cluster # 14611

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Oryza sativa
cluster # 14611 cluster # 14611 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14611#0 length = 1279 sequences # 13

consensus_14611#1 length = 992 sequences # 1
consensus_14611#2 length = 232 sequences # 3

consensusID : consensus_14611#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1279
fasta sequence

                              [GGACTCATCGAGAGGAGCAAAGCAAAGCGAGCAGCTGAGCCCCGACGAGGTAGGGGGAGAGATGAGGGCGGTGGTGATCGCGCGCGCCGGCGGGCCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGT-CCCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCAGCGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGCGGGGCAGCTGCTCCCGGTGCCGGAGGGGGTGTCTCTGACGGACGCCGCCGGCTTGCCCGAGGTGGCCTGCACCGTCTGGTCGACCGTCTTCGTGACCAGCCACCTCTCCCCCAGCGAATCGTTCCTCATCCATGGTGGATCGAGTGGAATTGGTACATTTGCTATACAGATTGCAAAGCACCTTGGAATTAAGGTTTTTGTTACTGCAGGTAGTG-AGGAAAAACTAGCTGCCTGCAAAGGTTTGGGTGCCGATGTATGCATAAACTACAAAACTGAAGATTTCGTTGCACGTGTCAAAGAAGAAACAAATGGAAAGGGTGTTGATGTCATTCTGGACAACATCGGTGGATTGTATCTTCAGCGTAACCTGAACAGCTTAGCTGTTGATGGTAGACTTTTCATCATTGGTTTCCAAGGAGGCGCTGTAACTGAAGTGAACCTGCAACCCATGCTTGCTCGACGATTGACCATACAAGCTGCTGGACTACGCAACAGAAGCCTTGATAATAAAGCTCTGATTGTCAGTGAGGTGGAGAAAAATGTATGGCCTGCCGTTGTGCAAGGCAAGGTGAAACCAGTAATATACAAGACGTTTCCTCTGTCAGAAGCTGCTGAAGCTCACAAGTTGATGGAAGAAAGTTCCCACATTGGCAAGATACTATTGATTCCATGAATGTATTGGTATCTTGTTTGTGCTCTCACTATCGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTTGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGTGTCACAATA-CATGAAGAAAGTTATGTACTCATGCTCTCTCAACCAACGGATCATTTGGATATAAATGCGATTGCTTGGTTTGGAGTCCCAAAAAAAAAAAACAAAAANNAAA]

[+] EMBL AK099516             [GGACTCATCGAGAGGAGCAAAGCAAAGCGAGCAGCTGAGCCCCGACGAGGTAGGGGGAGAGATGAGGGCGGTGGTGATCGCGCGCGCCGGCGGGCCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGT CCCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCAGCGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGCGGGGCAGCTGCTCCAGGTGCCGGAGGGGGTGTCTCTGACGGACGCCGCCGGCTTGCCCGAGGTGGCCTGCACCGTCTGGTCGACCGTCTTCGTGACCAGCCACCTCTCCCCCAGCGAATCGTTCCTCATCCATGGTGGATCGAGTGGAATTGGTACATTTGCTATACAGATTGCAAAGCACCTTGGAATTAAGGTTTTTGTTACTGCAGGTAGTG AGGAAAAACTAGCTGCCTGCAAAGGTTTGGGTGCCGATGTATGCATAAACTACAAAACTGAAGATTTCGTTGCACGTGTCAAAGAAGAAACAAATGGAAAGGGTGTTGATGTCATTCTGGACAACATCGGTGGATTGTATCTTCAGCGTAACCTGAACAGCTTAGCTGTTGATGGTAGACTTTTCATCATTGGTTTCCAAGGAGGCGCTGTAACTGAAGTGAACCTGCAACCCATGCTTGCTCGACGATTGACCATACAAGCTGCTGGACTACGCAACAGAAGCCTTGATAATAAAGCTCTGATTATCAGTGAGGTGGAGAAAAATGTATGGCCTGCCGTTGTGCAAGGCAAGGTG AACCAGTAATATACAAGACGTTTCCTCTGTCAGAAGCTGCTGAAGCTCACAAGTTGATGGAAGAAAGTTCCCACATTGGCAAGATACTATTGATTCCATGAATGTATTGGTATCTTGTTTGTGCTCTCACTATCGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTTGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGTGTCACAATA CATGAAGAAAGTTATGTACTCATGCTCTCTCAACCAACGGATCATTTGGATATAAATGCGATTGCTTGG                                  ]
[+] EMBL AU172981             [GGACTCATCGAGAGGAGCAAAGCAAAGCGAGCAGCTGAGCCCCGACGAGGTAGGGGGAGAGATGAGGGCGGTGGTGATCGCGCGCGCCGGCGGGCCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGT CCCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCAGCGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGCGGGGCAGCTGCTCCCGGTGCCGGAGGGGGTGTCTNTGACGGACGCCGCCGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK059822             [   CTCATCGAGAGGAGCAAAGCAAAGCGAGCAGCTGAGCCCCGACGAGGTAGGGGGAGAGATGAGGGCGGTGGTGATCGCGCGCGCCGGCGGGCCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGT CCCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCAGCGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGCGGGGCAGCTGCTCCCGGTGCCGGAGGGGGTGTCTCTGACGGACGCCGCCGGCTTGCCCGAGGTGGCCTGCACCGTCTGGTCGACCGTCTTCGTGACCAGCCACCTCTCCCCCAGCGAATCGTTCCTCATCCATGGTGGATCGAGTGGAATTGGTACATTTGCTATACAGATTGCAAAGCACCTTGGAATTAAGGTTTTTGTTACTGCAGGTAGTG AGGAAAAACTAGCTGCCTGCAAAGGTTTGGGTGCCGATGTATGCATAAACTACAAAACTGAAGATTTCGTTGCACGTGTCAAAGAAGAAACAAATGGAAAGGGTGTTGATGTCATTCTGGACAACATCGGTGGATTGTATCTTCAGCGTAACCTGAACAGCTTAGCTGTTGATGGTAGACTTTTCATCATTGGTTTCCAAGGAGGCGCTGTAACTGAAGTGAACCTGCAACCCATGCTTGCTCGACGATTGACCATACAAGCTGCTGGACTACGCAACAGAAGCCTTGATAATAAAGCTCTGATTGTCAGTGAGGTGGAGAAAAATGTATGGCCTGCCGTTGTGCAAGGCAAGGTGAAACCAGTAATATACAAGACGTTTCCTCTGTCAGAAGCTGCTGAAGCTCACAAGTTGATGGAAGAAAGTTCCCACATTGGCAAGATACTATTGATTCCATGAATGTATTGGTATCTTGTTTGTGCTCTCACTATCGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTTGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGTGTCACAATA CATGAAGAAAGTTATGTACTCATGCTCTCTCAACCAACGGATCATTTGGATATAAATGCGATTGCTTGGT                                 ]
[+] EMBL CB653820             [           GAGGAGCCATGCAAAGCGAGCAGCTGAGCCCCGACGAGGTAGGGGGAGAGATGAGGGCGGTGGTGATCCCGCGCGCCGGCGGGCCGGAGGTGCTGGAGGAGCGGGACGTCCGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGT CCCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCAGCGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGCGGGGCAGCTGCTCCCGGTGCCGGAGGGGGTGTCTCTGACGGACGCCGCCGGCTTGCCCGAGGTGGCCTGCACCGTCTGGTCGACCGTCTTCGTGACCAGCCACCTCTCCCCCAGCGAATCGTTCCTCATCCATGGTGGATCGAGTGGAATTGGTACATTTGCTATACAGATTGCAAAGCACCTTGGAATTAAGGTTTTTGTTACTGCAGGTAGTG AGGAAAAACTAGCTGCCTGCAAAGGTTTGGGTGCCGATGTATGCATAAACTACAAAACTGAAGATTTCGTTGCACGTGTCAAAGAAGAAACCAATGGAAAGGGTGTTGATGTCCTTCTGGACAACATCGGTGGATTGTATCTTCCGCGTAACCTGAACAGCTTAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BP185056             [               AGCAAAGCAAAGCGAGCAGCTGAGCCCCGACGAGGTAGGGGGAGAGATGAGGGCGGTGGTGATCGCGCGCGCCGGCGGGCCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGT CCCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCAGCGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGCGGGGCAGCTGCTCCCGGTGCCGGAGGGGGTGTCTCTGACGGACGCCGCCGGCTTGCCCGAGGTGGCCTGCACCGTCTGGTCGACCGTCTTCGTGACCAGCCACCTCTCCCCCAGCGAATCGTTCCTCATCCATGGTGGATCGAGTGGAATTGGTACATTTGCTATACAGATTGCAAAGCACCTTGGAATTAAGGTTTTTGTTACTGCAGGTAGTGAAGGAAAAACTAGCTGCCTGCAAAGGTTTGGGTGCCGATGTATGCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK104587             [                           CGAGCAGCTGAGCCCCGACGAGGTAGGGGGAGAGATGAGGGCGGTGGTGATCGCGCGCGCCGGCGGGCCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGT CCCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCAGCGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGCGGGGCAGCTGCTCCCGGTGCCGGAGGGGGTGTCTCTGACGGACGCCGCCGGCTTGCCCGAGGTGGCCTGCACCGTCTGGTCGACCGTCTTCGTGACCAGCCACCTCTCCCCCAGCGAATCGTTCCTCATCCATGGTGGATCGAGTGGAATTGGTACATTTGCTATACAGATTGCAAAGCACCTTGGAATTAAGGTTTTTGTTACTGCAGGTAGTG AGGAAAAACTAGCTGCCTGCAAAGGTTTGGGTGCCGATGTATGCATAAACTACAAAACTGAAGATTTCGTTGCACGTGTCAAAGAAGAAACAAATGGAAAGGGTGTTGATGTCATTCTGGACAACATCGGTGGATTGTATCTTCAGCGTAACCTGAACAGCTTAGCTGTTGATGGTAGACTTTTCATCATTGGTTTCCAAGGAGGCGCTGTAACTGAAGTGAACCTGCAACCCATGCTTGCTCGACGATTGACCATACAAGCTGCTGGACTACGCAACAGAAGCCTTGATAATAAAGCTCTGATTGTCAGTGAGGTGGAGAAAAATGTATGGCCTGCCGTTGTGCAAGGCAAGGTGAAACCAGTAATATACAAGACGTTTCCTCTGTCAGAAGCTGCTGAAGCTCACAAGTTGATGGAAGAAAGTTCCCACATTGGCAAGATACTATTGATTCCATGAATGTATTGGTATCTTGTTTGTGCTCTCACTATCGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTTGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGTGTCACAATA CATGAAGAAAGTTATGTACTCATGCTCTCTCAACCAACGGATCATTTGGATATAAATGCGATTG                                       ]
[+] EMBL AU056248             [                                AGCTGAGCCCCGACGAGGTAGGGGGAGAGATGAGGGCGGTGGTGATCGCGCGCGCCGGCGGGCCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCNCGCCGCCCGGCG GTNCCCCTTANCCGGGCCTCGAGTGCTCCGGNACCATCCTCGCCCTCGGCCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB649640             [                                                GGTAGGCGGAGAGATGAGGGCGGTGGTGATCGCGCGCGCCGGTGGGCCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCTACCGCGCCGACTCCGTCCAGCGCCAGGGCCGGTACCCCGCTCCGCCCGGCGCGT CCCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCAACGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGCGGGGCATCTGCTCCCGGTGCCGGAGGGGGTGTCTCTGACGGACGCCGCCGGCTTGCCCGAGGTGGCCTGCACCGTCTGGTCGACCGTCTTCCTGACCAGCCACCTCTCCCCCAGCGAATCTTTCCTCATCCATGGTGGATCGAGTGGAATTGGTACATTTGCTCTACACATTGCAAAGCACCTTGGAATTGAGGTTTTTGTTCCTGCATGTAGTG AGGAAACACTAGCTGCCTGCCAAGGTTTGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB653859             [                                                                                                                                                       GAGGTGNTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGT CCCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCAGCGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGCGGGGCAGCTGCTCCCGGTGCCGGAGGGGGTGTCTCTGACGGACGCCGCCGGCTTGCCCGAGGTGGCCTGCACCGTCTGGTCGACCGTCTTCGTGACCAGCCACCTCTCCCCCAGCGAATCGTTCCTCATCCATGGTGGATCGAGTGGAATTGGTACATTTGCTATACAGATTGCACAGCACCTTGGAATTAACGTTTTTGTTACTGCAGGTAGTG AGGAAAAACTAGCTGCCTGCTAAGGTTTGGGTGCCGATGTATGCATAAACTACAAAACTGAAGATTTCGTTGCACGTGTCAAACAAGAAACAAATGGAAAGGGTGTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB654803             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGGTGGATCGAGTGGAATTGGTACATTTGCTATACAGATTGCAAAGCACCTTGGAATTAAGGTTTTTGTTACTGCAGGTAGTG AGGAAAAACTAGCTGCCTGCAAAGGTTTGGGTGCCGATGTATGCATAAACTACAAAACTGAAGATTTCGTTGCACGTGTCAAAGAAGAAACAAATGGAAAGGGTGTTGATGTCATTCTGGACAACATCGGTGGATTGTATCTTCAGCGTAACCTGAACAGCTTAGCTGTTGATGGTAGACTTTTCATCATTGGTTTCCAAGGAGGCGCTGTAACTGAAGTGAACCTGCAACCCATGCTTGCTCGACGATTGACCATACAAGCTGCTGGACTACGCAACAGAAGCCTTGATAATAAAGCTCTGATTGTCAGTGAGGTGGAGAAAAATGTATGGCCTGCCGTTGTGCAAGGCAAGGTGAAACCAGTAATATACAAGACGTTTCCTCTGTCAGAAGCTGCTGAAGCTCACAAGTTGATGGAAGAAAGTTCCCACATTGGCAAGATACTATTGATTCCATGAATGTATTGGTATCTTGTTTGTGCTCTCACTATCGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTTGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGTGTCACAATA CATGAAGAAAGTTATGTACTCATGCTCTCTCAACCAACGGATCATAAGGATATAAATGCGATTGCTTGGTTTGGA                            ]
[-] EMBL CB653860             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACATTTGCTATACAGATTGCAAAGCACCTTGGAATTAAGGTTTTTGTTACTGCAGGTAGTG AGGAAAAACTAGCTGCCTGCAAAGGTTTGGGTGCCGATGTATGCATAAACTACAAAACTGAAGATTTCGTTGCACGTGTCAAAGAAGAAACAAATGGAAAGGGTGTTGATGTCATTTTGGACAACATCGGTGGATTGTATTTTCAGCGTAACCTGAACAGCTTAGCTGTTGATGGTAGACTTTTCATCATTGGTTTCCAAGGAGGCGCTGTAACTGAAGTGAACCTGCAACCCATGCTTGCTCGACGATTGACCATACAAGCTGCTGGACTACGCAACAGAAGCCTTGATAATAAAGCTCTGATTGTCAGTGAGGTGGAGAAAAATGTATGGCCTGCCGTTGTGCAAGGCAAGGTGAAACCAGTAATATACAAGACGTTTCTTCTGTCAGAAGCTGCTGAAGCTCACAAGTTGATGGAAGAAAGTTCCCCCATTGGCAAGATACTATTGATTCCATGAATGTATTGGTATCTTGTTTGTGCTCTCACTATCGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTTGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGTGTCCCAATA CATGAAGAAAGGTATGTACTCA                                                                                 ]
[-] EMBL CB649641             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTATACAGATTGCAAAGCACCTTGGAATTAAGGTTTTTGTTACTGCAGGTAGTG AGGAAAAACTAGCTGCCTGCAAAGGTTTGGGTGCCGATGTATGCATAAACTACAAAACTGAAGATTTCGTTGCACGTGTCAAAGAAGAAACAAATGGAAAGGGTGTTGATGTCATTCTGGACAACATCGGTGGATTGTATCTTCAGCGTAACCTGAACAGCTTAGCTGTTGATGGTAGACTTTTCATCATTGGTTTCCAAGGAGGCGCTGTAACTGAAGTGAACCTGCAACCCATGCTTGCTCGACGATTGACCATACAAGCTGCTGGACTACGCAACAGAAGCCTTGATAATAAAGCTCTGATTGTCAGTGAGGTGGAGAAAAATGTATGGCCTGCCGTTGTGCAAGGCAAGGTGAAACCAGTAATATACAAGACGTTTCTTCTGTCAGAAGTTGCTGAAGCTCACAAGTTGATGGAAGAAAGTTCCCACATTGGCAAGATACTATTGATTCCATGAATGTATTGGTATCTTGTTTGTGCTCTCATTATCGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTTGATCTTGCATGTTGACAAGAGTGGAGGTAGTATGTCAGAAAATTATGTGTCACAATAGCATGAAGAAAGTTACGTACTCATGCTTTCTCAAaaaaaaggg                                                             ]
[+] EMBL AU058444             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AATGTATTGGTATCTNGTTTGTGNNCNCACTATCGGAGCCACTTTAAACACTGTATATTTGGTTTNTCCTTTGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGTGTCACAATA CATGAAGNAAGTTATGTACTCATGCTCTNTCAACCAACGGATCATTTGGATATAAATGCGATTGCTTGGTTTGGAGTCCCAAAAAAAAAAAACAAAAANNAAA]




>consensus_14611#0
GGACTCATCGAGAGGAGCAAAGCAAAGCGAGCAGCTGAGCCCCGACGAGGTAGGGGGAGA
GATGAGGGCGGTGGTGATCGCGCGCGCCGGCGGGCCGGAGGTGCTGGAGGAGCGGGACGT
CGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGG
CGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGTC
CCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTC
CCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCAGCGGCGGGTATGCGGAGAA
GGTGGTGGTGCCGGCGGGGCAGCTGCTCCCGGTGCCGGAGGGGGTGTCTCTGACGGACGC
CGCCGGCTTGCCCGAGGTGGCCTGCACCGTCTGGTCGACCGTCTTCGTGACCAGCCACCT
CTCCCCCAGCGAATCGTTCCTCATCCATGGTGGATCGAGTGGAATTGGTACATTTGCTAT
ACAGATTGCAAAGCACCTTGGAATTAAGGTTTTTGTTACTGCAGGTAGTGAGGAAAAACT
AGCTGCCTGCAAAGGTTTGGGTGCCGATGTATGCATAAACTACAAAACTGAAGATTTCGT
TGCACGTGTCAAAGAAGAAACAAATGGAAAGGGTGTTGATGTCATTCTGGACAACATCGG
TGGATTGTATCTTCAGCGTAACCTGAACAGCTTAGCTGTTGATGGTAGACTTTTCATCAT
TGGTTTCCAAGGAGGCGCTGTAACTGAAGTGAACCTGCAACCCATGCTTGCTCGACGATT
GACCATACAAGCTGCTGGACTACGCAACAGAAGCCTTGATAATAAAGCTCTGATTGTCAG
TGAGGTGGAGAAAAATGTATGGCCTGCCGTTGTGCAAGGCAAGGTGAAACCAGTAATATA
CAAGACGTTTCCTCTGTCAGAAGCTGCTGAAGCTCACAAGTTGATGGAAGAAAGTTCCCA
CATTGGCAAGATACTATTGATTCCATGAATGTATTGGTATCTTGTTTGTGCTCTCACTAT
CGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTTGATCTTGCATGTTGACAAGAG
TGGACGTACTATGTCAGAAAATTATGTGTCACAATACATGAAGAAAGTTATGTACTCATG
CTCTCTCAACCAACGGATCATTTGGATATAAATGCGATTGCTTGGTTTGGAGTCCCAAAA
AAAAAAAACAAAAANNAAA

consensusID : consensus_14611#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 992
fasta sequence

                              [CCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGTCCTCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCGGCGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGTGGGGCAGCTGCTCCCGGTGCCGGTGGGGGTGTTTTTGTCGGTCTCTCTCTTTTTGTCCTATGTGTTCTGTTTCTTTTGATTGTTTCTGTCTATTATCTCTCATTTTTTTCTCATTTTATTTCCTATTATTTTTTATCTTTTTATTAGATTTATTCTTTTTTTGTTATTTTTTTTTTACTTATTTTTTTGTGTTTTCTTTCTTTATTTTTTTTTTTTTTTTTATCCTATATGTATTATTTTTTTTTTTATTTCTCTTTTCCCCCTTTTCTTTTTATTTTTTTTCTATTGCTCTCTTCTTTTTTTTTATTTTTTTTTATTTTTTTTCCTACATCCCTTTTATCATCTTTTATTACCTTTCATTATTTTTATTTATAGTGTCATATTACTAATTATTTATTTCGTGTATTCCCTTTATTCTCCTTTTCACCCATGCTCCATCTAACTTTTCTTTACTCCTTTCTACTTCTCTTCTCCCACGCACTTGTTTGTTTTTCTATGTCTTTTTTATGCTGTTTTTGTTTCATCGTTTCATATATTCTTTATTTTAGTTTATATTTTCACTATTTTATTTCATAATGTCTATTTGTTTGTCTCCTTCGTCAATCTAAATTTGTATATATTTATTTTTTTGTTTTATGTTCTTTTGCTCCTGTTCTTTTGCTTGTTATTGATTTATTATTTGTATGTGTTTACTAGCTTCCTTTTATTATT]

[+] EMBL BE040961             [CCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGTCCTCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCGGCGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGTGGGGCAGCTGCTCCCGGTGCCGGTGGGGGTGTTTTTGTCGGTCTCTCTCTTTTTGTCCTATGTGTTCTGTTTCTTTTGATTGTTTCTGTCTATTATCTCTCATTTTTTTCTCATTTTATTTCCTATTATTTTTTATCTTTTTATTAGATTTATTCTTTTTTTGTTATTTTTTTTTTACTTATTTTTTTGTGTTTTCTTTCTTTATTTTTTTTTTTTTTTTTATCCTATATGTATTATTTTTTTTTTTATTTCTCTTTTCCCCCTTTTCTTTTTATTTTTTTTCTATTGCTCTCTTCTTTTTTTTTATTTTTTTTTATTTTTTTTCCTACATCCCTTTTATCATCTTTTATTACCTTTCATTATTTTTATTTATAGTGTCATATTACTAATTATTTATTTCGTGTATTCCCTTTATTCTCCTTTTCACCCATGCTCCATCTAACTTTTCTTTACTCCTTTCTACTTCTCTTCTCCCACGCACTTGTTTGTTTTTCTATGTCTTTTTTATGCTGTTTTTGTTTCATCGTTTCATATATTCTTTATTTTAGTTTATATTTTCACTATTTTATTTCATAATGTCTATTTGTTTGTCTCCTTCGTCAATCTAAATTTGTATATATTTATTTTTTTGTTTTATGTTCTTTTGCTCCTGTTCTTTTGCTTGTTATTGATTTATTATTTGTATGTGTTTACTAGCTTCCTTTTATTATT]




>consensus_14611#1
CCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAG
GTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGC
CGGTACCCCGCGCCGCCCGGCGCGTCCTCTTACCCGGGCCTCGAGTGCTCCGGCACCATC
CTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTG
CTCAGCGGCGGCGGGTATGCGGAGAAGGTGGTGGTGCCGGTGGGGCAGCTGCTCCCGGTG
CCGGTGGGGGTGTTTTTGTCGGTCTCTCTCTTTTTGTCCTATGTGTTCTGTTTCTTTTGA
TTGTTTCTGTCTATTATCTCTCATTTTTTTCTCATTTTATTTCCTATTATTTTTTATCTT
TTTATTAGATTTATTCTTTTTTTGTTATTTTTTTTTTACTTATTTTTTTGTGTTTTCTTT
CTTTATTTTTTTTTTTTTTTTTATCCTATATGTATTATTTTTTTTTTTATTTCTCTTTTC
CCCCTTTTCTTTTTATTTTTTTTCTATTGCTCTCTTCTTTTTTTTTATTTTTTTTTATTT
TTTTTCCTACATCCCTTTTATCATCTTTTATTACCTTTCATTATTTTTATTTATAGTGTC
ATATTACTAATTATTTATTTCGTGTATTCCCTTTATTCTCCTTTTCACCCATGCTCCATC
TAACTTTTCTTTACTCCTTTCTACTTCTCTTCTCCCACGCACTTGTTTGTTTTTCTATGT
CTTTTTTATGCTGTTTTTGTTTCATCGTTTCATATATTCTTTATTTTAGTTTATATTTTC
ACTATTTTATTTCATAATGTCTATTTGTTTGTCTCCTTCGTCAATCTAAATTTGTATATA
TTTATTTTTTTGTTTTATGTTCTTTTGCTCCTGTTCTTTTGCTTGTTATTGATTTATTAT
TTGTATGTGTTTACTAGCTTCCTTTTATTATT

consensusID : consensus_14611#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 232
fasta sequence

                              [AGAGGACGAGACAAGGGGGGAAGAAAGTTCCCACATTGGCAAGATACTATTGATTCCATGAATGTGTTGGTATCTTGTTTGTGCTCTCACTATGGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTTGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGTGTCCCAATACATGAAGAAAGTTATGTAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760569             [AGAGGACGAGACAAGGGGGGAAGAAAGTTCCCACATTGGCAAGATACTATTGATTCCATGAATGTGTTGGTATCTTGTTTGTGCTCTCACTATGGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTCGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGTGTCCCAATACATGAAGAAAGTTATGTACTAAAAAAAAAAAAAAAAA      ]
[+] EMBL CF307980             [                                                                                                                        GGTTTGTCCTTTGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGTGTCACAATACATGAAGAAAGTTATGTAAAAAAAAAAAAAAAAAAAAAAAAA ]
[-] EMBL CF307979             [                                                                                                                         GTTTGTCCTTTGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGTGTCCCAATACATGAAGAAAGTTATGTAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14611#2
AGAGGACGAGACAAGGGGGGAAGAAAGTTCCCACATTGGCAAGATACTATTGATTCCATG
AATGTGTTGGTATCTTGTTTGTGCTCTCACTATGGGAGCCACTTTAAACACTGTATATTT
GGTTTGTCCTTTGATCTTGCATGTTGACAAGAGTGGACGTACTATGTCAGAAAATTATGT
GTCCCAATACATGAAGAAAGTTATGTAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14611#0      GGACTCATCGAGAGGAGCAAAGCAAAGCGAGCAGCTGAGCCCCGACGAGGTAGGGGGAGA 60
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      ------------------------------------------------------------
                                                                                   

consensus_14611#0      GATGAGGGCGGTGGTGATCGCGCGCGCCGGCGGGCCGGAGGTGCTGGAGGAGCGGGACGT 120
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      ----------------------------------CCGGAGGTGCTGGAGGAGCGGGACGT 26
                                                                                   

consensus_14611#0      CGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGG 180
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      CGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGG 86
                                                                                   

consensus_14611#0      CGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGTC 240
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      CGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGTC 146
                                                                                   

consensus_14611#0      CCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTC 300
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      CTCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTC 206
                                                                                   

consensus_14611#0      CCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCAGCGGCGGGTATGCGGAGAA 360
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      CCGCTGGGCCGTCGGTGACCAGGTGTGCGCGCTGCTCAGCGGCGGCGGGTATGCGGAGAA 266
                                                                                   

consensus_14611#0      GGTGGTGGTGCCGGCGGGGCAGCTGCTCCCGGTGCCGGAGGGGGTGTCTCTGACGGACGC 420
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      GGTGGTGGTGCCGGTGGGGCAGCTGCTCCCGGTGCCGGTGGGGGTGTTTTTGTCGGTCTC 326
                                                                                   

consensus_14611#0      CGCCGGCTTGCCCGAGGTGGCCTGCACCGTCTGGTCGACCGTCTTCGTGACCAGCCACCT 480
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      TCTCTTTTTGTCCTATGTGTTCTGTTTCTTTTGATTGTTTCTGTCTATTATCTCTCATTT 386
                                                                                   

consensus_14611#0      CTCCCCCAGCGAATCGTTCCTCATCCATGGTGGATCGAGTGGAATTGGTACATTTGCTAT 540
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      TTTTCTCATTTTATTTCCTATTATTTTTTATCTTTTTATTAGATTTATTCTTTTTTTGTT 446
                                                                                   

consensus_14611#0      ACAGATTGCAAAGCACCTTGGAATTAAGGTTTTTGTTACTGCAGGTAGTGAGGAAAAACT 600
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      ATTTTTTTTTTA----CTTATTTTTTTGTGTTTTCTTTCTTTATTTTTTTTTTTTTTTTT 502
                                                                                   

consensus_14611#0      AGCTGCCTGCAAAGGTTTGGGTGCCGATGTATGCATAAACTACAAAACTGAAGATTTCGT 660
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      ATCCTATATGTATTATTTTTTTTTTTATTTCTCTTTTCCCCCTTTTCTTTTTATTTTTTT 562
                                                                                   

consensus_14611#0      TGCACGTGTCAAAGAAGAAACAAATGGAAAGGGTGTTGATGTCATTCTGGACAACATCGG 720
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      TCTATTGCTC-----------------------------TCTTCTTTTTTTTTATTTTTT 593
                                                                                   

consensus_14611#0      TGGATTGTATCTTCAGCGTAACCTGAACAGCTTAGCTGTTGATGGTAGACTTTTCATCAT 780
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      TTTATTTTTTTTCCTACATCCCTTTTATCATCTTTTATTACCTTTCATTATTTTTATTTA 653
                                                                                   

consensus_14611#0      TGGTTTCCAAGGAGGCGCTGTAACTGAAGTGAACCTGCAACCCATGCTTGCTCGACGATT 840
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      TAGTGTCATATTACTAATTATTTATTTCGTGTATTCCCTTTATTCTCCTTTTCACCCATG 713
                                                                                   

consensus_14611#0      GACCATACAAGCTGCTGGACTACGCAACAGAAGCCTTGATAATAAAGCTCTGATTGTCAG 900
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      CTCCATCTAACTTTTCTTTACTCCTTTCTACTTCTCTTCTCCCACGCACTTGTTTGTT-- 771
                                                                                   

consensus_14611#0      TGAGGTGGAGAAAAATGTATGGCCTGCCGTTGTGCAAGGCAAGGTGAAACCAGTAATATA 960
consensus_14611#2      ------------------------------------------------------------
consensus_14611#1      ---------------TTTCTATGTCTTTTTTATGCTGTTTTTGTTTCATCGTTTCATATA 816
                                                                                   

consensus_14611#0      CAAGACGTTTCCTCTGTCAGAAGCTGCTGAAGCTCACAAGTTGATGGAAGAAAGTTCCCA 1020
consensus_14611#2      ---------------------------AGAGGACGAGACAAGGGGGGAAGAAAGTTCCCA 33
consensus_14611#1      TTCTTTATTTTAGTTTATATTTTCACTATTTTATTTCATAATG-TCTATTTGTTTGTCTC 875
                                                            *    *    *      *  *  

consensus_14611#0      CATTGGCAAGATACTATTGATTCCATGAATGTATTGGTATCTTGTTTGTGCTCTCACTAT 1080
consensus_14611#2      CATTGGCAAGATACTATTGATTCCATGAATGTGTTGGTATCTTGTTTGTGCTCTCACTAT 93
consensus_14611#1      CTTCGTCAATCTAAATTTG----TATATATTTATTTTTTTGTTTTATGTTCTTTTGCTCC 931
                       * * * ***  **   ***     **  ** * **  * * ** * *** ** *  **  

consensus_14611#0      CGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTTGATCTTGCATGTTGACAAGAG 1140
consensus_14611#2      GGGAGCCACTTTAAACACTGTATATTTGGTTTGTCCTTTGATCTTGCATGTTGACAAGAG 153
consensus_14611#1      TG----TTCTTT---TGCT-TGTTATTGATTTATTATTTG----TATGTGTTTACTAGCT 979
                        *      ****     ** * *  *** *** *  ****    *   **** ** **  

consensus_14611#0      TGGACGTACTATGTCAGAAAATTATGTGTCACAATACATGAAGAAAGTTATGTACTCATG 1200
consensus_14611#2      TGGACGTACTATGTCAGAAAATTATGTGTCCCAATACATGAAGAAAGTTATGTAAAAAAA 213
consensus_14611#1      TCCTTTTATTATT----------------------------------------------- 992
                       *     ** ***                                                

consensus_14611#0      CTCTCTCAACCAACGGATCATTTGGATATAAATGCGATTGCTTGGTTTGGAGTCCCAAAA 1260
consensus_14611#2      AAAAAAAAAAAAAAAAAAA----------------------------------------- 232
consensus_14611#1      ------------------------------------------------------------
                                                                                   

consensus_14611#0      AAAAAAAACAAAAANNAAA 1279
consensus_14611#2      -------------------
consensus_14611#1      -------------------