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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14630#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2979 fasta sequence
[ACTCGACTCGAGTCGAGAGAGACTCGTCGTCATTAGCCATCACTACTAGATCCGCCATTTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTCCGTCCGCCCCCAACCTCCCCCACCCAATTCGATCGCCTCCCCCACCCAGATCTCGCCGCCCGCCCGCCCGCCCGCCATGCCGTCGGCGACCGACCCCCCGGCGGCGCTCCCGCTAACCCTCGACCTCGACGACTTCAAGGGGGACTTCTCGTTCGACGCGCTGTTCGGGACCCTGGTGGACGAGCTGCTGCCGGAGTTCCGCGGGGACGACGCGCCCGGGGCGCCCCCGCCCCCGCCGCCCGTGCTCGGGGCCGCGCCCCCCGTCTTCCCCGCCGTCGACGAGCTTCTGGGGCTCTTCAAGCACTCATGCAAGGAGCTCGTCGATCTCCGCCGCCAGATTGACAAGAGGCTCCAGAATCTCAAGAAGGAGGTGGCCACGCAGGACGCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTTATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAAAATTGGTGATCATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGATGGAGTTCAACAGCACACCAGGGGATCTTATGGAACTTTCTCCTTTATTTTCTGATGACAGTCGTGTTGCTGAGGCAGCTTCAATTGCACAGAAATTGCGTTCATTTGCCGAGGAGGATGTTGGTAGACATGGTGTACCATCAGCTGTTGGTTCTGCTAATGCAAGTCGTGGTTTGGAGGTTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAATAGATTGTTAGCTCGGTTTGATACTGCATCACAGAGGCGGGAGATGTCTACGATGGCAGAATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATGTTGCAACACGGCCAATGTTTATTGATGTGGATATTATGAGCATTGATATTCAAGTTGTTCTTGGTGAGGAGGGGCCACAAGCTGACCACATTTGTATTGCAGAGGGCCTCTCTGTATTGTACAAGGAAATTGCAGATACTGTGAGGAGAGAAGCAACTACAATAATGGCTGTATTTCCTTCTCCAAATGAGGTCATGTCAATTCTTGTGCAGAGAGTTTTAGAACAAAGGGTAACAGCAATTCTTGATAAACTTCTTATTAAGCCCTCTCTTGCTAACTTACCTCCTATAGAAGAGGGTGGTCTTCTGCATTATCTCAGAGTTCTGGCGGTAGCATATGACAAGACAAAAGAACTTGCTAAAGAGTTGCAATCTATCAGTTGTGGGGATTTGGACATTGAAGGTCTCACTGAATCCATATTTGTTTCCCACAAAGATGAGTACACAGAATTTGAACAGGCATCACTCAGACAACAATACCAATCAAAGATGGCTGAATTGAGAGCTGAGGCCAAGCAGCAATCTGAGTCAACTGGCACAATTGGACGTTCAAATGGAGCGGCTGTGACTACATCACTTCAGCAGCAGATATCAGTTACTGTAGTGACTGAATTTGTTCGCTGGAATGAGGAAGCAATATCTAGATGCACACTGTTGTTTTCTCAGCCTGCTACTGTTGCAGCTAATGTGAGATCCATATTTGCATGCTTGCTTGATCAAGTAAGCCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGA-TTGCTGTGC-AGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCGGCTCCTGCT-GCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTCTGAGGTTGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCAACCAATGCTTGCATAAGAATTGTAGCCTATCTATCTCGTGTTCTCGAGGTTGCATT-CAGTGCTCTAGAAGGTCTCAATAAACAGTCCTTTTTGACTGAGCTGGGAAAT-CGCTTGCATAAGGGGCTACTCAAT-CATTGGCAGAAGTTCACATTTAGTCCCAGTGGTGGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT-CCGGAAAGATGCCTTGCGGTTCATTCAACT-CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC-CATGTCGCC-TGTATAGCACAG-ATTCATGAT-TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTCATGATTGTATCAAACGCGACGACGCAGTTGGTAGGGTTGGTCAGTCTCTGTGCCGTACCATTCAACGATTCAAGTGTGGTTGATGCAATTCAAAAAAAA]
[+] EMBL AK064983 [ACTCGACTCGAGTCGAGAGAGACTCGTCGTCATTAGCCATCACTACTAGATCCGCCATTTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTCCGTCCGCCCCCAACCTCCCCCACCCAATTCGATCGCCTCCCCCACCCAGATCTCGCCGCCCGCCCGCCCGCCCGCCATGCCGTCGGCGACCGACCCCCCGGCGGCGCTCCCGCTAACCCTCGACCTCGACGACTTCAAGGGGGACTTCTCGTTCGACGCGCTGTTCGGGACCCTGGTGGACGAGCTGCTGCCGGAGTTCCGCGGGGACGACGCGCCCGGGGCGCCCCCGCCCCCGCCGCCCGTGCTCGGGGCCGCGCCCCCCGTCTTCCCCGCCGTCGACGAGCTTCTGGGGCTCTTCAAGCACTCATGCAAGGAGCTCGTCGATCTCCGCCGCCAGATTGACAAGAGGCTCCAGAATCTCAAGAAGGAGGTGGCCACGCAGGACGCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTTATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAAAATTGGTGATCATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGATGGAGTTCAACAGCACACCAGGGGATCTTATGGAACTTTCTCCTTTATTTTCTGATGACAGTCGTGTTGCTGAGGCAGCTTCAATTGCACAGAAATTGCGTTCATTTGCCGAGGAGGATGTTGGTAGACATGGTGTACCATCAGCTGTTGGTTCTGCTAATGCAAGTCGTGGTTTGGAGGTTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAATAGATTGTTAGCTCGGTTTGATACTGCATCACAGAGGCGGGAGATGTCTACGATGGCAGAATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATGTTGCAACACGGCCAATGTTTATTGATGTGGATATTATGAGCATTGATATTCAAGTTGTTCTTGGTGAGGAGGGGCCACAAGCTGACCACATTTGTATTGCAGAGGGCCTCTCTGTATTGTACAAGGAAATTGCAGATACTGTGAGGAGAGAAGCAACTACAATAATGGCTGTATTTCCTTCTCCAAATGAGGTCATGTCAATTCTTGTGCAGAGAGTTTTAGAACAAAGGGTAACAGCAATTCTTGATAAACTTCTTATTAAGCCCTCTCTTGCTAACTTACCTCCTATAGAAGAGGGTGGTCTTCTGCATTATCTCAGAGTTCTGGCGGTAGCATATGACAAGACAAAAGAACTTGCTAAAGAGTTGCAATCTATCAGTTGTGGGGATTTGGACATTGAAGGTCTCACTGAATCCATATTTGTTTCCCACAAAGATGAGTACACAGAATTTGAACAGGCATCACTCAGACAACAATACCAATCAAAGATGGCTGAATTGAGAGCTGAGGCCAAGCAGCAATCTGAGTCAACTGGCACAATTGGACGTTCAAATGGAGCGGCTGTGACTACATCACTTCAGCAGCAGATATCAGTTACTGTAGTGACTGAATTTGTTCGCTGGAATGAGGAAGCAATATCTAGATGCACACTGTTGTTTTCTCAGCCTGCTACTGTTGCAGCTAATGTGAGATCCATATTTGCATGCTTGCTTGATCAAGTAAGCCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGA TTGCTGTGC AGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCGGCTCCTGCT GCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTCTGAGGTTGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCAACCAATGCTTGCATAAGAATTGTAGCCTATCTATCTCGTGTTCTCGAGGTTGCATT CAGTGCTCTAGAAGGTCTCAATAAACAGTCCTTTTTGACTGAGCTGGGAAAT CGCTTGCATAAGGGGCTACTCAAT CATTGGCAGAAGTTCACATTTAGTCCCAGTGGTGGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTA ]
[+] EMBL AU173861 [ CGTCCGCCCCCAACCTCCCCCACCCAATTCGATCGCCTCCCCCACCCAGATCTCGCCGCCCGCCCGCCCGCCCGCCATGCCGTCGGCGACCGACCCCCCGGCGGCGCTCCCGCTAACCCTCGACCTCGACGACTTCAAGGGGGACTTCTCGTTCGACGCGCTGTTCGGGACCCTGGTGGACGAGCTGCTGCCGGAGTTCCGCGGGGACGACGCGCCCGGGGCGCCCCCGCCCCCGCCGCCCGTGCTCGGGGCCGCGCCCCCCGTCTTCCCCGCCGTCGACGAGCTTCTGGGGCTCTTCAAGCACTCATGCAAGGAGCTCGTCGATCTCCGCCGCCAGATTGACAAGAGGCTCCAGAATCTCAAGAAGGAGGTGGCCACGCAGGACGCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTT ]
[+] EMBL CF306617 [ CCAGATTGACAAGAGGCTCCAGAATCTCAAGAAGGAGGTGGCCACGCAGGACGCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTTATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAAAATTGGTGATCATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGATGGAGTTCAACAGCACACCAGGGGATCTTATGGAACTTTCTCCTTTATTTTCTGATGACAGTCGTGTTGCTGAGGCAGCTTCAATTGCACAGAAATTGCGTTCATTTGCCGAGGAGGATGTTGGTAGACATGGTGTACCATCAGCTGTTGGTTCTGCTAATGCAAGTCGTGGTTTGGAGGTTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAATAGATTGTTAGCTCGGTTTGATACTGCATCACAGAGGCGGGAGATGTCTACGATGGCAGAATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATG ]
[+] EMBL CB666019 [ AGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGATGGAGTTCAACAGCACACCAGGGGATCTTATGGAACTTTCTCCTTTATTTTCTGATGACAGTCGTGTTGCTGAGGCAGCTTCAATTGCACAGAAATTGCGTTCATTTGCCGAGGAGGATGTTGGTAGACATGGTGTACCATCAGCTGTTGGTTCTGCTAATGCAAGTCGAGGTTTGGAGGGTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAATAGATTGTTAGGTCGGTTTGATACTGCATCACACAGGCGGGAGATGTCTACGATGGCAGAATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATGTTGCAACACGGCCAATGTTTATTGATGTGGATATTATGAGCATTGATATTCAAGTTGTTCTTGGTGAGGAGGGGCCACAAGCTGACCACATTTGTATTGCAGAGGGCCTCTCTGTATTGTACAAGGAAATTGCAGATACTGTGAGGAGAGAAGCAACTACAATAATGGCTGTATTTCCTTCTCCAGATGAGGTCATGTCAATTCTTGTGCAGAGAGTTTTAGAACAAAGGGTAACAGCAATTCTTGATAAACTTCTTATTAAGCCCTCTCTTGCTAACTTACCTCCTATAGAAGAGGGTGGTCTTCT ]
[+] EMBL CB637387 [ GCTGTTGGTTCTGCTAATGCAAGTCGTGGTTTGGAGGTTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAATAGATTGTTAGCTCGGTTTGATACTGCATCACAGAGGCGGGAGATGTCTACGATGGCAGAATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATGTTGCAACACGGCCAATGTTTATTGATGTGGATATTATGAGCATTGATATTCAAGTTGTTCTTGGTGAGGAGGGGCCACAAGCTGACCACATTTGTATTGCAGAGGGCCTCTCTGTATTGTACAAGGAAATTGCAGATACTGTGAGGAGAGAAGCAACTACAATAATGGCTGTATTTCCTTCTCCAAATGAGGTCATGTCAATTCTTGTGCAGAGAGTTTTAGAACAAAGGGTAACAGCAATTCTTGATAAACTTCTTATTAAGCCCTCTCTTGCTAACTTACCTCCTATAGAAGAGGGTGGTCTTCTGCATTATCTCAGAGTTCTGGCGGTAGCATATGACAAGACAAAAGAACTTGCTAAAGAGTTGCAATCTATCAGTT ]
[+] EMBL AK062178 [ TGACAAGACAAAAGAACTTGCTAAAGAGTTGCAATCTATCAGTTGTGGGGATTTGGACATTGAAGGTCTCACTGAATCCATATTTGTTTCCCACAAAGATGAGTACACAGAATTTGAACAGGCATCACTCAGACAACAATACCAATCAAAGATGGCTGAATTGAGAGCTGAGGCCAAGCAGCAATCTGAGTCAACTGGCACAATTGGACGTTCAAATGGAGCGGCTGTGACTACATCACTTCAGCAGCAGATATCAGTTACTGTAGTGACTGAATTTGTTCGCTGGAATGAGGAAGCAATATCTAGATGCACACTGTTGTTTTCTCAGCCTGCTACTGTTGCAGCTAATGTGAGATCCATATTTGCATGCTTGCTTGATCAAGTAAGCCAATATTTGACTGAAGGGCTTGGCCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGA TTGCTGTGC AGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCGGCTCCTGCT GCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTCTGAGGTTGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCAACCAATGCTTGCATAAGAATTGTAGCCTATCTATCTCGTGTTCTCGAGGTTGCATT CAGTGCTCTAGAAGGTCTCAATAAACAGTCCTTTTTGACTGAGCTGGGAAAT CGCTTGCATAAGGGGCTACTCAAT CATTGGCAGAAGTTCACATTTAGTCCCAGTGGTGGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACG ]
[-] EMBL CB666020 [ GTGGGGATTTGGACATTGAAGGTCTCACTGAATCCATATTTGTTTCCCACAAAGATGAGTACACAGAATTTGAACAGGCATCACTCAGACAACAATACCAATCAAAGATGGCTGAATTGAGAGCTGAGGCCAAGCAGCAATCTGAGTCAACTGGCACAATTGGACGTTCAAATGGAGCGGCTGTGACTACATCACTTCAGCAGCAGATATCAGTTACTGTAGTGACTGAATTTGTTCGCTGGAATGAGGAAGCAATATCTAGATGCACACTGTTGTTTTCTCAGCCTGCTACTGTTGCAGCTAATGTGAGATCCATATTTGCATGCTTGCTTGATCAAGTAAGCCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGA TTGCTGTGC AGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATAATATATCTCGGCTCCTGCT GCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGATACAGTGTATTGATACCGTCATGTCTGAGGTTGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCAACCAATGCTTGCATAAGAATTGTAGCCTATCTAT ]
[+] EMBL CF336916 [ AAGCCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGA TTGCTGTGC AGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCGGCTCCTGCT GCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTCTGAGGTGGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCGACCAATGCTTGCATAAGAATTGTAGCCTATCTATCTCGTGTTCTCGAc ]
[+] EMBL CF336920 [ AAGCCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCAACGGGATAGATATGTCATTGGAACAAGTG TAGTAGAAGGGTTGCTACTGCTGCTGCTAATGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGANTTGCTGTGCNAGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCGGCTCCTGCTNGCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGTATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTCTGAGGTGGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGATGGAGCTGCACCGGATCATCGACCGACCAATGCTTGCATAAGAATTGTAGCCTATCTATCTCGTGTTCTCGACGTTG ]
[+] EMBL AU055807 [ TCTCGTGTTCTCGAGNTTGCATTCCAGTGCTCTAGAAGGTCTCAATAACCAG CCTTTTTGACTGAGCTGGNAAATCCGCTTGCATAAGGGGCTACTCAATCCATTGGCAGAAGTTCACATTTAGTCCCAGTGGTGGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTATCCCGGAAAGATGCCTTGCGGTTCATTCAACTCCAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTCATGATTGTAAAAAA ]
[-] EMBL CF317448 [ TAAACAGTCCTTTTTGACTGAGCTGGGAAAT CGCTTGCATAAGGGGCTACTCAAT CATTGGCAGAAGTTCACATTTAGTCCCAGTGGTAGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGGCGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCAaaaaaaa ]
[-] EMBL CF317452 [ TCCTTTTTGACTGAGCTGGGAAAT CGCTTGCATAAGGGGCTACTCAAT CATTGGCAGAAGTTCACATTTAGTCCCAGTGGTAGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGGCGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATCACATGTCGCCGTGTATAGCACAGAATTCATGATATATGTTAATTCTTTGGGTTTTCTTTGTTCCAaaaaaaa ]
[+] EMBL CA999547 [ ATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTCATGATTGTATC ]
[+] EMBL CB000638 [ ATCACTGAGTACGGGGAATTCGTTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTCATGATTGTATCACGCGCGACGACGCAGTTGGTAGGGTTGGTCAGTCTCTGTGCCGTACCATTCAACGATTCAAGTGTGGTTGATGCAATTCAAAAAAAA]
[-] EMBL CB637388 [ TTCGTAGCTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATTCATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTAT CCGGAAAGATGCCTTGCGGTTCATTCAACT CAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCTAAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCACACTTTTTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGT ]
[+] EMBL CA998744 [ GAGCCGCATTCACACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATTTTGACCATC CATGTCGCC TGTATAGCACAG ATTCATGAT TATGTTAATTCTTTGGGTTTTCTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAGTCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTCATGATTG ]
consensusID : consensus_14630#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 240 fasta sequence
[TGGCGCGAAGCTACCGTGTGCCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTTATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAAAATTGGTGATTATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGAT]
[+] EMBL CF307211 [TGGCGCGAAGCTACCGTGTGCCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTTATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAAAATTGGTGATTATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGATCTCATCAAGTATCTGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14630#0 ACTCGACTCGAGTCGAGAGAGACTCGTCGTCATTAGCCATCACTACTAGATCCGCCATTT 60
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 CTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTCCGTCCGCCCCCAACC 120
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TCCCCCACCCAATTCGATCGCCTCCCCCACCCAGATCTCGCCGCCCGCCCGCCCGCCCGC 180
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 CATGCCGTCGGCGACCGACCCCCCGGCGGCGCTCCCGCTAACCCTCGACCTCGACGACTT 240
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 CAAGGGGGACTTCTCGTTCGACGCGCTGTTCGGGACCCTGGTGGACGAGCTGCTGCCGGA 300
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 GTTCCGCGGGGACGACGCGCCCGGGGCGCCCCCGCCCCCGCCGCCCGTGCTCGGGGCCGC 360
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 GCCCCCCGTCTTCCCCGCCGTCGACGAGCTTCTGGGGCTCTTCAAGCACTCATGCAAGGA 420
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 GCTCGTCGATCTCCGCCGCCAGATTGACAAGAGGCTCCAGAATCTCAAGAAGGAGGTGGC 480
consensus_14630#1 -------------TGGCGCGAAGCTACCGTGTG---CCGGATTATGAC--TGAACGCCTC 42
* *** * * * * * ** ** * * * * * * *
consensus_14630#0 CACGCAGGACGCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTT 540
consensus_14630#1 TAAGTCAGAATCCAAGCATCGCAAGACGCTCGGGGAGCTTGAGAAAGGTGTGGATGGTTT 102
* * ** *************************************************
consensus_14630#0 ATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAA 600
consensus_14630#1 ATTTGATAGCTTTGCTAGGTTGGATTCCCGTATTTCTAGTGTTGGCCAAACAGCTGCCAA 162
************************************************************
consensus_14630#0 AATTGGTGATCATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGA 660
consensus_14630#1 AATTGGTGATTATTTACAGAGTGCAGAATCCCAGAGGGAAACTGCTAGTCAGACAATAGA 222
********** *************************************************
consensus_14630#0 TCTCATCAAGTATCTGATGGAGTTCAACAGCACACCAGGGGATCTTATGGAACTTTCTCC 720
consensus_14630#1 TCTCATCAAGTATCTGAT------------------------------------------ 240
******************
consensus_14630#0 TTTATTTTCTGATGACAGTCGTGTTGCTGAGGCAGCTTCAATTGCACAGAAATTGCGTTC 780
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 ATTTGCCGAGGAGGATGTTGGTAGACATGGTGTACCATCAGCTGTTGGTTCTGCTAATGC 840
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 AAGTCGTGGTTTGGAGGTTGCTGTTGCAAATCTTCAAGAGTATTGTAATGAATTGGAGAA 900
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TAGATTGTTAGCTCGGTTTGATACTGCATCACAGAGGCGGGAGATGTCTACGATGGCAGA 960
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 ATGTGCTAAAATTTTGTCACAGTTCAACCGCGGAACCAGTGCTATGCAACATTATGTTGC 1020
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 AACACGGCCAATGTTTATTGATGTGGATATTATGAGCATTGATATTCAAGTTGTTCTTGG 1080
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TGAGGAGGGGCCACAAGCTGACCACATTTGTATTGCAGAGGGCCTCTCTGTATTGTACAA 1140
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 GGAAATTGCAGATACTGTGAGGAGAGAAGCAACTACAATAATGGCTGTATTTCCTTCTCC 1200
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 AAATGAGGTCATGTCAATTCTTGTGCAGAGAGTTTTAGAACAAAGGGTAACAGCAATTCT 1260
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TGATAAACTTCTTATTAAGCCCTCTCTTGCTAACTTACCTCCTATAGAAGAGGGTGGTCT 1320
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TCTGCATTATCTCAGAGTTCTGGCGGTAGCATATGACAAGACAAAAGAACTTGCTAAAGA 1380
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 GTTGCAATCTATCAGTTGTGGGGATTTGGACATTGAAGGTCTCACTGAATCCATATTTGT 1440
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TTCCCACAAAGATGAGTACACAGAATTTGAACAGGCATCACTCAGACAACAATACCAATC 1500
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 AAAGATGGCTGAATTGAGAGCTGAGGCCAAGCAGCAATCTGAGTCAACTGGCACAATTGG 1560
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 ACGTTCAAATGGAGCGGCTGTGACTACATCACTTCAGCAGCAGATATCAGTTACTGTAGT 1620
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 GACTGAATTTGTTCGCTGGAATGAGGAAGCAATATCTAGATGCACACTGTTGTTTTCTCA 1680
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 GCCTGCTACTGTTGCAGCTAATGTGAGATCCATATTTGCATGCTTGCTTGATCAAGTAAG 1740
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 CCAATATTTGACTGAAGGGCTTGACCATGCTAGAGAGAGTTTAAATCATGCAGCAACTCA 1800
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 ACGGGATAGATATGTCATTGGAACAAGTGTTAGTAGAAGGGTTGCTACTGCTGCTGCTAA 1860
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TGCTGCAGAGGCGGCAGCTGCTGCAGGTGAGAGTAGCTTTAGATCCTTCATGATTGCTGT 1920
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 GCAGCGTTGTGCTAGCAGTGTGGCTATTCTTCAGCAGTACTTCTCAAATACTATATCTCG 1980
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 GCTCCTGCTGCCTGTGGATGGTGCCCACCCCTCAGCTTGTGAAGATATGGGATCAGCAGT 2040
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 ATCTGTTGTTGAGGCTGCTGCCCACAAAGGACTGCTACAGTGTATTGATACCGTCATGTC 2100
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TGAGGTTGAAAGATTGCTGTCTTCAGAACAGAAGGCTACAGATTATCGAACACCAGATGA 2160
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TGGAGCTGCACCGGATCATCGACCAACCAATGCTTGCATAAGAATTGTAGCCTATCTATC 2220
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TCGTGTTCTCGAGGTTGCATTCAGTGCTCTAGAAGGTCTCAATAAACAGTCCTTTTTGAC 2280
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TGAGCTGGGAAATCGCTTGCATAAGGGGCTACTCAATCATTGGCAGAAGTTCACATTTAG 2340
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TCCCAGTGGTGGGTTACGGCTGAAACGTGATATCACTGAGTACGGGGAATTCGTTCGTAG 2400
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 CTTCAATGCCCCATCGATAGATGAAAAGTTTGAACTGCTTGGAATCATGGCCAATGTATT 2460
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 CATCGTTGCTCCTGAAAGTCTAGCTTCCTTATTTGAAGGAACCCCCAGTATCCGGAAAGA 2520
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TGCCTTGCGGTTCATTCAACTCAGGGACGACTATAAGACAGCAAAAATCGCTTCCATGCT 2580
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 AAACAGTATCATGGCTGAATAGTGTCACGTCAAGAAGCAGTATGTTTGAGCCGCATTCAC 2640
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 ACTTTCTGCTGCCTATCAAACTTCAAGTCTATGAAATGATTCAGTGCCCTCCAAATGATT 2700
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TTGACCATCCATGTCGCCTGTATAGCACAGATTCATGATTATGTTAATTCTTTGGGTTTT 2760
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 CTTTGTTCCATTTTTTTTCCCTATCCTATTTTGGGCTTGCATTTGTACATGCTGTATCAG 2820
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TCTCTCTAAATATGACCATTGTACCAAGTGGCATAAGTAGTATTTAACGTTCAGTTGTTC 2880
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 ATGATTGTATCAAACGCGACGACGCAGTTGGTAGGGTTGGTCAGTCTCTGTGCCGTACCA 2940
consensus_14630#1 ------------------------------------------------------------
consensus_14630#0 TTCAACGATTCAAGTGTGGTTGATGCAATTCAAAAAAAA 2979
consensus_14630#1 ---------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||