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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15937#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 2016 fasta sequence
[TCAGTTCTCAAAAAAAAAAAAAAAATCCTCTTCCACTTCTGACTTCTCGCCAAGGGAGGTTGCTTCGCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA-TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGGAGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTTCAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT-GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATA-GGAACATTTGGAGCATCAGTTGCATC-ATATGAT--CAAGAA-TATTTGAAGAACAC-AAC-TCCACCTCC-TGCT-GAAT-CTGCATA-TAGG-T-TAT-GGTGGTACC-AAGTTT-GC-AGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATG-ATAG-TGTCCGTTCTGCAAAGATTGACACAAGGTACCATTT-GGACTTGTG-CAGAAATGTTTTT-GGGG-AA--GGAGTT-T-ACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC-TCCA-GAAGCTGTGA-AC--A-AAGTAAGAAAG-CA-GATCGTCGATCA-CA-TTGATTTATGGTTATCAGAATGTCAAGAG-CAAGGACACGACAATGAGCCA-TTGCTGGG-CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG-ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA-CCA-TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU032136 [TCAGTTCTCAAAAAAAAAAAAAAAATCCTCTTCCACTTCTGACTTCTCGCCAAGGGAGGTTGCTTCGCTTTGCTTGCTCGCGTCGGAAACGNATCGTCTCCTCTNCGNCGCCGCAGCGGAAGCGGAAGCNGGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGG NCNGCAGTCGCCGCCGTGGCGGTGCTCCTNCTGCTGGCTCCCGGGGCGGAG CGAGTCGGGCTGTGGCTGCCGNCTCCCACCGGTNGCGGGGGGCG CTCGGCGGCG CGCCGAGCCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCAGA ]
[+] EMBL CB640576 [ AAAAAAAAAAAATCCTCTTCCACTTCTGACTTCTCGCCAAGGGAGGTTGCTTCGCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTTCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCG ]
[+] EMBL CB640615 [ AAAAAAAAAAAATCCTCTTCCACTTCTGACTTCTCGCCAAGGGAGGTTGCTTCGCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCNGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCANACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAACTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGT ]
[+] EMBL AK070496 [ CCACTTCTGACTTCTCGCCAAGGGAGGTTGCTTCGCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGGAGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTTCAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATA GGAACATTTGGAGCATCAGTTGCATC ATATGAT CAAGAA TATTTGAAGAACAC AAC TCCACCTCC TGCT GAAT CTGCATA TAGG T TAT GGTGGTACC AAGTTT GC AGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATG ATAG TGTCCGTTCTGCAAAGATTGACACAAGGTACCATTT GGACTTGTG CAGAAATGTTTTT GGGG AA GGAGTT T ACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA AC A AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAc ]
[+] EMBL CB674774 [ GCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGGAGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTTCAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAA ]
[+] EMBL CB664162 [ CTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGGAGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTTCAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGG ]
[+] EMBL CB640391 [ GCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGC ]
[+] EMBL CB640286 [ GCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCTCTCTGCACGTCCCTGACGCCGGAGGAGCGGTGGCTGGACCTCACCCTTGACCACTTGCTCCCCACCGCCCATCGGCTGTTCAAGCTGCGTTGCTATGAATTCCTT ]
[+] EMBL CF322980 [ ACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGGAGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTTCAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCA ]
[+] EMBL CF324451 [ TCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTA ]
[+] EMBL CF323506 [ ACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGA ]
[+] EMBL AU075501 [ TGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTANTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGNGCTCCCCAATAGTTNAAAGCAAAGAAGAA ]
[+] EMBL CF324350 [ GAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATA GGAACATTTGGAGCATCAGTTGCATC ATATGAT CAAGAA TATTTGAAGAACAC AAC TCCACCTCC TGCT GAAT CTGCATA TAGG T TATGGGTGGTACC AAGTTT GCAAGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATG ATAG TG ]
[+] EMBL CF323266 [ CAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATA GGAACATTTGGAGCATCAGTTGCATC ATATGAT CAAGAA TATTTGAAGAACAC AAC TCCACCTCC TGCT GAAT CTGCATA TAGG TNTAT GGTGGTACC AAGTTT GC AGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATG ATAGNTGTCCGTTCTGCAAAGATTGACACAAGGTACCATTT GGACTTGTG CAGAAATGTTTTT GGGGAAA GGAGTT TNACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGA ]
[+] EMBL CF324015 [ gCAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATA GGAACATTTGGAGCATCAGTTGCATC ATATGAT CAAGAA TATTTGAAGAACAC AAC TCCACCTCC TGCT GAAT CTGCATA TAGGNT TAT GGTGGTACC AAGTTT GC AGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATGAATAG TGTCCGTTCTGCAAAGATTGACACAAGGTACCATTT GGACTTGTG CAGAAATGTTTTT GGGG AAANGGAGTTNT ACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGA ]
[+] EMBL CF326654 [ TTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATATTGAACATTTGGAGCATCAGTTGCATC ATATGAT CAAGAA TATTTGAAGAACAC AAC TCCACCTCC TGCT GAAT CTGCATA TAGG T TAT GGTGGTACC AAGTTT GC AGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATG ATAG TGTCCGTTCTGCAAAGATTGACACAAGGTACCATTT GGACTTGTG CAGAAATGTTTTT GGTT TA GGAGTT T ACCCTGATGTATTCATGACATATTTATACTA ]
[+] EMBL AU032137 [ CATCNATTTGGTTCCAAGAATTTTTTGGAGGACCCNAACTTCCACCTCCNTGCTGGAATCCGGCATATTAGG T TAT GGTGGTACCAAAGTTTNCC AGTGAAGTTGCATATTCCCAAGTGGCCCCAAAAAATG ATAG TGTCCGTTCTGCAAAGATTGACACCAGGTCCCATTT GGACTTGTG CAGAAATGTTTTT GGGG AA GGAGTT T ACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA AC A AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAA CTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAA ]
[+] EMBL C99358 [ ATTTGGGACTTGTGCCAGAAATGTTTTTGGGGG AA GGAGTT T NCCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAG ATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA AC A AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAA CTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAAaaaaaa ]
[-] EMBL CB664161 [ TTT GGGG AA GGAGTT T ACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA AC A AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAca ]
[-] EMBL CB674775 [ TACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA AC A AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGAT ]
[+] EMBL BM419696 [ TGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGAGAC C AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGGCCAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTACGGTGACGACCTCTGTCATTTGTTAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAAAAAA ]
[+] EMBL BM419796 [ GGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA ACCNC AAGTAAGAAAGNCA GATCGTCGATCACCACTTGATTTATGGTTATCAGAATGTCAAGAGCCAAGGACACGACAATGAGCCACTTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTACGGTGACGACCTCTGTCATTTGTTAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTACCCACTGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAAAAAAA ]
[+] EMBL BI808452 [ GTTCATCTTCCACGAAGCTGTGACAC ACAAGTAAGAAA CACGATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCC TTGCT GG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATGAATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACCATTGCTCAAACACTACTACGGTGACGACCTCTGTCATTTGTC ATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAA ]
[-] EMBL BE230510 [ CATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACCAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTACGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAAAAAA ]
[+] EMBL AU031096 [ TATGTTCAAAAGGCCATGAGTACAAGACAATGCAGNTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15937#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 393 fasta sequence
[TCCTCTCCGCCGCCGCAGCGGAAGCGNAAGCNNGCGCNANANANAGATGGCGTCCANNGCCGTCGGCCGNCANTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCGATCGGNCTGTGGCTGCNGCNTCCCACCGGTGGNGGGGGGCGCTTCGGCGGCGCGCCGANCCAGGNAGGTACCTAANGCAGGAGGAGCGGTGGATGGACCAAACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTNAAGCAGCGTTACTATNANTTCCTTGATTACTACCGAGCTTCAAAAGGGCCAATTTTTTTATATATCTTTGGGAGAATTTTCGTGCAAGGGGATTTCTAACAGCTAATTAGCTGTAATGGAAAAAAAGTTTNGTT]
[+] EMBL OSC668 [TCCTCTCCGCCGCCGCAGCGGAAGCGNAAGCNNGCGCNANANANAGATGGCGTCCANNGCCGTCGGCCGNCANTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCGATCGGNCTGTGGCTGCNGCNTCCCACCGGTGGNGGGGGGCGCTTCGGCGGCGCGCCGANCCAGGNAGGTACCTAANGCAGGAGGAGCGGTGGATGGACCAAACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTNAAGCAGCGTTACTATNANTTCCTTGATTACTACCGAGCTTCAAAAGGGCCAATTTTTTTATATATCTTTGGGAGAATTTTCGTGCAAGGGGATTTCTAACAGCTAATTAGCTGTAATGGAAAAAAAGTTTNGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15937#0 TCAGTTCTCAAAAAAAAAAAAAAAATCCTCTTCCACTTCTGACTTCTCGCCAAGGGAGGT 60
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 TGCTTCGCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGA 120
consensus_15937#1 --------------------------------------TCCTCTCCGCCGCCGCAGCGGA 22
**********************
consensus_15937#0 AGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCC 180
consensus_15937#1 AGCGNAAGCNNGCGCNANANANAGATGGCGTCCANNGCCGTCGGC-CGNCANTCGCCGCC 81
**** **** **** * * * ************ ********* * ** ********
consensus_15937#0 GTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGATCGGGCTGTGGCTGCCGCCT 240
consensus_15937#1 GTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGC-GATCGGNCTGTGGCTGCNGCNT 140
************************************* ****** ********** ** *
consensus_15937#0 CCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAG 300
consensus_15937#1 CCCACCGGTGGNGGGGGGCGCTTCGGCGGCGC-GCCGANCCAGGNAGGTACCTAANGCAG 199
*********** ********* ********** **** ***** ******** * ****
consensus_15937#0 GAGGAGCGGTGGATGGACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTC 360
consensus_15937#1 GAGGAGCGGTGGATGGACCAAACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTN 259
******************** **************************************
consensus_15937#0 AAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTA 420
consensus_15937#1 AAGCAGCGTTACTATNANTTCCTTGATTACTACCGAGCTTCAAAAGGGCCAATTTTTTTA 319
*************** * ********************* **************** ***
consensus_15937#0 TATATCTGTGG-AGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGC 479
consensus_15937#1 TATATCTTTGGGAGAATTTTCGTGCAAGGGGATTTCTAACAGCTAATTAGCTGTAATGGA 379
******* *** ***** ********* ****** ********** ******** ****
consensus_15937#0 AAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCC 539
consensus_15937#1 AAAAAAGTTTNGTT---------------------------------------------- 393
*** ****** **
consensus_15937#0 TTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGA 599
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 TCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGG 659
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 AGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTT 719
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 CAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTC 779
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 TGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAA 839
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 AGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGC 899
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 AGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACT 959
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 GGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAAT 1019
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 AGTTGAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGA 1079
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 TTATTACATAGGAACATTTGGAGCATCAGTTGCATCATATGATCAAGAATATTTGAAGAA 1139
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 CACAACTCCACCTCCTGCTGAATCTGCATATAGGTTATGGTGGTACCAAGTTTGCAGTGA 1199
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 AGTTGCATATTTCCAAGTGGCTCCAAAAAATGATAGTGTCCGTTCTGCAAAGATTGACAC 1259
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 AAGGTACCATTTGGACTTGTGCAGAAATGTTTTTGGGGAAGGAGTTTACCCTGATGTATT 1319
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 CATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAA 1379
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 CGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTC 1439
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 ATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGC 1499
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 TCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATCTCCAGAAGCTGTGAACAAAGT 1559
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 AAGAAAGCAGATCGTCGATCACATTGATTTATGGTTATCAGAATGTCAAGAGCAAGGACA 1619
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 CGACAATGAGCCATTGCTGGGCAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCG 1679
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 AGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGAC 1739
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 TAGTATGATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCA 1799
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 AGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTG 1859
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 TCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTACCA 1919
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAA 1979
consensus_15937#1 ------------------------------------------------------------
consensus_15937#0 GATATTAGATAACCGGGTAAAAAAAAAAAAAAAAAAA 2016
consensus_15937#1 -------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||