|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13033#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2011 fasta sequence
[AAAAAAAGCGCACACAAGGACCTCCCCTGTGCCAAGCGGCCGCGCATCGCAGCCGAGACGAGCCGCCCCCCGCACCGCACTCTCCGCCGCCGGCGCCGCGCCGACCTCCTCCGCCGCGCCGCCTCCCCGGCGCGCGCCCCCGTCACCCTCTCTCGCCTCGCCGCCGCCGCCGCTGCCTCCTCGTGAGGGGGGACGGTGGTGGGGGCCTCTGCCCTATGGCGAGCGGCGACGGCGGCGACGACGCGGGCGTGAAGCGCGTGGCGGACCGCTACCTGAAGCGCGAGGTCCTGGGAGAGGGAACCTACGGCGTCGTCTTCAAGGCCGTCGACACCAAGACTGGGAATACAGTCGCAATAAAGAAAATCCGGCTAGGGAAGTACAAGGAAGGTGTCAATTTCACTGCATTGAGGGAAATTAAACTTCTTAAGGAGCTGAAAGATTCTAATATTATAGAGCTGATTGATGCTTTCCCTTACAAGGGAAACTTACATCTTGTATTTGAGTTCATGGA-GACTGATTTGGAAGCTGTCATACGAGATAGGAACATTGTATTATCTCCAGCTGATACAAAATCTTATATTCAGATGATGTTAAAAGGTTTAGCCTTCTGCCATAAGAAATGGGTGCTACACAGCTTAAGCTTGCTGACTTTGGTCTGGCGCGCATATTTGGGAGTCCAGAGCGGAACTTCACTCATCAGGTCTTTGCACGATGGTACCGAGCACCAGAATTATTATTTGGCACCAAGCAGTATGGATCTGCAGTTGATATTTGGGCTGCTGGTTGTATTTTTGCTGAACTGCTGCTTAGGCGACCGTTTCTCCAGGGTTCTAGTGACATTGATCAACTTGGGAAGATCTTTGCTGCATTTGGAACTCCAAAGTCTTCTCAATGGCCGGACATGGTTTATCTTCCAGATTATGTTGAATACCAATTTGTCTCTGCACCTCCACTTCGCTCATTGTTTCCAATGGCCAGTGATGATGCATTGGATCTTCTATCAAGAATGTTTACATATGATCCAAAAGCAAGAATTACAGCTCAGCAGGCTCTAGAACACCGGTACTTTTTATCAGTACCAGCGCCAACAAAACCATCACAGCTTCCAAGGCCACCACCTAAGGGTGATTCAGGGAATAACAAGATACCAGACTTGAACCTGCAGGACGGCCCTGTTGTTCTGTCCCCGCCAAGAAAGTTGCGCAGGGTGACTGCCCATGAAGGGATGGAAGTCCATATGCATCGGGCGGATAGAACAGAAGAGCATCCTTCAGGGGCAAGGCACATGGATGACATGTCCAGCCAGAGTTCTAGAATACCAATGTCAGTTGATGTTGGAGCTATTTTTGGGACACGACCTGCTCCTAGACCAACGTTAAACAGTGCCGACAAGTCTCGTTTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTA-AATCACCATTTTTTCCATACTGGCTTGTTGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATCTACCAACAAAAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATGGCACAGCCAACTATGCTGTTATCGTTTTTGACTACCAAAGCCGGCT-CAGGAAGAGGAAACTGAAGAGTTACGT-GTTACGATGCTAAT-TTACA-CCAGGACGTGCACAT-GCCAT-TT-C-AT-TTTGGCT-GGCATACATAAATCTGT-AATCTTT-AT-TGCATAGATGAGTTTGCTTGTGTGAGCATGTTTCTT-CCAGTGTTCGCAAAGATTATTATGAAGTTTATGTCTCAAGTTCTTTCTGGTGTCAATTTTCGTTCACTTCTTGTATGGACATTGAATTTTGATTGTTGTTTAGTCGGTCATCTTATTCTTAGGTACAGTAATTCTTGTAACCAGGAGCGGCTTATATTACCTGAGTATTCTGACACGTCTTCCTGCAATACGCTGTAACAATGCATGAGTGAAAAAAAAAAGAGAAAAATAAGAGCAACTTCTTTTGT]
[+] EMBL AK120162 [AAAAAAAGCGCACACAAGGACCTCCCCTGTGCCAAGCGGCCGCGCATCGCAGCCGAGACGAGCCGCCCCCCGCACCGCACTCTCCGCCGCCGGCGCCGCGCCGACCTCCTCCGCCGCGCCGCCTCCCCGGCGCGCGCCCCCGTCACCCTCTCTCGCCTCGCCGCCGCCGCCGCTGCCTCCTCGTGAGGGGGGACGGTGGTGGGGGCCTCTGCCCTATGGCGAGCGGCGACGGCGGCGACGACGCGGGCGTGAAGCGCGTGGCGGACCGCTACCTGAAGCGCGAGGTCCTGGGAGAGGGAACCTACGGCGTCGTCTTCAAGGCCGTCGACACCAAGACTGGGAATACAGTCGCAATAAAGAAAATCCGGCTAGGGAAGTACAAGGAAGGTGTCAATTTCACTGCATTGAGGGAAATTAAACTTCTTAAGGAGCTGAAAGATTCTAATATTATAGAGCTGATTGATGCTTTCCCTTACAAGGGAAACTTACATCTTGTATTTGAGTTCATGGA GACTGATTTGGAAGCTGTCATACGAGATAGGAACATTGTATTATCTCCAGCTGATACAAAATCTTATATTCAGATGATGTTAAAAGGTTTAGCCTTCTGCCATAAGAAATGGGTGCTACACAGCTTAAGCTTGCTGACTTTGGTCTGGCGCGCATATTTGGGAGTCCAGAGCGGAACTTCACTCATCAGGTCTTTGCACGATGGTACCGAGCACCAGAATTATTATTTGGCACCAAGCAGTATGGATCTGCAGTTGATATTTGGGCTGCTGGTTGTATTTTTGCTGAACTGCTGCTTAGGCGACCGTTTCTCCAGGGTTCTAGTGACATTGATCAACTTGGGAAGATCTTTGCTGCATTTGGAACTCCAAAGTCTTCTCAATGGCCGGACATGGTTTATCTTCCAGATTATGTTGAATACCAATTTGTCTCTGCACCTCCACTTCGCTCATTGTTTCCAATGGCCAGTGATGATGCATTGGATCTTCTATCAAGAATGTTTACATATGATCCAAAAGCAAGAATTACAGCTCAGCAGGCTCTAGAACACCGGTACTTTTTATCAGTACCAGCGCCAACAAAACCATCACAGCTTCCAAGGCCACCACCTAAGGGTGATTCAGGGAATAACAAGATACCAGACTTGAACCTGCAGGACGGCCCTGTTGTTCTGTCCCCGCCAAGAAAGTTGCGCAGGGTGACTGCCCATGAAGGGATGGAAGTCCATATGCATCGGGCGGATAGAACAGAAGAGCATCCTTCAGGGGCAAGGCACATGGATGACATGTCCAGCCAGAGTTCTAGAATACCAATGTCAGTTGATGTTGGAGCTATTTTTGGGACACGACCTGCTCCTAGACCAACGTTAAACAGTGCCGACAAGTCTCGTTTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTA AATCACCATTTTTTCCATACTGGCTTGTTGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATCTACCAACAAAAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATGGCACAGCCAACTATGCTGTTATCGTTTTTGACTACCAAAGCCGGCT CAGGAAGAGGAAACTGAAGAGTTACGT GTTACGATGCTAAT TTACA CCAGGACGTGCACAT GCCAT TT C AT TTTGGCT GGCATACATAAATCTGT AATCTTT AT TGCATAGATGAGTTTGCTTGTGTGAGCATGTTTCTT CCAGTGTTCGCAAAGATTATTATGAAGTTTATGTCTCAAGTTCTTTCTGGTGTCAATTTTCGTTCACTTCTTGTATGGACATTGAATTTTGATTGTTGTTTAGTCGGTCATCTTATTCTTAGGTACAGTAATTCTTGTAACCAGGAGCGGCTTATATTACCTGAGTATTCTGACACGTCTTCCTGCAATACGCTGTAACAATGCATGAGTGAAAAAAAAAAGAGAAAAATAAGAGCAACTTCTTTTGT]
[+] EMBL CA754942 [ TGTGCCAAGCGGCCGCGCATCGCAGCCGAGACGAGCCGCCCCCCGCACCGCACTCTCCGCCGCCGGCGCCGCGCCGACCTCCTCCGCCGCGCCGCCTCCCCGGCGCGCGCCCCCGTCACCCTCTCTCGCCTCGCCGCCGCCGCCGCTGCCTCCTCGTGAGGGGGGACGGTGGTGGGGGCCTCTGCCCTATGGCGAGCGGCGACGGCGGCGACGACACGGGCGTGAAGCGCGTGGCGGACCGCTACCTGAAGCGCGAGGTCCTGGGAGAGGGAACCTACAGAGTCGTCTTCAAGGCCGTCGACACCGAGACTGGGAATACAGGCGCAGTAAAGAAAATCCGGATAGGGAAGTACAAGGAAGGTGCCAATTTCGCTGCATTGAGGGAAATTAAACTTCTCAAGGAGCTGAAAGATTCTGATATTATCGAGTTGATTGATGTCTTCCCTTACGAGGGACACTTACATCTCGGATTTGAGTTCATGGACGA TGATTGGGAAG TGTCATACGAGATAGGAACATTGTATTATCTCCAGCTGACAC AAATCTTATATTCAGATGA GGCAAAAGGGTTAGCACTC GGCAGAAGAAGGGGATGCTct ]
[+] EMBL AK062401 [ TTACATATGATCCAAAAGCAAGAATTACAGCTCAGCAGGCTCTAGAACACCGGTACTTTTTATCAGTACCAGCGCCAACAAAACCATCACAGCTTCCAAGGCCACCACCTAAGGGTGATTCAGGGAATAACAAGATACCAGACTTGAACCTGCAGGACGGCCCTGTTGTTCTGTCCCCGCCAAGAAAGTTGCGCAGGGTGACTGCCCATGAAGGGATGGAAGTCCATATGCATCGGGCGGATAGAACAGAAGAGCATCCTTCAGGGGCAAGGCACATGGATGACATGTCCAGCCAGAGTTCTAGAATACCAATGTCAGTTGATGTTGGAGCTATTTTTGGGACACGACCTGCTCCTAGACCAACGTTAAACAGTGCCGACAAGTCTCGTTTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTA AATCACCATTTTTTCCATACTGGCTTGTTGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATCTACCAACAAAAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATGGCACAGCCAACTATGCTGTTATCGTTTTTGACTACCAAAGCCGGCT CAGGAAGAGGAAACTGAAGAGTTACGT GTTACGATGCTAAT TTACA CCAGGACGTGCACAT GCCAT TT C AT TTTGGCT GGCATACATAAATCTGT AATCTTT AT TGCATAGATGAGTTTGCTTGTGTGAGCATGTTTCTT CCAGTGTTCGCAAAGATTATTATGAAGTTTATGTCTCAAGTTCTTTCTGGTGTCAATTTTCGTTCACTTCTTGTATGGACATTGAATTTTGATTGTTGTTTAGTCGGTCATCTTATTCTTAGGTACAGTAATTCTTGTAACCAGGAGCGGCTTATATTACCTGAGTATTCTGACACGTCTTCCTGCAATACGCTGTAACAA ]
[-] EMBL CB679198 [ AACCATCACAGCTTCCAAGGCCACCACCTAAGGGTGATTCAGGGAATAACAAGATACCAGACTTGAACCTGCAGGACGGCCCTGTTGTTCTGTCCCCGCCAAGAAAGTTGCGCAGGGTGACTGCCCATGAAGGGATGGAAGTCCATATGCATCGGGCGGATAGAACAGAAGAGCATCCTTCAGGGGCAAGGCACATGGATGACATGTCCAGCCAGAGTTCTAGAATACCAATGTCAGTTGATGTTGGAGCTATTTTTGGGACACGACCTGCTCCTAGACCAACGTTAAACAGTGCCGACAAGTCTCGTTTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTA AATCACCATTTTTTCCATACTGGCTTGTTGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATCTACCAACAAAAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATGGCACAGCCAACTATGCTGTTATCGTTTTTGACTACCAAAGCCGGCT CAGGAAGAGGAAACTGAAGAGTTACGT GTTACGATGCTAAT TTACA CCAGGACGTGCACAT GCCAT TT C AT TTTGGCT GGCATACATAAATCTGT AATCTTT AT TGCATAGATGAGTTTGCTTGTGTGAGCATGTTTCTT CCAGTGTTCGCAAAGATTATTATGAAGTTTATGTCTCAAGTTCTTTCTGGTGTCAATTTTCGTTCACTTCTTGTATGGACATTGAATTTTGATTGTAGGGTAGTCGGTCATCTTATTCTTAGGTCCAaaaa ]
[+] EMBL BQ908145 [ GGATCCAGAATTTGGATACACAGAGTATAATCACCATTTTTTCCATACTGGCTTGTTGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATCTACC ACAAAAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATGGCACAGCCAACTATGCTGTTATCGTTTTTGACTACC AAGCCGGCTCCAGGAAGAGGAAACTGAAGAGTTACGTGGTTACGATGCTAATGTTACACCCAGGACGTGCACATGGCCATGTTGCAATGTTGGGCTGGGCATACATAAATCTGTGAATCTTTGATGTGCATAGATGAGTTTGCTTGTGTGAGCATGTTTCTTGCCAGTGTTCGCAAAGATTATTATGAAGTTTATGTCTCAAGTTCTTTCTGGTGTCAATTTTCGTTCACTTCTNGTATGGACATTGAATTTTGATTGTTGTTTAGTCGGTCATCTTATTCTTAGGTACAaaaaaaa ]
consensusID : consensus_13033#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2001 fasta sequence
[CAGCCGAGACGAGCCGCCCCCCGCACCGCACTCTCCGCCGCCGGCCGCGCCGACCTCCTCCGCCGCGCCGCCTCCCCGGCGCGCGCCCCCGTCACCCTCTCTCGCCTCGCCGCCGCCGCCGCTGCCTCCTCGTGAGGGGGGACGGTGGTGGGGGCCTCTG-CCTATGGCGAGCGGCGACGGCGGCGACGACGCGGGCGTGAAGCGCGTGGCGGACCGCTACCTGAAGCGCGAGGTCCTGGGAGAGGGAACCTACGGCGTCGTCTTCAAGGCCGTCGACACCAAGACTGGGAATACAGTCGCAATAAAGAAAATCCGGCTAGGGAAGTACAAGGAAGGTGTCAATTTCACTGCATTGAGGGAAATTAAACTTCTTAAGGAGCTGAAAGATTCTAATATTATAGAGCTGATTGATGCTTTCCCTTACAAGGGAAACTTACATCTTGTATTTGAGTTCATGGAGACTGATTTGGAAGCTGTCATACGAGATAGGAACATTGTATTATCTCCAGCTGATACAAAATCTTATATTCAGATGATGTTAAAAGGTTTAGCCTTCTGCCATAAGAAATGGGTGCTACACAGGGATATGAAACCAAATAATTTACTCATTGGCGCTGATGGGCAGCTTAAGCTTGCTGACTTTGGTCTGGCGCGCATATTTGGGAGTCCAGAGCGGAACTTCACTCATCAGGTCTTTGCACGATGGTACCGAGCACCAGAATTATTATTTGGCACCAAGCAGTATGGATCTGCAGTTGATATTTGGGCTGCTGGTTGTATTTTTGCTGAACTGCTGCTTAGGCGACCGTTTCTCCAGGGTTCTAGTGACATTGATCAACTTGGGAAGATCTTTGCTGCATTTGGAACTCCAAAGTCTTCTCAATGGCCGGACATGGTTTATCTTCCAGATTATGTTGAATACCAATTTGTCTCTGCACCTCCACTTCGCTCATTGTTTCCAATGGCCAGTGATGATGCATTGGATCTTCTATCAAGAATGTTTACATATGATCCAAAAGCAAGAATTACAGCTCAGCAGGCTCTAGAACACCGGTACTTTTTATCAGTACCAGCGCCAACAAAACCATCACAGCTTCCAAGGCCACCACCTAAGGGTGATTCAGGGAATAACAAGATACCAGACTTGAACCTGCAGGACGGCCCTGTTGTTCTGTCCCCGCCAAGAAAGTTGCGCAGGGTGACTGCCCATGAAGGGATGGAAGTCCATATGCATCGGGCGGATAGAACAGAAGAGCATCCTTCAGGGGCAAGGCACATGGATGACATGTCCAGCCAGAGTTCTAGAATACCAATGTCAGTTGATGTTGGAGCTATTTTTGGGACACGACCTGCTCCTAGACCAACGTTAAACAGTGCCGACAAGTCTCGTTTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTAAATCACCATTTTTTCCATACTGGCTTGTTGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATCTACCAACAAAAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATGGCACAGCCAACTATGCTGTTATCGTTTTTGACTACCAAAGCCGGCTCAGGAAGAGGAAACTGAAGAGTTACGTGTTACGATGCTAATTTACACCAGGACGTGCACATGCCATTTCATTTTGGCTGGCATACATAAATCTGTAATCTTTATTGCATAGATGAGTTTGCTTGTGTGAGCATGTTTCTTCCAGTGTTCGCAAAGATTATTATGAAGTTTATGTCTCAAAAACTTTCTGGTGTCAATTTTCGTTCACTTCTTGTATGGACATTGAATTTTGATTGTTGTTTAGTCGGTAAAAATATTCTTAGGTACAGTAATTCTTGTAACCAGGAGCGGCTTATATTACCTGAGTATTCTGACACGTCTTCCTGCAATACGCTGTAACAATGCATGAGTGAAAAAAAAAAAAAAAAAAACGCGAGACTAGTTCTCT]
[+] EMBL OSCDC28 [CAGCCGAGACGAGCCGCCCCCCGCACCGCACTCTCCGCCGCCGGCCGCGCCGACCTCCTCCGCCGCGCCGCCTCCCCGGCGCGCGCCCCCGTCACCCTCTCTCGCCTCGCCGCCGCCGCCGCTGCCTCCTCGTGAGGGGGGACGGTGGTGGGGGCCTCTG CCTATGGCGAGCGGCGACGGCGGCGACGACGCGGGCGTGAAGCGCGTGGCGGACCGCTACCTGAAGCGCGAGGTCCTGGGAGAGGGAACCTACGGCGTCGTCTTCAAGGCCGTCGACACCAAGACTGGGAATACAGTCGCAATAAAGAAAATCCGGCTAGGGAAGTACAAGGAAGGTGTCAATTTCACTGCATTGAGGGAAATTAAACTTCTTAAGGAGCTGAAAGATTCTAATATTATAGAGCTGATTGATGCTTTCCCTTACAAGGGAAACTTACATCTTGTATTTGAGTTCATGGAGACTGATTTGGAAGCTGTCATACGAGATAGGAACATTGTATTATCTCCAGCTGATACAAAATCTTATATTCAGATGATGTTAAAAGGTTTAGCCTTCTGCCATAAGAAATGGGTGCTACACAGGGATATGAAACCAAATAATTTACTCATTGGCGCTGATGGGCAGCTTAAGCTTGCTGACTTTGGTCTGGCGCGCATATTTGGGAGTCCAGAGCGGAACTTCACTCATCAGGTCTTTGCACGATGGTACCGAGCACCAGAATTATTATTTGGCACCAAGCAGTATGGATCTGCAGTTGATATTTGGGCTGCTGGTTGTATTTTTGCTGAACTGCTGCTTAGGCGACCGTTTCTCCAGGGTTCTAGTGACATTGATCAACTTGGGAAGATCTTTGCTGCATTTGGAACTCCAAAGTCTTCTCAATGGCCGGACATGGTTTATCTTCCAGATTATGTTGAATACCAATTTGTCTCTGCACCTCCACTTCGCTCATTGTTTCCAATGGCCAGTGATGATGCATTGGATCTTCTATCAAGAATGTTTACATATGATCCAAAAGCAAGAATTACAGCTCAGCAGGCTCTAGAACACCGGTACTTTTTATCAGTACCAGCGCCAACAAAACCATCACAGCTTCCAAGGCCACCACCTAAGGGTGATTCAGGGAATAACAAGATACCAGACTTGAACCTGCAGGACGGCCCTGTTGTTCTGTCCCCGCCAAGAAAGTTGCGCAGGGTGACTGCCCATGAAGGGATGGAAGTCCATATGCATCGGGCGGATAGAACAGAAGAGCATCCTTCAGGGGCAAGGCACATGGATGACATGTCCAGCCAGAGTTCTAGAATACCAATGTCAGTTGATGTTGGAGCTATTTTTGGGACACGACCTGCTCCTAGACCAACGTTAAACAGTGCCGACAAGTCTCGTTTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTAAATCACCATTTTTTCCATACTGGCTTGTTGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATCTACCAACAAAAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATGGCACAGCCAACTATGCTGTTATCGTTTTTGACTACCAAAGCCGGCTCAGGAAGAGGAAACTGAAGAGTTACGTGTTACGATGCTAATTTACACCAGGACGTGCACATGCCATTTCATTTTGGCTGGCATACATAAATCTGTAATCTTTATTGCATAGATGAGTTTGCTTGTGTGAGC ]
[+] EMBL CB625274 [ GCCCCTGTCACCCTCTCTCGCCTCGCCGCCGCCGCCGCTGCC TGAGGGGGGACGGTGGTGAGGGCCTCTGCCCTATGGCGAGCGGCGACGGCGGCGACGACGCGGGCGTGAAGCGCGTGGCGGACCGCTACCTGAAGCGCGAGGTCCTGGGAGAGGGAACCTACGGCGTCGTCTTCGAGGCCGTCCACACCAAGACTGGGAATACAGTCGCAATAAAGAAAATCCGGCTAGGGAAGTACAAGGAAGGTGTCAATTTCACTGCATTGAGGGAAATTAAACTTCTTAAGGAGCTGAAAGATTCTAATATTATAGAGCTGATTGATGCTTTCCCTTACAAGGGAAACTTACATCTTGTATTTGAGTTCATGGAGACTGATTTGGAAGCTGTCATACGAGATAGGAACATTGTATTATCTCCAGCTGATACAAAATCTTATATTCAGATGATGTTAAAAGGTTTAGCCTTCTGCCATAAGAAATGGGTGCTACACAGGGATATGAAACCAAATAATTTACTCATTGGCGCTGATGGGCAGCTTAAGCTTGCTGACTTTGGTCTGGCGCGCATATTTGGGAGTCCAGAGCGGAACTTCACTCATCACGTCTTTGCACGATGGTACCGAGCACCAGAATTATTATTTGGCACCAAGCAGTATGGATCTGCAGTTGATATTTGGGCTGCTGGTTGTATTTTTGCTGAACTGCTGCTTACGCGACCGTTTCTCCAGGGTTCTAGTGACATTGATCAACTTGGGAAGATCTTTGCT ]
[+] EMBL C22361 [ GTGCTACACAGGGATATGAAACCAAATAATTTACTCATTGGCGCTGATGGGCAGCTTAAGCTTGCTGACTTTGGTCTGGCGCGCATATTTGGGAGTCCAGAGCGGAACTTCACTCATCAGGTCTTTGCACGATGGTACCGAGCACCAGAATTATTATTTGGCACCAAGCAGTATGGATCTGCAGTTGATATTTGGGCTGCTGGTTGTATTTTTGCTGAACTGCTGCTTAGGCGACCGTTTCTCCAGGGTTCTAGTGACATTGATCAACTTGGGAAGATCTTTGCTGCATTTGGAACTCCAAAGTCTTCTCAATGGCCGGACATGGTTTATCTTCCAGATTATGTTGAATACCAATTTGTCTCTGCACCTCCACTTCGCTCATTGTTTCCAATGGCCAGTGATGATGCATTGGATCTTCTATCAAGAATGTTTACATATGAT ]
[+] EMBL CB679197 [ AATAATTTACTCATTGGCGCTGATGGGCAGCTTAAGCTTGCTGACTTTGGTCTGGCGCGCATATTTGGGAGTCCAGAGCGGAACTTCACTCATCAGGTCTTTGCACGATGGTACCGAGCACCAGAATTATTATTTGGCACCAAGCAGTATGGATCTGCAGTTGATATTTGGGCTGCTGGTTGTATTTTTGCTGAACTGCTGCTTAGGCGACCGTTTCTCCAGGGTTCTAGTGACATTGATCAACTTGGGAAGATCTTTGCTGCATTTGGAACTCCAAAGTCTTCTCAATGGCCGGACATGGTTTATCTTCCAGATTATGTTGAATACCAATTTGTCTCTGCACCTCCACTTCGCTCATTGTTTCCAATGGCCAGTGATGATGCATTGGATCTTCTATCAAGAATGTTTACATATGATCCAAAAGCAAGAATTACAGCTCAGCAGGCTCTAGAACACCGGTACTTTTTATCAGTACCAGCGCCAACAAAACCATCACAGCTTCCAAGGCCACCACCTAAGGGTGATTCAGGGAATAACAAGATACCAGACTTGAACCTGCAGGACGGCCCTGTTGTTCTGTCCCCGCCAAGAAAGTTGCGCAGGGTGACTGCCCATGAAGGGATGGAAGTCCATATGCATCGGGCGGATAGAACAGAAGAGCATCCTTCATGGGCAAGGCACATGGATGACATGTCCAGCCAGAGTTCTAGAATACCAATGTCAGTTGATGTTGGAGCTATTTTTGGGACACGACCTGCTCCTAGACCAACGTTAAACAGTGCCGACAAGTCTCGTTTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTAAATCACCATT ]
[-] EMBL CB625275 [ AGAAAGTTGCGCAGGGTGACTGCCCATGAAGGGATGGAAGTCCATATGCATCGGGCGGATAGAACAGAAGAGCATCCTTCAGGGGCAAGGCACATGGATGACATGTCCAGCCAGAGTTCTAGAATCCCAATGTCAGTGGATGTTGGAGCTATTTTTGGGACACGACGTGCTCATAGACCAACGTTAAACAGTGCTGACAAGTCTGGTGTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTAAATCTCCATTTTTTCCATAATGGCTTGTGGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATATACCAAC ]
[+] EMBL C22362 [ CTCCTAGACCAACGTTAAACAGTGCCGACAAGTCTCGTTTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTAAATCACCATTTTTTCCATACTGGCTTGTTGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATCTACCAACAAAAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATGGCACAGCCAACTATGCTGTTATCGTTTTTGACTACCAAAGCCGGCTCAGGAAGAGGAAACTGAAGAGTTACGTGTTACGATGCTAATTTACACCAGGACGTGCACATGCCATTTCATTTTGGCTGGCATACATAAATCTGTAATCTTTATTGCATAGATGAGTTTGCTTGTGTGAGCATGTTTCTTCCAGTGTTCGCAAAGATTATTATGAAGTTTATGTCTCAAAAA ]
[-] EMBL CF325723 [ AAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATGGCACAGCCAACTATGCTGTTATCGTTTTTGACTACCAAAGCCGGCTCAGGAAGAGGAAACTGAAGAGTTACGTGTTACGATGCTAATTTACACCAGGACGTGCACATGCCATTTCATTTTGGCTGGCATACATAAATCTGTAATCTTTATTGCATAGATGAGTTTGCTTGTGTGAGCATGTTTCTTCCAGTGTTCGCAAAGATTATTATGAAGTTTATGTCTCAAGTTCTTTCTGGTGTCAATTTTCGTTCACTTCTTGTATGGACATTGAATTTTGATTGTTGTTTAGTCGGTAAAAATATTCTTAGGTACAGTAATTCTTGTAACCAGGAGCGGCTTATATTACCTGAGTATTCTGACACGTCTTCCTGCAATACGCTGTAACAATGCATGAGTGAAAAAAAAAAAAAAAAAAACGCGAGACTAGTTCTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13033#0 AAAAAAAGCGCACACAAGGACCTCCCCTGTGCCAAGCGGCCGCGCATCGCAGCCGAGACG 60
consensus_13033#1 -------------------------------------------------CAGCCGAGACG 11
***********
consensus_13033#0 AGCCGCCCCCCGCACCGCACTCTCCGCCGCCGGCGCCGCGCCGACCTCCTCCGCCGCGCC 120
consensus_13033#1 AGCCGCCCCCCGCACCGCACTCTCCGCCGCCGG--CCGCGCCGACCTCCTCCGCCGCGCC 69
********************************* *************************
consensus_13033#0 GCCTCCCCGGCGCGCGCCCCCGTCACCCTCTCTCGCCTCGCCGCCGCCGCCGCTGCCTCC 180
consensus_13033#1 GCCTCCCCGGCGCGCGCCCCCGTCACCCTCTCTCGCCTCGCCGCCGCCGCCGCTGCCTCC 129
************************************************************
consensus_13033#0 TCGTGAGGGGGGACGGTGGTGGGGGCCTCTGCCCTATGGCGAGCGGCGACGGCGGCGACG 240
consensus_13033#1 TCGTGAGGGGGGACGGTGGTGGGGGCCTCTGCC-TATGGCGAGCGGCGACGGCGGCGACG 188
********************************* **************************
consensus_13033#0 ACGCGGGCGTGAAGCGCGTGGCGGACCGCTACCTGAAGCGCGAGGTCCTGGGAGAGGGAA 300
consensus_13033#1 ACGCGGGCGTGAAGCGCGTGGCGGACCGCTACCTGAAGCGCGAGGTCCTGGGAGAGGGAA 248
************************************************************
consensus_13033#0 CCTACGGCGTCGTCTTCAAGGCCGTCGACACCAAGACTGGGAATACAGTCGCAATAAAGA 360
consensus_13033#1 CCTACGGCGTCGTCTTCAAGGCCGTCGACACCAAGACTGGGAATACAGTCGCAATAAAGA 308
************************************************************
consensus_13033#0 AAATCCGGCTAGGGAAGTACAAGGAAGGTGTCAATTTCACTGCATTGAGGGAAATTAAAC 420
consensus_13033#1 AAATCCGGCTAGGGAAGTACAAGGAAGGTGTCAATTTCACTGCATTGAGGGAAATTAAAC 368
************************************************************
consensus_13033#0 TTCTTAAGGAGCTGAAAGATTCTAATATTATAGAGCTGATTGATGCTTTCCCTTACAAGG 480
consensus_13033#1 TTCTTAAGGAGCTGAAAGATTCTAATATTATAGAGCTGATTGATGCTTTCCCTTACAAGG 428
************************************************************
consensus_13033#0 GAAACTTACATCTTGTATTTGAGTTCATGGAGACTGATTTGGAAGCTGTCATACGAGATA 540
consensus_13033#1 GAAACTTACATCTTGTATTTGAGTTCATGGAGACTGATTTGGAAGCTGTCATACGAGATA 488
************************************************************
consensus_13033#0 GGAACATTGTATTATCTCCAGCTGATACAAAATCTTATATTCAGATGATGTTAAAAGGTT 600
consensus_13033#1 GGAACATTGTATTATCTCCAGCTGATACAAAATCTTATATTCAGATGATGTTAAAAGGTT 548
************************************************************
consensus_13033#0 TAGCCTTCTGCCATAAGAAATGGGTGCTACACAG-------------------------- 634
consensus_13033#1 TAGCCTTCTGCCATAAGAAATGGGTGCTACACAGGGATATGAAACCAAATAATTTACTCA 608
**********************************
consensus_13033#0 -----------------CTTAAGCTTGCTGACTTTGGTCTGGCGCGCATATTTGGGAGTC 677
consensus_13033#1 TTGGCGCTGATGGGCAGCTTAAGCTTGCTGACTTTGGTCTGGCGCGCATATTTGGGAGTC 668
*******************************************
consensus_13033#0 CAGAGCGGAACTTCACTCATCAGGTCTTTGCACGATGGTACCGAGCACCAGAATTATTAT 737
consensus_13033#1 CAGAGCGGAACTTCACTCATCAGGTCTTTGCACGATGGTACCGAGCACCAGAATTATTAT 728
************************************************************
consensus_13033#0 TTGGCACCAAGCAGTATGGATCTGCAGTTGATATTTGGGCTGCTGGTTGTATTTTTGCTG 797
consensus_13033#1 TTGGCACCAAGCAGTATGGATCTGCAGTTGATATTTGGGCTGCTGGTTGTATTTTTGCTG 788
************************************************************
consensus_13033#0 AACTGCTGCTTAGGCGACCGTTTCTCCAGGGTTCTAGTGACATTGATCAACTTGGGAAGA 857
consensus_13033#1 AACTGCTGCTTAGGCGACCGTTTCTCCAGGGTTCTAGTGACATTGATCAACTTGGGAAGA 848
************************************************************
consensus_13033#0 TCTTTGCTGCATTTGGAACTCCAAAGTCTTCTCAATGGCCGGACATGGTTTATCTTCCAG 917
consensus_13033#1 TCTTTGCTGCATTTGGAACTCCAAAGTCTTCTCAATGGCCGGACATGGTTTATCTTCCAG 908
************************************************************
consensus_13033#0 ATTATGTTGAATACCAATTTGTCTCTGCACCTCCACTTCGCTCATTGTTTCCAATGGCCA 977
consensus_13033#1 ATTATGTTGAATACCAATTTGTCTCTGCACCTCCACTTCGCTCATTGTTTCCAATGGCCA 968
************************************************************
consensus_13033#0 GTGATGATGCATTGGATCTTCTATCAAGAATGTTTACATATGATCCAAAAGCAAGAATTA 1037
consensus_13033#1 GTGATGATGCATTGGATCTTCTATCAAGAATGTTTACATATGATCCAAAAGCAAGAATTA 1028
************************************************************
consensus_13033#0 CAGCTCAGCAGGCTCTAGAACACCGGTACTTTTTATCAGTACCAGCGCCAACAAAACCAT 1097
consensus_13033#1 CAGCTCAGCAGGCTCTAGAACACCGGTACTTTTTATCAGTACCAGCGCCAACAAAACCAT 1088
************************************************************
consensus_13033#0 CACAGCTTCCAAGGCCACCACCTAAGGGTGATTCAGGGAATAACAAGATACCAGACTTGA 1157
consensus_13033#1 CACAGCTTCCAAGGCCACCACCTAAGGGTGATTCAGGGAATAACAAGATACCAGACTTGA 1148
************************************************************
consensus_13033#0 ACCTGCAGGACGGCCCTGTTGTTCTGTCCCCGCCAAGAAAGTTGCGCAGGGTGACTGCCC 1217
consensus_13033#1 ACCTGCAGGACGGCCCTGTTGTTCTGTCCCCGCCAAGAAAGTTGCGCAGGGTGACTGCCC 1208
************************************************************
consensus_13033#0 ATGAAGGGATGGAAGTCCATATGCATCGGGCGGATAGAACAGAAGAGCATCCTTCAGGGG 1277
consensus_13033#1 ATGAAGGGATGGAAGTCCATATGCATCGGGCGGATAGAACAGAAGAGCATCCTTCAGGGG 1268
************************************************************
consensus_13033#0 CAAGGCACATGGATGACATGTCCAGCCAGAGTTCTAGAATACCAATGTCAGTTGATGTTG 1337
consensus_13033#1 CAAGGCACATGGATGACATGTCCAGCCAGAGTTCTAGAATACCAATGTCAGTTGATGTTG 1328
************************************************************
consensus_13033#0 GAGCTATTTTTGGGACACGACCTGCTCCTAGACCAACGTTAAACAGTGCCGACAAGTCTC 1397
consensus_13033#1 GAGCTATTTTTGGGACACGACCTGCTCCTAGACCAACGTTAAACAGTGCCGACAAGTCTC 1388
************************************************************
consensus_13033#0 GTTTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTAAATCACCATTT 1457
consensus_13033#1 GTTTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTAAATCACCATTT 1448
************************************************************
consensus_13033#0 TTTCCATACTGGCTTGTTGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATCTAC 1517
consensus_13033#1 TTTCCATACTGGCTTGTTGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATCTAC 1508
************************************************************
consensus_13033#0 CAACAAAAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATG 1577
consensus_13033#1 CAACAAAAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATG 1568
************************************************************
consensus_13033#0 GCACAGCCAACTATGCTGTTATCGTTTTTGACTACCAAAGCCGGCTCAGGAAGAGGAAAC 1637
consensus_13033#1 GCACAGCCAACTATGCTGTTATCGTTTTTGACTACCAAAGCCGGCTCAGGAAGAGGAAAC 1628
************************************************************
consensus_13033#0 TGAAGAGTTACGTGTTACGATGCTAATTTACACCAGGACGTGCACATGCCATTTCATTTT 1697
consensus_13033#1 TGAAGAGTTACGTGTTACGATGCTAATTTACACCAGGACGTGCACATGCCATTTCATTTT 1688
************************************************************
consensus_13033#0 GGCTGGCATACATAAATCTGTAATCTTTATTGCATAGATGAGTTTGCTTGTGTGAGCATG 1757
consensus_13033#1 GGCTGGCATACATAAATCTGTAATCTTTATTGCATAGATGAGTTTGCTTGTGTGAGCATG 1748
************************************************************
consensus_13033#0 TTTCTTCCAGTGTTCGCAAAGATTATTATGAAGTTTATGTCTCAAGTTCTTTCTGGTGTC 1817
consensus_13033#1 TTTCTTCCAGTGTTCGCAAAGATTATTATGAAGTTTATGTCTCAAAAACTTTCTGGTGTC 1808
********************************************* ************
consensus_13033#0 AATTTTCGTTCACTTCTTGTATGGACATTGAATTTTGATTGTTGTTTAGTCGGTCATCTT 1877
consensus_13033#1 AATTTTCGTTCACTTCTTGTATGGACATTGAATTTTGATTGTTGTTTAGTCGGTAAAAAT 1868
****************************************************** * *
consensus_13033#0 ATTCTTAGGTACAGTAATTCTTGTAACCAGGAGCGGCTTATATTACCTGAGTATTCTGAC 1937
consensus_13033#1 ATTCTTAGGTACAGTAATTCTTGTAACCAGGAGCGGCTTATATTACCTGAGTATTCTGAC 1928
************************************************************
consensus_13033#0 ACGTCTTCCTGCAATACGCTGTAACAATGCATGAGTGAAAAAAAAAAGAGAAAAATAAGA 1997
consensus_13033#1 ACGTCTTCCTGCAATACGCTGTAACAATGCATGAGTGAAAAAAAAAAAAAAAAAA-ACGC 1987
*********************************************** * ***** * *
consensus_13033#0 GCAACTTCTTTTGT 2011
consensus_13033#1 GAGACTAGTTCTCT 2001
* *** ** * *
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||