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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14808#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1729 fasta sequence
[GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT-GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT-GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG-AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT-CCTATCTTGCCTTGCATTGGCAT-CCAT-CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA-T-TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTAT-TAAAAAAAAAAAAAAAAAAATGTGCTGTTGCTGTTGCTATAAAATGTTGTGGAGAGCTGTGAACATGTCTGTCGTGAGTGACGATGATATTTTTTGCGAGTACCAAAGCGTAGTGCTGCTGCTGCTTTGCAGTTTGCGCAGAGCCTCTCTCTGGGCATGTTGTGGTTCAGTGCTCTCTCTGGGCATCATGTACCATCCAGTCAAGTATTCATGTACAGTAGCAATAACAGTATATGTATACATGTGTTCAT]
[+] EMBL AK069526 [GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGCGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCT ]
[+] EMBL CB681876 [GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCA ]
[-] EMBL CB643218 [ ATCCCTTCTTTCAGCCATGCTTTTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA ]
[-] EMBL CB631837 [ TCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCTTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACGACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA ]
[-] EMBL CB631881 [ ACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCTTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACGACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA ]
[-] EMBL CB662473 [ ACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCTCCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA ]
[-] EMBL CB646494 [ taAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGTGGGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA ]
[+] EMBL AA754573 [ ttnTTCTTGTCAGGCTCCAGAGGGTAACCATNAACTGACNCCNGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGA CAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGANAANCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCNTNTTGGANCCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACCATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCNACAG ]
[+] EMBL AU057460 [ cnTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATNGCGGAGAAGCTGTCTCAGCTGACAGTNGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACNCCNNCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACNACGATGAAACGGAAGCTGCCGCCACACNCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCGAAAGA TTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAA ]
[-] EMBL CB683800 [ GCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGTATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAAAGGAATAATAATAATAAATATATACTATTGCTATCTAAAAAga ]
[-] EMBL CA761639 [ ACCCCTTTCGGGGGCCATTAGAGATTCCAGGGGACAGGGCTTTCCTTCCCANGGAGCTTGTTAGCTGAAGNCGCNGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCGTACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTAACTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCCTGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGTTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTTT TAAAAAAAAAAAAAAA ]
[+] EMBL C98540 [ GCTACCCTTTCACCAATCCTCCTACTATCCTGGAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTCCCTAGTAGTGTCGTATTGGTTGTGAATCTCATNCCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACN CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA TNTAC CTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTAT TAAAAAAA ]
[-] EMBL CB681877 [ GCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTAT TATTACTGTATCTTATAAAATGTGCTGTTGCTGTTGCTATAAAATGTTGTGGAGAGCTGTGAACATGTCTGTCGTGAGTGACGATGATATTTTTTGCGAGTACCAAAGCGTAGTGCTGCTGCTGCTTTGCAGTTTGCGCAGAGCCTCTCTCTGGGCATGTTGTGGTTCAGTGCTCTCTCTGGGCATCATGTACCATCCAGTCAAGTATTCATGTACAGTAGCAATAACAGTATATGTATACATGTGTTCAT]
[+] EMBL BE228845 [ G AAGA TTTTTAGTGCTGTTTCCTAGTAATGTCGTATTGGTTGTGAATCTCATACCCCNATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAANCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGANTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACNCTTGTTGANTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCNAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCANTTGTTTATGCACCATGCANGCATGCATGANTGCATGAACAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTA TGCTA ]
[+] EMBL AU057461 [ GTGTCGTATTGGTTGTGAATATCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACTCCCTATCTTGCCTTGCATTGGCATCCCATCCCATGACAGCACCTCGNGGATGCNGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTNGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTANN TAC CTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTNT TAAAAAAA ]
[+] EMBL OSC101131 [ TATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGNCTA T TACCACTACGT GTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGNGGCTGCAGCAATCAAATAATAATAATAAATATA ]
[+] EMBL AU082587 [ CTCGAGGATGCAGCTNATCCTCGGGGGCATGCAAGCATGNCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TNAC CTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTA AAAAAAAAAAA ]
consensusID : consensus_14808#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 631 fasta sequence
[GCTCGTGCCGAATTCGGCACGAGCGACTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAANGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGANCTGTGGATCAGAAAAATGCTANGANATATTCCGTGGGGCCCTTATCTNATGGGAGACAGCCGTTAATTACTCATACTTGANCGCTAACACCCCGGCAAGANCAGCTGGTGTGCAAAGGAACTGGANTTGGATCACCAAGTGAATATGAATTCTTGTCAGCTCCANAAGGTTACCATNAACTGACCAANGCAGAAGCCATGAACACCTTGGTCCANAACACACCACAGCANCANCANTTAGGANCAATGGAAATTACT]
[+] EMBL BE229728 [GCTCGTGCCGAATTCGGCACGAGCGACTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAANGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGANCTGTGGATCAGAAAAATGCTANGANATATTCCGTGGGGCCCTTATCTNATGGGAGACAGCCGTTAATTACTCATACTTGANCGCTAACACCCCGGCAAGANCAGCTGGTGTGCAAAGGAACTGGANTTGGATCACCAAGTGAATATGAATTCTTGTCAGCTCCANAAGGTTACCATNAACTGACCAANGCAGAAGCCATGAACACCTTGGTCCANAACACACCACAGCANCANCANTTAGGANCAATGGAAATTACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14808#0 GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAA 60
consensus_14808#1 ---------------GCTCGTGCCGAATTCGGCACGAGCGACTCTTTTCCCTGGTTCAAA 45
*** * * ** *** *******************
consensus_14808#0 TGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTG 120
consensus_14808#1 TGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTG 105
************************************************************
consensus_14808#0 GGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCAT 180
consensus_14808#1 GGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCAT 165
************************************************************
consensus_14808#0 ACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCT 240
consensus_14808#1 ACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCT 225
************************************************************
consensus_14808#0 CTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTT 300
consensus_14808#1 CTGCTCATGGGACCCACAAAGAANGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTT 285
*********************** ************************************
consensus_14808#0 TCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGC 360
consensus_14808#1 TCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGC 345
************************************************************
consensus_14808#0 AACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTC 420
consensus_14808#1 AACACCACCATCAGTTGGGGCTAAAGGANCTGTGGATCAGAAAAATGCTANGANATATTC 405
**************************** ************* ******* ** ******
consensus_14808#0 CGTGGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACAC 480
consensus_14808#1 CGTGGGGCCCTTATCTNATGGGAGAC-AGCCGTTAATTACTCATACTTGANCGCTAACAC 464
**************** ********* *********************** *********
consensus_14808#0 CCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAA 540
consensus_14808#1 CCCGGCAAGANCAGCTGGTGTGCAAAGGAA-CTGGANTTGGATCACCAAGTGAATATGAA 523
********** ******************* ***** *********** ***********
consensus_14808#0 TTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCC 600
consensus_14808#1 TTCTTGTCAG-CTCCANAAGGTTACCATNAACTGACCAANGCAGAAGCCATGAAC--ACC 580
********** ***** * *** ***** ******* ** ***** ** ***** **
consensus_14808#0 TTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAA 660
consensus_14808#1 TTGGTCCANAACAC-ACCA-CAGCANCANCANTTAGGANCAATGGAAATTACT------- 631
******** * *** **** ***** ** ** * **** **************
consensus_14808#0 AGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTC 720
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 CAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGG 780
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 GAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGA 840
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 CCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGT 900
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 TAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCAC 960
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 CAATCCTCCTACTATCCTGAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCGAAGAGTT 1020
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 TTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATG 1080
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 GAGATGTGCCAGCCTGCTGGTACTCCTATCTTGCCTTGCATTGGCATCCATCCATGACAG 1140
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 CACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATG 1200
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 GAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTG 1260
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 TTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGT 1320
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 ACTACTACTACTATGTCAAATATTGTTATAGGACTATTACCACTACGTGGTGCGGCTATG 1380
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 CTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCA 1440
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 GCAATCAAATAATAATAATAAATATATACTATTGCTATTAAAAAAAAAAAAAAAAAAATG 1500
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 TGCTGTTGCTGTTGCTATAAAATGTTGTGGAGAGCTGTGAACATGTCTGTCGTGAGTGAC 1560
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 GATGATATTTTTTGCGAGTACCAAAGCGTAGTGCTGCTGCTGCTTTGCAGTTTGCGCAGA 1620
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 GCCTCTCTCTGGGCATGTTGTGGTTCAGTGCTCTCTCTGGGCATCATGTACCATCCAGTC 1680
consensus_14808#1 ------------------------------------------------------------
consensus_14808#0 AAGTATTCATGTACAGTAGCAATAACAGTATATGTATACATGTGTTCAT 1729
consensus_14808#1 -------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||