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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14382#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1927 fasta sequence
[GCTATTGATTGATTGATTGCTGATCGCTTCCAGTTCCAGCAATCCGTCGGAATATCTCCCCCCGATCTCCTCTTCTTCTTATCCACGCGCGGCACGACACGAGCAGCTTTTTGCCTGCGGCCGCTGCTGCTTCTGTGTGAGATTGTTCGCTGGGGATGGACGGCGGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCG-TGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGAGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCT-TTTTTGGGGAA-TTCTGTT-G-CAAG-GCG-GTTACTCCCA-TGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGACTGGGATTTCAGAGTGTCAGATGTTAAAAATCCAAACTTCGGCAAAATCTTGACGGTGACATGTGGTACAC-GGGGAAAATTAAGTCCTCCTTGCAATGCTGTAGGTTATATTGACCGTAAAGTTCTTGGTATCAATCATATGTACCACAGGCCAGCATGGAGGAGGCACAAGGACTGTACTGATGATTCCCCACATGAGGGACCTTTTAAAACTGATTCCCCGGCGTGGTGTTATGCACCATTTGAACCTGAAGGGTTACTAAGCTCACTGTCCGCGGTGTTGAGTACGATCATCGGGGTGCATTATGGGCATGTGCTTGTTCATATGAAGAGCCACACGGACAGACTAAAGCAGTGGTCTATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTCTGCACTTTTCACATGCAATTCCTTTG-AACAA-GCAACTG-TACACCTTCAGTTATATCTGTGTTACTGCCGGTGCGGCTGGAATCGTGTTCTGCATGTTCTACTTCCTGGTTGACATCCTGAATCTGCACTACCCATTCGCACCCCTGAAATGGACCGGCATGAACGCGATGCTGGTGTACGTGATGGCGGCGGCAGGCATCTTCGAAGGG--TTCTT-GAA-CGGGTGGTAC-TACGAGGGCACC-AACAACAC-ACTGGTTTACTGGGTGAGGAAGCATGTGTTCGTGAAGGTGTGGCATTCCACCCGTGTGGGCATCCTCCTCTACGTCCTCTTCGCGCAGATCTTGTTCTGGGCCCTTGTCGCCGGCCTCCTCCACCGTGCTCGCCTCTACTGGAAGCTCTAGCACTGCACTGGTACACTACACTACACT-ACAGCGTTTACACAGGGGCTGTTCGGATTGATGTCAT-TTTCAACCGAACTATTTTTTTTAAAATT-ACCAAAAAGAAGT-GTTGCATTTAGTTTGTTGCCAAACT-TTGATAAATACAT-AAGAAATCCT-ACCAAAATTTTGATAACATTGTTAACTTGTCAAAATTTGGTAAGGTTTATTTTCGCTACAATCTGAATAGCCTAGTCTTCAGATTTCTCGTTGATGGAATTGTGCATTTAGCCGTGATTAAAATTTGAAACCACAAGTGCAATTGGGATCTT]
[+] EMBL AK068780 [GCTATTGATTGATTGATTGCTGATCGCTTCCAGTTCCAGCAATCCGTCGGAATATCTCCCCCCGATCTCCTCTTCTTCTTATCCACGCGCGGCACGACACGAGCAGCTTTTTGCCTGCGGCCGCTGCTGCTTCTGTGTGAGATTGTTCGCTGGGGATGGACGGCGGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCG TGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGAGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCT TTTTTGGGGAA TTCTGTT G CAAG GCG GTTACTCCCA TGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGACTGGGATTTCAGAGTGTCAGATGTTAAAAATCCAAACTTCGGCAAAATCTTGACGGTGACATGTGGTACAC GGGGAAAATTAAGTCCTCCTTGCAATGCTGTAGGTTATATTGACCGTAAAGTTCTTGGTATCAATCATATGTACCACAGGCCAGCATGGAGGAGGCACAAGGACTGTACTGATGATTCCCCACATGAGGGACCTTTTAAAACTGATTCCCCGGCGTGGTGTTATGCACCATTTGAACCTGAAGGGTTACTAAGCTCACTGTCCGCGGTGTTGAGTACGATCATCGGGGTGCATTATGGGCATGTGCTTGTTCATATGAAGAGCCACACGGACAGACTAAAGCAGTGGTCTATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTCTGCACTTTTCACATGCAATTCCTTTG AACAA GCAACTG TACACCTTCAGTTATATCTGTGTTACTGCCGGTGCGGCTGGAATCGTGTTCTGCATGTTCTACTTCCTGGTTGACATCCTGAATCTGCACTACCCATTCGCACCCCTGAAATGGACCGGCATGAACGCGATGCTGGTGTACGTGATGGCGGCGGCAGGCATCTTCGAAGGG TTCTT GAA CGGGTGGTAC TACGAGGGCACC AACAACAC ACTGGTTTACTGGGTGAGGAAGCATGTGTTCGTGAAGGTGTGGCATTCCACCCGTGTGGGCATCCTCCTCTACGTCCTCTTCGCGCAGATCTTGTTCTGGGCCCTTGTCGCCGGCCTCCTCCACCGTGCTCGCCTCTACTGGAAGCTCTAGCACTGCACTGGTACACTACACTACACT ACAGCGTTTACACAGGGGCTGTTCGGATTGATGTCAT TTTCAACCGAACTATTTTTTTTAAAATT ACCAAAAAGAAGT GTTGCATTTAGTTTGTTGCCAAACT TTGATAAATACAT AAGAAATCCT ACCAAAATTTTGATAACATTGTTAACTTGTCAAAATTTGGTAAGGTTTATTTTCGCTACAATCTGAATAGCCTAGTCTTCAGATTTCTCGTTGATGGAATTGTGCATTTAGCCGTGATTAAAATTTGAAACCACAAGTGCAATTGGGATCTT]
[-] EMBL BI799240 [ TCTGTGTGAGATTGTTCGCTGGGGATGGACGG GGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCG CG CGCGG GACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCGCTGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGAGGATTCCAGACCG GGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCTCCCTTTGGGGAACTTCTGTTCGCCAAGCGCGCGTTACTCCCATTGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAc ]
[+] EMBL CB639333 [ TGTGAGATTGTTCGCTGGGGATGGACGGCGGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCG TGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGAGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCT TTTTTGGGGAA TTCTGTT G CAAG GCG GTTACTCCCA TGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAA ]
[+] EMBL CB680035 [ CGCTGGGGATGGACGGCGGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCG TGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGAGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCT TTTTTGGGGAA TTCTGTT G CAAG GCG GTTACTCCCA TGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGACTGGGATTTCACAGTGTCAGATGTTACAAATCCACACTTCGGCAACATCTTGACGGTGACATG ]
[+] EMBL AK059213 [ GGATGGACGGCGGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCG TGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGAGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCT TTTTTGGGGAA TTCTGTT G CAAG GCG GTTACTCCCA TGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGACTGGGATTTCAGAGTGTCAGATGTTAAAAATCCAAACTTCGGCAAAATCTTGACGGTGACATGTGGTACAC GGGGAAAATTAAGTCCTCCTTGCAATGCTGTAGGTTATATTGACCGTAAAGTTCTTGGTATCAATCATATGTACCACAGGCCAGCATGGAGGAGGCACAAGGACTGTACTGATGATTCCCCACATGAGGGACCTTTTAAAACTGATTCCCCGGCGTGGTGTTATGCACCATTTGAACCTGAAGGGTTACTAAGCTCACTGTCCGCGGTGTTGAGTACGATCATCGGGGTGCATTATGGGCATGTGCTTGTTCATATGAAGAGCCACACGGACAGACTAAAGCAGTGGTCTATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTCTGCACTTTTCACATGCAATTCCTTTG AACAA GCAACTG TACACCTTCAGTTATATCTGTGTTACTGCCGGTGCGGCTGGAATCGTGTTCTACATGTTCTACTTCCTGGTTGACATCCTGAATCTGCACTACCCATTCGCACCCCTGAAATGGACCGGCATGAACGCGATGCTGGTGTACGTGATGGCGGCGGCAGGCATCTTCGAAGGG TTCTT GAA CGGGTGGTAC TACGAGGGCACC AACAACAC ACTGGTTTACTGGGTGAGGAAGCATGTGTTCGTGAAGGTGTGGCATTCCACCCGTGTGGGCATCCTCCTCTACGTCCTCTTCGCGCAGATCTTGTTCTGGGCCCTTGTCGCCGGCCTCCTCCACCGTGCTCGCCTCTACTGGAAGCTCTAGCACTGCACTGGTACACTACACTACACT ACAGCGTTTACACAGGGGCTGTTCGGATTGATGTCAT TTTCAACCGAACTATTTTTTTTAAAATT ACCAAAAAGAAGT GTTGCATTTAGTTTGTTGCCAAACT TTGATAAATACAT AAGAAATCCT ACCA ]
[+] EMBL CB643449 [ ACACCGTATCTGCT TTTTTGGGGAA TTCTGTT G CAAG GCG GTTACTCCCA TGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGACTGGGATTTCAGAGTGTCAGATGTTAAAAATCCAAACTTCGGCAAAATCTTGACGGTGACATGTGGTACAC GGGGAAAATTAAGTCCTCCTTGCAATGCTGTAGGTTATATTGACCGTAAAGTTCTTGGTATCAATCATATGTACCACAGGCCAGCATGGAGGAGGCACAAGGACTGTACTGATGATTCCCCACATGAGGGACCTTTTAAAACTGATTCCCCGGCGTGGTGTTATGCACCATTTGAACCTGAAGGGTTACTAAGCTCACTGTCCGCGGTGTTGAGTACGATCATCGGGGTGCATTATGGGCATGTGCTTGTTCATATGAAGAGCCACACGGACAGACTAAAGCAGTGGTCTATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTCTGCACTTTTCACATGCAATTCCTTTG AACAA GCAACTG TACACCTTCAGTTATAT ]
[+] EMBL BE229341 [ CGAGTTTCAGGATGTACTTCTCCCAGTGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGACTGGGATTTCAGAGTGTCAGATGTTAAAAATCCAAACTTCGGCAAAATCTTGACGGTGACATGTGGTACACGGGGGAAAATTAAGTCCTCCTTGCAATGCTGTAGGTTATATTGACCGTAAAGTTCTTGGTATCAATCATATGTACCACAGGCCAGCATGGAGGRGGCACAAGGCCTKTACTGATGATTCCCCACATGAGGGMCCTTTTAAAACTGATTCCCCGGCGTGGTGTTATGCACCATTTGAACCTGAAGGGTTACTAAGCTCACTGTCCGCGGTGTTGAGTACGACAAYCGGGGTGCA TATGGGCAWGT CTTTTTCATATG AGAGCCACACGGACAGACTAAAGCAGTGGTCTATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTCTGCACTTKTCACAKGCAATSCCTGTGTATCAAGGCAACTGTTACACCGTCAGTgt ]
[-] EMBL CB680036 [ AGGGTTACTAAGCTCACTGTCCGCGGTGTTGAGTACGATCATCGGGGTGCATTATGGGCATGTGCTTGTTCATATGAAGAGCCACACGGACAGACTAAAGCAGTGGTCTATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTCTGCACTTTTCACATGCAATTCCTTTG AACAA GCAACTG TACACCTTCAGTTATATCTGTGTTACTGCCGGTGCGGCTGGAATCGTGTTCTGCATGTTCTACTTCCTGGTTGACATCCTGAATTTGCACTACCCATTCGCACCCCTGAAATGGACCGGCATGAACGCGATGCTGGTGTACGTGATGGCGGCGGCAGGCATTTTTGAAGGG TTTTT GAA CGGGTGGTAC TACGAGGGCACC AACAACAC ACTGGTTTACTGGGTGAGGAAGCATGTGTTTGTGAAGGTGTGGCATTCCACCCGTGTGGGCATCCTCCTTTACGTCCTTTTCGCGCAGATTTTGTTTTGGGCCCTTGTCGCCGGCCTCCTCCACCGTGCTTGCCTTTACTGGAAGCTTTAGCACTGCACTGGTACACTACACTACACT ACAGCGTTTACACAGGGGCTGTTCGGATTGATGTCAT TTTCAACCGAACTATTTTTTTTAAAATT ACCAAAAAGAAGT GTTGCATTTAGTTTGTTGCCAAACT TTGATAAATACAT AAGAAATCCT ACCAAAATTTTGATAACATTGTTAACTTGTCAAAATTTGGTAAGGTTTATTTTCGCTACAATTTGAATAGCCTAGTTTTCAGA ]
[-] EMBL CB652555 [ TCGGGGTGCATTATGGGCATGTGCTTGTTCATATGAAGAGCCACACGGACAGACTAAAGCAGTGGTCTATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTCTGCACTTTTCACATGCAATTCCTTTG AACAA GCAACTG TACACCTTCAGTTATATCTGTGTTACTGCCGGTGCGGCTGGAATCGTGTTCTGCATGTTCTACTTCCTGGTTGACATCCTGAATCTGCACTACCCATTCGCACCCCTGAAATGGACCGGCATGAACGCGATGCTGGTGTACGTGATGGCGGCGGCAGGCATCTTCGAAGGG TTCTT GAA CGGGTGGTAC TACGAGGGCACC AACAACAC ACTGGTTTACTGGGTGAGGAAGCATGTGTTCGTGAAGGTGTGGCATTCCACCCGTGTGGGCATCCTCCTCTACGTCCTCTTCGCGCAGATCTTGTTCTGGGCCCTTGTCGCCGGCCTCCTCCACCGTGCTCGCCTCTACTGGAAGCTTTAGCACTGCACTGGTACACTACACTACACT ACAGCGTTTACACAGGGGCTGTTCGGATTGATGTCAT TTTCAACCGAACTATTTTTTTTAAAATT ACCAAAAAGAAGT GTTGCATTTAGTTTGTTGCCAAACT TTGATAAATACAT AAGAAATCCT ACCAAAATTTTGATAACATTGTTAACTTGTCAAAATTTGGTAAGGTTTATTTTCGCTACAATCTGAATAGCCTAGTCTTCAGATTTCTCGTTGATGGAATTGTGCATTTACCCnt ]
[-] EMBL CB643450 [ ACTCTCCTCATTCTGGGGCTTACTCTGCACTTTTCACATGCAATTCCTTTG AACAA GCAACTG TACACCTTCAGTTATATCTGTGTTACTGCCGGTGCGGCTGGAATCGTGTTCTGCATGTTCTACTTCCTGGTTGACATCCTGAATCTGCACTACCCATTCGCACCCCTGAAATGGACCGGCATGAACGCGATGCTGGTGTACGTGATGGCGGCGGCAGGCATCTTCGAAGGG TTCTT GAA CGGGTGGTAC TACGAGGGCACC AACAACAC ACTGGTTTACTGGGTGAGGAAGCATGTGTTCGTGAAGGTGTGGCATTCCACCCGTGTGGGCATCCTCCTCTACGTCCTCTTCGCGCAGATCTTGTTCTGGGCCCTTGTCGCCGGCCTCCTCCACCGTGCTCGCCTTTACTGGAAGCTCTAGCACTGCACTGGTACACTACACTACACT ACAGCGTTTACACAGGGGCTGTTCGGATTGATGTCAT TTTCAACCGAACTATTTTTTTTAAAATT ACCAAAAAGAAGT GTTGCATTTAGTTTGTTGCCAAACT TTGATAAATACAT AAGAAATCCT ACCAAAATTTTGATAACATTGTTAACTTGTCAAAATTTGGTAAGGTTTATTTTCGGTACAATCTGAATAGCCTAGTCTTCAGATTTCTCGTTGATGGAATTGTGCATTTAGCCGTGATTAAAATTAGGAACCACAAGTGCAATTGGGA ]
[-] EMBL CB681692 [ CAATTCCTTTG AACAA GCAACTG TACACCTTCAGTTATATCTGTGTTACTGCCGGTGCGGCTGGAATCGTGTTCTGCATGTTCTACTTCCTGGTTGACATCCTGAATCTGCACTACCCATTCGCACCCCTGAAATGGACCGGCATGAACGCGATGCTGGTGTACGTGATGGCGGCGGCAGGCATCTTCGAAGGG TTCTT GAA CGGGTGGTAC TACGAGGGCACC AACAACAC ACTGGTTTACTGGGTGAGGAAGCATGTGTTCGTGAAGGTGTGGCATTCCACCCGTGTGGGCATCCTCCTCTACGTCCTCTTCGCGCAGATCTTGTTTTGGGCCCTTGTCGCCGGCCTCCTCCACCGTGCTCGCCTTTACTGGAAGCTCTAGCACTGCACTGGTACACTACACTACACT ACAGCGTTTACACAGGGGCTGTTCGGATTGATGTCAT TTTCAACCGAACTATTTTTTTTAAAATT ACCAAAAAGAAGT GTTGCATTTAGTTTGTTGCCAAACT TTGATAAATACAT AAGAAATCCT ACCAAAATTTTGATAACATTGTTAACTTGTCAAAATTTGGTAAGGTTTATTTTCGCTACAATCTGAATAGCCTAGTCTTCAGATTTCTCGTTGATGGAATTGTGCATTTAGCCGTGATTAAAATTTGAAACCCCAAGTGCAA ]
[+] EMBL BM037719 [ AAGGGGTTTCTTGGAACCGGGTGGTACTTACGAGGGCACCTAACAACACAACTGGTTTACTGGGTGAGGAAGCATGTGTTCGTGAAGGTGTGGCATTCCACCCGTGTGGGCATCCTCCT TACGTCCTCTTCGCGCAGATCTTGTTCTGGGCCCTTGTCGCCGGCCTCCTCCACCGTGCTCGCCTCTACTGGAAGCTCTAGCACTGCACTGGTACACTACACTACACTGACAGCGTTTACACAGGGGCTGTTCGGATTGATGTCATGTGTCAACCAAACTATTTTTTTTAAAATTGACCCAAAAGAAGTGGTTGCATTTAGTTTGTTGCCAAACTGTTGATAAATACATGAAGAAATCCTGACCCAAATTTTGATAACATTGTTAACTTGTCAAAATTTGGTAAGGTTTATTTTCGCTACAATCTGAATAGCCTAGTCTTCAGATTTCTCGTTGATGGAATTGTGCATTTAGCCGTGANTAAAATTNGAAAaaa ]
consensusID : consensus_14382#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 847 fasta sequence
[GTCGGCATATCTCTCCCCGATCTCCTCTTCTTCTTATCCACGCGCGGCACGACACGAGCAGCTTTTTGCCTGCGGCCGCTGCTGCTTCTGTGTGAGATTGTTCGCTGGGGATGGACGGCGGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCGTGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGCAAACATGCAGAGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCTTTTTTGGGGAATTCTGTTGCAAGGCGGTTACTCCCATGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGACTGGGATTTCCGAGTGTCAGATGTTAAAAATCCAAACTTCGGCAAAATCTTGACG]
[+] EMBL CB681691 [GTCGGCATATCTCTCCCCGATCTCCTCTTCTTCTTATCCACGCGCGGCACGACACGAGCAGCTTTTTGCCTGCGGCCGCTGCTGCTTCTGTGTGAGATTGTTCGCTGGGGATGGACGGCGGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCGTGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGCAAACATGCAGAGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCTTTTTTGGGGAATTCTGTTGCAAGGCGGTTACTCCCATGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGATTGTTG ]
[+] EMBL CB639334 [ TGTGAGATTGTTCGCTGGGGATGGACGGCGGTGGCCATGGCGTCTCGCGGCGGCACAGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCTACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCATCATGTTTTTTGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATA ]
[+] EMBL CB652554 [ GAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCGTGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGCAAACATGCAGAGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCTTTTTTGGGGAATTCTGTTGCAAGGCGGTTACTCCCATGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGACTGGGATTTCCGAGTGTCAGATGTTAAAAATCCAAACTTCGGCAAAATCTTGACG]
consensusID : consensus_14382#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence
[CTAAAAGGGCGGTGGTGGTTCTGTGTGAGATTGTCGTGGGGATGGACGGGGGTGGGCAGGGGTCGCGGGGACGGGCGGTGGGGGAGGAGGATCCGAACGCGCGGGGACGGTCGGGGAAAGAAGTGACGACGACGGGGTCACGTCACGAAAGGGCCTCCGCTCGCGGACAAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCTCACCGTCGCTCTGATGATACTGGTGGACGGGCCGGCGGCGAGTGGCGGTGATAGGCACGCGCCGTGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGTATTCCCCTCTCCCTCAAGAGGATTCCAGACGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTTGCTCCTTTGGGGAATTCTTGTTGCAAGGGGGTTACTCCCATGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTTGTCTTGCATACTTGGTGGTTGGAGTTCTAGAGATCGTAAGAAGAATGGAAGATTCAGGACAGTCAAGTCGGGGTTCTCGAT]
[-] EMBL BI799033 [CTAAAAGGGCGGTGGTGGTTCTGTGTGAGATTGTCGTGGGGATGGACGGGGGTGGGCAGGGGTCGCGGGGACGGGCGGTGGGGGAGGAGGATCCGAACGCGCGGGGACGGTCGGGGAAAGAAGTGACGACGACGGGGTCACGTCACGAAAGGGCCTCCGCTCGCGGACAAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCTCACCGTCGCTCTGATGATACTGGTGGACGGGCCGGCGGCGAGTGGCGGTGATAGGCACGCGCCGTGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGTATTCCCCTCTCCCTCAAGAGGATTCCAGACGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTTGCTCCTTTGGGGAATTCTTGTTGCAAGGGGGTTACTCCCATGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTTGTCTTGCATACTTGGTGGTTGGAGTTCTAGAGATCGTAAGAAGAATGGAAGATTCAGGACAGTCAAGTCGGGGTTCTCGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14382#0 GCTATTGATTGATTGATTGCTGATCGCTTCCAGTTCCAGCAATCCGTCGGAATATCTCCC 60
consensus_14382#1 ---------------------------------------------GTCGGCATATCTCTC 15
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 CCCGATCTCCTCTTCTTCTTATCCACGCGCGGCACGACACGAGCAGCTTTTTGCCTGCGG 120
consensus_14382#1 CCCGATCTCCTCTTCTTCTTATCCACGCGCGGCACGACACGAGCAGCTTTTTGCCTGCGG 75
consensus_14382#2 ----------------------------------------------------CTAAAAGG 8
**
consensus_14382#0 CCGCTGCTGCTTCTGTGTGAGATTGTTCGCTGGGGATGGACGGCGGTGGCCAGGGCGTCG 180
consensus_14382#1 CCGCTGCTGCTTCTGTGTGAGATTGTTCGCTGGGGATGGACGGCGGTGGCCAGGGCGTCG 135
consensus_14382#2 GCGGTGGTGGTTCTGTGTGAGATTGTC--GTGGGGATGGACGGGGGTGGGCAGGG-GTCG 65
** ** ** **************** ************* ***** ***** ****
consensus_14382#0 CGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGG 240
consensus_14382#1 CGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGG 195
consensus_14382#2 CG----GGGACGG-GCGGTGGGGGAGGAGGATCCGAACG-----CGCGGGGAC-GGTCGG 114
** ** **** ******* ************ ** ***** *** * ****
consensus_14382#0 GGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGA 300
consensus_14382#1 GGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGA 255
consensus_14382#2 GGAAAGAAG-TGACGACGACGGGGTC-ACGTC-ACGAAAGGGC--CTCCGC-TCGC-GGA 167
********* ************ *** ***** **** * *** ****** **** ***
consensus_14382#0 CCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATAC 360
consensus_14382#1 CCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATAC 315
consensus_14382#2 CA---AGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGC-TCACCGTCGCTCTGATGATAC 223
* ********************************* *********************
consensus_14382#0 TGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCGTGGAACGGATGCA 420
consensus_14382#1 TGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCGTGGAACGGATGCA 375
consensus_14382#2 TGGTGGACGG-GCCGGCGGCGAGTGGC-GGTGATAGGC-ACGCGCCGTGGAACGGATGCA 280
********** **************** ********** *********************
consensus_14382#0 ACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCT 480
consensus_14382#1 ACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCT 435
consensus_14382#2 ACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGG-TATTCCCCTCT 339
************************************************ ***********
consensus_14382#0 CCCTCAAG-----------AGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCT 529
consensus_14382#1 CCCTCAAGCAAACATGCAGAGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCT 495
consensus_14382#2 CCCTCAAG-----------AGGATTCCAGAC-GCGGTCGAGCTGTGAGGAGAGTAGTGCT 387
******** ************ ****************************
consensus_14382#0 CAGGACACTGAAGCT-GCTTTTTTGGGGAATTCT-GTTGCAAGGCGGTTACTCCCATGCC 587
consensus_14382#1 CAGGACACTGAAGCT-GCTTTTTTGGGGAATTCT-GTTGCAAGGCGGTTACTCCCATGCC 553
consensus_14382#2 CAGGACACTGAAGCTTGCTCCTTTGGGGAATTCTTGTTGCAAGGGGGTTACTCCCATGCC 447
*************** *** ************* ********* ***************
consensus_14382#0 CCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAA 647
consensus_14382#1 CCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAA 613
consensus_14382#2 CCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAA 507
************************************************************
consensus_14382#0 AGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAG 707
consensus_14382#1 AGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAG 673
consensus_14382#2 AGGATTTGTCTTGCATACTTGGTGGTTGGAGTTCTAGAGATCGTAA-GAAGAATG-GAAG 565
****** ******************** ***************** ******** ***
consensus_14382#0 GTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGATT 767
consensus_14382#1 GTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGATT 733
consensus_14382#2 ATTCAGGAC-AGTCAAGT-CGGGGTTCTCGAT---------------------------- 595
******** ******** **** ********
consensus_14382#0 GTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGAC 827
consensus_14382#1 GTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGAC 793
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 TGGGATTTCAGAGTGTCAGATGTTAAAAATCCAAACTTCGGCAAAATCTTGACGGTGACA 887
consensus_14382#1 TGGGATTTCCGAGTGTCAGATGTTAAAAATCCAAACTTCGGCAAAATCTTGACG------ 847
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 TGTGGTACACGGGGAAAATTAAGTCCTCCTTGCAATGCTGTAGGTTATATTGACCGTAAA 947
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 GTTCTTGGTATCAATCATATGTACCACAGGCCAGCATGGAGGAGGCACAAGGACTGTACT 1007
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 GATGATTCCCCACATGAGGGACCTTTTAAAACTGATTCCCCGGCGTGGTGTTATGCACCA 1067
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 TTTGAACCTGAAGGGTTACTAAGCTCACTGTCCGCGGTGTTGAGTACGATCATCGGGGTG 1127
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 CATTATGGGCATGTGCTTGTTCATATGAAGAGCCACACGGACAGACTAAAGCAGTGGTCT 1187
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 ATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTCTGCACTTTTCACATGCAATTCCT 1247
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 TTGAACAAGCAACTGTACACCTTCAGTTATATCTGTGTTACTGCCGGTGCGGCTGGAATC 1307
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 GTGTTCTGCATGTTCTACTTCCTGGTTGACATCCTGAATCTGCACTACCCATTCGCACCC 1367
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 CTGAAATGGACCGGCATGAACGCGATGCTGGTGTACGTGATGGCGGCGGCAGGCATCTTC 1427
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 GAAGGGTTCTTGAACGGGTGGTACTACGAGGGCACCAACAACACACTGGTTTACTGGGTG 1487
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 AGGAAGCATGTGTTCGTGAAGGTGTGGCATTCCACCCGTGTGGGCATCCTCCTCTACGTC 1547
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 CTCTTCGCGCAGATCTTGTTCTGGGCCCTTGTCGCCGGCCTCCTCCACCGTGCTCGCCTC 1607
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 TACTGGAAGCTCTAGCACTGCACTGGTACACTACACTACACTACAGCGTTTACACAGGGG 1667
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 CTGTTCGGATTGATGTCATTTTCAACCGAACTATTTTTTTTAAAATTACCAAAAAGAAGT 1727
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 GTTGCATTTAGTTTGTTGCCAAACTTTGATAAATACATAAGAAATCCTACCAAAATTTTG 1787
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 ATAACATTGTTAACTTGTCAAAATTTGGTAAGGTTTATTTTCGCTACAATCTGAATAGCC 1847
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 TAGTCTTCAGATTTCTCGTTGATGGAATTGTGCATTTAGCCGTGATTAAAATTTGAAACC 1907
consensus_14382#1 ------------------------------------------------------------
consensus_14382#2 ------------------------------------------------------------
consensus_14382#0 ACAAGTGCAATTGGGATCTT 1927
consensus_14382#1 --------------------
consensus_14382#2 --------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||