGGAGGAGGCGGCGGAGGTCAAGCTCGTGCCCACCTCCGACGACACCAGCTTGACGAAGGCGGTCGCTGTGGATTGCGAGATGGTCGGGGTCGGCGCAGGCGGCAGCAAGAGCGCCCTCGGCAGAGTCACCTTGGTTAACTCTTGGGGTAACGTTGTATATGATGAATATACAAGACCGGTAGAGCGGATTGTTGACTACCGTACCCATATTAGTGGGATTAGACCGAAGCACATGAATAAAGCCAAAGATTTCTGGGTTGTTCAGAAAGATGTAGCTGAGCTGATCAAAGGAAGAATTCTTGTTGGGCATGCCTTGCACCATGATCTTAAGGTTTTGCTACTAGGCCACCCAAAGAAGGACATAAGGGATACCTCAGAATATGAGGTTTTTCGAAGGGAAGGGAAGAGGAGATCACTGAAAGATCTTACTGCTCAAGTACTTGGTGCTAAAATACAACAGAAAGAGCATTGCCCAATTGAGGATGCTCGTGCAGCAATGTTCATTTACAACAAGCATAAGAAAGTATGGGAGAAGAATATGAAAGAACAATTCAGATTTAGAAAGAAGCTCAAGAAGCGAGGCAAGAAGAAATCTGCTGAAGGCAGTGGGAATGATCCTAATGTTCCCACGGTTCTTCTATAGAGGATGGATTTAGGAAGCTAGTGTGATGCATTGCCCTACCTGACATGAATTTGAAGATGCCA-AAGGCTATTTGTGTGAGATTCTCATGGAACTTAAATGAGGCAGTATGCTGACCCAAGATGTGGTGCAGCTCAATCATGATGAACATCAACACATTTCTCGATGACAGTGTCACGATTCCATGGATTTATCACATTTCATGTAGTAGCATTTGTTTTAGGGAAGC-AATATTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAGTGCACGGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCCGGGACATCAGAATCCAGCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTGCATCTCCAGAGGAAACAGGTCTGAAAATTTCTGATTTTGATGCCATGTTATGTTACCTCAGCAGGGTTGGAATACCGGTAGTATCTCCAGAATTAGTGGCTCCAAAAATTCAACTTTAAAGATTCAAATGCAAAAGGTATTTACAGAGGCTGGTTTCAGAGGTGAGCAGCAGCTGAAGCCTGAAGGGAAGCTAACCTTGCAGAGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCAGACGAGAAGGGAGATGTACTTCACGGTGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGCTGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCGACGCCGAGATGTTGCTGGAGATGACGCTCAGTGCCAGCCCCGTCTCGTCCGGGCTCGCCTGCAACGACAGCAACACGGTAAATCACCAACCTCCCATCACCACGGCCACACTTGGATTCAGCTGTTCAGTTGTCACAGAAAATTCAGTTGCTCCATGTCGCCGGCGGCCGGCGGTGGGTGGTTTACCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGAGTGGTGGAGCTGGGTTGCTTATGGATTAATGGATAGGATCAGTACGTGGTACCAACGGTACATTCTGGCTTGGCTTGTCGCTTGGGATCAAAGACTTGGGAGGAGGGTCAGGCAAGCAAAATTCATGGAGCTTGCTTCCAAGAAATCCAGGCAATTGTTGCTTCCCGGGTTACTGTATCTCCTAACCTTCCAAGATCCGAAACCCAACTTGCATAAAGCTACATGTCAAAATCAATAATTTATGATTTAAATATAATATAAATAAATTTCTATGG]
[+] EMBL AK120163 [AGCAGAAAACCCCAAATCCCGCGGTTCCCCCGCGCCGCAAAAATCATCCATGGCTTCTCCGCCGCCACCGGCGGCCGCCGCCGCCGCGAGCCCGAAGCGGAAACCCAAGCCCAAGCCGAAGGCAGCCGGCGCCTCCACCCTAAACCCTAACTGGGCGCAGCTCCAGTCCAAGCTCCCCCGCCCCGTCGCCGCCACCACCCTCGGCAAGCGCAAGCACCGCCCCGACCACCCTTCTCCGGCCCCCGCGCCCACCGAGCCCGCCGCGGAGGAGGAGGCGGCGGAGGTCAAGCTCGTGCCCACCTCCGACGACACCAGCTTGACGAAGGCGGTCGCTGTGGATTGCGAGATGGTCGGGGTCGGCGCAGGCGGCAGCAAGAGCGCCCTCGGCAGAGTCACCTTGGTTAACTCTTGGGGTAACGTTGTATATGATGAATATACAAGACCGGTAGAGCGGATTGTTGACTACCGTACCCATATTAGTGGGATTAGACCGAAGCACATGAATAAAGCCAAAGATTTCTGGGTTGTTCAGAAAGATGTAGCTGAGCTGATCAAAGGAAGAATTCTTGTTGGGCATGCCTTGCACCATGATCTTAAGGTTTTGCTACTAGGCCACCCAAAGAAGGACATAAGGGATACCTCAGAATATGAGGTTTTTCGAAGGGAAGGGAAGAGGAGATCACTGAAAGATCTTACTGCTCAAGTACTTGGTGCTAAAATACAACAGAAAGAGCATTGCCCAATTGAGGATGCTCGTGCAGCAATGTTCATTTACAACAAGCATAAGAAAGTATGGGAGAAGAATATGAAAGAACAATTCAGATTTAGAAAGAAGCTCAAGAAGCGAGGCAAGAAGAAATCTGCTGAAGGCAGTGGGAATGATCCTAATGTTCCCACGGTTCTTCTATAGAGGATGGATTTAGGAAGCTAGTGTGATGCATTGCCCTACCTGACATGAATTTGAAGATGCCA AAGGCTATTTGTGTGAGATTCTCATGGAACTTAAATGAGGCAGTATGCTGACCCAAGATGTGGTGCAGCTCAATCATGATGAACATCAACACATTTCTCGATGACAGTGTCACGATTCCATGGATTTATCACATTTCATGTAGTAGCATTTGTTTTAGGGAAGC AATATTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAGTGCACGGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCCGGGACATCAGAATCCAGCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTGCATCTCCAGAGGAAACAGGTCTGAAAATTTCTGATTTTGATGCCATGTTATGTTACCTCAGCAGGGTTGGAATACCGGTAGTATCTCCAGAATTAGTGGCTCCAAAAATTCAACTTTAAAGATTCAAATGCAAAAGGTATTTACAGAGGCTGGTTTCAGAGGTGAGCAGCAGCTGAAGCCTGAAGGGAAGCTAACCTTGCAGAGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCAGACGAGAAGGGAGATGTACTTCACGGTGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGCTGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCGACGCCGAGATGTTGCTGGAGATGACGCTCAGTGCCAGCCCCGTCTCGTCCGGGCTCGCCTGCAACGACAGCAACACGGTAAATCACCAACCTCCCATCACCACGGCCACACTTGGATTCAGCTGTTCAGTTGTCACAGAAAATTCAGTTGCTCCATGTCGCCGGCGGCCGGCGGTGGGTGGTTTACCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGAGTGGTGGAGCTGGGTTGCTTATGGATTAATGGATAGGATCAGTACGTGGTACCAACGGTACATTCTGGCTTGGCTTGTCGCTTGGGATCAAAGACTTGGGAGGAGGGTCAGGCAAGCAAAATTCATGGAGCTTGCTTCCAAGAAATCCAGGCAATTGTTGCTTCCCGGGTTACTGTATCTCCTAACCTTCCAAGATCCGAAACCCAACTTGCATAAAGCTACATGTCAAAATCAATAATTTATGATTTAAATATAATATAAATAAATTTCTATGG]
[+] EMBL AK105467 [ AGAAAACCCCAAATCCCGCGGTTCCCCCGCGCCGCAAAAATCATCCATGGCTTCTCCGCCGCCACCGGCG GCCGCCGCCGCGAGCCCGAAGCGGAAACCCAAGCCCAAGCCGAAGGCAGCCGGCGCCTCCACCCTAAACCCTAACTGGGCGCAGCTCCAGTCCAAGCTCCCCCGCCCCGTCGCCGCCACCACCCTCGGCAAGCGCAAGCACCGCCCCGACCACCCTTCTCCGGCCCCCGCGCCCACCGAGCCCGCCGCGGAGGAGGAGGCGGCGGAGGTCAAGCTCGTGCCCACCTCCGACGACACCAGCTTGACGAAGGCGGTCGCTGTGGATTGCGAGATGGTCGGGGTCGGCGCAGGCGGCAGCAAGAGCGCCCTCGGCAGAGTCACCTTGGTTAACTCTTGGGGTAACGTTGTATATGATGAATATACAAGACCGGTAGAGCGGATTGTTGACTACCGTACCCATATTAGTGGGATTAGACCGAAGCACATGAATAAAGCCAAAGATTTCTGGGTTGTTCAGAAAGATGTAGCTGAGCTGATCAAAGGAAGAATTCTTGTTGGGCATGCCTTGCACCATGATCTTAAGGTTTTGCTACTAGGCCACCCAAAGAAGGACATAAGGGATACCTCAGAATATGAGGTTTTTCGAAGGGAAGGGAAGAGGAGATCACTGAAAGATCTTACTGCTCAAGTACTTGGTGCTAAAATACAACAGAAAGAGCATTGCCCAATTGAGGATGCTCGTGCAGCAATGTTCATTTACAACAAGCATAAGAAAGTATGGGAGAAGAATATGAAAGAACAATTCAGATTTAGAAAGAAGCTCAAGAAGCGAGGCAAGAAGAAATCTGCTGAAGGCAGTGGGAATGATCCTAATGTTCCCACGGTTCTTCTATAGAGGATGGATTTAGGAAGCTAGTGTGATGCATTGCCCTACCTGACATGAATTTGAAGATGCCA AAGGCTATTTGTGTGAGATTCTCATGGAACTTAAATGAGGCAGTATGCTGACCCAAGATGTGGTGCAGCTCAATCATGATGAACATCAACACATTTCTCGATGACAGTGTCACGATTCCATGGATTTATCACATTTCATGTAGTAGCATTTGTTTTAGGGAAGC AATATTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTAT ]
[+] EMBL BM037696 [ TTGAGGATGCTCG CCACCAATGTTCATTTACAACAAGCATAAGAAAGTATGGGAGAAGAATATGAAAGAAC ATTCAGATTTAGAAAGAAGCTCAAGAAGCGAGGCAAGAAGAAATCTGCTGAAGGCAGTGGGAATGATCCTAATGTTCCCACGGTTCTTCTATAGAGGATGGATTTAGGAAGCTAGTGTGATGCATTGCCCTACCTGACATGAATTTGAAGATGCCACAAGGCTATTTGTGTGAGATTCTCATGGAACTTAAATAAGGCAGTATGCTGACCCAAGATGTGGTGCAGCTCAATCATGATGAACATCAACACATTTCTCGATGACAGTGTCACGATTCCCTGGATTTATCACATTTCATGTAGTAGCATTTGTTTTAGGGAAGCAAATATTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAaaaaa ]
consensusID : consensus_12182#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1045 fasta sequence
[TTTTTTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAG-TGCAC-GGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCC-GGGACATCAGAATCCAGCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTTGCAGAGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCA-GACGAGAAGGGAGATGTACTTCACGGTGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGCTGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCGACGCCG-AGATGTTGCTGG-AGATGACGCT-CAGTGCC-AGCCCCGTCTCGTCCGGGC-TCGCCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTCTCTCTGGCTCTGCATTATTCTCTCTCTAAGCTCACATAGCCATGATGCTATTATCTTATTTGTGTTCTTGAGAATGTGATCTGATC]
[-] EMBL AU086024 [TTTTTTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAGTTGCAC GGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGNAGCTTGCCGGGGACATCAGAATCCAGCGTGGTNATTAGGAACCTGGCTTGGACATAGTACCTTGCAGAGTtg ]
[-] EMBL AU088681 [ TTTTTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAANACCATCAACACCGAGCAGGNGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAA TAGAG TGCACGGGANCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCC GGGACATCAGAATCCAGCGTGGTTATTAGGAANCTGGCTTGGACATAGTACCTTGCAGAGTGGNTGAAGCAAGTGAAGGAGACGAGGAAGCAGGACGAGAANGGAGATGTACTTCACNGTGGCCGTCGCCTGGGTGCG ]
[-] EMBL AK061225 [ TTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAG TGCAC GGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCC GGGACATCAGAATCCAGCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTTGCAGAGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCA GACGAGAAGGGAGATGTACTTCACGGTGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGCTGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCGACGCCG AGATGTTGCTGG AGATGACGCT CAGTGCC AGCCCCGTCTCGTCCGGGC TCGCCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTCTCTCTGGCTCTGCATTATTCTCTCTCTAAGCTCACATAGCCATGATGCTATTATCTTATTTGTGTTCTTGAGAATGTGATCTGATC]
[-] EMBL AK099366 [ TTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAG TGCAC GGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCC GGGACATCAGAATCCAGCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTTGCAGAGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCA GACGAGAAGGGAGATGTACTTCACGGTGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGCTGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCGACGCCG AGATGTTGCTGG AGATGACGCT CAGTGCC AGCCCCGTCTCGTCCGGGC TCGCCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTCTCTCTGGCTCTGCATTATTCTCTCTCTAAGCTCACATAGCCATGATGCTATTATCTTATTTGTGTTCTTGAGAATGTGATCTGAT ]
[-] EMBL OSS12596A [ TCGTCGACNCCGAAGATGTTGCTGGAAGATGACGCT CAGTGCC AGCCCCGTCTCGTCCGGGCTTCGCCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTCTNTCTGGCTCTGCATTATTCTCTCTCTAAGCTCACATAGCCATGATGCTATTATCTTAT ]
[-] EMBL OSS12271A [ ttcCGTCGACGCCN AGATGTTGCTGGAAGATGACGCTAAAGTGCCAAGCCCCGTCTCGTCCGGGC TCGCCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTCTCTCTGGCTCTGCATTATTCTCTCTCTAAGCTCACATAGCCATGATGC ]
[-] EMBL OSS11388A [ TGTTGTGGTTCTCGTAGCCGATGACGGTGTCGACGGGGCGTCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGNCGAANATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12182#0 AGCAGAAAACCCCAAATCCCGCGGTTCCCCCGCGCCGCAAAAATCATCCATGGCTTCTCC 60
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 GCCGCCACCGGCGGCCGCCGCCGCCGCGAGCCCGAAGCGGAAACCCAAGCCCAAGCCGAA 120
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 GGCAGCCGGCGCCTCCACCCTAAACCCTAACTGGGCGCAGCTCCAGTCCAAGCTCCCCCG 180
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 CCCCGTCGCCGCCACCACCCTCGGCAAGCGCAAGCACCGCCCCGACCACCCTTCTCCGGC 240
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 CCCCGCGCCCACCGAGCCCGCCGCGGAGGAGGAGGCGGCGGAGGTCAAGCTCGTGCCCAC 300
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 CTCCGACGACACCAGCTTGACGAAGGCGGTCGCTGTGGATTGCGAGATGGTCGGGGTCGG 360
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 CGCAGGCGGCAGCAAGAGCGCCCTCGGCAGAGTCACCTTGGTTAACTCTTGGGGTAACGT 420
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 TGTATATGATGAATATACAAGACCGGTAGAGCGGATTGTTGACTACCGTACCCATATTAG 480
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 TGGGATTAGACCGAAGCACATGAATAAAGCCAAAGATTTCTGGGTTGTTCAGAAAGATGT 540
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 AGCTGAGCTGATCAAAGGAAGAATTCTTGTTGGGCATGCCTTGCACCATGATCTTAAGGT 600
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 TTTGCTACTAGGCCACCCAAAGAAGGACATAAGGGATACCTCAGAATATGAGGTTTTTCG 660
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 AAGGGAAGGGAAGAGGAGATCACTGAAAGATCTTACTGCTCAAGTACTTGGTGCTAAAAT 720
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 ACAACAGAAAGAGCATTGCCCAATTGAGGATGCTCGTGCAGCAATGTTCATTTACAACAA 780
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 GCATAAGAAAGTATGGGAGAAGAATATGAAAGAACAATTCAGATTTAGAAAGAAGCTCAA 840
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 GAAGCGAGGCAAGAAGAAATCTGCTGAAGGCAGTGGGAATGATCCTAATGTTCCCACGGT 900
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 TCTTCTATAGAGGATGGATTTAGGAAGCTAGTGTGATGCATTGCCCTACCTGACATGAAT 960
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 TTGAAGATGCCAAAGGCTATTTGTGTGAGATTCTCATGGAACTTAAATGAGGCAGTATGC 1020
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 TGACCCAAGATGTGGTGCAGCTCAATCATGATGAACATCAACACATTTCTCGATGACAGT 1080
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 GTCACGATTCCATGGATTTATCACATTTCATGTAGTAGCATTTGTTTTAGGGAAGCAATA 1140
consensus_12182#1 --------------------------------------------------------TTTT 4
*
consensus_12182#0 TTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAA 1200
consensus_12182#1 TTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAA 64
************************************************************
consensus_12182#0 CCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGA 1260
consensus_12182#1 CCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGA 124
************************************************************
consensus_12182#0 CCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCA 1320
consensus_12182#1 CCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCA 184
************************************************************
consensus_12182#0 GAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAAT 1380
consensus_12182#1 GAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAAT 244
************************************************************
consensus_12182#0 TGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTG 1440
consensus_12182#1 TGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTG 304
************************************************************
consensus_12182#0 GCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAGTGCACGGAGCCCCATTGACC 1500
consensus_12182#1 GCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAGTGCACGGAGCCCCATTGACC 364
************************************************************
consensus_12182#0 AGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCCGGGACATCAGAATCCA 1560
consensus_12182#1 AGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCCGGGACATCAGAATCCA 424
************************************************************
consensus_12182#0 GCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTGCATCTCCAGAGGAAACAGGTCT 1620
consensus_12182#1 GCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCT----------------------- 461
*************************************
consensus_12182#0 GAAAATTTCTGATTTTGATGCCATGTTATGTTACCTCAGCAGGGTTGGAATACCGGTAGT 1680
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 ATCTCCAGAATTAGTGGCTCCAAAAATTCAACTTTAAAGATTCAAATGCAAAAGGTATTT 1740
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 ACAGAGGCTGGTTTCAGAGGTGAGCAGCAGCTGAAGCCTGAAGGGAAGCTAACCTTGCAG 1800
consensus_12182#1 -------------------------------------------------------TGCAG 466
*****
consensus_12182#0 AGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCAGACGAGAAGGGAGATGTACTTCACGG 1860
consensus_12182#1 AGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCAGACGAGAAGGGAGATGTACTTCACGG 526
************************************************************
consensus_12182#0 TGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGC 1920
consensus_12182#1 TGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGC 586
************************************************************
consensus_12182#0 TGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCG 1980
consensus_12182#1 TGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCG 646
************************************************************
consensus_12182#0 ACGCCGAGATGTTGCTGGAGATGACGCTCAGTGCCAGCCCCGTCTCGTCCGGGCTCGCCT 2040
consensus_12182#1 ACGCCGAGATGTTGCTGGAGATGACGCTCAGTGCCAGCCCCGTCTCGTCCGGGCTCGCCT 706
************************************************************
consensus_12182#0 GCAACGACAGCAACACGGTAAATCACCAACCTCCCATCACCACGGCCACACTTGGATTCA 2100
consensus_12182#1 GCA--------------------------------------------------------- 709
***
consensus_12182#0 GCTGTTCAGTTGTCACAGAAAATTCAGTTGCTCCATGTCGCCGGCGGCCGGCGGTGGGTG 2160
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 GTTTACCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGAC 2220
consensus_12182#1 -----------CCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGAC 758
*************************************************
consensus_12182#0 GGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGAT 2280
consensus_12182#1 GGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGAT 818
************************************************************
consensus_12182#0 CACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCAC 2340
consensus_12182#1 CACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCAC 878
************************************************************
consensus_12182#0 CATCTTCTCTTGCCCTCCTCCGAGTGGTGGAGCTGGGTTGCTTATGGATTAATGGATAGG 2400
consensus_12182#1 CATCTTCTCTTGCCCTCCTCCG---GTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATT 935
********************** * * ** *** *** * * ** * **
consensus_12182#0 ATCAGT-ACGTGGTACCAACGGTACATTCTGGCTTGGCTTGTCGCTTGGGATCAAAGACT 2459
consensus_12182#1 ATCAATCACCTACCTCTCTCTGT-CTCTCTGGCTCTGC--ATTATTCTCTCTCTAAG--C 990
**** * ** * * * ** * ******* ** * * ** ***
consensus_12182#0 TGGGAGGAGGGTCAGGCAAGCAAAATTCATGGAGCTTGCTTCCAAGAAATCCAGGCAATT 2519
consensus_12182#1 TCACATAGCCATGATGCTATTATCTTATTTG-----TGTTCTTGAGAATGTGATCTGATC 1045
* * * * ** * * * ** ** * **** * **
consensus_12182#0 GTTGCTTCCCGGGTTACTGTATCTCCTAACCTTCCAAGATCCGAAACCCAACTTGCATAA 2579
consensus_12182#1 ------------------------------------------------------------
consensus_12182#0 AGCTACATGTCAAAATCAATAATTTATGATTTAAATATAATATAAATAAATTTCTATGG 2638
consensus_12182#1 -----------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||