cluster # 14129

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Oryza sativa
cluster # 14129 cluster # 14129 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14129#0 length = 962 sequences # 10
consensus_14129#1 length = 796 sequences # 1

consensus_14129#2 length = 764 sequences # 1
consensus_14129#3 length = 740 sequences # 2
consensus_14129#4 length = 296 sequences # 1

consensusID : consensus_14129#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 962
fasta sequence

                              [GTGCAAAAAAAAAAACCCTATCTGACGCAAGTCACGCAACCATTTCGACGTCTGCTCCTACAGAAAGGCAGAAACTTCCCAAATCACAAGAGGGGGAAAAAGAAGATAAAAAAGGAGAGAAAGAAGCCGTCAAAGGTAGTGGGGGCGGCGGCGCCTTGGAACTTG-TTTTTTTTTTCTCTTGTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCGTCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGGTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAA-GGGAAGATGCTGTTAAAGAGAAAATAATATT-GGCACA-GGAGAAAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTGCCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGTGGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATACCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTGACAGTATTATCCTTTTTTTTTCTGCACAATCTTGTACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTATCATAATGATTGAAGTTACTTTCCTGATTAACTACCAAATATATAGTGCAGATGTTTCATCTGAAAAAAAAAAAAA]

[+] EMBL AK120568             [GTGCAAAAAAAAAAACCCTATCTGACGCAAGTCACGCAACCATTTCGACGTCTGCTCCTACAGAAAGGCAGAAACTTCCCAAATCACAAGAGGGGGAAAAAGAAGATAAAAAAGGAGAGAAAGAAGCCGTCAAAGGTAGTGGGGGCGGCGGCGCCTTGGAACTTG  TTTTTTTTTCTCTTGTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCGTCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGGTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAA GGGAAGATGCTGTTAAAGAGAAAATAATATT GGCACA GGAGAAAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTGCCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGTGGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATACCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTGACAGTATTATCCTTTTTTTTTCTGCACAATCTTGTACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTATC                                                                          ]
[+] EMBL AU095397             [                                                                                         GAGGGGGAAAAAGAAGATAAAAAAGGAGAGAAAGAAGCCGTCAAAGGTAGTGGGGGCGGCGGCGCCTTGGAACTTG TTTTTTTTTTCTCTTGTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCGTCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGGTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAAGGGGAAGATGCTGTTAAAGAGAAAATAATATTGGGCACAGGGAGAAAAACATTCAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU166882             [                                                                                                                                         AGTGGGGGCGGCGGCGCCTTGGAACTTGTTTTTTTTTTTCTCTTGTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCGTCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGGTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAA GGGAAGATGCTGTTAAAGAGAAAATAATATT GGCACA GGAGAAAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTGCCGTCTCAGTAATAGTACTGCTCACAC                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF281322             [                                                                                                                                                  GGCGGCGCCTTGGAACTTG TTTTTTTTTTCTCTTGTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCGTCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGGTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAA GGGAAGATGCTGTTAAAGAGAAAATAATATT GGCACA GGAGAAAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTGCCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGTGGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATACCTTTAT                                                                                                                                                                                                                                              ]
[-] EMBL CF311510             [                                                                                                                                                                                                                                                                                        GTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAA GGGAAGATGCTGTTAAAGAGAAAATAATATT GGCACA GGAGAAAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTGCCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGTGGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATACCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTTTAGCATTATCATTGACAGTATTATCCTTTTTTTTTCTGCACAATCTTGTACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTATCATAATGATTGAAaaaaa                                                         ]
[-] EMBL CF281323             [                                                                                                                                                                                                                                                                                                ATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAA GGGAAGATGCTGTTAAAGAGAAAATAATATT GGCACA GGAGAAAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTGCCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGTGGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATACCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTGACAGAAAAATCCTTTTTTTTTCTGCACAATCTTGTACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTATCATAATGATTGAAGTTACTTTCCTGATTAACTACCAAATATATAGTGCAGATGTTTCATCTGAAA          ]
[+] EMBL CF322189             [                                                                                                                                                                                                                                                                                                                                                                                                                         GCTACGCGGCGAAGGCAACAAGTAATACTAA GGGAACATGCTGATAAAGAGAAAATAATATT GGCACA GGACATAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTGGCGTCTCAGTAATAGTACTGC                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI796801             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         atgTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCT CAGCTACTACATT CCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGTGGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATACCTTGATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTGACAGTATTATCCTTTTTTTTTCTGCAC ATCTTGTACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTATCATAATGATTGAAGTTACTTTCCTGATTAACTACC AATATATAGTGCAGATGTTTCATCTGAAAAA        ]
[+] EMBL AU086018             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCTACTACATTGCCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGTGGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATACCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTGACAGTATTATCCTTTTTTTTTCTGCACAATCTTGTACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTATCATAATGATTGAAGTTACTTTCCTGATTAACTACCAAATATATAGTGCAGATGTTTCA    AAAAAA       ]
[+] EMBL AU166883             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TACATTGCCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGTGGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGNACTTGTAATAGCATAATAGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATACCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTGACAGTATTATCCTTTTTTTTTNTGCACAATCTTGTACAGGATTGTACTATGNACCATTTTTTTCTTACTTATGTTGTATCATAATGATTGAAGTTACTTTCCTGATTAACTACCAAATATATAGTGCAGATGTTTCATNTGAAAAAAAAAAAAA]




>consensus_14129#0
GTGCAAAAAAAAAAACCCTATCTGACGCAAGTCACGCAACCATTTCGACGTCTGCTCCTA
CAGAAAGGCAGAAACTTCCCAAATCACAAGAGGGGGAAAAAGAAGATAAAAAAGGAGAGA
AAGAAGCCGTCAAAGGTAGTGGGGGCGGCGGCGCCTTGGAACTTGTTTTTTTTTTCTCTT
GTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCG
TCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGGTTTTCTGATTGCGGATTGGA
GTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCA
CAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGA
AGGCAACAAGTAATACTAAGGGAAGATGCTGTTAAAGAGAAAATAATATTGGCACAGGAG
AAAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTGC
CGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGTG
GAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGGT
TGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATACCT
TTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCG
TGCTTAGCTTTTTCTAGCATTATCATTGACAGTATTATCCTTTTTTTTTCTGCACAATCT
TGTACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTATCATAATGATTGAA
GTTACTTTCCTGATTAACTACCAAATATATAGTGCAGATGTTTCATCTGAAAAAAAAAAA
AA

consensusID : consensus_14129#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 796
fasta sequence

                              [TTTAGCTCATGGCTTTGTCACGGTGGTTTCTGTTGCAAATAGCTACATGCTTGTGTTATGTTACAAGCTTTGTCTATGGATATCTTTGATTCATGATAGATGGGAAAAACACAATGTTTGCTTTGTTATTGATAAGGATAACAATTGGCTGCTTGTGACTTAAGTTATAGATTATTAAACAGCACCTTATGTTATGTGATGTTTGAGCATTACTAGCTATGAGCCTATGACAACCTACTTTCTGAACATTTGTTCATTGTCTTTTTACAAGAGTTGAAAAGATGCACAGTCATAAGTTTGTGTGTAATCTACAGATAATATTGGCACAGGAGAAAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTGCCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGTGGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATACCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTGACAGTATTATCCTTTTTTTTTCTGCACAATCTTGTACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTATCATAATGATTGAAGTTACTTTCAAAGTAACTACCAAATATATAGTGCAGATGTTTCA]

[-] EMBL CB677746             [TTTAGCTCATGGCTTTGTCACGGTGGTTTCTGTTGCAAATAGCTACATGCTTGTGTTATGTTACAAGCTTTGTCTATGGATATCTTTGATTCATGATAGATGGGAAAAACACAATGTTTGCTTTGTTATTGATAAGGATAACAATTGGCTGCTTGTGACTTAAGTTATAGATTATTAAACAGCACCTTATGTTATGTGATGTTTGAGCATTACTAGCTATGAGCCTATGACAACCTACTTTCTGAACATTTGTTCATTGTCTTTTTACAAGAGTTGAAAAGATGCACAGTCATAAGTTTGTGTGTAATCTACAGATAATATTGGCACAGGAGAAAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTGCCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGTGGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATACCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTGACAGTATTATCCTTTTTTTTTCTGCACAATCTTGTACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTATCATAATGATTGAAGTTACTTTCAAAGTAACTACCAAATATATAGTGCAGATGTTTCA]




>consensus_14129#1
TTTAGCTCATGGCTTTGTCACGGTGGTTTCTGTTGCAAATAGCTACATGCTTGTGTTATG
TTACAAGCTTTGTCTATGGATATCTTTGATTCATGATAGATGGGAAAAACACAATGTTTG
CTTTGTTATTGATAAGGATAACAATTGGCTGCTTGTGACTTAAGTTATAGATTATTAAAC
AGCACCTTATGTTATGTGATGTTTGAGCATTACTAGCTATGAGCCTATGACAACCTACTT
TCTGAACATTTGTTCATTGTCTTTTTACAAGAGTTGAAAAGATGCACAGTCATAAGTTTG
TGTGTAATCTACAGATAATATTGGCACAGGAGAAAAACATTCAACAGCTAAATGGGCTTA
TTCAAAGCCTTCAGCTGCAGCTACTACATTGCCGTCTCAGTAATAGTACTGCTCACACCA
CCTCAAATAAGTCGACGAACAACAGTGCAGTGGAGGGACATAAAATGATTGATGATTAAC
CTCTCAGCTGTACTTGTAATAGCATAATAGGTTGCTAACTTGATGGTATACAGCCAGCTC
AAGAGCAGGCATCTTTGAGGCAATGAATACCTTTATCGTCATCATCCAGTAGGACGGAAG
TAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTG
ACAGTATTATCCTTTTTTTTTCTGCACAATCTTGTACAGGATTGTACTATGTACCATTTT
TTTCTTACTTATGTTGTATCATAATGATTGAAGTTACTTTCAAAGTAACTACCAAATATA
TAGTGCAGATGTTTCA

consensusID : consensus_14129#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 764
fasta sequence

                              [TGTCTTTTTTTTCTCTTGTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCGTCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGGTACGGCTTCCTTCCCTGTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAAGGGAAGATGCTGTTAAAGAGAAAGTGAGCACTCGCCTTTCTTGTTAAACTATCTCCACTTGTGGTTTATTTTGGGCTTCCAATATTGTAGTTCATTTGAAATAAGGTGCCTTTTCTGGTCAGACGCATATGTTGCATTACTGTGTCTGTGTTGTGTTCATGTTATGAGAAAACCGGTTTTGTCATATGGCGGTCGAACAGAACTTGGAACACACATATTGACAGCACCAATAAAAGCCTACCTTATGCAAACTGATAAAGACTTTGACGAGCCGTATTTCATTTCCCCTGATACCCTGGTGGTCAACTTAACCATCTGAATTTTTCTGAGACAACTGTAACATTGCTCAACTGTATGTTAATTTTTGAGTTGCTTACTTCATGAAAATTGTAACTGACTAAAGCCTTCACCAACTCTGAAGACCAATAGCTTGGTGAGTTGTTGGGGATGGGAGTTAAGTGCCTAGTCTTG]

[+] EMBL CB677745             [TGTCTTTTTTTTCTCTTGTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCGTCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGGTACGGCTTCCTTCCCTGTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAAGGGAAGATGCTGTTAAAGAGAAAGTGAGCACTCGCCTTTCTTGTTAAACTATCTCCACTTGTGGTTTATTTTGGGCTTCCAATATTGTAGTTCATTTGAAATAAGGTGCCTTTTCTGGTCAGACGCATATGTTGCATTACTGTGTCTGTGTTGTGTTCATGTTATGAGAAAACCGGTTTTGTCATATGGCGGTCGAACAGAACTTGGAACACACATATTGACAGCACCAATAAAAGCCTACCTTATGCAAACTGATAAAGACTTTGACGAGCCGTATTTCATTTCCCCTGATACCCTGGTGGTCAACTTAACCATCTGAATTTTTCTGAGACAACTGTAACATTGCTCAACTGTATGTTAATTTTTGAGTTGCTTACTTCATGAAAATTGTAACTGACTAAAGCCTTCACCAACTCTGAAGACCAATAGCTTGGTGAGTTGTTGGGGATGGGAGTTAAGTGCCTAGTCTTG]




>consensus_14129#2
TGTCTTTTTTTTCTCTTGTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTG
TTCCCCCAGATTCAGCGTCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGGTAC
GGCTTCCTTCCCTGTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCT
CATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGG
TGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAAGGGAAGA
TGCTGTTAAAGAGAAAGTGAGCACTCGCCTTTCTTGTTAAACTATCTCCACTTGTGGTTT
ATTTTGGGCTTCCAATATTGTAGTTCATTTGAAATAAGGTGCCTTTTCTGGTCAGACGCA
TATGTTGCATTACTGTGTCTGTGTTGTGTTCATGTTATGAGAAAACCGGTTTTGTCATAT
GGCGGTCGAACAGAACTTGGAACACACATATTGACAGCACCAATAAAAGCCTACCTTATG
CAAACTGATAAAGACTTTGACGAGCCGTATTTCATTTCCCCTGATACCCTGGTGGTCAAC
TTAACCATCTGAATTTTTCTGAGACAACTGTAACATTGCTCAACTGTATGTTAATTTTTG
AGTTGCTTACTTCATGAAAATTGTAACTGACTAAAGCCTTCACCAACTCTGAAGACCAAT
AGCTTGGTGAGTTGTTGGGGATGGGAGTTAAGTGCCTAGTCTTG

consensusID : consensus_14129#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 740
fasta sequence

                              [CGGCGGCGCCTTGGAACTTGTTTTTTTTTTCTCTTGTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCGTCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGAACGGGAGGTTGCTCCTTAGAAGGTTAGATTGTATGAAGAACTTGATGACTCTATGATCGATCATCTTCTCCAGATCCCCCTCCATTCGTACGATTCAGTGCAAATTTCTAAGGGTTTTTTGAAGGCCTTTTGCAATTCTTCAAGTCCTAAGTTTCAACTCTTCTACCTTTTCCTTTTTCTTTGGTGCCCTGAAGAGGCCAAGTTTATTCTTCTTGAATTTGTAGATGCCGTGGAAATTCTAATCAGCTAACAATGGTATCTCTTTCCTTAGGTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAAGGGAAGATGCTGTTAAAGAGAAAATAATATTGGCACAGGAGGAAAAACATTCAACAGCTTAAATGGGCTTTATTCAAAGCCTTCAGCTTGCAGCTTACTTACATTNNCCGTCTCAGTAATAGTACTGCTCCACACCACCTCAAATAAGTCGACGGGACCACAGTGCAGTGGGGG]

[+] EMBL CF311511             [CGGCGGCGCCTTGGAACTTGTTTTTTTTTTCTCTTGTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCGTCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGAACGGGAGGTTGCTCCTTAGAAGGTTAGATTGTATGAAGAACTTGATGACTCTATGATCGATCATCTTCTCCAGATCCCCCTCCATTCGTACGATTCAGTGCAAATTTCTAAGGGTTTTTTGAAGGCCTTTTGCAATTCTTCAAGTCCTAAGTTTCAACTCTTCTACCTTTTCCTTTTTCTTTGGTGCCCTGAAGAGGCCAAGTTTATTCTTCTTGAATTTGTAGATGCCGTGGAAATTCTAATCAGCTAACAATGGTATCTCTTTCCTTAGGTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTT                                                                                                                                                                                                                                                        ]
[+] EMBL OSS11301A            [                                                                                                                                                                                                                                                                                                                                                                                                      agATCCCCCTCCATTCGTTTTCTGATTGCGGATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAAGGGAAGATGCTGTTAAAGAGAAAATAATATTGGCACAGGAGGAAAAACATTCAACAGCTTAAATGGGCTTTATTCAAAGCCTTCAGCTTGCAGCTTACTTACATTNNCCGTCTCAGTAATAGTACTGCTCCACACCACCTCAAATAAGTCGACGGGACCACAGTGCAGTGGGGG]




>consensus_14129#3
CGGCGGCGCCTTGGAACTTGTTTTTTTTTTCTCTTGTGGCGATCTGTGCGAAGAAATCGA
AGAACCCTACTACCTCTGTTCCCCCAGATTCAGCGTCGATTCCCCAAATTGGCTCCCGCG
GCCAGGCTGAGATGAACGGGAGGTTGCTCCTTAGAAGGTTAGATTGTATGAAGAACTTGA
TGACTCTATGATCGATCATCTTCTCCAGATCCCCCTCCATTCGTACGATTCAGTGCAAAT
TTCTAAGGGTTTTTTGAAGGCCTTTTGCAATTCTTCAAGTCCTAAGTTTCAACTCTTCTA
CCTTTTCCTTTTTCTTTGGTGCCCTGAAGAGGCCAAGTTTATTCTTCTTGAATTTGTAGA
TGCCGTGGAAATTCTAATCAGCTAACAATGGTATCTCTTTCCTTAGGTTTTCTGATTGCG
GATTGGAGTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTAT
CACATCACAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTAC
ACGGCGAAGGCAACAAGTAATACTAAGGGAAGATGCTGTTAAAGAGAAAATAATATTGGC
ACAGGAGGAAAAACATTCAACAGCTTAAATGGGCTTTATTCAAAGCCTTCAGCTTGCAGC
TTACTTACATTNNCCGTCTCAGTAATAGTACTGCTCCACACCACCTCAAATAAGTCGACG
GGACCACAGTGCAGTGGGGG

consensusID : consensus_14129#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 296
fasta sequence

                              [CTGTACTTGTAATAGCATAATNGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATNCCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTGACAGTATTATCCTTTTTTTTTCTGCACAATCTTGTACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTATCATAATGATTGAAGTTACTTTCAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU031538             [CTGTACTTGTAATAGCATAATNGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCAATGAATNCCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTGACAGTATTATCCTTTTTTTTTCTGCACAATCTTGTACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTATCATAATGATTGAAGTTACTTTCAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14129#4
CTGTACTTGTAATAGCATAATNGGTTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCA
GGCATCTTTGAGGCAATGAATNCCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCA
TATTGTTTTATGTATTGAAGCTGCGTGCTTAGCTTTTTCTAGCATTATCATTGACAGTAT
TATCCTTTTTTTTTCTGCACAATCTTGTACAGGATTGTACTATGTACCATTTTTTTCTTA
CTTATGTTGTATCATAATGATTGAAGTTACTTTCAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14129#2      ------------------------------------------------------------
consensus_14129#3      ------------------------------------------------------------
consensus_14129#1      ------------------------------------------------------------
consensus_14129#4      ------------------------------------------------------------
consensus_14129#0      GTGCAAAAAAAAAAACCCTATCTGACGCAAGTCACGCAACCATTTCGACGTCTGCTCCTA 60
                                                                                   

consensus_14129#2      ------------------------------------------------------------
consensus_14129#3      ------------------------------------------------------------
consensus_14129#1      ------------------------------------------------------------
consensus_14129#4      ------------------------------------------------------------
consensus_14129#0      CAGAAAGGCAGAAACTTCCCAAATCACAAGAGGGGGAAAAAGAAGATAAAAAAGGAGAGA 120
                                                                                   

consensus_14129#2      -------------------------------------------TGTCTTTTTTTTCTCTT 17
consensus_14129#3      -------------------------CGGCGGCGCCTTGGAACTTGTTTTTTTTTTCTCTT 35
consensus_14129#1      ----------------------TTTAGCTCATGGCTTTGTCACGGTGGTTTCTGTTGCAA 38
consensus_14129#4      ------------------------------------------------------------
consensus_14129#0      AAGAAGCCGTCAAAGGTAGTGGGGGCGGCGGCGCCTTGGAACTTGTTTTTTTTTTCTCTT 180
                                                                                   

consensus_14129#2      GTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCG 77
consensus_14129#3      GTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCG 95
consensus_14129#1      ATAGCTACATGCTTGTGTTATGTTACAAGCTTTGT--CTATGGATATCTTTGATTCATGA 96
consensus_14129#4      ------------------------------------------------------------
consensus_14129#0      GTGGCGATCTGTGCGAAGAAATCGAAGAACCCTACTACCTCTGTTCCCCCAGATTCAGCG 240
                                                                                   

consensus_14129#2      TCGATTCCCCAAAT-TGGCTCCCGCGGCCAGGCTGAGATGGT--ACGGCTTCCTTCCCTG 134
consensus_14129#3      TCGATTCCCCAAAT-TGGCTCCCGCGGCCAGGCTGAGATGA---ACGGGAGGTTGCTCC- 150
consensus_14129#1      TAGATGGGAAAAACACAATGTTTGCTTTGTTATTGATAAGGATAACAATTGGCTGCTTGT 156
consensus_14129#4      ------------------------------------------------------------
consensus_14129#0      TCGATTCCCCAAATTGGCTCCCGCGGCCAGGCTGAGATGGTTTTCTGATTGCGGATTGGA 300
                                                                                   

consensus_14129#2      TTTTCTGATTGCGGATTGGAGTGATGAATTTGA-G--ACCAGTAGTTC--TCATCTTCCT 189
consensus_14129#3      --TTAGAAGGTTAGATTGTA-TGAAGAACTTGATG--ACTCTATGATCGATCATCTTCTC 205
consensus_14129#1      GACTTAAGTTATAGATTATTAAACAGCACCTTATGTTATGTGATGTTTGAGCATTACTAG 216
consensus_14129#4      ------------------------------------------------------------
consensus_14129#0      GTGATGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCA 360
                                                                                   

consensus_14129#2      CCTGCTTGTGCTCATTATCACATCACAGTTTGAATG-----GAAGCAGCAGGTTGGTGAG 244
consensus_14129#3      CAGATCCCCCTCCATTCGTACGATTCAGTGCAAATT-----TCTAAGGGTTTTTTGAAGG 260
consensus_14129#1      CTATGAGCCTATGACAACCTACTTTCTGAACATTTG-----TTCATTGTCTTTTTACAAG 271
consensus_14129#4      ------------------------------------------------------------
consensus_14129#0      CAGTTTGAATGGAAGCAGCAGGTTGGTGAGGCTGAGGCAAACCCAGCAGCTACACGGCGA 420
                                                                                   

consensus_14129#2      GCTGAGGCAAACCCAGCAGCTACACGGCGAAGGCAACAAGTAATACTAAGGGAAGATGCT 304
consensus_14129#3      CCTTTTGCAATTCTTCAAGTCCTAAGTTTCAACTCTTCTACCTTTTCCTTTTTCTTTGGT 320
consensus_14129#1      AGTTGAAAAGATGCACAGTCATAAGTTTGTGTGTAATCTACAGATAATATTGGCACAGGA 331
consensus_14129#4      ------------------------------------------------------------
consensus_14129#0      AGGCAACAAGTAATACTAAGGGAAGATGCTGT-TAAAGAGAAAATAATATTGGCACAGGA 479
                                                                                   

consensus_14129#2      GTTAAAGAGAAAGTGAGCACTCGCCTTTCTTGTTAAACTATCTCCACT-TGTGGTTTATT 363
consensus_14129#3      GCCCTGAAGAGGCCAAGT--TTATTCTTCTTG--AATTTGTAGATGCCGTGGAAATTCTA 376
consensus_14129#1      GAAAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTG 391
consensus_14129#4      ------------------------------------------------------------
consensus_14129#0      GAAAAACATTCAACAGCTAAATGGGCTTATTCAAAGCCTTCAGCTGCAGCTACTACATTG 539
                                                                                   

consensus_14129#2      TTGGGCTTCCAATATTGTAGTTCAT-----TTGAAATAAGGTGCCTTT--TCTGGTCAGA 416
consensus_14129#3      ATCAGCTAACAATGGTATCTCTTTC-----CTTAGGTTTTCTGATTGCGGATTGGAGTGA 431
consensus_14129#1      CCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGT 451
consensus_14129#4      ------------------------------------------------------------
consensus_14129#0      CCGTCTCAGTAATAGTACTGCTCACACCACCTCAAATAAGTCGACGAACAACAGTGCAGT 599
                                                                                   

consensus_14129#2      CGCATATGTTGC-ATTACTG--TGTCTGTGTTGTGTTCATG-TTATGAGAAAACCG-GTT 471
consensus_14129#3      TGAATTTGAGACCAGTAGTTCTCATCTTCCTCCTGCTTGTGCTCATTATCACATCACAGT 491
consensus_14129#1      GGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGG 511
consensus_14129#4      ------------------------------------CTGTACTTGTAATAGCATAATNGG 24
consensus_14129#0      GGAGGGACATAAAATGATTGATGATTAACCTCTCAGCTGTACTTGTAATAGCATAATAGG 659
                                                              *  *  * *    *       

consensus_14129#2      TTGTCATATGGCGGTCGAACAG--AACTTG-GAACACACATATTGACAGCACCAATAAAA 528
consensus_14129#3      TTGAATGGAAGCAGCAGGTTGGTGAGGCTG-AGGCAAACCCAGCAGCTACACGGCGAAGG 550
consensus_14129#1      TTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCA---ATGAAT 568
consensus_14129#4      TTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCA---ATGAAT 81
consensus_14129#0      TTGCTAACTTGATGGTATACAGCCAGCTCAAGAGCAGGCATCTTTGAGGCA---ATGAAT 716
                       ***       *  *       *  *         **  *          **      *  

consensus_14129#2      GCCTACCTTATGCAAACTGATAAAGACTTTGACGAGCCGTATTTCATTTCCCCTGATACC 588
consensus_14129#3      CAACAAGTAATACTAAGGGAAGATGCTGTTAAAGAGAAA-ATAATATTGGCACAGGA--- 606
consensus_14129#1      ACCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGA--- 625
consensus_14129#4      NCCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGA--- 138
consensus_14129#0      ACCTTTATCGTCATCATCCAGTAGGACGGAAGTAAGGCATATTGTTTTATGTATTGA--- 773
                              *  *    *   *  * *         **    **    **            

consensus_14129#2      CTGGTGGTCAACTTAACCATCTGAATTTTTCTGAGACAACTGTAACATTGCTCAACTGTA 648
consensus_14129#3      --GGAAAAACATTCAACAGCTTAAATGGGCTTTATTCAA-------AGCCTTCAGCTTGC 657
consensus_14129#1      --AGCTGCGTGCTTAGCTTTTTCTAGCATTATCAT-TGACAGTATTATCCTTTTTTTTTC 682
consensus_14129#4      --AGCTGCGTGCTTAGCTTTTTCTAGCATTATCAT-TGACAGTATTATCCTTTTTTTTTC 195
consensus_14129#0      --AGCTGCGTGCTTAGCTTTTTCTAGCATTATCAT-TGACAGTATTATCCTTTTTTTTTC 830
                          *        * * *    *  *      * *    *       *    *    *   

consensus_14129#2      TGTTAATTTTTGAGTTGCTTACTTCATGAAAATTGTAACTGACTAAAGCCTTCACCAACT 708
consensus_14129#3      AGCTTACTTACA--TTNNCCGTCTCAGTAATAGTACTGCTCCACACCACCTCAAATAAGT 715
consensus_14129#1      TGCACAATCTTG---TACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTAT 739
consensus_14129#4      TGCACAATCTTG---TACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTAT 252
consensus_14129#0      TGCACAATCTTG---TACAGGATTGTACTATGTACCATTTTTTTCTTACTTATGTTGTAT 887
                        *   * *       *       *     *         *        * *        *

consensus_14129#2      CTGAAGACCAATAGCTTGGTGAGTTGTTGGGGATGGGAGTTAAGTGCCTAGTCTTG---- 764
consensus_14129#3      CGACGGGACCACAGTGCAGTGGGGG----------------------------------- 740
consensus_14129#1      CATAATGATTGAAGTTACTTTCA-AAGTAACTACCAAATATATAGTGCAGATGTTTCA-- 796
consensus_14129#4      CATAATGATTGAAGTTACTTTCA-AAAAAAAAAAAAAAAAAAAAA--------------- 296
consensus_14129#0      CATAATGATTGAAGTTACTTTCCTGATTAACTACCAAATATATAGTGCAGATGTTTCATC 947
                       *           **     *                                        

consensus_14129#2      ---------------
consensus_14129#3      ---------------
consensus_14129#1      ---------------
consensus_14129#4      ---------------
consensus_14129#0      TGAAAAAAAAAAAAA 962