cluster # 15550

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Oryza sativa
cluster # 15550 cluster # 15550 Sequences # 22 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15550#0 length = 1103 sequences # 12
consensus_15550#1 length = 789 sequences # 1
consensus_15550#2 length = 744 sequences # 5

consensus_15550#3 length = 479 sequences # 1
consensus_15550#4 length = 367 sequences # 2
consensus_15550#5 length = 247 sequences # 1

consensusID : consensus_15550#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1103
fasta sequence

                              [CATCCCGGCCGATCGAGCTAGCAAATATCAAAAAGCAGCTCCAGCTTCTTCTGATCGATCGATCGAGCTGAGCTATAGGCAGTAGCTGCTAATTAAGCTAATTAATTGCTAAGCAGTAGTAGAGCTAGCTAATTAATTAAGATGGCCGGCAAGAAGGTGCAGG-TTTGTG-CGCT-GTT-CCTTGCCCTC-AATGTGCTC-TTCA-CCATGCAGATGGGTGCAGTAGTGCAGGCATGCGAGCCCTACTGCCCCACACCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGGGAATAAGTGCCCG-ATCG-ACGCGCTGAAGCTGAGCGTGTGCGCCAACGTGCTCAACCTGCTGAAGCTGAAGATCGGCGTGCCGGAGAGCGAGCAGTGC-TGCCCGTTGCTGGGTGGCCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACATCCTCGGCATCAATCTCAACATCCCCGTCGATCTCTCTCTCCTTCTCAACTACTGCCACAAGACCTGCCCCTCCGACTTCACCTGCCCTCTCTAAATTAATCGATCCTCCGATCCCTTAATTACCATACCATTACACCATGCATCAATATCCATATATATATAAACCCTTTCGCACGTACTTATACTATGTTTTGTCATACATATATATGTGTCGAACGATCGATCTATCACTGATATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGTATACCGTCAAATAAAAGTTTCTTCCACTTGTGTTAAAAAAAAAAAAAAAAAAAAACCCCCGGAAATGTTATTCGTTGGGATGATTGTCAACCAATTTTGTTTTTCTTCCCTCGGGGGGGGCCGGGCCCCATTCCCCTTATGTGGGTGTTTCCCCCCTCCTGGCCGTTTTTAAAATCTGACTGGAAACCCTGGTTCCCATTTATCCTTTAACATGCCTCTTTTCGTTGGTTATTGCAGAGGCCCACCGCCCCTTCCAAATGCCAACCAAGGAAGGGACCGCCTTGGGGCTATAGCCGGGTTGGGGTCGCGTGACTTCTTTCGGCCACCCCCTGTTATTTGCCTTATCCCTGGAGTCCC]

[+] EMBL CF290928             [CATCCCGGCCGATCGAGCTAGCAAATATCAAAAAGCAGCTCCAGCTTCTTCTGATCGATCGATCGAGCTGAGCTATAGGCAGTAGCTGCTAATTAAGCTAATTAATTGCTAAGCAGTAGTAGAGCTAGCTAATTAATTAAGATGGCCGGCAAGAAGGTGCAGG TTTGTG CGCT GTT CCTTGCCCTC AATGTGCTC TTCA CCATGCAGATGGGTGCAGTAGTGCAGGCATGCGAGCCCTACTGCCCCACACCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGGGAATAAGTGCCCG ATCG ACGCGCTGAAGCTGAGCGTGTGCGCCAACGTGCTCAACCTGCTGAAGCTGAAGATCGGCGTGCCGGAGAGCGAGCAGTGC TGCCCGTTGCTGGGTGGCCTCGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF291056             [       GCCGATCGAGCTAGCAAATATCAAAAAGCAGCTCCAGCTTCTTCTGATCGATCGATCGAGCTGAGCTATAGGCAGTAGCTGCTAATTAAGCTAATTAATTGCTAAGCAGTAGTAGAGCTAGCTAATTAATTAAGATGGCCGGCAAGAAGGTGCAGG TTTGTG CGCT GTT CCTTGCCCTC AATGTGCTC TTCA CCATGCAGATGGGTGCAGTAGTGCAGGTATGCGAGCCCTACTGCCCCACACCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGGGAATAAGTGCCCG ATCG ACGCGCTGAAGCTGAGCGTGTGCGCCAACGTGCTCAACCTGCTGAAGCTGAAGATCGGCGTGCCGGAGAGCGAGCAGTGC TGCCCGTTGCTGGGTGGCCTCGTCGACCTC ACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACATCCTCGGCATCAATCTCAACATCCCCGTCGATCTCTCTCTCCTTCTCAACTACTGCCACAAGACCTGCCCCTCCGACTTCACCTGCCCTCTCTAAATTAATCGATCCTCCGATCCCTTAATTACCATACCATTACACCATGCATCAATATCCATATATATATAAACCCTTTCGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK103618             [         CGATCGAGCTAGCAAATATCAAAAAGCAGCTCCAGCTTCTTCTGATCGATCGATCGAGCTGAGCTATAGGCAGTAGCTGCTAATTAAGCTAATTAATTGCTAAGCAGTAGTAGAGCTAGCTAATTAATTAAGATGGCCGGCAAGAAGGTGCAGG TTTGTG CGCT GTT CCTTGCCCTC AATGTGCTC TTCA CCATGCAGATGGGTGCAGTAGTGCAGGCATGCGAGCCCTACTGCCCCACACCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGGGAATAAGTGCCCG ATCG ACGCGCTGAAGCTGAGCGTGTGCGCCAACGTGCTCAACCTGCTGAAGCTGAAGATCGGCGTGCCGGAGAGCGAGCAGTGC TGCCCGTTGCTGGGTGGCCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACATCCTCGGCATCAATCTCAACATCCCCGTCGATCTCTCTCTCCTTCTCAACTACTGCCACAAGACCTGCCCCTCCGACTTCACCTGCCCTCTCTAAATTAATCGATCCTCCGATCCCTTAATTACCATACCATTACACCATGCATCAATATCCATATATATATAAACCCTTTCGCACGTACTTATACTATGTTTTGTCATACATATATATGTGTCGAACGATCGATCTATCACTGATATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGTATACCGTCAAATAAAAGTTTCTTC                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF291694             [         CGATCGAGCTAGCAAATATCAAAAAGCAGCTCCAGCTTCTTCTGATCGATCGATCGAGCTGAGCTATAGGCAGTAGCTGCTAATTAAGCTAATTAATTGCTAAGCAGTAGTAGAGCTAGCTAATTAATTAAGATGGCCGGCAAGAAGGTGCAGG TTTGTG CGCT GTT CCTTGCCCTC AATGTGCTC TTCA CCATGCAGATGGGTGCAGTAGTGCAGGCATGCGAGCCCTACTGCCCCACACCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGT GGGTGGA GGAATAA TGCCCG ATCG ACGC CT AA CTGA   TG GTGCCCACG GCT AA CTG TGAAGCTGAA ATCGG GTGCCGGA A CGAGCAG GC TGCCCG TG TGGGTGGCCTCGTC ACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACATCCTCGGCATCAATCTCAACATCCCCGTCGATCTCTCTCTCCTTCTCAACTACTGCCACAAGACCTGCCCCTCCGACTTCACCTGCCCTCTCTAAATTAATCGATCCTCCGATCCCTTAATTACCATACCATTACACCATGCATCAATATCCATATATATATAAACCCTTTCGCACGTACTTATACTATGTTTTGTCATACATATATATGTGTCGAACGATCG                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSR06222A            [                GCTAGCAAATATCAAAAAGCAGCTCCAGCTTCTTCTGATCGATCGATCGAGCTGAGCTATAGGCAGTAGCTGCTAATTAAGCTAATTAATTGCTAAGCAGTAGTAGAGCTAGCTAATTAATTAAGATGGCCGGCAAGAAGGTGCAGG TTTGTG CGCT GTT CCTTGCCCTC AATGTGCTC TTCA CCATGCAGATGGGTGCAGTAGTACAGGCATGCGAGCCCTACTGCCCCACACCGACGCCGCCGGTGACGNCGCCTCCGTCGCCGGCGTCGGGTGGAGGGANTAAGTNCCCGAATCG ACGNGCTGAAGCTGAGCGTGTtc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL OSS2860A             [                       AATATCAAAAAGCAGCTCCAGCTTCTTCTGATCGATCGATCGAGCTGAGCTATAGGCAGTAGCTGCTAATTAAGCTAATTAATTGCTAAGCAGTAGTAGAGCTAGCTAATTAATTAAGATGGCCGGCAAGAAGGTGCAGG TTTGTG CGCT GTT CCTTGCCCTC AATGTGCTC TTCA CCATGCAGATGGGTGCAGTAGTNCAGGCATGCGAGCCCTACTGCCCCACACCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGGGAATAAGTNCCCG ATCG ACGCGCTGAAGCTGAGCGTGTTCGCCAACGTGCTCAACCTGCTGAAGCTGAAGATCGGCGTTCCGGAGAGCGAGCAGTTCTTGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA755383             [                               AAAGCAGCTCCAGCTTCTTCTGATCGATCGATCGAGCTGAGCTATAGGCAGTAGCTGCTAATTAAGCTAATTAATTGCTAAGCAGTAGTAGAGCTAGCTAATTAATTAAGATGGCCGGCAAGAAGGTGCAGG TTTGTG CGCT GTT CCTTGCCCTC AATGTGCTC TTCA CCATGCAGATGGGTGCAGTAGTGCAGGCATGCGAGCCCTACTGCCCCACACCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGGGAATAAGTGCCCG ATCG ACGCGCTGAAGCTGAGCGTGTGCGCCAACGTGCTCAACCTGCTGAAGCTGAAGATCGGCGTGCCGGAGAGCGAGCAGTGC TGCCCGTTGCTGGGTGGCCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACATCCTCGGCATCAATCTCAACATCCCCGTCGATCTCTCTCTCCTTCTCAACTACTGCCACAAGACCTGCCCCTCCGACTTCACCTGCCCTCTCTAAATTAATCGATCCTCCGATCCCTTAATTACCATACCATTACACCATGCATCAATATCCATATATATATAAACCCTTTCGCACGTACTTATACTATGTTTTGTCATACATATATATGTGTCGAACGATCGATCTATCACTGATATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGTATACCGTCAAATAAAAGTTTCTTCCACTTGTGTTAATAAAAAAAA                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU082154             [                                                                                                                                                                AGGTTTTGTGCCNCTGGTTCCCTTGCCCNCAAATGTGTTCTTTNACCCATGCAGATGGGTNCAGTAGTGCAGGCATGCGAGNCCTACTGCCCCACACNGACGCCGCCGGTNACGCCGCCTCCGTCGCCNCCGTCGGGTGGAGGGAATAAGTGCCCG ATCGNACGCGCTGAAGCTGAGCGTGTGCGCCAACGTGCTCAACCTGCTGAAGCTNAAGATCGGCGTGCCGGAGAGCGAGCAGTGC TGCCCGTTGCTGGGTGGCCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACATCCTCGGCATCAATCTCAACATCCCCGTCGATCTCTCTCTCCTTCTCAACTACTGCCACAAGACCTGCCCCTCCGACTTCACCTGCCCTCTCTAAATTAATCGATCCTCCGATCCCTTAATTACCATACCATTACACCATGCATCAATATCCATATATATATAAACCCTTTCGCACGTACTTATACTATGTTTTGTCATACATATATATGTGTCGAACGATCGATCTATCACTGATATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGTATACCGTCAAATAAAAGTTTCTTCCACTTGTGTTAAAAAA                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BE040683             [                                                                                                                                                                                  T CGTTGCTCTG AATATGGTC ATCT CCATGCAGATGGGTGCAGTAGTGCAGGCATGCGAGCCCTACTGCCCCACACCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGGGAATAAGTGCCCG ATCG ACGCGCTGAAGCTGAGCGTGTGCGCCAACGTGCTCAACCTGCTGAAGCTGAAGATCGGCGTGCCGGAGAGCGAGCAGTGC TGCCCGTTGCTGGGTGGCCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACATCCTCGGCATCAATCTCAACATCCCCGTCGATCTCTCTCTCCTTCTCAACTACTGCCACAAGACCTGCCCCTCCGACTTCACCTGCCCTCTCTAAATTAATCGATCCTCCGATCCCTTAATTACCATACCATTACACCATGCATCAATATCCATATATATATAAACCCTTTCGCACGTACTTATACTATGTTTTGTCATACATATATATGTGTCGAACGATCGATCTATCACTGATATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGTATACCGGCAAATAAAAGTTTCTTCCACTTGTGTTGAAAAAAAAAAAAAAAAAAAACCCCCGGAAATGTTATTCGTTGGGATGATTGTCAACCAATTTTGTTTTTCTTCCCTCGGGGGGGGCCGGGCCCCATTCCCCTTATGTGGGTGTTTCCCCCCTCCTGGCCGTTTTTAAAATCTGACTGGAAACCCTGGTTCCCATTTATCCTTTAACATGCCTCTTTTCGTTGGTTATTGCAGAGGCCCACCGCCCCTTCCAAATGCCAACCAAGGAAGGGACCGCCTTGGGGCTATAGCCGGGTTGGGGTCGCGTGACTTCTTTCGGCCACCCCCTGTTATTTGCCTTATCCCTGGAGTCCC]
[-] EMBL CF291057             [                                                                                                                                                                                                                                                                                                                             ATCG ACGCGCTGAAGCTGAGCGTGTGCGCCAACGTGCTCAACCTGCTGAAGCTGAAGATCGGCGTGCCGGAGAGCGAGCAGTGC TGCCCGTTGCTGGGTGGCCTCGTCGACCTCGACGCCGCCGTTTGCCTTTGCACCGCCATCAAGGCCAACATCCTCGGCATCAATCTCAACATCCCCGTCGATCTCTCTCTCCTTTTCAACTACTGCCACAAGACCTGCCCCTCCGACTTCACCTGCCCTCTTTAAATTAATCGATCCTCCGATCCCTTAATTACCATACCATTACACCATGCATCAATATCCATATATATATAAACCCTTTCGCACGTACTTATACTATGTTTTGTCATACATATATATGTGTCGAACGATCGATCTATCACTGATATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGTATACCGTCAAATAAAAGTTTTTTCCACTTGTGTTAAAAAAAAAAAAAA                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF290927             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCTCAACTACTGCCACAAGACCTGCCCCTCCGACTTCACCTGCCCTCTTTAAATTAATCGATCCTCCGATCCCTTAATTACCATACCATTACACCATGCATCAATATCCATATATATATAAACCCTTTCGCACGTACTTATACTATGTTTTGTCATACATATATATGTGTCGAACGATCGATCTATCACTGATATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGTATACCGTCAAATAAAAGTTTCTTCCGCTTGTGTTAATAAAAAAA                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU165091             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCATGCATCAATATCCATATATATATAAACCCTTTCGCACGTACTTATACTATGTTTTGTCATACATATATATGTGTCGAACGATCGATCTATCACTGATATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGCATACCGTCAAATAAAAGTTTCTTCCACTTGTGTTAAAAA                                                                                                                                                                                                                                                                                                                              ]




>consensus_15550#0
CATCCCGGCCGATCGAGCTAGCAAATATCAAAAAGCAGCTCCAGCTTCTTCTGATCGATC
GATCGAGCTGAGCTATAGGCAGTAGCTGCTAATTAAGCTAATTAATTGCTAAGCAGTAGT
AGAGCTAGCTAATTAATTAAGATGGCCGGCAAGAAGGTGCAGGTTTGTGCGCTGTTCCTT
GCCCTCAATGTGCTCTTCACCATGCAGATGGGTGCAGTAGTGCAGGCATGCGAGCCCTAC
TGCCCCACACCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGGGAAT
AAGTGCCCGATCGACGCGCTGAAGCTGAGCGTGTGCGCCAACGTGCTCAACCTGCTGAAG
CTGAAGATCGGCGTGCCGGAGAGCGAGCAGTGCTGCCCGTTGCTGGGTGGCCTCGTCGAC
CTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACATCCTCGGCATCAATCTC
AACATCCCCGTCGATCTCTCTCTCCTTCTCAACTACTGCCACAAGACCTGCCCCTCCGAC
TTCACCTGCCCTCTCTAAATTAATCGATCCTCCGATCCCTTAATTACCATACCATTACAC
CATGCATCAATATCCATATATATATAAACCCTTTCGCACGTACTTATACTATGTTTTGTC
ATACATATATATGTGTCGAACGATCGATCTATCACTGATATGATATGATTGATCCATCAG
CCTGATCTCTGTATCTTGTTATTTGTATACCGTCAAATAAAAGTTTCTTCCACTTGTGTT
AAAAAAAAAAAAAAAAAAAAACCCCCGGAAATGTTATTCGTTGGGATGATTGTCAACCAA
TTTTGTTTTTCTTCCCTCGGGGGGGGCCGGGCCCCATTCCCCTTATGTGGGTGTTTCCCC
CCTCCTGGCCGTTTTTAAAATCTGACTGGAAACCCTGGTTCCCATTTATCCTTTAACATG
CCTCTTTTCGTTGGTTATTGCAGAGGCCCACCGCCCCTTCCAAATGCCAACCAAGGAAGG
GACCGCCTTGGGGCTATAGCCGGGTTGGGGTCGCGTGACTTCTTTCGGCCACCCCCTGTT
ATTTGCCTTATCCCTGGAGTCCC

consensusID : consensus_15550#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 789
fasta sequence

                              [CCGCCTCCGTCGCCGCCGTCTGGTGGAGCGAATAAGTGCCCGATCGACGCGCTGAAGCTGGGCGTGTGCGCCAACGTGCTCAACCTGCTCAAGCTCAAGGTGGGGGTGCCGGCGAGCGAGGAGTGCTGCCCGCTGCTGGGGGGGCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGTCATCAAGGCCAACGTCCTCGGCATCAACATCAACGTCCCCGTCGACCTCATGCTGCTCCTTAACTACTGTCACAAGACCTGCCCTTCCGACTTCTTCTGCCCACTCATTTGATTCTTAATCTTTATTACCACCACAACCCTAGCTACCTAATTAAGGCTTAAGCTTCGCATGGTTTATTCTGTGTGTTGCTCGCGTGTATACGTTTGTACTTATCTTTTATCTTTCGTCGTTATTACGGTTGACCTATTTTTGTCCTTTTATTTCTGTCTCTGAATCTCTTGGTCGCTGTCCCTGTGTTATTATTTTGTCGCCCTCGCTCTCCTGCTTCTTTTTTCTCTCTGCTCCCCCATTTTTTTTTTTCTCTTGTCCCTTTGGTTGTCCTCCCCATCCTGTTGCTGAGTTTCTGTGGCGGTTTTTTCTGTTTCCTTTCTGGTCCTCGCGGGTCTTAGGACTCTTCCTCGGTATTGTTGTTCGTTCTCCCACCCGCTTAATGCGTTTTTTCTTTTTCTCTCATACTTCATGCCACTACTTTTCCTTTTTTGTATTGGCTTAGGCGTCGGAGTCGTTGTATTCCTTCCCGGTAACTTCTATTTTAAGTTTTCAAAT]

[+] EMBL BE041032             [CCGCCTCCGTCGCCGCCGTCTGGTGGAGCGAATAAGTGCCCGATCGACGCGCTGAAGCTGGGCGTGTGCGCCAACGTGCTCAACCTGCTCAAGCTCAAGGTGGGGGTGCCGGCGAGCGAGGAGTGCTGCCCGCTGCTGGGGGGGCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGTCATCAAGGCCAACGTCCTCGGCATCAACATCAACGTCCCCGTCGACCTCATGCTGCTCCTTAACTACTGTCACAAGACCTGCCCTTCCGACTTCTTCTGCCCACTCATTTGATTCTTAATCTTTATTACCACCACAACCCTAGCTACCTAATTAAGGCTTAAGCTTCGCATGGTTTATTCTGTGTGTTGCTCGCGTGTATACGTTTGTACTTATCTTTTATCTTTCGTCGTTATTACGGTTGACCTATTTTTGTCCTTTTATTTCTGTCTCTGAATCTCTTGGTCGCTGTCCCTGTGTTATTATTTTGTCGCCCTCGCTCTCCTGCTTCTTTTTTCTCTCTGCTCCCCCATTTTTTTTTTTCTCTTGTCCCTTTGGTTGTCCTCCCCATCCTGTTGCTGAGTTTCTGTGGCGGTTTTTTCTGTTTCCTTTCTGGTCCTCGCGGGTCTTAGGACTCTTCCTCGGTATTGTTGTTCGTTCTCCCACCCGCTTAATGCGTTTTTTCTTTTTCTCTCATACTTCATGCCACTACTTTTCCTTTTTTGTATTGGCTTAGGCGTCGGAGTCGTTGTATTCCTTCCCGGTAACTTCTATTTTAAGTTTTCAAAT]




>consensus_15550#1
CCGCCTCCGTCGCCGCCGTCTGGTGGAGCGAATAAGTGCCCGATCGACGCGCTGAAGCTG
GGCGTGTGCGCCAACGTGCTCAACCTGCTCAAGCTCAAGGTGGGGGTGCCGGCGAGCGAG
GAGTGCTGCCCGCTGCTGGGGGGGCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACC
GTCATCAAGGCCAACGTCCTCGGCATCAACATCAACGTCCCCGTCGACCTCATGCTGCTC
CTTAACTACTGTCACAAGACCTGCCCTTCCGACTTCTTCTGCCCACTCATTTGATTCTTA
ATCTTTATTACCACCACAACCCTAGCTACCTAATTAAGGCTTAAGCTTCGCATGGTTTAT
TCTGTGTGTTGCTCGCGTGTATACGTTTGTACTTATCTTTTATCTTTCGTCGTTATTACG
GTTGACCTATTTTTGTCCTTTTATTTCTGTCTCTGAATCTCTTGGTCGCTGTCCCTGTGT
TATTATTTTGTCGCCCTCGCTCTCCTGCTTCTTTTTTCTCTCTGCTCCCCCATTTTTTTT
TTTCTCTTGTCCCTTTGGTTGTCCTCCCCATCCTGTTGCTGAGTTTCTGTGGCGGTTTTT
TCTGTTTCCTTTCTGGTCCTCGCGGGTCTTAGGACTCTTCCTCGGTATTGTTGTTCGTTC
TCCCACCCGCTTAATGCGTTTTTTCTTTTTCTCTCATACTTCATGCCACTACTTTTCCTT
TTTTGTATTGGCTTAGGCGTCGGAGTCGTTGTATTCCTTCCCGGTAACTTCTATTTTAAG
TTTTCAAAT

consensusID : consensus_15550#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 744
fasta sequence

                              [TAGCTAGCTAGCAGCAGCAAAATATACTATATCATCATCAATTAATTAAGCTAGTACAATTAAGAAGTAGCTAAGTAGTCCAATACGATGGGCGGCGGCAAGAATAAGGTGCAGGTTTGTGCGGTGTTCGTCGTTGCTCTGAATATGGTCATCTCCATGCAGATGGGTGCAGTGCAGGCATGCGAGCCCTACTGCCCCACCCCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGCGAATAAGTGCCCGATCGACGCGCTGAAGCTGGGCGTGTGCGCCAACGTGCTCAACCTGCTCAAGCTCAAGGT-GGGGGTGCCGGCGAGCGAGGAGTGCT-GCCCGCTGCT-GGGGGGGCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACGTCCTCGGCATCAACATCAACGTCCCCGTCGACCTCGTCCTCCTCCTCAACTACTGCCACAAGACCTGCCCTTCCGACTTCTCCTGCCCACTCATCTGATTCTTAATCTTCATTACCACCACAACCCTAGCTACCTAATTAAGGCTTAAGCTTTGCATGGCTTAGTCTGTGTGTTGCAGTTGTGTCAT-ACATATATACTTATCTCGATCTATCAGT-GTGATTATTGATGATCAGATCGATCATCTAATATATGTATCTT-GTTATTTTAATGCGTACTGTCAAATAAAAGTTTCCTCCAGTGTACGTACGTACTACTTGTGCTAAAAAAAA]

[+] EMBL AK062654             [TAGCTAGCTAGCAGCAGCAAAATATACTATATCATCATCAATTAATTAAGCTAGTACAATTAAGAAGTAGCTAAGTAGTCCAATACGATGGGCGGCGGCAAGAATAAGGTGCAGGTTTGTGCGGTGTTCGTCGTTGCTCTGAATATGGTCATCTCCATGCAGATGGGTGCAGTGCAGGCATGCGAGCCCTACTGCCCCACCCCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGGGAATAAGTGCCCGATCGACGCGCTGAAGCTGGGCGTGTGCGCCAACGTGCTCAACCTGCTCAAGCTCAAGGT GGGGGTGCCGGCGAGCGAGGAGTGCT GCCCGCTGCT GGGGGGGCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACGTCCTCGGCATCAACATCAACGTCCCCGTCGACCTCGTCCTCCTCCTCAACTACTGCCACAAGACCTGCCCTTCCGACTTCTCCTGCCCACTCATCTGATTCTTAATCTTCATTACCACCACAACCCTAGCTACCTAATTAAGGCTTAAGCTTTGCATGGCTTAGTCTGTGTGTTGCAGTTGTGTCAT ACATATATACTTATCTCGATCTATCAGT GTGATTATTGATGATCAGATCGATCATCTAATATATGTATCTT GTTATTTTAATGCGTACTGTCAAATAAAAGTTTCCTCCAGTGTA                           ]
[+] EMBL BE040899             [                                                                                                                                                                       TGCAGTGCAGGCATGCGAGCCCTACTGCCCCACCCCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGCGAATAAGTGCCCGATCGACGCGCTGAAGCTGGGCGTGTGCGCCAACGTGCTCAACCTGCTCAAGCTCAAGGT GGGGGTGCCGGCGAGCGAGGAGTGCT GCCCGCTGCT GGGGGGGCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACGTCCTCGGCATCAACATCAACGTCCCCGTCGACCTCGTCCTCCTCCTCAACTACTGCCACAAGACCTGCCCTTCCGACTTCTCCTGCCCACTCATCTGATTCTTAATCTTCATTACCACCACAACCCTAGCTACCTAATTAAGGCTTAAGCTTTGCATGGCTTAGTCTGTGTGTTGCAGTTGGGTCATAACATATATACTTATCTCGATCTATCAGTGGGGATTATTGATGATCAGATCGATCATCT ATATATGTATCTTGGTTA TTTAATGCGTACTGgc                                                  ]
[+] EMBL BE041103             [                                                                                                                                                                                                                      TGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGCGAATAAGTGCCCGATCGACGCGCTGAAGCTGGGCGTGTGCGCCAACGTGCTCAACCTGCTCAAGCTCAAGGT GGGGGTGCCGGCGAGCGAGGAGTGCT GCCCGCTGCT GGGGGGGCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACGTCCTCGGCATCAACATCAACGTCCCCGTCGACCTCGTCCTCCTCCTCAACTACTGCCACAAGACCTGCCCTTCCGACTTCTCCTGCCCACTCATCTGATTCTTAATCTTCATTACCACCACAACCCTAGCTACCTAATTAAGGCTTAAGCTTTGCATGGCTTAGTCTGTGTGTTGCAGTTGTGTCAT ACATATATACTTATCTCGATCTATCAGT GTGATTATTGATGATCAGATCGATCATCT ATATATGTATCTT GTTATTTTAATGCGTACTGTCAAATAAAAGTTTCCTCCAGTGTACGTACGTACTACTTGTGCTAAAAAAAA]
[-] EMBL CB964657             [                                                                                                                                                                                                                                                                                         CGTGTTCTCCATCGTGCTCATCCTGCTCTAGCTCATGGT GGGGGTTCCGTCGAGCGAGGAGTTCTGGCCCGCTGCT GGGGGGGCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACGTCCTCGGCATCTACATCAACGTCCCCGTCGACCTCGTCCTCCTCCTCAACTACTGCCACAAGACCTGCCCTTCTGA TGTTGGAGCCCGCTCATCTGATTCTTAATCTTCATTACCACCACTACCCTAGCTACCTAATTAAGGCTTAAGCTTTGCATGGCTTACTCTGTGTGTTGCAGTTGTGTCAT ACATATATACTTATCTCGATCTATCAGT GTGATTATTGATGATCAGATCGATCATCTAATATATGTATCTT GTTATTTTAATGCGTACTGTCAAATAAAAGTTTCCTCCAGT                              ]
[+] EMBL BE229577             [                                                                                                                                                                                                                                                                                                          cgagCCTGCTCAAGCTCAAGGTGGGGGGTGCCGGCGAGCGAGGAGTGCT GCCCGCTGCTGGGGGGGGCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACGTCCTCGGCATCAACATCAACGT CCCGTCGACCTCGTCCTCCTCCTCAACTACTGCCACAAGACCTG CCTTCCGACTTCTCCTGCCCACTCATCTGATTCTTAATCTTCATTACCACCACAACCCTAGCTACCTAATTAAGGCTTAAGCTTTGCATGGCTTAGTCTGTGTGTTGCAGTTGTGTCAT ACATATATACTTATCTCGATCTMTCAGT GTGATTATTGATGATCAGATCGATCATCTAATATATGTATCTY GTTATTTTAAaaaaa                                                        ]




>consensus_15550#2
TAGCTAGCTAGCAGCAGCAAAATATACTATATCATCATCAATTAATTAAGCTAGTACAAT
TAAGAAGTAGCTAAGTAGTCCAATACGATGGGCGGCGGCAAGAATAAGGTGCAGGTTTGT
GCGGTGTTCGTCGTTGCTCTGAATATGGTCATCTCCATGCAGATGGGTGCAGTGCAGGCA
TGCGAGCCCTACTGCCCCACCCCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCG
GGTGGAGCGAATAAGTGCCCGATCGACGCGCTGAAGCTGGGCGTGTGCGCCAACGTGCTC
AACCTGCTCAAGCTCAAGGTGGGGGTGCCGGCGAGCGAGGAGTGCTGCCCGCTGCTGGGG
GGGCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACGTCCTC
GGCATCAACATCAACGTCCCCGTCGACCTCGTCCTCCTCCTCAACTACTGCCACAAGACC
TGCCCTTCCGACTTCTCCTGCCCACTCATCTGATTCTTAATCTTCATTACCACCACAACC
CTAGCTACCTAATTAAGGCTTAAGCTTTGCATGGCTTAGTCTGTGTGTTGCAGTTGTGTC
ATACATATATACTTATCTCGATCTATCAGTGTGATTATTGATGATCAGATCGATCATCTA
ATATATGTATCTTGTTATTTTAATGCGTACTGTCAAATAAAAGTTTCCTCCAGTGTACGT
ACGTACTACTTGTGCTAAAAAAAA

consensusID : consensus_15550#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 479
fasta sequence

                              [GGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAATAAGTGCCCGATCGACGCGCTGAAGCTGGGCGTGTGCGCCAACGTGCTCAACCTGCTCAAGCTCAAGGCCAACGTCCTCGGCATCAACATCAACGTCCCCGTCGACCTCGTCCTCCTCCTCAACTACTGCCACAAGACCTGCCCTTCCGACTTCTCCTGCCCACTCATCTGATTCTTAATCTTCATTACCACCACAACCCTAGCTACCTAATTAAGGCTTAAGCTTTGCATGGCTTAGTCTGTGTGTTGCAGTTGTGTCATACATATATACTTATCTCGATCTATCAGTGTGATTATTGATGATCAGATCGATCATCTAATATATGTATCTTGTTATTTTAATGCGTACTGTCAAATAAAAGTTTCCTCCAGTGTA]

[+] EMBL AK063037             [GGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAATAAGTGCCCGATCGACGCGCTGAAGCTGGGCGTGTGCGCCAACGTGCTCAACCTGCTCAAGCTCAAGGCCAACGTCCTCGGCATCAACATCAACGTCCCCGTCGACCTCGTCCTCCTCCTCAACTACTGCCACAAGACCTGCCCTTCCGACTTCTCCTGCCCACTCATCTGATTCTTAATCTTCATTACCACCACAACCCTAGCTACCTAATTAAGGCTTAAGCTTTGCATGGCTTAGTCTGTGTGTTGCAGTTGTGTCATACATATATACTTATCTCGATCTATCAGTGTGATTATTGATGATCAGATCGATCATCTAATATATGTATCTTGTTATTTTAATGCGTACTGTCAAATAAAAGTTTCCTCCAGTGTA]




>consensus_15550#3
GGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCG
ATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAATAAGTGCCCGATCGACG
CGCTGAAGCTGGGCGTGTGCGCCAACGTGCTCAACCTGCTCAAGCTCAAGGCCAACGTCC
TCGGCATCAACATCAACGTCCCCGTCGACCTCGTCCTCCTCCTCAACTACTGCCACAAGA
CCTGCCCTTCCGACTTCTCCTGCCCACTCATCTGATTCTTAATCTTCATTACCACCACAA
CCCTAGCTACCTAATTAAGGCTTAAGCTTTGCATGGCTTAGTCTGTGTGTTGCAGTTGTG
TCATACATATATACTTATCTCGATCTATCAGTGTGATTATTGATGATCAGATCGATCATC
TAATATATGTATCTTGTTATTTTAATGCGTACTGTCAAATAAAAGTTTCCTCCAGTGTA

consensusID : consensus_15550#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 367
fasta sequence

                              [CAACATCCTGGGCATCAATTTCAACATCCCCGTGGATTTTTTTTTCCTTTTCAAATAATGCCACAAGACCTGCCCCTCCGATTTCACCTGCCCTTTTTAAATTAATGGATCCTCCGATCCCTTAATTACCATACCATTACCCCATGCATCAATATCCATATATATATAAACCCTTTCGCAGGGACTTATACTATGTTTTGTCAAACAAAAAAATGTGTCGAACGATCGATTTATCCCTGATATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGTAAACCGTCAAATAAAAGTTTTTTCCCCTTGTGTTAATAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF291695             [CAACATCCTGGGCATCAATTTCAACATCCCCGTGGATTTTTTTTTCCTTTTCAAATAATGCCACAAGACCTGCCCCTCCGATTTCACCTGCCCTTTTTAAATTAATGGATCCTCCGATCCCTTAATTACCATACCATTACCCCATGCATCAATATCCATATATATATAAACCCTTTCGCAGGGACTTATACTATGTTTTGTCAAACAAAAAAATGTGTCGAACGATCGATTTATCCCTGATATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGTAAACCGTCAAATAAAAGTTTTTTCCCCTTGTGTTAATAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL CA756402             [                                                                                                                                                                                                                        GTCGAACGATCGATCTATCACTGATATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGTATACCGTCAAATAAAAGTTTCTTCCACTTGTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_15550#4
CAACATCCTGGGCATCAATTTCAACATCCCCGTGGATTTTTTTTTCCTTTTCAAATAATG
CCACAAGACCTGCCCCTCCGATTTCACCTGCCCTTTTTAAATTAATGGATCCTCCGATCC
CTTAATTACCATACCATTACCCCATGCATCAATATCCATATATATATAAACCCTTTCGCA
GGGACTTATACTATGTTTTGTCAAACAAAAAAATGTGTCGAACGATCGATTTATCCCTGA
TATGATATGATTGATCCATCAGCCTGATCTCTGTATCTTGTTATTTGTAAACCGTCAAAT
AAAAGTTTTTTCCCCTTGTGTTAATAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA

consensusID : consensus_15550#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 247
fasta sequence

                              [TACTATATCATCNTCAATNAATTAAGCTAGTACNATTAAGAAGTAGCTAAGTAGTCCAATACGNTGGGCGGCGGCAAGAATAAGGTGCAGGTTTGTGCGGTGTTCGTCGTTGCTCTGAATATGGTCATCTCCATGCNNATGGGTGCAGTNCNNGCTTGCNAGCCCTACTGCCCCACCCCGACGCCGCCNGNNACGTNTCCTCTTTCTCANCGTCCGGTTNNNCCNTNCCTCCCTNANNTTTTTATNC]

[+] EMBL BE228272             [TACTATATCATCNTCAATNAATTAAGCTAGTACNATTAAGAAGTAGCTAAGTAGTCCAATACGNTGGGCGGCGGCAAGAATAAGGTGCAGGTTTGTGCGGTGTTCGTCGTTGCTCTGAATATGGTCATCTCCATGCNNATGGGTGCAGTNCNNGCTTGCNAGCCCTACTGCCCCACCCCGACGCCGCCNGNNACGTNTCCTCTTTCTCANCGTCCGGTTNNNCCNTNCCTCCCTNANNTTTTTATNC]




>consensus_15550#5
TACTATATCATCNTCAATNAATTAAGCTAGTACNATTAAGAAGTAGCTAAGTAGTCCAAT
ACGNTGGGCGGCGGCAAGAATAAGGTGCAGGTTTGTGCGGTGTTCGTCGTTGCTCTGAAT
ATGGTCATCTCCATGCNNATGGGTGCAGTNCNNGCTTGCNAGCCCTACTGCCCCACCCCG
ACGCCGCCNGNNACGTNTCCTCTTTCTCANCGTCCGGTTNNNCCNTNCCTCCCTNANNTT
TTTATNC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15550#1      ------------------------------------------------------------
consensus_15550#3      ------------------------------------------------------------
consensus_15550#0      CATCCCGGCCGATCGAGCTAGCAAATATCAAAAAGCAGCTCCAGCTTCTTCTGATCGATC 60
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      ------------------------------------------------------------
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      ------------------------------------------------------------
consensus_15550#3      ------------------------------------------------------------
consensus_15550#0      GATCGAGCTGAGCTATAGGCAGTAGCTGCTAATTAAGCTAATTAATTGCTAAGCAGTAGT 120
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      ------------------------------------------------------------
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      ------------------------------------------------------------
consensus_15550#3      ------------------------------------------------------------
consensus_15550#0      AGAGCTAGCTAATTAATTAAGATGGCCGGCAAGAAGGTGCAGGTTTGTGCGCTGTTCCTT 180
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      ------------------------------------------------------------
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      ------------------------------------------------------------
consensus_15550#3      ------------------------------------------------------------
consensus_15550#0      GCCCTCAATGTGCTCTTCACCATGCAGATGGGTGCAGTAGTGCAGGCATGCGAGCCCTAC 240
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      ------------------------------------------------------------
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      ---------------------------CCGCCTCCGTCGCCGCCGTCTGGTGGAGCGAAT 33
consensus_15550#3      -------------------GGATCGCACGGCCCTCGT-GCCGGCGACGCATCATTCAAAT 40
consensus_15550#0      TGCCCCACACCGACGCCGCCGGTGACGCCGCCTCCGTCGCCGCCGTCGGGTGGAGGGAAT 300
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      ------------------------------------------------------------
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      AAGTGCCCGATCGACGCGCTGAAGCTGGGCGTGTGCGCCAACGTGCTCAACCTGCTCAAG 93
consensus_15550#3      TTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGC-CTACCATGGTGGTGACG-----G 94
consensus_15550#0      AAGTGCCCGATCGACGCGCTGAAGCTGAGCGTGTGCGCCAACGTGCTCAACCTGCTGAAG 360
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      ------------------------------------------------------------
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      CTCAAGGTGGGGGTGCCGGCGAGCGAGGAGTGCTGCCCGCTGCTGGGGGGGCTCGTCGAC 153
consensus_15550#3      GTGACGGAATAAGTGCC--CGATCGACGCG------CTGAAGCTGGGCGTGTGCGCCAAC 146
consensus_15550#0      CTGAAGATCGGCGTGCCGGAGAGCGAGCAGTGCTGCCCGTTGCTGGGTGGCCTCGTCGAC 420
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      ------------------------------------------------------------
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      CTCGACGCCGCCGTCTGCCTCTGCACCGTCATCAAGGCCAACGTCCTCGGCATCAACATC 213
consensus_15550#3      GTG-----CTCAACCTGCTCAAGC-------TCAAGGCCAACGTCCTCGGCATCAACATC 194
consensus_15550#0      CTCGACGCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACATCCTCGGCATCAATCTC 480
consensus_15550#4      --------------------------------------CAACATCCTGGGCATCAATTTC 22
consensus_15550#2      ------------------------------------------------------------
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      AACGTCCCCGTCGACCTCATGCTGCTCCTTAACTACTGTCACAAGACCTGCCCTTCCGAC 273
consensus_15550#3      AACGTCCCCGTCGACCTCGTCCTCCTCCTCAACTACTGCCACAAGACCTGCCCTTCCGAC 254
consensus_15550#0      AACATCCCCGTCGATCTCTCTCTCCTTCTCAACTACTGCCACAAGACCTGCCCCTCCGAC 540
consensus_15550#4      AACATCCCCGTGGATTTTTTTTTCCTTTTCAAATAATGCCACAAGACCTGCCCCTCCGAT 82
consensus_15550#2      ---------------TAGCTAGCTAGCAGCAGCAAAATATACTATATCATCATCAATTAA 45
consensus_15550#5      ---------------------------------------TACTATATCATCNTCAATNAA 21
                                                               ** * * *  *       * 

consensus_15550#1      TTCTTCTG--CCCACTCATTTGATTC-----TTAATCTTTATTACCACCACAACCCTAGC 326
consensus_15550#3      TTCTCCTG--CCCACTCATCTGATTC-----TTAATCTTCATTACCACCACAACCCTAGC 307
consensus_15550#0      TTCACCTGCCCTCTCTAAATTAATCGATCCTCCGATCCCT-TAATTACCATACCATTACA 599
consensus_15550#4      TTCACCTGCCCTTTTTAAATTAATGGATCCTCCGATCCCT-TAATTACCATACCATTACC 141
consensus_15550#2      TTAAGCTAGTACAATTAAGA-AGTAG-----CTAAGTAGT-CCAATACGATGG-GCGGCG 97
consensus_15550#5      TTAAGCTAGTACNATTAAGA-AGTAG-----CTAAGTAGT-CCAATACGNTGG-GCGGCG 73
                       **   **        * *     *          *        *  **            

consensus_15550#1      TACCTAATTAAGGCTTAAGCTT-CGCATGGTTTATTCTGTGTGTTGCTCGCGTG-T-ATA 383
consensus_15550#3      TACCTAATTAAGGCTTAAGCTT-TGCATGGCTTAGTCTGTGTGTTGCAGTTGTG-TCATA 365
consensus_15550#0      CCATGCATCAATATCCATATATATATAAACCCTTTCGCACGTACTTATACTATGTTTTGT 659
consensus_15550#4      CCATGCATCAATATCCATATATATATAAACCCTTTCGCAGGGACTTATACTATGTTTTGT 201
consensus_15550#2      GCAAGAAT-AAGGTGCAGGTTTGTGCGG---TGTTCGTCGTTGCTCTGAATATGGTCATC 153
consensus_15550#5      GCAAGAAT-AAGGTGCAGGTTTGTGCGG---TGTTCGTCGTTGCTCTGAATATGGTCATC 129
                             ** **     *    *                      *       ** *    

consensus_15550#1      CGTTTGTACTTATCTTTTATCTTTCGTCGTTATTACGGTTGACCTATTTTTGTCCTTTTA 443
consensus_15550#3      CATATATACTTATCTCG-ATCTATCAGTGTGATTATTGATGATC-AGATCGATCATCTAA 423
consensus_15550#0      CATACATATATATGTGTCGAACGATCGATCTATCACTGATATGATATGATTGATCCATCA 719
consensus_15550#4      CAAACAAAAAAATGTGTCGAACGATCGATTTATCCCTGATATGATATGATTGATCCATCA 261
consensus_15550#2      TCCATGCAGATGGGTGCAGTGCAGGCATGCGAGCCCTACTGCCCCACCCCGACGCCGCCG 213
consensus_15550#5      TCCATGCNNATGGGTGCAGTNCNNGCTTGCNAGCCCTACTGCCCCACCCCGACGCCGCCN 189
                                     *                *       *     *              

consensus_15550#1      TTTCTGTCTCTGAATCTCTTGGTCGCTGTCCC-TGTGTTATTATTTTGTCGCCCTCGCTC 502
consensus_15550#3      TATATGTATCTTGTTATTTTAATGCGTACTGT-CAAATAAAAGTTTCCTCCAGTGTA--- 479
consensus_15550#0      GCCTGATCTCTGTATCTTGTTATTTGTATACCGTCAAATAAAAGTTTCTTCCACTTGTGT 779
consensus_15550#4      GCCTGATCTCTGTATCTTGTTATTTGTAAACCGTCAAATAAAAGTTTTTTCCCCTTGTGT 321
consensus_15550#2      GTGACGCCGCC---TCCG-TCGCCGCCGTCGGGTGGAGCGAATAAGTGCCCGATCGACGC 269
consensus_15550#5      GNNACGTNTCC---TCTT-TC-TCANCGTCCGGTTNNNCCN-----TNCCTCCCTNANNT 239
                                *    *    *                                        

consensus_15550#1      TCCTGCTTCTTTTTTCTCTCTGCTCCCCCATTTTTTTTTTTCTCTTGTCCCTTTGGTTGT 562
consensus_15550#3      ------------------------------------------------------------
consensus_15550#0      TAAAAAAAAAAAAAAAAAAAAACCCCCGGAAATGTTATTCGTTGGGATGATTGTCAACCA 839
consensus_15550#4      TAATAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------- 367
consensus_15550#2      GCTGAAGCTGGGCGTGTGCGCCAACGTGCTCAACCTGCTCAAGCTCAAGGTGGGGGTGCC 329
consensus_15550#5      TTTTATNC---------------------------------------------------- 247
                                                                                   

consensus_15550#1      CCTCCCCATCCTGTTGCTGAGTTTCTGTGGCGGTTTTTTCTGTTTCCTTTCTGGTCCTCG 622
consensus_15550#3      ------------------------------------------------------------
consensus_15550#0      ATTTTGTTTTTCTTCCCTCGGGGGGGGCCGGGCCCCATTCCCCTTATGTGGGTGTTTCCC 899
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      GGCGAGCGAGGAGTGCTGCCCGCTGCTGGGGGGGCTCGTCGACCTCGACGCCGCCGTCTG 389
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      CGGGTCTTAGGACTCTTCCTCGGTATTGTTGTTCGTTCTCCCACCCGCTTAATGCGTTTT 682
consensus_15550#3      ------------------------------------------------------------
consensus_15550#0      CCCTCCTGGCCGTTTTTAAAATCTGACTGGAAACCCTGGTTCCCATTTATCCTTTAACAT 959
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      CCTCTGCACCGCCATCAAGGCCAACGTCCTCGGCATCAACATCAACGTCCCCGTCGACCT 449
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      TTCTTTTTCTCTCATACTTCATGCCACTACTTTTCCTTTTTTGTATTGGCTTAGGCGTCG 742
consensus_15550#3      ------------------------------------------------------------
consensus_15550#0      GCCTCTTTTCGTTGGTTATTGCAGAGGCCCACCGCCCCTTCCAAATGCCAACCAAGGAAG 1019
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      CGTCCTCCTCCTCAACTACTGCCACAAGACCTGCCCTTCCGACTTCTCCTGCCCACTCAT 509
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      GAGTCGTTGTATTCCTTCCCGGTAACTTCTATTTTAAGTTTTCAAAT------------- 789
consensus_15550#3      ------------------------------------------------------------
consensus_15550#0      GGACCGCCTTGGGGCTATAGCCGGGTTGGGGTCGCGTGACTTCTTTCGGCCACCCCCTGT 1079
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      CTGATTCTTAATCTTCATTACCACCACAACCCTAGCTACCTAATTAAGGCTTAAGCTTTG 569
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      ------------------------------------------------------------
consensus_15550#3      ------------------------------------------------------------
consensus_15550#0      TATTTGCCTTATCCCTGGAGTCCC------------------------------------ 1103
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      CATGGCTTAGTCTGTGTGTTGCAGTTGTGTCATACATATATACTTATCTCGATCTATCAG 629
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      ------------------------------------------------------------
consensus_15550#3      ------------------------------------------------------------
consensus_15550#0      ------------------------------------------------------------
consensus_15550#4      ------------------------------------------------------------
consensus_15550#2      TGTGATTATTGATGATCAGATCGATCATCTAATATATGTATCTTGTTATTTTAATGCGTA 689
consensus_15550#5      ------------------------------------------------------------
                                                                                   

consensus_15550#1      -------------------------------------------------------
consensus_15550#3      -------------------------------------------------------
consensus_15550#0      -------------------------------------------------------
consensus_15550#4      -------------------------------------------------------
consensus_15550#2      CTGTCAAATAAAAGTTTCCTCCAGTGTACGTACGTACTACTTGTGCTAAAAAAAA 744
consensus_15550#5      -------------------------------------------------------