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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14503#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1921 fasta sequence
[CGATTCCCTCCCCTCCACCGACTCCTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCCTGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGCGCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGCACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA-CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT-CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA-TAAC-GGTGTTCTCTGCTCCCAATTATTGCGACC-AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC-TAAAACCAA-ATATTTCCTC-TTTC-TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTGTGGAGAACTGAAAATCA-TTCGAGGTACTAGCAAACTAGAAAGTTGCATCAAAAAACTTAAAAGG]
[+] EMBL AK101918 [CGATTCCCTCCCCTCCACCGACTCCTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCCTGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGCGCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGCACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTG ]
[+] EMBL AK102966 [ ATTCCCTCCCCTCCACCGACTCCTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCCTGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGCGCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGCACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATG ]
[+] EMBL CB677609 [ ACCGACTCCTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCCTGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGCGCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGCACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAA ]
[+] EMBL CB635252 [ ACCGACCCTTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCCTGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGCGCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGCACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAA ]
[+] EMBL CB673227 [ AAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCC ]
[+] EMBL CF322745 [ ACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGT ATTTTACGGTTTGGGNTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGA ]
[+] EMBL CF323142 [ ACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTACCGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAA ]
[+] EMBL AK111940 [ GAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAAATGTGACTAAGAAATTTCTACAGGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATA TTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCA ]
[+] EMBL AA752994 [ GACTACCGTATCATAGAA TAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCNATATATTTAAGCTCAATGGGCTTCCCTCGGAAGANAATCCTTACCTCTTCAATGGAGACTTTGTNGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTNCCTTGCNAGANGAAACCNTGAGAGCNAGANCATGAATAAGATATATGGTTTTGANGGAGAAGTNAGGTCNAANTTGGGANAANCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAAGTCTCTTTANTGTTGANGGTGTTAAGCTTTCNGATATTAGANCCNTCGATCGAATCCNTGAGCCTCC ]
[-] EMBL CB635253 [ ACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCGGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATGGTTCTATATACTGCCATGGCACTCTGTTACAAaaaaaaag ]
[-] EMBL CB673228 [ GCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTT TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTGTGGAGAACTGAAAATCA TTCAAGGTACTAGCAAACTAGAAAGTTGCATCAAAAAACTTAAAAGG]
[+] EMBL CA765318 [ aggggGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATA TTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTGTGGAGAACTGAAAATCATTTCGTGTTACTAGCAAACTAGAAAGGTGCATCAc ]
[+] EMBL BM421807 [ gaCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCACCCTCAACTTGGTAGAGGTCCAAGCAAAC CGGTGTTGGTCTTTCGTTTGGT CAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGATCCCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTANTAACGGGTGTTCTCTGCTCCCCATTATTGCGACCAAGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAACNTAAAACCAANAGTTGTCCTCGTTTCGTCACCGGTGCCACACCCNGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGT AC ACATATATCCATATCC CCTTCTTTC CCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAAT CCATTTTTCTAaaaaaaaaa ]
[+] EMBL CB678954 [ AGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTGTGGAGAACTGAAAATCA TTCG ]
[+] EMBL BM929236 [ CCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATA TTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATAC ]
consensusID : consensus_14503#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 622 fasta sequence
[CGCTTTATTAGCGTGGTCGCCCCCCGAGGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTCTACAAGAAAATAATCTGGCCTTGTTGTTCGATCCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTATAACCGGAGTCTCTGTTCCAATATTGGGCCAGATGGTACCAAGGTGCTTCATTCGGTTCACAGCTCCACACTAAACCAAATATTCCTTTTTTCACGGTGCCCACCCTGCCGTAAAGCCGATGGCCTACGCGACAACTTCCTCAGGATGTTCCAGTACCAC]
[+] EMBL BU572355 [CGCTTTATTAGCGTGGTCGCCCCCCGAGGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTCTACAAGAAAATAATCTGGCCTTGTTGTTCGATCCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTATAACCGGAGTCTCTGTTCCAATATTGGGCCAGATGGTACCAAGGTGCTTCATTCGGTTCACAGCTCCACACTAAACCAAATATTCCTTTTTTCACGGTGCCCACCCTGCCGTAAAGCCGATGGCCTACGCGACAACTTCCTCAGGATGTTCCAGTACCAC]
consensusID : consensus_14503#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 503 fasta sequence
[CCTGACTGGACTGAAGGAGTAGAAATACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTCACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTG]
[+] EMBL CF312604 [CCTGACTGGACTGAAGGAGTAGAAATACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTCACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14503#0 CGATTCCCTCCCCTCCACCGACTCCTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCC 60
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 TGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGC 120
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 GCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGC 180
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 ACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATC 240
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 ATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAAT 300
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 GATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAG 360
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 CTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAG 420
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 GAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCA 480
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 AAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTG 540
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 AAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTG 600
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 AAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGAT 660
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 GAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAA 720
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 TATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTG 780
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 GATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTACGCCTACCAGATTGTGTTACAA 840
consensus_14503#2 --------------------------------------------------------CCTG 4
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 ACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGT 900
consensus_14503#2 ACTGGACTGAAGGAGTAGAA-ATACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGT 63
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 CATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAG 960
consensus_14503#2 CATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAG 123
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 CTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGA 1020
consensus_14503#2 CTCAATGGGCTTCCCTCGGAAGAGAATCCTCACCTCTTCAATGGAGACTTTGTAGACAGA 183
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 GGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTT-CAAGTGCCTCTATCCGAC 1079
consensus_14503#2 GGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTT-CAAGTGCCTCTATCCGAC 242
consensus_14503#1 -----------------------------------CGCTTTATTAGCGTGGTCGCCCCCC 25
***** ** * ** *
consensus_14503#0 AGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTT 1139
consensus_14503#2 AGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTT 302
consensus_14503#1 GAG---GTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTT 82
* ******************************************************
consensus_14503#0 TGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATT 1199
consensus_14503#2 TGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATT 362
consensus_14503#1 TGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATT 142
************************************************************
consensus_14503#0 CTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCT 1259
consensus_14503#2 CTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCT 422
consensus_14503#1 CTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCT 202
************************************************************
consensus_14503#0 CTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCC 1319
consensus_14503#2 CTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCC 482
consensus_14503#1 CTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCC 262
************************************************************
consensus_14503#0 TCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAG 1379
consensus_14503#2 TCCTGAAGAAGGTCTAATGTG--------------------------------------- 503
consensus_14503#1 TCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAG 322
*********************
consensus_14503#0 AGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCT 1439
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 AGGCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTCTAC 382
consensus_14503#0 ACAAGAAAATAATCTGGACCTTGTTGTTCGATCCCATGAAGTGAAAGATGAAGGCTATGA 1499
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 AAGAAAATAATCTGGCCTTGTTGTTCGATCCCATGAAGTGAAAGATGAAGGCTATGAAAT 442
consensus_14503#0 AATTGAACATGATGGAAAGCTTATAACGGTGTTCTCTGCTCCCAATTATTGCGACCAGAT 1559
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 TGAACATGATGGAAAGCTTATAACCGGAGTCTCTGTTCCAATATTGGGCCAGATGGTACC 502
consensus_14503#0 GGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAACTAAAACCAAATATTTCCTC 1619
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 AAGGTGCTTCATTCGGTTCACAGCTCCACACTAAACCAAATATTCCTTTTTTCACGGTGC 562
consensus_14503#0 TTTCTCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAG 1679
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 CCACCCTGCCGTAAAGCCGATGGCCTACGCGACAACTTCCTCAGGATGTTCCAGTACCAC 622
consensus_14503#0 GATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTG 1739
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 ACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGT 1799
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 GTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTGTG 1859
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 GAGAACTGAAAATCATTCGAGGTACTAGCAAACTAGAAAGTTGCATCAAAAAACTTAAAA 1919
consensus_14503#2 ------------------------------------------------------------
consensus_14503#1 ------------------------------------------------------------
consensus_14503#0 GG 1921
consensus_14503#2 --
consensus_14503#1 --
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||