cluster # 12350

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Oryza sativa
cluster # 12350 cluster # 12350 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12350#0 length = 1473 sequences # 8

consensus_12350#1 length = 647 sequences # 1
consensus_12350#2 length = 548 sequences # 1

consensusID : consensus_12350#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1473
fasta sequence

                              [CGCCCCCCAACCGCATCTCAATCTCTCTCCTCTCTCTCTCTCTCCAGCTCGCCTCCCCCTCGCCGGCGACGAGCTCTCCCCCGGCTAGGGTTAGACCAGGTGCCCCTCTTGTCTGCGGCGGAGGAGGTGGGAGGAAGGATGGAGGAGTCCGTGGGCTCGCGCGGCGGCGGCGGCGGCGGCCTGGACGCCCAGATCGAGCAGCTCATGGAGTGCCGCCCGCTCTCCGAGCCCGAGGTCAAGACGTTGTGCGAGAAGGCGAAGGAGATATTGATGGAAGAAAGCAACGTTCAGCCAGTTAAGAGCCCAGTCACAATTTGTGGTGATATCCATGGGCAATTCCATGATCTAGTAGAGCTCTTTCGGATTGGTGGGAAGTGTCCAGATACAAATTATTTGTTTATGGGAGATTATGTAGATCGTGGCTACTATTCTGTTGAGACTGTTACACTTTTGGTTGCACTGAAGGTGCGCTACCCACAGCGGATTACAATCCTTCGTGGAAACCATGAGAGTCGGCAGATCACACAGGTGTATGGATTCTACGACGAATGCCTACGAAAGTATGGAAGTGCAAATGTCTGGAAGATCTTCACCGATCTTTTTGACTATTTTCCATTGACAGCATTGGTTGAATCAGAGATTTTCTGCCTCCATGGTGGTTTATCGCCATCAATCGACAATCTTGATAGTGTTCGCAGCTTAGATCGTGTTCAAGAGGTCCCTCATGAGGGACCAATGTGTGATCTTCTATGGTCTGACCCGGATGATCGATGCGGTTGGGGCATATCTCCTCGTGGTGCTGGCTACACTTTTGGCCAGGACATATCGGAGCAGTTTAACCATACCAATAATCTCAAACTTGTAGCCCGGGCTCATCAATTAGTTATGGAAGGATATAACTGGGCGCACGAACAAAAGGTCGTGACCATATTCAGTGCACCTAATTATTGTTATCGCTGTGGCAACATGGCATCCATCCTGGAGGTTGATGACTGCAGGAATCACACATTTATTCAGTTTGAACCAGCTCCTAGGAGAGGTGAACCAGATGTGACACGGAGAACACCTGATTATTTCCTTTAAATTATCTGTTGTAATTTGTATTGTTTTGTTTCTTTTGTTTCTCTAAGACCGCAATAGTGA-GTGCTGGTCAGTAAAATTTTGTTGGATCCCTTTGGTAACTAAACTGGCCAGCGATAGCATGAGAATGCCGATGCCCAAAAAAAATGTGAAACTTATGCCCCTCATTGATCATTGTGAGAATGGTGCTGTCATCCAGGATGCAACGCATTGCATACGATTCAGTCTCTTACCCACCCTTCCCAAGCCATGTTTAGGTGGCATTGTGTTGACAGATATCAAAATTCCATTTTGGTATAAGCTGCTTGAGTTATGTATTGGCTGGTTTTGTAACTGATGTGCTTGGCCCTTCTATCATTAAGGACAGACAAGCTGATCTCTCGGTTGCAAATA]

[+] EMBL CF309711             [CGCCCCCCAACCGCATCTCAATCTCTCTCCTCTCTCTCTCTCTCCAGCTCGCCTCCCCCTCGCCGGCGACGAGCTCTCCCCCGGCTAGGGTTAGACCAGGTGCCCCTCTTGTCTGCGGCGGAGGAGGTGGGAGGAAGGATGGAGGAGTCCGTGGGCTCGCGCGGCGGCGGCGGCGGCGGCCTGGACGCCCAGATCGAGCAGCTCATGGAGTACCGCCCGCTCTCCGAGCCCGAGGTCAAGACGTTGTGCGAGAAGGCGAAGGAGATATTGATGGAAGAAAGCAACGTTCAGCCAGTTAAGAGCCCAGTCACAATTTGTGGTGATATCCATGGGCAATTCCATGATCTAGTAGAGCTCTTTCGGATTGGTGGGAAGTGTCCAGATACAAATTATTTGTTTATGGGAGATTATGTAGATCGTGGCTACTATTCTGTTGAGACTGTTACACTTTTGGTTGCACTGAAGGTGCGCTACCCACAGCGGATTACAATCCTTCGTGGAAACCATGAGAGTCGGCAGATCACACAGGTGTATGGATTCTACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB656830             [                    ATCTCTCTCCTCTCTCTCTCTCTCCAGCTCGCCTCCCCCTCGCCGGCGACGAGCTCTCCCCCGGCTAGGGTTAGACCAGGTGCCCCTCTTGTCTGCGGCGGAGGAGGTGGGAGGAAGGATGGAGGAGTCCGTGGGCTCGCGCGGCGGCGGCGGCGGCGGCCTGGACGCCCAGATCGAGCAGCTCATGGAGTGCCGCCCGCTCTCCGAGCCCGAGGTCAAGACGTTGTGCGAGAAGGCGAAGGAGATATTGATGGAAGAAAGCAACGTTCAGCCAGTTAAGAGCCCAGTCACAATTTGTGGTGATATCCATGGGCAATTCCATGATCTAGTAGAGCTCTTTCGGATTGGTGGGAAGTGTCCAGATACAAATTATTTGTTTATGGGAGATTATGTAGATCGTGGCTACTATTCTGTTGAGACTGTTACACTTTTGGTTGCACTGAAGGTGCGCTACCCACAGCGGATTACAATCCTTCGTGGAAACCATGAGAGTCGGCAGATCACACAGGTGTATGGATTCTACGACGAATGCCTACGAAAGTATGGAAGTGCAAATGTCTGGAAGATCTTCACCGATCTTTTTGACTATTTTCCATTGACAGCATTGGTTGAATCAGAGATTTTCTGCCTCCATGGTGGTTTATCGCCATCAATCGACAATCTTGATAGTGTTCGCAGCTTAGATCGTGTTCAAGAGGTCCCTCATGAGGGACCAATGTGTGATCTTCTATGGTCTGACCCGGATGATCGATGCGGTTGGGGCATATCTCCTCGTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB656889             [                    ATCTCTCTCCTCTCTCTCTCTCTCCAGCTCGCCTCCCCCTCGCCGGCGACGAGCTCTCCCCCGGCTAGGGTTAGACCAGGTGCCCCTCTTGTCTGCGGCGGAGGAGGTGGGAGGAAGGATGGAGGAGTCCGTGGGCTCGCGCGGCGGCGGCGGCGGCGGCCTGGACGCCCAGATCGAGCAGCTCATGGAGTGCCGCCCGCTCTCCGAGCCCGAGGTCAAGACGTTGTGCGAGAAGGCGAAGGAGATATTGATGGAAGAAAGCAACGTTCAGCCAGTTAAGAGCCCAGTCACAATTTGTGGTGATATCCATGGGCAATTCCATGATCTAGTAGAGCTCTTTCGGATTGGTGGGAAGTGTCCAGATACAAATTATTTGTTTATGGGAGATTATGTAGATCGTGGCTACTATTCTGTTGAGACTGTTACACTTTTGGTTGCACTGAAGGTGCGCTACCCACAGCGGATTACAATCCTTCGTGGAAACCATGAGAGTCGGCAGATCACACAGGTGTATGGATTCTACGACGAATGCCTACGAAAGTATGGAAGTGCAAATGTCTGGAAGATCTTCACCGATCTTTTTGACTATTTTCCATTGACAGCATTGGTTGAATCAGAGATTTTCTGCCTCCATGGTGGTTTATCGCCATCAATCGACAATCTTGATAGTGTTCGCAGCTTAGATCGTGTTCAAGAGGTCCCTCATGAGGGACCAATGTGTGATCTTCTATGGTCTGACCCGGATGATCGATGCGGTTGGGGCATATCTCCTCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK099604             [                           TCCTCTCTCTCTCTCTCCAGCTCGCCTCCCCCTCGCCGGCGACGAGCTCTCCCCCGGCTAGGGTTAGACCAGGTGCCCCTCTTGTCTGCGGCGGAGGAGGTGGGAGGAAGGATGGAGGAGTCCGTGGGCTCGCGCGGCGGCGGCGGCGGCGGCCTGGACGCCCAGATCGAGCAGCTCATGGAGTGCCGCCCGCTCTCCGAGCCCGAGGTCAAGACGTTGTGCGAGAAGGCGAAGGAGATATTGATGGAAGAAAGCAACGTTCAGCCAGTTAAGAGCCCAGTCACAATTTGTGGTGATATCCATGGGCAATTCCATGATCTAGTAGAGCTCTTTCGGATTGGTGGGAAGTGTCCAGATACAAATTATTTGTTTATGGGAGATTATGTAGATCGTGGCTACTATTCTGTTGAGACTGTTACACTTTTGGTTGCACTGAAGGTGCGCTACCCACAGCGGATTACAATCCTTCGTGGAAACCATGAGAGTCGGCAGATCACACAGGTGTATGGATTCTACGACGAATGCCTACGAAAGTATGGAAGTGCAAATGTCTGGAAGATCTTCACCGATCTTTTTGACTATTTTCCATTGACAGCATTGGTTGAATCAGAGATTTTCTGCCTCCATGGTGGTTTATCGCCATCAATCGACAATCTTGATAGTGTTCGCAGCTTAGATCGTGTTCAAGAGGTCCCTCATGAGGGACCAATGTGTGATCTTCTATGGTCTGACCCGGATGATCGATGCGGTTGGGGCATATCTCCTCGTGGTGCTGGCTACACTTTTGGCCAGGACATATCGGAGCAGTTTAACCATACCAATAATCTCAAACTTGTAGCCCGGGCTCATCAATTAGTTATGGAAGGATATAACTGGGCGCACGAACAAAAGGTCGTGACCATATTCAGTGCACCTAATTATTGTTATCGCTGTGGCAACATGGCATCCATCCTGGAGGTTGATGACTGCAGGAATCACACATTTATTCAGTTTGAACCAGCTCCTAGGAGAGGTGAACCAGATGTGACACGGAGAACACCTGATTATTTCCTTTAAATTATCTGTTGTAATTTGTATTGTTTTGTTTCTTTTGTTTCTCTAAGACCGCAATAGTGA GTGCTGGTCAGTAAAATTTTGTTGGATCCCTTTGGTAACTAAACTGGCCAGCGATAGCATGAGAATGCCGATGCCCAAAAAAAATGTGAAACT                                                                                                                                                                                                                                             ]
[-] EMBL CB656831             [                                                                                                                                                                                                                                                                                                                                                     TGATCTAGTAGAGCTCTTTCGGATTGGTGGGAAGTGTCCAGATACAAATTATTTGTTTATGGGAGATTATGTAGATCGTGGCTACTATTCTGTTGAGACTGTTACACTTTTGGTTGCACTGAAGGTGCGCTACCCACAGCGGATTACAATCCTTCGTGGAAACCATGAGAGTCGGCAGATCACACAGGTGTATGGATTCTACGACGAATGCCTACGAAAGTATGGAAGTGCAAATGTCTGGAAGATCTTCACCGATCTTTTTGACTATTTTCCATTGACAGCATTGGTTGAATCAGAGATTTTCTGCCTCCATGGTGGTTTATCGCCATCAATCGACAATCTTGATAGTGTTCGCAGCTTAGATCGTGTTCAAGAGGTCCCTCATGAGGGACCAATGTGTGATCTTCTATGGTCTGACCCGGATGATCGATGCGGTTGGGGCATATCTCCTCGTGGTGCTGGCTACACTTTTGGCCAGGACATATCGGAGCAGTTTAACCATACCAATAATCTCAAACTTGTAGCCCGGGCTCATCAATTAGTTATGGAAAAATATAACTGGGCGCACGAACAAAAGGTCGTGACCATATTCAGTGCACCTAATTATTGTTATCGCTGTGGCAACATGGCATCCATCCTGGAGGTTGATGACTGCAGGAATCACACATTTATTCAGTTTGAACCAGCTCCTAGGAGAGGTGAACCAGATGTGACACGGAGAACACCTGATTATTTCCTTTAAATTATCTGTTGTAATTTGTATTGTTTTGTTTCTTTTGTTTCTCTAAGACCGCAATAGTGA GCGCTGGTCAGTAAAATTTTGTTGGATCCCTTTG                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB656890             [                                                                                                                                                                                                                                                                                                                                                     TGATCTAGTAGAGCTCTTTCGGATTGGTGGGAAGTGTCCAGATACAAATTATTTGTTTATGGGAGATTATGTAGATCGTGGCTACTATTCTGTTGAGACTGTTACACTTTTGGTTGCACTGAAGGTGCGCTACCCACAGCGGATTACAATCCTTCGTGGAAACCATGAGAGTCGGCAGATCACACAGGTGTATGGATTCTACGACGAATGCCTACGAAAGTATGGAAGTGCAAATGTCTGGAAGATCTTCACCGATCTTTTTGACTATTTTCCATTGACAGCATTGGTTGAATCAGAGATTTTCTGCCTCCATGGTGGTTTATCGCCATCAATCGACAATCTTGATAGTGTTCGCAGCTTAGATCGTGTTCAAGAGGTCCCTCATGAGGGACCAATGTGTGATCTTCTATGGTCTGACCCGGATGATCGATGCGGTTGGGGCATATCTCCTCGTGGTGCTGGCTACACTTTTGGCCAGGACATATCGGAGCAGTTTAACCATACCAATAATCTCAAACTTGTAGCCCGGGCTCATCAATTAGTTATGGAAAAATATAACTGGGCGCACGAACAAAAGGTCGTGACCATATTCAGTGCACCTAATTATTGTTATCGCTGTGGCAACATGGCATCCATCCTGGAGGTTGATGACTGCAGGAATCACACATTTATTCAGTTTGAACCAGCTCCTAGGAGAGGTGAACCAGATGTGACACGGAGAACACCTGATTATTTCCTTTAAATTATCTGTTGTAATTTGTATTGTTTTGTTTCTTTTGTTTCTCTAAGACCGCAATAG GAGGCGCTGGTCAGTAAAATTTTGTTGGAT                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB652287             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAATCTTGATAGTGTTCGCAGCTTAGATCGTGTTCAAGAGGTCCCTCATGAGGGACCAATGTGTGATCTTCTATGGTCTGACCCGGATGATCGATGCGGTTGGGGCATATCTCCTCGTGGTGCTGGCTACACTTTTGGCCAGGACATATCGGAGCAGTTTAACCATACCAATAATCTCAAACTTGTAGCCCGGGCTCATCAATTAGTTATGGAAGGATATAACTGGGCGCACGAACAAAAGGTCGTGACCATATTCAGTGCACCTAATTATTGTTATCGCTGTGGCAACATGGCATCCATCCTGGAGGTTGATGACTGCAGGAATCACACATTTATTCAGTTTGAACCAGCTCCTAGGAGAGGTGAACCAGATGTGACACGGAGAACACCTGATTATTTCCTTTAAATTATCTGTTGTAATTTGTATTGTTTTGTTTCTTTTGTTTCTCTAAGACCGCAATAGTGA GTGCTGGTCAGTAAAATTTTGTTGGATCCCTTTGGTAACTAAACTGGCCAGCGATAGCATGAGAATGCCGATGCCCAAAAAAAATGTGAAACTTATGCCCCTCATTGATCATTGTGAGAATGGTGCTGTCATCCAGGATGCAACGCATTGCATACGATTCAGTCTCTTACCCACCCTTCCCAAGCCATGTTTAGGTGGCATTGTGTTGACAGATATCAAAATTCCATTTTGGTATAAGCTGCTTGAGTTATGTATTGGCTGGTTTTGTAACTGATGTGCTTGGCCCTTCTATCATTAAGGACAGACAAGCTGATCTCTCGGTTGCAAATA]
[-] EMBL CF309712             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCGATGCGGTTGGGGCATATCTCCTCGTGGTGCTGGCTACACTTTTGGCCAGGACATATCGGAGCAGTTTAACCATACCAATAATCTCAAACTTGTAGCCCGGGCTCATCAATTAGTTATGGAAGGATATAACTGGGCGCACGAACAAAAGGTCGTGACCATATTCAGTGCACCTAATTATTGTTATCGCTGTGGCAACATGGCATCCATCCTGGAGGTTGATGACTGCAGGAATCACACATTTATTCAGTTTGAACCAGCTCCTAGGAGAGGTGAACCAGATGTGACACGGAGAACACCTGATTATTTCCTTTAAATTATCTGTTGTAATTTGTATTGTTTTGTTTCTTTTGTTTCTCTAAGACCGCAATAGTGA GTGCTGGTCAGTAAAATTTTGTTGGATCCCTTTGGTAACTAAACTGGCCAGCGATAGCATGAGAATGCCGATGCCCAAAAAAAATGTGAAACTTATGCCCCTCATTGATCATTGTGAGAATGGTGCTGTCAaaaaa                                                                                                                                                                                                  ]




>consensus_12350#0
CGCCCCCCAACCGCATCTCAATCTCTCTCCTCTCTCTCTCTCTCCAGCTCGCCTCCCCCT
CGCCGGCGACGAGCTCTCCCCCGGCTAGGGTTAGACCAGGTGCCCCTCTTGTCTGCGGCG
GAGGAGGTGGGAGGAAGGATGGAGGAGTCCGTGGGCTCGCGCGGCGGCGGCGGCGGCGGC
CTGGACGCCCAGATCGAGCAGCTCATGGAGTGCCGCCCGCTCTCCGAGCCCGAGGTCAAG
ACGTTGTGCGAGAAGGCGAAGGAGATATTGATGGAAGAAAGCAACGTTCAGCCAGTTAAG
AGCCCAGTCACAATTTGTGGTGATATCCATGGGCAATTCCATGATCTAGTAGAGCTCTTT
CGGATTGGTGGGAAGTGTCCAGATACAAATTATTTGTTTATGGGAGATTATGTAGATCGT
GGCTACTATTCTGTTGAGACTGTTACACTTTTGGTTGCACTGAAGGTGCGCTACCCACAG
CGGATTACAATCCTTCGTGGAAACCATGAGAGTCGGCAGATCACACAGGTGTATGGATTC
TACGACGAATGCCTACGAAAGTATGGAAGTGCAAATGTCTGGAAGATCTTCACCGATCTT
TTTGACTATTTTCCATTGACAGCATTGGTTGAATCAGAGATTTTCTGCCTCCATGGTGGT
TTATCGCCATCAATCGACAATCTTGATAGTGTTCGCAGCTTAGATCGTGTTCAAGAGGTC
CCTCATGAGGGACCAATGTGTGATCTTCTATGGTCTGACCCGGATGATCGATGCGGTTGG
GGCATATCTCCTCGTGGTGCTGGCTACACTTTTGGCCAGGACATATCGGAGCAGTTTAAC
CATACCAATAATCTCAAACTTGTAGCCCGGGCTCATCAATTAGTTATGGAAGGATATAAC
TGGGCGCACGAACAAAAGGTCGTGACCATATTCAGTGCACCTAATTATTGTTATCGCTGT
GGCAACATGGCATCCATCCTGGAGGTTGATGACTGCAGGAATCACACATTTATTCAGTTT
GAACCAGCTCCTAGGAGAGGTGAACCAGATGTGACACGGAGAACACCTGATTATTTCCTT
TAAATTATCTGTTGTAATTTGTATTGTTTTGTTTCTTTTGTTTCTCTAAGACCGCAATAG
TGAGTGCTGGTCAGTAAAATTTTGTTGGATCCCTTTGGTAACTAAACTGGCCAGCGATAG
CATGAGAATGCCGATGCCCAAAAAAAATGTGAAACTTATGCCCCTCATTGATCATTGTGA
GAATGGTGCTGTCATCCAGGATGCAACGCATTGCATACGATTCAGTCTCTTACCCACCCT
TCCCAAGCCATGTTTAGGTGGCATTGTGTTGACAGATATCAAAATTCCATTTTGGTATAA
GCTGCTTGAGTTATGTATTGGCTGGTTTTGTAACTGATGTGCTTGGCCCTTCTATCATTA
AGGACAGACAAGCTGATCTCTCGGTTGCAAATA

consensusID : consensus_12350#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 647
fasta sequence

                              [CCAGGACATATCGGAGCAGTTTAACCATACCAATAATCTCAAACTTGTAGCCCGGGCTCATCAATTAGTTATGGAAGGATATAACTGGGCGCACGAACAAAAGGTCGTGACCATATTCAGTGCACCTAATTATTGTTATCGCTGTGGCAACATGGCATCCATCCTGGAGGTTGATGACTGCAGGAATCACACATTTATTCAGTTTGAACCAGCTCCTAGGAGAGGTGAACCAGATGTGACACGGAGAACACCTGATTATTTCCTTTAAATTATCTGTTGTAATTTGTATTGTTTTGTTTCTTTTGTTTCTCTAAGACCGCAATAGTGAGTGCTGGTCAGTAAAATTTTGTTGGATCCCTTTGGTAACTAAACTGGCCAGCGATAGCATGAGAATGCCGATGCCCAAAAAAAATGTGAAACTTATGCCCCTCATTGATCATTGTGAGAATGGTGCTGTCATCCAGGATGCAACGCATTGCATACGATTCAGTTTTTTACCCACCCTTCCCAAGCCATGTTTAGGTGGCATTGTGTTGACAGATATCAAAATTCCATTTTGGTATAAGCTGCTTGAGTTATGTATTGGCTGGTTTTGTAACTGATGTGCTTGGCCCTTTTATCATTAATGACAGCCCTTTTAAGGTTTC]

[-] EMBL CB645571             [CCAGGACATATCGGAGCAGTTTAACCATACCAATAATCTCAAACTTGTAGCCCGGGCTCATCAATTAGTTATGGAAGGATATAACTGGGCGCACGAACAAAAGGTCGTGACCATATTCAGTGCACCTAATTATTGTTATCGCTGTGGCAACATGGCATCCATCCTGGAGGTTGATGACTGCAGGAATCACACATTTATTCAGTTTGAACCAGCTCCTAGGAGAGGTGAACCAGATGTGACACGGAGAACACCTGATTATTTCCTTTAAATTATCTGTTGTAATTTGTATTGTTTTGTTTCTTTTGTTTCTCTAAGACCGCAATAGTGAGTGCTGGTCAGTAAAATTTTGTTGGATCCCTTTGGTAACTAAACTGGCCAGCGATAGCATGAGAATGCCGATGCCCAAAAAAAATGTGAAACTTATGCCCCTCATTGATCATTGTGAGAATGGTGCTGTCATCCAGGATGCAACGCATTGCATACGATTCAGTTTTTTACCCACCCTTCCCAAGCCATGTTTAGGTGGCATTGTGTTGACAGATATCAAAATTCCATTTTGGTATAAGCTGCTTGAGTTATGTATTGGCTGGTTTTGTAACTGATGTGCTTGGCCCTTTTATCATTAATGACAGCCCTTTTAAGGTTTC]




>consensus_12350#1
CCAGGACATATCGGAGCAGTTTAACCATACCAATAATCTCAAACTTGTAGCCCGGGCTCA
TCAATTAGTTATGGAAGGATATAACTGGGCGCACGAACAAAAGGTCGTGACCATATTCAG
TGCACCTAATTATTGTTATCGCTGTGGCAACATGGCATCCATCCTGGAGGTTGATGACTG
CAGGAATCACACATTTATTCAGTTTGAACCAGCTCCTAGGAGAGGTGAACCAGATGTGAC
ACGGAGAACACCTGATTATTTCCTTTAAATTATCTGTTGTAATTTGTATTGTTTTGTTTC
TTTTGTTTCTCTAAGACCGCAATAGTGAGTGCTGGTCAGTAAAATTTTGTTGGATCCCTT
TGGTAACTAAACTGGCCAGCGATAGCATGAGAATGCCGATGCCCAAAAAAAATGTGAAAC
TTATGCCCCTCATTGATCATTGTGAGAATGGTGCTGTCATCCAGGATGCAACGCATTGCA
TACGATTCAGTTTTTTACCCACCCTTCCCAAGCCATGTTTAGGTGGCATTGTGTTGACAG
ATATCAAAATTCCATTTTGGTATAAGCTGCTTGAGTTATGTATTGGCTGGTTTTGTAACT
GATGTGCTTGGCCCTTTTATCATTAATGACAGCCCTTTTAAGGTTTC

consensusID : consensus_12350#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 548
fasta sequence

                              [TCGCGCCCCCCAACCGCATCTCAATCTCTCTCCTCTCTCTCTCTCTCCAGCTCGCCTCCCCCTCGCCGGCGACGAGCTCTCCCCCGGCTAGGGTTAGACCAGGTGCCCCTCTTGTCTGCGGCGGAGGAGGTGGGAGGAAGGATGGAGGAGTCCGTGGGCTCGCGCGGCGGCGGCGGCGGCGGCCTGGACGCCCAGATCGAGCAGCTCATGGAGTGCCGCCCGCTCTCCGAGCCCGAGGTCAAGACGTTGTGCGAGAAGGCGAAGGAGATATTGATGGAAGAAAGCAACGTTCAGGTACGGTGGAGCTCTCCTGCGATTATGCCATGCCCTGCAGTATGATGATGGTATGCGTGCTGGGCTGAAAGTATTGATTGCCGGTTGCTTCTGATAAAAATGGTGACTGTGTGTGTGGCTCTAATCAGCCCGAGTAACACCAGCGATATGGTGACTGTGCTGTTTGTAGTTGGCATGCTCATTTCAGTTTTTATTGTGAGAGGATCTAGCTCGATATGGACATGAAAAATAATGGTTTTTTGCGGTATCATGCT]

[+] EMBL AK109250             [TCGCGCCCCCCAACCGCATCTCAATCTCTCTCCTCTCTCTCTCTCTCCAGCTCGCCTCCCCCTCGCCGGCGACGAGCTCTCCCCCGGCTAGGGTTAGACCAGGTGCCCCTCTTGTCTGCGGCGGAGGAGGTGGGAGGAAGGATGGAGGAGTCCGTGGGCTCGCGCGGCGGCGGCGGCGGCGGCCTGGACGCCCAGATCGAGCAGCTCATGGAGTGCCGCCCGCTCTCCGAGCCCGAGGTCAAGACGTTGTGCGAGAAGGCGAAGGAGATATTGATGGAAGAAAGCAACGTTCAGGTACGGTGGAGCTCTCCTGCGATTATGCCATGCCCTGCAGTATGATGATGGTATGCGTGCTGGGCTGAAAGTATTGATTGCCGGTTGCTTCTGATAAAAATGGTGACTGTGTGTGTGGCTCTAATCAGCCCGAGTAACACCAGCGATATGGTGACTGTGCTGTTTGTAGTTGGCATGCTCATTTCAGTTTTTATTGTGAGAGGATCTAGCTCGATATGGACATGAAAAATAATGGTTTTTTGCGGTATCATGCT]




>consensus_12350#2
TCGCGCCCCCCAACCGCATCTCAATCTCTCTCCTCTCTCTCTCTCTCCAGCTCGCCTCCC
CCTCGCCGGCGACGAGCTCTCCCCCGGCTAGGGTTAGACCAGGTGCCCCTCTTGTCTGCG
GCGGAGGAGGTGGGAGGAAGGATGGAGGAGTCCGTGGGCTCGCGCGGCGGCGGCGGCGGC
GGCCTGGACGCCCAGATCGAGCAGCTCATGGAGTGCCGCCCGCTCTCCGAGCCCGAGGTC
AAGACGTTGTGCGAGAAGGCGAAGGAGATATTGATGGAAGAAAGCAACGTTCAGGTACGG
TGGAGCTCTCCTGCGATTATGCCATGCCCTGCAGTATGATGATGGTATGCGTGCTGGGCT
GAAAGTATTGATTGCCGGTTGCTTCTGATAAAAATGGTGACTGTGTGTGTGGCTCTAATC
AGCCCGAGTAACACCAGCGATATGGTGACTGTGCTGTTTGTAGTTGGCATGCTCATTTCA
GTTTTTATTGTGAGAGGATCTAGCTCGATATGGACATGAAAAATAATGGTTTTTTGCGGT
ATCATGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12350#0      CGCCCCCCAACCGCATCTCAATCTCTCTCCTCTCTCTCTCTCTCCAGCTCGCCTCCCCCT 60
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      CGCCGGCGACGAGCTCTCCCCCGGCTAGGGTTAGACCAGGTGCCCCTCTTGTCTGCGGCG 120
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      GAGGAGGTGGGAGGAAGGATGGAGGAGTCCGTGGGCTCGCGCGGCGGCGGCGGCGGCGGC 180
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      CTGGACGCCCAGATCGAGCAGCTCATGGAGTGCCGCCCGCTCTCCGAGCCCGAGGTCAAG 240
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      ACGTTGTGCGAGAAGGCGAAGGAGATATTGATGGAAGAAAGCAACGTTCAGCCAGTTAAG 300
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      AGCCCAGTCACAATTTGTGGTGATATCCATGGGCAATTCCATGATCTAGTAGAGCTCTTT 360
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      CGGATTGGTGGGAAGTGTCCAGATACAAATTATTTGTTTATGGGAGATTATGTAGATCGT 420
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      GGCTACTATTCTGTTGAGACTGTTACACTTTTGGTTGCACTGAAGGTGCGCTACCCACAG 480
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      CGGATTACAATCCTTCGTGGAAACCATGAGAGTCGGCAGATCACACAGGTGTATGGATTC 540
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      TACGACGAATGCCTACGAAAGTATGGAAGTGCAAATGTCTGGAAGATCTTCACCGATCTT 600
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      TTTGACTATTTTCCATTGACAGCATTGGTTGAATCAGAGATTTTCTGCCTCCATGGTGGT 660
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      TTATCGCCATCAATCGACAATCTTGATAGTGTTCGCAGCTTAGATCGTGTTCAAGAGGTC 720
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      CCTCATGAGGGACCAATGTGTGATCTTCTATGGTCTGACCCGGATGATCGATGCGGTTGG 780
consensus_12350#1      ------------------------------------------------------------
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      GGCATATCTCCTCGTGGTGCTGGCTACACTTTTGGCCAGGACATATCGGAGCAGTTTAAC 840
consensus_12350#1      -----------------------------------CCAGGACATATCGGAGCAGTTTAAC 25
consensus_12350#2      ------------------------------------------------------------
                                                                                   

consensus_12350#0      CATACCAATAATCTCAAACTTGTAGCCCGGGCTCATCAATTAGTTATGGAAGGATATAAC 900
consensus_12350#1      CATACCAATAATCTCAAACTTGTAGCCCGGGCTCATCAATTAGTTATGGAAGGATATAAC 85
consensus_12350#2      -----------------------------------------------------------T 1
                                                                                   

consensus_12350#0      TGGGCGCACGAACAAAAGGTCG-TGACCATATTCAGTGCACCTAATTA--TTGTTATCGC 957
consensus_12350#1      TGGGCGCACGAACAAAAGGTCG-TGACCATATTCAGTGCACCTAATTA--TTGTTATCGC 142
consensus_12350#2      CGCGCCCCCCAACCGCATCTCAATCTCTCTCCTCTCTCTCTCTCTCCAGCTCGCCTCCCC 61
                        * ** * * ***   *  **  *  *  *  **  *    **    *  * *    * *

consensus_12350#0      TGTGGCAACATGGCATCCATCCTGGAGGTTGATGACTGCAGGAATCACACATTTATTCAG 1017
consensus_12350#1      TGTGGCAACATGGCATCCATCCTGGAGGTTGATGACTGCAGGAATCACACATTTATTCAG 202
consensus_12350#2      CTCGCCGGCGACGAGCTCTCCCCCGGCTAGGGTTAGACCAGGTGCCCCTCTTGTCTGCGG 121
                          * *  *   *    *  **  *     * * *   ****   * * * * * * * *

consensus_12350#0      TTTGAACCAGCTCCTAGGAGAGGTGAACCAGAT-GTGA-CACGGAGAACACCTGATTATT 1075
consensus_12350#1      TTTGAACCAGCTCCTAGGAGAGGTGAACCAGAT-GTGA-CACGGAGAACACCTGATTATT 260
consensus_12350#2      C--GGAGGAGGTGGGAGGAAGGATGGAGGAGTCCGTGGGCTCGCGCGGCGGCGGCGGCGG 179
                          * *  ** *   ****  * ** *  **   ***  * **     *  * *      

consensus_12350#0      TCCTTTAAATTATCTGTT---GTAATTTGTATTGTTTTGTTTCTTTTGTTTCTCTAAGAC 1132
consensus_12350#1      TCCTTTAAATTATCTGTT---GTAATTTGTATTGTTTTGTTTCTTTTGTTTCTCTAAGAC 317
consensus_12350#2      CGGCCTGGACGCCCAGATCGAGCAGCTCATGGAGTGCCGCCCGCTCTCCGAGCCCGAGGT 239
                            *  *    * * *   * *  *  *   **   *     * *      *  **  

consensus_12350#0      CGCAATA--GTGAGTGCTGGTCAGTAAAATTTTGTTGGATCCCTTTGGTAACTAAACTGG 1190
consensus_12350#1      CGCAATA--GTGAGTGCTGGTCAGTAAAATTTTGTTGGATCCCTTTGGTAACTAAACTGG 375
consensus_12350#2      CAAGACGTTGTGCGAGAAGGCGAAGGAGATATTGATGGAAGAAAGCAACGTTCAGGTACG 299
                       *   *    *** * *  **  *   * ** *** ****              *     *

consensus_12350#0      CCAGCGATAGCATGAGAATGC-CGATGCCC---AAAAAAAATGTGAAACTTATGCCCCTC 1246
consensus_12350#1      CCAGCGATAGCATGAGAATGC-CGATGCCC---AAAAAAAATGTGAAACTTATGCCCCTC 431
consensus_12350#2      GTGGAGCTCTCCTGCGATTATGCCATGCCCTGCAGTATGATGATGGTATGCGTGCTGGGC 359
                          * * *  * ** ** *   * ******   *  *  *   **  *    ***    *

consensus_12350#0      ATTGATCATTGTGAGAATGGTGCTGTCATCCAGGATGCAACGCATTGCATACGATTCAGT 1306
consensus_12350#1      ATTGATCATTGTGAGAATGGTGCTGTCATCCAGGATGCAACGCATTGCATACGATTCAGT 491
consensus_12350#2      TGAAAGTATTGATTGCCGGTTGCTTCTGATAAAAATG-GTGACTGTGTGTGTGGCTC--T 416
                           *  ****   *   * ****       *  ***     *  **  *  *  **  *

consensus_12350#0      CTCTTACCCACCCTTCCCAAGCCATGTTTAGGTGGCATTGTGT-TGACAGATATCAAAAT 1365
consensus_12350#1      TTTTTACCCACCCTTCCCAAGCCATGTTTAGGTGGCATTGTGT-TGACAGATATCAAAAT 550
consensus_12350#2      AATCAGCCCGAGTAACACCAGCGATATGGTGACTGTGCTGTTTGTAGTTGGCATGCTCAT 476
                             ***      * * *** ** *   *   *   *** * *    *  **    **

consensus_12350#0      TCCA--TTTTGGTATAAGCTGCTTGAGTTATGTATTGGCTGGTTTTGTAACTGATGTGCT 1423
consensus_12350#1      TCCA--TTTTGGTATAAGCTGCTTGAGTTATGTATTGGCTGGTTTTGTAACTGATGTGCT 608
consensus_12350#2      TTCAGTTTTTATTGTGAGAGGATCTAGCTCGATATGGACATGAAAAATAATGGTTTTTTG 536
                       * **  ****  * * **  * *  ** *   *** * *  *     ***  * * *   

consensus_12350#0      TGGCCCTTCTATCATTAAGGACAGACAAGCTGATCTCTCGGTTGCAAATA 1473
consensus_12350#1      TGGCCCTTTTATCATTAATGACAGCCCTTTTAAGGTTTC----------- 647
consensus_12350#2      CGGTATCATGCT-------------------------------------- 548
                        **        *