cluster # 12913

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12913 cluster # 12913 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12913#0 length = 1417 sequences # 8

consensus_12913#1 length = 453 sequences # 2
consensus_12913#2 length = 300 sequences # 1

consensusID : consensus_12913#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1417
fasta sequence

                              [ACCAAACCAGTGGCTAAGCCATCTTCGATCGCAGAAACCCGCGGTGCGTAGCGA-T-G-GCCCGGCCACGCCTCCTCCTCCTCCCTCTCCTCGCCGTCGCCGCGGCGGTGCTCTCGTCGCCGCTCGGCCGCGCGCTCGCCAAGACGGCCAAGAAGAGCAACGACATCGTCAATGGCCCACTGCTCACCTCCAAGATCAACGCCAAGCGCACGCTGATCGTCGGCCCCGAGGACGAGTTCAAGACCGTGCAGTCCGCCATCGACGCCGTGCCCGTCGGCAACACCGAGTGGGTCATCGTCCACCTCCGCTCCGGCATCTACAGGGAGAAAGTTATGATCCCGGAAACCAAGCCGTTCATCTTCGTGAGGGGCAACGGCAAGGGCC-GGACC-TCAATCAACCACGAGTCCGCTTCCTCCCACAACGCCGAGTCTGCCGCC-TTCACCGTGCACGCGGACAACGTCATCGTCTTCGGCCTCAGCATCA-GGAAC-AGCG-CGCGCGCCGGGC-TGCCCAACGTCCCGGAGGTGCGCACGGTGG-CCGCCA-TGG-TCGGCGGCGAC-AAGATTGCCTTCTACCACTGCGCGTTCTACAGCCCCCACCACACCCTCTTCGACGTCGCCGGCCGCCACTACTACGAGAGCTGTTACATCCAGGGCAACATCGACTTCATCTTCGGCGGCGGCCAGTCCATCTTCCAATGCCCGGAGATCTTCGTGAAGCCTGACCGGCGGACGGAGATCAAGGGCTCCATCACGGCGCAGAACCGCAAGCAGGAGGACGGCAGCGGCTTCGTCTTCATCAAGGGCAAGGTGTACGGCGTCGGGCAGGTGTACCTGGGCCGCGCCAACGAGGCCTACTCGCGCGTCATCTTCGCCGACACCTACCTCTCCAAGACCATCAACCCGGCCGGCTGGACCAGCTACGGCTACACCGGATCCACCGACCACGTGATGCTCGGGGAGTTCAACTGCACCGGGCCGGGCTCCGAAGCGACGAAGCGCGAGCCGTGGTCGCGGCAGCTCACCCAGGAGGAGGCCGACAAGTTCATCAACATCGACTTCATCAACGGCAAGGAGTGGCTCCCGGCGTACTACTACTGATCATATCCAACCAAAAAGAGAAACGTAGTAACATGTATGTGCGTGTGCATGCATGCTCTGGGCCGGCTAGCCGTAACCATGGTGTCAAGAGTTCTAAACTTCTAATCGAAACGGAAGCGCACTGGAACGATTGGTGTCTTTGCAGTAGGAAGATGGCAGATTTAATTTGTTGATCATGAGCTCGAAATGAACTTGCGCATTTTATTGCTTACAAGTTAGAACTGAGGCACATTGCTCGGTTTATGACTGTCCAGTGCATAGAACATCACATTTAATTTTCATGTGTATATTATATGCCCTAAATATATTATTTCTGCTACTTTTAA]

[+] EMBL AK100728             [ACCAAACCAGTGGCTAAGCCATCTTCGATCGCAGAAACCCGCGGTGCGTAGCGA T G GCCCGGCCACGCCTCCTCCTCCTCCCTCTCCTCGCCGTCGCCGCGGCGGTGCTCTCGTCGCCGCTCGGCCGCGCGCTCGCCAAGACGGCCAAGAAGAGCAACGACATCGTCAATGGCCCACTGCTCACCTCCAAGATCAACGCCAAGCGCACGCTGATCGTCGGCCCCGAGGACGAGTTCAAGACCGTGCAGTCCGCCATCGACGCCGTGCCCGTCGGCAACACCGAGTGGGTCATCGTCCACCTCCGCTCCGGCATCTACAGGGAGAAAGTTATGATCCCGGAAACCAAGCCGTTCATCTTCGTGAGGGGCAACGGCAAGGGCC GGACC TCAATCAACCACGAGTCCGCTTCCTCCCACAACGCCGAGTCTGCCGCC TTCACCGTGCACGCGGACAACGTCATCGTCTTCGGCCTCAGCATCA GGAAC AGCG CGCGCGCCGGGC TGCCCAACGTCCCGGAGGTGCGCACGGTGG CCGCCA TGG TCGGCGGCGAC AAGATTGCCTTCTACCACTGCGCGTTCTACAGCCCCCACCACACCCTCTTCGACGTCGCCGGCCGCCACTACTACGAGAGCTGTTACATCCAGGGCAACATCGACTTCATCTTCGGCGGCGGCCAGTCCATCTTCCAATGCCCGGAGATCTTCGTGAAGCCTGACCGGCGGACGGAGATCAAGGGCTCCATCACGGCGCAGAACCGCAAGCAGGAGGACGGCAGCGGCTTCGTCTTCATCAAGGGCAAGGTGTACGGCGTCGGGCAGGTGTACCTGGGCCGCGCCAACGAGGCCTACTCGCGCGTCATCTTCGCCGACACCTACCTCTCCAAGACCATCAACCCGGCCGGCTGGACCAGCTACGGCTACACCGGATCCACCGACCACGTGATGCTCGGGGAGTTCAACTGCACCGGGCCGGGCTCCGAAGCGACGAAGCGCGAGCCGTGGTCGCGGCAGCTCACCCAGGAGGAGGCCGACAAGTTCATCAACATCGACTTCATCAACGGCAAGGAGTGGCTCCCGGCGTACTACTACTGATCATATCCAACCAAAAAGAGAAACGTAGTAACATGTATGTGCGTGTGCATGCATGCTCTGGGCCGGCTAGCCGTAACCATGGTGTCAAGAGTTCTAAACTTCTAATCGAAACGGAAGCGCACTGGAACGATTGGTGTCTTTGCAGTAGGAAGATGGCAGATTTAATTTGTTGATCATGAGCTCGAAATGAACTTGCGCATTTTATTGCTTACAAGTTAGAACTGAGGCACATTGCTCGGTTTATGACTGTCCAGTGCATAGAACATCACATTTAATTTTCATGTGTATATTATATGCCCTAAATATATTATTTCTGCTACTTTTAA]
[+] EMBL AY343494             [                AGCCATCTTCGATCGCAGAAACCCGCGGTGCGTAGCGA T G GCCCGGCCACGCCTCCTCCTCCTCCCTCTCCTCGCCGTCGCCGCGGCGGTGCTCTCGTCGCCGCTCGGCCGCGCGCTCGCCAAGACGGCCAAGAAGAGCAACGACATCGTCAATGGCCCACTGCTCACCTCCAAGATCAACGCCAAGCGCACGCTGATCGTCGGCCCCGAGGACGAGTTCAAGACCGTGCAGTCCGCCATCGACGCCGTGCCCGTTGGCAACACCGAGTGGGTCATCGTCCACCTCCGCTCCGGCATCTACAGGGAGAAAGTTATGATCCCGGAAACCAAGCCGTTCATCTTCGTGAGGGGCAACGGCAAGGGCC GGACC TCAATCAACCACGAGTCCGCTTCCTCCCACAACGCCGAGTCTGCCGCC TTCACCGTGCACGCGGACAACGTCATCGTCTTCGGCCTCAGCATCAGGGAACAAGCGCCGCGCGCCGGGCTTGCCCAACGTCCCGGAGGTGCGCACGGTGGCCCGCCATTGGTTCGGCGGCGACAAAGATTGCCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C98770               [                        TCGATCGCAGAAACCCGCGGTGCGTA CGA TNN GCCCGGCCACGCCTCCTCCTCCTCCCTCTCCTCGCCGTCGCCGCGGCGGTGCTCTCGTCGCCGCTCGGCCGCGCGCTCGCCAAGACGGCCAAGAAGAGCAACGACATCGTCAATGGCCCACTGCTCACCTCCAAGATCAACGCCAAGCGCACGCTGATCGTCGGCCCCGAGGACGAGTTCAAGACCGTGCAGTCCGCCATCGACGCCGTGCCCGTCGGCAACACCGAGTGGGTCATCGTCCACCTCCGCTCCGGCATCTACAGGGAGAAAGTTATGATCCCGGAAACCAAGCCGTTCATCTTCGTGAGGGGCAACGGCAAGGGCCGGGACCTTCAATCAACCACGAGTCCGCTTCCTCCCACAACGCCGAGTCTGCCGCCTTTCAACGTGCACGCGGACAACGTCATCGTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU165322             [                                        GCGGTGCGTA NGANT G GCCCGGCCACGCCTCCTCCTCCTCCCTCTCCTCGCCGTCGCCGCGG GGTGCTCTCGTCGCCGCTCGGNCGCGCGCTCGCNAAGACGGCCAAGAAGAGCAACGACATCGTNAATGGCCCACTGCTCACCTCCAAGATCAACGCCAAGCGCACGCTGATCGTCGGCCCCGAGGACGAGTTCAAGACCGTGCAGTCCGCCATCGACGCCGTGCCCGTCGGCAACACCGAGTGGGTCATCGTCCACCTCCGCTCCGGCATCTACAGGGAGAAAGTTATGATCCCGGAAACCAAGCCGTTNATCTTCGTGAGGGGCAACGGCAAGGGCC GGACC TCAATCAANCACGAGTCCGCTTTCTTCNACAACGTCGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU162166             [                                        GCGGTGCGTAG GA T GNGCCCGGCCACGCCTCCTCCTCCTCCCTCTCCTCGCCGTCGCCGCGG GGTGCTCTCGTCGCCGCTCGGNCGCGCGCTCGCCAAGACGGCCAAGAAGAGCAACGACATCGTCAATGGCCCACTGCTCACCTCCAAGATCAACGCCAAGCGCACGCTGATCGTCGGCCCCGAGGACGAGTTCAAGACCGTGCAGTCCGCCATCGACGCCGTGCCCGTCGGCAACACCGAGTGGGTCATCGTCCACCTCCGCTCCGGCATCTACAGGGAGAAAGTTATGATCCCGGAAACCAAGCCGTTCATCTTCGTGAGGGGCAACGGCAAGGGCC GGACC TCAATCAACCACGAGTCCGTTTTCTTCCAaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU064877             [                                        GCGGTGCGTA NGA T GNGCCCGGCCACGNCTCCTCCTCCTCCCTCTCCTCGCCGTCGCCGCGGCGGTGCTCTCGTCGCCGCTCGGCCGCGCGCTCGCCAAGACGGCCAAGAAGAGCAACGACATCGTCAATGGCCCACTGCTCACCTCCAAGATCAACGCCAAGCGCACGCTGATCGTCGGCCCCGAGGACGAGTTCAAGACCGTGCAGTCCGCCATCGACGCCGTGCCCGTCGGCAACACCGAGTGGGTCATCGTCCACCTCCGCTCCGGCATCTACAGGGAGAAAGTTATGATCCCGGAAACCAAGCCGTTCATCTTCGTGAGGGGCAACGGCAAGGGCn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C72456               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATCA GGAAC AGCG CGCGCGCCGGGC TGCCCAACGTCCCGGAGGTGCGCACGGTGG CCGCCA TGG TCGGCGGCGAC AAGATTGCCTTCTACCACTGCGCGTTCTACAGCCCCCACCACACCCTCTTCGACGTCGCCGGCCGCCACTACTACGAGAGCTGTTACATCCAGGGCAACATCGACTTCATCTTCGGCGGCGGCCAGTCCATCTTCCAATGCCCGGAGATCTTCGTGAAGCCTGACCGGCGGACGGAGATCAAGGGCTCCATCACGGCGCAGAACCGCAAGCAGGAGGACGGCAGCGGCTTCGTCTTCATCAAGGGCAANGTGTACGGCGTCGGGCANGTGTACTTGGGCCGCGCCAACGAAGGCTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA767425             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCGCAGAACCGCAAGCAAGAGGACGGCAGCGGCTTCGTCTTCATCAAGGGCAAGGTGTACGGCGTCGGGCAGGTGTACCTGGGCCGCGCCAACGAGGCCTACTCGCGCGTCATCTTCGCCGACACCTACCTCTCCAAGACCATCAACCCGGCCGGCTGGACCAGCTACGGCTACACCGGATCCACCGACCACGTGATGCTCGGGGAGTTCAACTGCACCGGGCCGGGCTCCGAAGCGACGAAGCGCGAGCCGTGGTCGCGGCAGCTCACCCAGGAGGAGGCCGACAAGTTCATCAACATCGACTTCATCAACGGCAAGGAGTGGCTCCCGGCGTACTACTACTGATCATATCCAACCAAAAAGAGAAACGTAGTAACATGTATGTGCGTGTGCATGCATGCTCTGGGCCGGCTAGCCGTAACCATGGTGTCAAGAGTTCTAAACTTCTAATCGAAACGGAAGCGCACTGGAACGATTGGTGTCTTTGCAGTAGGAAGATGGCAGATTTAATTTGTTGATCATGAGCTCGAAATGAACTTGCGCATTTTA                                                                                                                          ]




>consensus_12913#0
ACCAAACCAGTGGCTAAGCCATCTTCGATCGCAGAAACCCGCGGTGCGTAGCGATGGCCC
GGCCACGCCTCCTCCTCCTCCCTCTCCTCGCCGTCGCCGCGGCGGTGCTCTCGTCGCCGC
TCGGCCGCGCGCTCGCCAAGACGGCCAAGAAGAGCAACGACATCGTCAATGGCCCACTGC
TCACCTCCAAGATCAACGCCAAGCGCACGCTGATCGTCGGCCCCGAGGACGAGTTCAAGA
CCGTGCAGTCCGCCATCGACGCCGTGCCCGTCGGCAACACCGAGTGGGTCATCGTCCACC
TCCGCTCCGGCATCTACAGGGAGAAAGTTATGATCCCGGAAACCAAGCCGTTCATCTTCG
TGAGGGGCAACGGCAAGGGCCGGACCTCAATCAACCACGAGTCCGCTTCCTCCCACAACG
CCGAGTCTGCCGCCTTCACCGTGCACGCGGACAACGTCATCGTCTTCGGCCTCAGCATCA
GGAACAGCGCGCGCGCCGGGCTGCCCAACGTCCCGGAGGTGCGCACGGTGGCCGCCATGG
TCGGCGGCGACAAGATTGCCTTCTACCACTGCGCGTTCTACAGCCCCCACCACACCCTCT
TCGACGTCGCCGGCCGCCACTACTACGAGAGCTGTTACATCCAGGGCAACATCGACTTCA
TCTTCGGCGGCGGCCAGTCCATCTTCCAATGCCCGGAGATCTTCGTGAAGCCTGACCGGC
GGACGGAGATCAAGGGCTCCATCACGGCGCAGAACCGCAAGCAGGAGGACGGCAGCGGCT
TCGTCTTCATCAAGGGCAAGGTGTACGGCGTCGGGCAGGTGTACCTGGGCCGCGCCAACG
AGGCCTACTCGCGCGTCATCTTCGCCGACACCTACCTCTCCAAGACCATCAACCCGGCCG
GCTGGACCAGCTACGGCTACACCGGATCCACCGACCACGTGATGCTCGGGGAGTTCAACT
GCACCGGGCCGGGCTCCGAAGCGACGAAGCGCGAGCCGTGGTCGCGGCAGCTCACCCAGG
AGGAGGCCGACAAGTTCATCAACATCGACTTCATCAACGGCAAGGAGTGGCTCCCGGCGT
ACTACTACTGATCATATCCAACCAAAAAGAGAAACGTAGTAACATGTATGTGCGTGTGCA
TGCATGCTCTGGGCCGGCTAGCCGTAACCATGGTGTCAAGAGTTCTAAACTTCTAATCGA
AACGGAAGCGCACTGGAACGATTGGTGTCTTTGCAGTAGGAAGATGGCAGATTTAATTTG
TTGATCATGAGCTCGAAATGAACTTGCGCATTTTATTGCTTACAAGTTAGAACTGAGGCA
CATTGCTCGGTTTATGACTGTCCAGTGCATAGAACATCACATTTAATTTTCATGTGTATA
TTATATGCCCTAAATATATTATTTCTGCTACTTTTAA

consensusID : consensus_12913#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 453
fasta sequence

                              [GGTGTACGGCGTCGGGCAGGTGTACCTGGGCCNCGCCAAACGAGGCCTACTCGCGCGTCATCTTCGCCGAACACCTACCTCTCCAAGACCATCAACCCGGCCGGCTGGACCAGCTACGGCTACACCGGATCCACCGACCACGTGATGCTCGGGGAGTTNAACTGCACCGGGCCGGGCTCCGAAGCGACGAAGCGCGAGCCGTGGTCGCGGCAGCTCACCCAGGAGGAGGCCGACAAGTTCATCAACATCGACTTCATCAACGGCAAGGAGTGGCTCCCGGCGTACTACTACTGATCATATCCAACCAAAAAGAGAAACGTAGTAACATGTATGTGCGTGTGCATGCATGCTCTGGGCCGGCTAGCCGTAACCATGGTGTCAAGAGTTCTAAACTTCTAATCGAAACGGAAGCGCACTGGAACGATTGGTGTCTTTGCNGTAAAAAAAAAAAAA]

[+] EMBL C98437               [GGTGTACGGCGTCGGGCAGGTGTACCTGGGCCNCGCCAAACGAGGCCTACTCGCGCGTCATCTTCGCCGAACACCTACCTCTCCAAGACCATCAACCCGGCCGGCTGGACCAGCTACGGCTACACCGGATCCACCGACCACGTGATGCTCGGGGAGTTNAACTGCACCGGGCCGGGCTCCGAAGCGACGAAGCGCGAGCCGTGGTCGCGGCAGCTCACCCAGGAGGAGGCCGACAAGTTCATCAACATCGACTTCATCAACGGCAAGGAGTGGCTCCCGGCGTACTACTACTGATCATATCCAACCAAAAAGAGAAACGTAGTAACATGTATGTGCGTGTGCATGCATGCTCTGGGCCGGCTAGCCGTAACCATGGTGTCAAGAGTTCTAAACTTCTAATCGAAACGGAAGCGCACTGGAACGATTGGTGTCTTTGCNGTAAAAAAAAAAAAA]
[+] EMBL C98436               [                                                                                                                                                                                    GAAGCGACGAANCNCGAGCCGTGGTCGCGGCAGCTCACCCAGGAGGAGGCCGACAAGTTCATCAACATCGACTTCATCAACGGCAAGGAGTGGCTCCCGGCGTACTACTACTGATCATATCCAACCAAAAAGAGAAACGTAGTAACATGTATGTGCGTGTGCATGCATGCTCTGGGCCGGCTAGCCGTAACCATGGTGTCAAGAGTTCTAAACTTCTAATCGAAACGGAAGCGCACTGGAACGATTGGTGTCTTTGCNGTAAAAAAAAAAAAA]




>consensus_12913#1
GGTGTACGGCGTCGGGCAGGTGTACCTGGGCCNCGCCAAACGAGGCCTACTCGCGCGTCA
TCTTCGCCGAACACCTACCTCTCCAAGACCATCAACCCGGCCGGCTGGACCAGCTACGGC
TACACCGGATCCACCGACCACGTGATGCTCGGGGAGTTNAACTGCACCGGGCCGGGCTCC
GAAGCGACGAAGCGCGAGCCGTGGTCGCGGCAGCTCACCCAGGAGGAGGCCGACAAGTTC
ATCAACATCGACTTCATCAACGGCAAGGAGTGGCTCCCGGCGTACTACTACTGATCATAT
CCAACCAAAAAGAGAAACGTAGTAACATGTATGTGCGTGTGCATGCATGCTCTGGGCCGG
CTAGCCGTAACCATGGTGTCAAGAGTTCTAAACTTCTAATCGAAACGGAAGCGCACTGGA
ACGATTGGTGTCTTTGCNGTAAAAAAAAAAAAA

consensusID : consensus_12913#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 300
fasta sequence

                              [CAAGNGTTNTAAACTTNTANTCGAAACGGAAGCNCCCTGGAACGATTGGTGTCTTTGCNNTNGGAAGNTGGCAGATTTAATTTGTTGATCATGNGCTCGAAATGAACTTGCGCNTTTTNTTGCTTACAAGTTNGNANTGNGGCNCATTGCNCGGTTTNTGACTGTCCAGTGCATAGAACATCNCATTTAATTTTCATGTGTNTATTNTATGCCCTAAATNTNTTATTTCTGCTNNTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU094143             [CAAGNGTTNTAAACTTNTANTCGAAACGGAAGCNCCCTGGAACGATTGGTGTCTTTGCNNTNGGAAGNTGGCAGATTTAATTTGTTGATCATGNGCTCGAAATGAACTTGCGCNTTTTNTTGCTTACAAGTTNGNANTGNGGCNCATTGCNCGGTTTNTGACTGTCCAGTGCATAGAACATCNCATTTAATTTTCATGTGTNTATTNTATGCCCTAAATNTNTTATTTCTGCTNNTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12913#2
CAAGNGTTNTAAACTTNTANTCGAAACGGAAGCNCCCTGGAACGATTGGTGTCTTTGCNN
TNGGAAGNTGGCAGATTTAATTTGTTGATCATGNGCTCGAAATGAACTTGCGCNTTTTNT
TGCTTACAAGTTNGNANTGNGGCNCATTGCNCGGTTTNTGACTGTCCAGTGCATAGAACA
TCNCATTTAATTTTCATGTGTNTATTNTATGCCCTAAATNTNTTATTTCTGCTNNTTTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12913#0      ACCAAACCAGTGGCTAAGCCATCTTCGATCGCAGAAACCCGCGGTGCGTAGCGATGGCCC 60
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      GGCCACGCCTCCTCCTCCTCCCTCTCCTCGCCGTCGCCGCGGCGGTGCTCTCGTCGCCGC 120
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      TCGGCCGCGCGCTCGCCAAGACGGCCAAGAAGAGCAACGACATCGTCAATGGCCCACTGC 180
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      TCACCTCCAAGATCAACGCCAAGCGCACGCTGATCGTCGGCCCCGAGGACGAGTTCAAGA 240
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      CCGTGCAGTCCGCCATCGACGCCGTGCCCGTCGGCAACACCGAGTGGGTCATCGTCCACC 300
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      TCCGCTCCGGCATCTACAGGGAGAAAGTTATGATCCCGGAAACCAAGCCGTTCATCTTCG 360
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      TGAGGGGCAACGGCAAGGGCCGGACCTCAATCAACCACGAGTCCGCTTCCTCCCACAACG 420
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      CCGAGTCTGCCGCCTTCACCGTGCACGCGGACAACGTCATCGTCTTCGGCCTCAGCATCA 480
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      GGAACAGCGCGCGCGCCGGGCTGCCCAACGTCCCGGAGGTGCGCACGGTGGCCGCCATGG 540
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      TCGGCGGCGACAAGATTGCCTTCTACCACTGCGCGTTCTACAGCCCCCACCACACCCTCT 600
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      TCGACGTCGCCGGCCGCCACTACTACGAGAGCTGTTACATCCAGGGCAACATCGACTTCA 660
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      TCTTCGGCGGCGGCCAGTCCATCTTCCAATGCCCGGAGATCTTCGTGAAGCCTGACCGGC 720
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      GGACGGAGATCAAGGGCTCCATCACGGCGCAGAACCGCAAGCAGGAGGACGGCAGCGGCT 780
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      TCGTCTTCATCAAGGGCAAGGTGTACGGCGTCGGGCAGGTGTACCTGGGCCGCGCCAA-C 839
consensus_12913#1      -------------------GGTGTACGGCGTCGGGCAGGTGTACCTGGGCCNCGCCAAAC 41
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      GAGGCCTACTCGCGCGTCATCTTCGCCGA-CACCTACCTCTCCAAGACCATCAACCCGGC 898
consensus_12913#1      GAGGCCTACTCGCGCGTCATCTTCGCCGAACACCTACCTCTCCAAGACCATCAACCCGGC 101
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      CGGCTGGACCAGCTACGGCTACACCGGATCCACCGACCACGTGATGCTCGGGGAGTTCAA 958
consensus_12913#1      CGGCTGGACCAGCTACGGCTACACCGGATCCACCGACCACGTGATGCTCGGGGAGTTNAA 161
consensus_12913#2      ------------------------CAAGNGTTNTAAACTTNTANTCGAAACGGAAGCNCC 36
                                               *          * *   *  *      ***      

consensus_12913#0      CTGCACCGGGCCGGGCTCCGAAGCGACGAAGCGCGAGCCGTGGTCGCGGCAGCTCACCCA 1018
consensus_12913#1      CTGCACCGGGCCGGGCTCCGAAGCGACGAAGCGCGAGCCGTGGTCGCGGCAGCTCACCCA 221
consensus_12913#2      CTGGAACGATTGGTGTCTTTGCNNTNGGAAGN--------TGGCAGATTTAATTTGTTGA 88
                       *** * **    * *            ****         ***  *    *  *     *

consensus_12913#0      GGAGGAGGCCGACAAGTTCATCAACATCGACTTCATCAACGGCAAGGAGTGGCTCCCGGC 1078
consensus_12913#1      GGAGGAGGCCGACAAGTTCATCAACATCGACTTCATCAACGGCAAGGAGTGGCTCCCGGC 281
consensus_12913#2      TCATGNGCTCGAAATGAACTTGCGCNTTTTNTTGCTTACAAGTTNGNANTGNGGCNCATT 148
                         * * *  *** * *  * *   * *    **  * *   *   * * **   * *   

consensus_12913#0      GTACTACTACTGATCATATCCAACCAAAAAGAGAAACGTAGTAACATGTATGTGCGTGTG 1138
consensus_12913#1      GTACTACTACTGATCATATCCAACCAAAAAGAGAAACGTAGTAACATGTATGTGCGTGTG 341
consensus_12913#2      GCNCGGTTTNTGAC--TGTCCAGTGCATAGAACATCNCATTTAATTTTCATGTGTNTAT- 205
                       *  *   *  ***   * ****    * *  * *       ***  *  *****  * * 

consensus_12913#0      CATGCATGCTCTGGGCCGGCTAGCCGTAACCATGGTGTCAAGAGTTCTAAACTTCTAATC 1198
consensus_12913#1      CATGCATGCTCTGGGCCGGCTAGCCGTAACCATGGTGTCAAGAGTTCTAAACTTCTAATC 401
consensus_12913#2      --TNTATGCCCTAAATNTNTTATTTCTGCTNNTTTTAAAAAAAAAAAAAAA-----AAAA 258
                         *  **** **        **    *     *  *   ** *     ***     **  

consensus_12913#0      GAAACGGAAGCGCACTGGAACGATTGGTGTCTTTGCAGTAGGAAGATGGCAGATTTAATT 1258
consensus_12913#1      GAAACGGAAGCGCACTGGAACGATTGGTGTCTTTGCNGTAAAAAAAAAAAAA-------- 453
consensus_12913#2      AAAAAAAAAAAAAAAAAAAAAAAAAA----------AAAAAAAAAAAAAAAA-------- 300
                        ***   **    *    **  *                *  ** *    *         

consensus_12913#0      TGTTGATCATGAGCTCGAAATGAACTTGCGCATTTTATTGCTTACAAGTTAGAACTGAGG 1318
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      CACATTGCTCGGTTTATGACTGTCCAGTGCATAGAACATCACATTTAATTTTCATGTGTA 1378
consensus_12913#1      ------------------------------------------------------------
consensus_12913#2      ------------------------------------------------------------
                                                                                   

consensus_12913#0      TATTATATGCCCTAAATATATTATTTCTGCTACTTTTAA 1417
consensus_12913#1      ---------------------------------------
consensus_12913#2      ---------------------------------------