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Oryza sativa
cluster # 15943 cluster # 15943       Sequences # 26       consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15943#0 length = 1203 sequences # 9  
consensus_15943#1 length = 1200 sequences # 13  
consensus_15943#2 length = 441 sequences # 1  
 consensus_15943#3 length = 225 sequences # 1  
consensus_15943#4 length = 196 sequences # 1  
consensus_15943#5 length = 158 sequences # 1  
consensusID : consensus_15943#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1203
fasta sequence 
                              [TTCCACTCCCTCAAGGCCTCAACCTACTCCAGCTATCTCGCCGTACCGCCGTCGCCGCTTCCTCTCGCACGCGCGCCGCCATGCCCTCTTCTCTTCATTCCTCGCGCGCGCCGTCGCTG-TCGTAGCTTCGTCGTCCTTCGCCTCCCTCGTGCCCTCATCCAGCCATTGTTACTGTGCCCGCGCTCCCGCGCCGGCAAGCGAGTCCGTCATGTCCACCAGTGAGGAGGCGGGGCTTCCAGATCCGGCAACAGCGGCCTCCTCGCTGGTGGATTGTCGGTTGCCCGGACGAGAGGGATGCGAGCCACTGCACTCCTCTTCTCCTCTTTCATCTCATCTCCACGTGGATCCNGGTCGTGGCCCTCTTCGGCAGTACAACGCTACTCTCCACTGTCTTCCTCACCCGTTCTCCATGCCGCTCACCTCCCCTCGGTGCCAGGATGGGGAGAGCAAGAGCAGCAGCTTGGGCACCAAAGCCACGACGGCGGAAGGCATGGGCTATGGCAAAGTACGGCGACGACGGCAGCAAGGCACAAACTATGGCAAGGAAGGAAAG-AAAAAAGGGAGTGAAGGCTAGATTATTCAGTACTAATGTTTAAACATCA-CCACCCAGGTGTGCAAATGGGAAATGAGCAGCGCTGTCAGAAAGAAATAGAAGACACTAA-ACATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGACATCAAAGATTCTCGGTGAACCTGACAATCTTGACATATTATT-GCATCCAGTGTTCCAATTTGGCAAGTCCAAAAGTACCATTTGTTTATATCTCCATTTTTACTAGCTCACTTTCCT-GATATATGTATGATA-GATCATTA-GGTGGGCAGTTCTTCCTGCCTTCTTCACATTGTA-GTTCTCAGTGTATTTTCTCTATATTCTTGATCTATACATGGACTTGGAATAAGGTGTTCACCCTGAATAAGGAGGGAGGTCAGTACATTTTTCCTACCTTAAAAATCT-GAAGTATGGTTGAATATTGTATTAGATGATATTCAGATAATATTGTTAGTTTATAACAGGCC-AGTTGGTTTATA-CCTAAGCCACTTGGTCAATGCAAAGCTATATATTCTATAATTCCTTTATTTCTTACCAAGGAATGAGAATGTGCCAGTATGTTCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF334432             [TTCCACTCCCTCAAGGCCTCAACCTACTCCAGCTATCTCGCCGTACCGCCGTCGCCGCTTCCTCTCGCACGCGCGCCGCCATGCCCTCTTCTCTTCATTCCTCGCGCGCGCCGTCGCTG TCGTAGCTTCGTCGTCCTTCGCCTCCCTCGTGCCCTCATCCAGCCATTGTTACTGTGCCCGCGCTCCCGCGCCGGCAAGCGAGTCCGTCATGTCCACCAGTGAGGAGGCGGGGCTTCCAGATCCGGCAACAGCGGCCTCCTCGCTGGTGGATTGTCGGTTGCCCGGACGAGAGGGATGCGAGCCACTGCACTCCTCTTCTCCTCTTTCATCTCATCTCCACGTGGATCCNGGTCGTGGCCCTCTTCGGCAGTACAACGCTACTCTCCACTGTCTTCCTCACCCGTTCTCCATGCCGCTCACCTCCCCTCGGTGCCAGGATGGGGAGAGCAAGAGCAGCAGCTTGGGCACCAAAGCCACGACGGCGGAAGGCATGGGCTATGGCAAAGTACGGCGACGACGGCAGCAAGGCACAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C27575               [             AGGCCTCAACCTACTCCAGCTATCTCGCCGTACCGCCGTCGCCGCTTCCTCTCGCACGCG GCCGCCATGCCCTCTTCTCTTCATTCCTCGCGCG GCCGTCG TGNTCGTAGCTTCGTCGTCCTTCGCCTCCCTCGTGCCCTCATCCAGCCATTGTTACTGTGCCCGCGCTCCCGCG  GCAAAGCGAGTCCGTCATGTCCACCAGTGAGGAGGCGGGGCTTCCAGATCCGGCAACAGCGGCCTNCTCGCTGGTGGATTGTCGGTTGCCCGGACGAGAGGGATGCGAGCCACTTNACTTCTCTTCTCCTCTTTAATCTAAT TTCACGTGGATCC GGTCGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF330873             [                    AACCTACTCCAGCTATCTCGCCGTACCGCCGTCGCCGCTTCCTCTCGCACGCGCGCCGCCATGCCCTCTTCTCTTCATTCCTCGCGCGCGCCGTCGCTG TCGTAGCTTCGTCGTCCTTCGCCTCCCTCGTGCCCTCATCCAGCCATTGTTACTGTGCCCGCGCTCCCGCGCCGGCAAGCGAGTCCGTCATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C28564               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGAAGGCATGGGCTATGGCAAAGTACGGCGACGACGGCAGCAAGGCACAAACTATGGCAAGGAAGGAAAGAAAAAAAGGGAGTGAAGGCTAGATTATTCAGTACTAATGTTTAAACATCA CCACCCAGGTGTGCAAATGGGAAATNAGCAGCGCTGTCAGAAAGAAATAGAAGACACTAA ACATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAANTTTTCTGATGACATCAAAGATTCTCGGTGAACCTGACAATCTTGACATATTATT GCATCCAGTGTTCCAATTTGGCAAGTCCAAAAGTACCATTTGTTTATATCTCCATTTTTACTAGCTCACTTTCCT GATATATGTATGATAGGATCATTA GGTNGGCAGTTCTTCCTGCCTTCTTCACATTGTA GTTCTCAGTGTA TTTCNCTATAATCTT                                                                                                                                                                                                                                                                                         ]
[-] EMBL CF334431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGCATGGGCTATGGCAAAGTACGGCGACGACGGCAGCAAGGCACAAACTATGGCAAGGAAGGAAAG AAAAAAGGGAGTGAAGGCTAGATTATTCAGTACTAATGTTTAAACATCACCCACCCAGGTGTGCAAATGGGAAATGAGCAGCGCTGTCAGAAAGAAATAGAAGACCCTAA ACATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTTTGATGACATCAAAGATTTTCGGTGAACCTGACAATCTTGACATATTATT GCATCCAGTGTTCCAATTTGGCAAGTCCAAAAGTACCATTTGTTTATATCTCCATTTTTACTAGCTCACTTTCCT GATATATGTATGATA GATCATTA GGTGGGCAGTTTTTCCTGCCTTTTTCACATTGTA GTTCTCAGTGTATTTTCTCTATATTCTTGATCTATACATGGACTTGGAATAAGGTGTTCACCCTGAAAAAaaaaaa                                                                                                                                                                                                                                         ]
[+] EMBL AU082350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACGACGGCAGCAAGGCACAAACTNTGGCAAGGAAGGAAAG AAAAAAGGGAGTGAAGGTTAGATTATTCAGTNCTAATGTTTAAACATCA CCACCCAGGTNTGCAAATGGGAAATGAGCAGCGCTGTCAGAAAGAAATNGAAGACACTAA ACATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGACATCAAAGATTCTCGGTGAACCTGACAATCTTGACATATTATT GCATCCAGTGTTCCAATTTGGCAAGTCCAAAAGTACCATTTGTTTATATCNCCATTTTTACTAGCTCACTTTCCT GATATATGTATGATA GATCATTA GGTGGGCAGTTCTTCCTGCCTTCTTCACATTGTA GTTCTCAGTGTATTTTCTCTATATTCTTGATCTATACATGGACTTGGAATAAGGTGTTCNCCCTGAATAAGGAGGGAGGTCAGTACATTTTTCCTACCTTAAAAATCT GAAGTATGGTTGAATATTGTATTAGATGATATTCAGATAATATTGTTAGTTTATAACAGGCC AGTTGGTTTATA CCTAAGCCACTTGGTCAATGCAAAGCTATATATTCTATAATTCCTTTATTTCTTACCAAGGAATGAGAATGTGCCAGTATGTTCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL OS0225A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAAAGGGAGTGAAGGCTAGATTATTCAGTACTAATGTTTAAACATCA CCACCCAGGTGTGCAAATGGGAAATGAGCAGCGCTGTCAGAAAGAAATAGAAGACACTAA ACATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGACATCAAAGATTCTCGGTGAACCTGACAATCTTGACATATTATT GCATCCAGTGTTCCAATTTGGCAAGTCCAAAAGTACCATTTGTTTATATCTCCATTTTTACTAGCTCACTTTCCT GATATATGTATGATA GATCATTA GGTGGGCAGTTC                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF330874             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGAGCAGCGCTGTCAGAAAGAAATAGAAGACACTAANACATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGACATCAAAGATTCTCGGTGAACCTGACAATCTTGACATATTATT GCATCCAGTGTTCCAATTTGGCAAGTCCAAAAGTACCATTTGTTTATATCTCCATTTTTACTAGCTCACTTTCCT GATATATGTATGATA GATCATTA GGTGGGCAGTTCTTCCTGCCTTCTTCACATTGTA GTTCTCAGTGTATTTTCTCTATATTCTTGATCTATACATGGACTTGGAATAAGGTGTTCACCCTGAATAAGGAGGGAGGTCAGTACATTTTTCCTACCTTAAAAATCT GAAGTATGGTTGAATATTGTATTAGATGATATTCAGATAATATTGTTAGTTTATAACAGGCC AGTTGGTTTATA CCTAAGCCACTTGGTCAATGCAAAGCTATATATTCTATAAaaaa                                                                                ]
[+] EMBL AU097607             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ctcGATGACATCAAAGATTCTCGGTGAACCTGACAATCTTGACATATTATTCGCATCCAGTGTTCCAATTTGGCAAGTCCAAAAGTNCCATTTGTTTATATCNCCATTTTTACTAGCTCACTTTCCTCGATATATGTATGATA GATCATTANGGTGGGCAGTTCTTCCTGCCTTCTTCACATTGTANGTTCTCAGTGTATTTTCTCTATATTCTTGATCTATACATGGACTTGGAATAAGGTGTTCACCCTGAATAAGGAGGGAGGTCAGTACATTTTTCCTACCTTAAAAATCTCGAAGTATGGTTGAATATTGTATTAGATGATNTTCAGATAATATTGTTAGTNTATAAAAGGCCAAGTCGGTTTATANCCTAAaaaaa                                                                                                                  ]




>consensus_15943#0
TTCCACTCCCTCAAGGCCTCAACCTACTCCAGCTATCTCGCCGTACCGCCGTCGCCGCTT
CCTCTCGCACGCGCGCCGCCATGCCCTCTTCTCTTCATTCCTCGCGCGCGCCGTCGCTGT
CGTAGCTTCGTCGTCCTTCGCCTCCCTCGTGCCCTCATCCAGCCATTGTTACTGTGCCCG
CGCTCCCGCGCCGGCAAGCGAGTCCGTCATGTCCACCAGTGAGGAGGCGGGGCTTCCAGA
TCCGGCAACAGCGGCCTCCTCGCTGGTGGATTGTCGGTTGCCCGGACGAGAGGGATGCGA
GCCACTGCACTCCTCTTCTCCTCTTTCATCTCATCTCCACGTGGATCCNGGTCGTGGCCC
TCTTCGGCAGTACAACGCTACTCTCCACTGTCTTCCTCACCCGTTCTCCATGCCGCTCAC
CTCCCCTCGGTGCCAGGATGGGGAGAGCAAGAGCAGCAGCTTGGGCACCAAAGCCACGAC
GGCGGAAGGCATGGGCTATGGCAAAGTACGGCGACGACGGCAGCAAGGCACAAACTATGG
CAAGGAAGGAAAGAAAAAAGGGAGTGAAGGCTAGATTATTCAGTACTAATGTTTAAACAT
CACCACCCAGGTGTGCAAATGGGAAATGAGCAGCGCTGTCAGAAAGAAATAGAAGACACT
AAACATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGAT
GACATCAAAGATTCTCGGTGAACCTGACAATCTTGACATATTATTGCATCCAGTGTTCCA
ATTTGGCAAGTCCAAAAGTACCATTTGTTTATATCTCCATTTTTACTAGCTCACTTTCCT
GATATATGTATGATAGATCATTAGGTGGGCAGTTCTTCCTGCCTTCTTCACATTGTAGTT
CTCAGTGTATTTTCTCTATATTCTTGATCTATACATGGACTTGGAATAAGGTGTTCACCC
TGAATAAGGAGGGAGGTCAGTACATTTTTCCTACCTTAAAAATCTGAAGTATGGTTGAAT
ATTGTATTAGATGATATTCAGATAATATTGTTAGTTTATAACAGGCCAGTTGGTTTATAC
CTAAGCCACTTGGTCAATGCAAAGCTATATATTCTATAATTCCTTTATTTCTTACCAAGG
AATGAGAATGTGCCAGTATGTTCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA

consensusID : consensus_15943#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1200
fasta sequence 
                              [GCCGGCCGGCGAGAGGCTTCTCCCGCGGCCGCACCGCCGTGGCGCTGTCCGATCCCCTGTCCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAGGAACTATTCATTAATGCGGGAGCTAGATAAAAGCTTGCAAGGTGTGCAAACGGGAAATGAGCAGCGCTGTCAGCAAGAAATAGAAGACATTAAGCATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGAAGCAATCGAGGAGCAGAAGCATTGTGTTCGAATTGCTGATGAGAAGGTGGCTTTAGCCAGT-CAGACTTATGACCTGGTTGATGCTCATATCCAACAGCTAGATCAGTTTATGAGAAAACTTGAAGAACTTCGACAAGAAAAGGAGGCAGCTACAACTGCTGCTGCTGCTGCTGCTGCGGCGGCTGCTAGTGTTGCTACAGGTACGCCTGTTGCTGCTACTGTAACAGCTAGCGCTGGTACTTCAACTGCTGACAATACTCCAAAAGGTGGAAGGTCTAGCGAAAGAGGCCGAGGGGGTCGAAAGAAGACTGCTAAGGTGCCCACTGAGCAACCAGCACCAGCCATAGATTTAGAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTGATAGGAGGTAGCTTCTTGATGATAAGTGGTGATGGACGTGGGTAACAAAAACATAGTAGCTGGTACTGTGAAATACTGTTGTAGCTTCAGTGATGATGTACATGTTACCCCTGTGTTACCGAGGAAATGCTGTAGGCGTCTTAGAGTTAGGGACCAGTCAATCATGAAGAGCAGTTGTGCCTGTATTGGTGTATCTTCATTGCCTTTTTTTGGTGGATGTGTAGGTTGTAATTGTAAT-CTAT-CCCTCCCATGTGGGCTTGATGCAATCTACACATAAATCTGTTTATAA--AAANANAAACT]

[+] EMBL AK068424             [GCCGGCCGGCGAGAGGCTTCTCCCGCGGCCGCACCGCCGTGGCGCTGTCCGATCCCCTGTCCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAGGAACTATTCATTAATGCGGGAGCTAGATAAAAGCTTGCAAGGTGTGCAAACGGGAAATGAGCAGCGCTGTCAGCAAGAAATAGAAGACATTAAGCATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGAAGCAATCGAGGAGCAGAAGCATTGTGTTCGAATTGCTGATGAGAAGGTGGCTTTAGCCAGT CAGACTTATGACCTGGTTGATGCTCATATCCAACAGCTAGATCAGTTTATGAGAAAACTTGAAGAACTTCGACAAGAAAAGGAGGCAGCTACAACTGCTGCTGCTGCTGCTGCTGCGGCGGCTGCTAGTGTTGCTACAGGTACGCCTGTTGCTGCTACTGTAACAGCTAGCGCTGGTACTTCAACTGCTGACAATACTCCAAAAGGTGGAAGGTCTAGCGAAAGAGGCCGAGGGGGTCGAAAGAAGACTGCTAAGGTGCCCACTGAGCAACCAGCACCAGCCATAGATTTAGAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTGATAGGAGGTAGCTTCTTGATGATAAGTGGTGATGGACGTGGGTAACAAAAACATAGTAGCTGGTACTGTGAAATACTGTTGTAGCTTCAGTGATGATGTACATGTTACCCCTGTGTTACCGAGGAAATGCTGTAGGCGTCTTAGAGTTAGGGACCAGTCAATCATGAAGAGCAGTTGTGCCTGTATTGGTGTATCTTCATTGCCTTTTTTTGGTGGATGTGTAGGTTGTAATTGTAAT CTAT CCCTCCCATGTGGGCTTGATGCAATCTACACATAAATCT                     ]
[+] EMBL CF295444             [GCCGGCCGGCGAGAGGCTTCTCCCGCGGCCGCACCGCCGTGGCGCTGTCCGATCCCCTGTCCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAGGAACTATTCATTAATGCGGGAGCTAGATAAAAGCTTGCAAGGTGTGCAAACGGGAAATGAGCAGCGCTGTCAGCAAGAAATAGAAGACATTAAGCATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGAAGCAATCGAGGAGCAGAAGCATTGTGTTCGAATTGCTGATGAGAAGGTGGCTTTAGCCAGT CAGACTTATGACCTGGTTGATGCTCATATCCAACAGCTAGATCAGTTTATGAGAAAACTTGAAGAACTTCGACAAGAAAAGGAGGCAGCTACAACTGCTGCTGCTGCTGCTGCTGCGGCGGCTGCTAGTGTTGCTACAGGTACGCCTGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB651986             [                                                       CCTGTCCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAGGAACTATTCATTAATGCGGGAGCTAGATAAAAGCTTGCAAGGTGTGCAAACGGGAAATGAGCAGCGCTGTCAGCAAGAAATAGAAGACATTAAGCATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATAAAGCAATCGAGGAGCAGAAGCATTGTGTTCGAATTGCTGATGAGAAGGTGGCTTTAGCCAGT CAGACTTATGACCTGGTTGATGCTCATATCCAACAGCTAGATCAGTTTATGAGAAAACTTGAAGAACTTCGACAAGAAAAGGAGGCAGCTACAACTGCTGCTGCTGCTGCTGCTGCGGCGGCTGCTAGTGTTGCTACAGGTACGCCTGTTGCTGCTACTGTAATAGCTAGCGCTGGTACTTCAACTGCTGACAATACTCCAAAAGGTGGAAGGTCTAGCGAAAGAGGCCGAGGGGGTCGAAAGAAGACTGCTAAGGTGCCCACTGAGCAACCAGCACCAGCCATAGATTTAGAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATCA                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AB110188             [                                                                 CACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAGGAACTATTCATTAATGCGGGAGCTAGATAAAAGCTTGCAAGGTGTGCAAACGGGAAATGAGCAGCGCTGTCAGCAAGAAATAGAAGACATTAAGCATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGAAGCAATCGAGGAGCAGAAGCATTGTGTTCGAATTGCTGATGAGAAGGTGGCTTTAGCCAGT CAGACTTATGACCTGGTTGATGCTCATATCCAACAGCTAGATCAGTTTATGAGAAAACTTGAAGAACTTCGACAAGAAAAGGAGGCAGCTACAACTGCTGCTGCTGCTGCTGCTGCGGCGGCTGCTAGTGTTGCTACAGGTACGCCTGTTGCTGCTACTGTAACAGCTAGCGCTGGTACTTCAACTGCTGACAATACTCCAAAAGGTGGAAGGTCTAGCGAAAGAGGCCGAGGGGGTCGAAAGAAGACTGCTAAGGTGCCCACTGAGCAACCAGCACCAGCCATAGATTTAGAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTGATAGGAGGTAGCTTCTTGATGATAAGTGGTGATGGACGTGGGTAACAAAAACATAGTAGCTGGTACTGTGAAATACTGTTGTAGCTTCAGTGATGATGTACATGTTACCCCTGTGTTACCGAGGAAATGCTGTAGGCGTCTTAGAGTTAGGGACCAGTCAATCATGAAGAGCAGTTGTGCCTGTATTGGTGTATCTTCATTGCCTTTTTTTGGTGGATGTGTAGG                                                                               ]
[+] EMBL BP184769             [                                                                 CACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAGGAACTATTCATTAATGCGGGAGCTAGATAAAAGCTTGCAAGGTGTGCAAACGGGAAATGAGCAGCGCTGTCAGCAAGAAATAGAAGACATTAAGCATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGAAGCAATCGAGGAGCAGAAGCATTGTGTTCGAATTGCTGATGAGAAGGTGGCTTTAGCCAGT CAGACTTATGACCTGGTTGATGCTCATATCCAACAGCTAGATCAGTTTATGAGAAAACTTGAAGAACTTCGACAAGAAAAGGAGGCAGCTACAACTGCTGCTGCTGCTGCTGCTGCGGCGGCTGCTAGTGTTGCTACAGGTACGCCTGTTGCTGCTACTGTAACAGCTAGCGCTGGTACTTCAACTGCTGACAATACTCCAAAAGGTGGAAGGTCTAGCGAAAGAGGCCGAGGGGGTCGAAAGAAGACTGCTAAGGTGCCCACTGAGCAACCAGCACCAGCCATAGATTTAGAACTGCCTGTGGATCCTAACGAACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL D42628               [                                                                            CATGTCCAGGTCAGGGGGCGC  CNACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGC GCAAAGGAACTATTCATTAATGCGGGA CTAGATAAAAGCTTGCAAGGTGTGCAAACGGGAAATGAGCAGC CTGTCAGCAAGAAATAGAAGACATTAAGCATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGAAGCAATCGAGGAGCAGAAGCATTGTGTTCGAATTGCTGATGAGAAGGTGGCTTTA  NAGTCCAGACTTATGACCTGGTTGATGCTCATATCCAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AY224545             [                                                                                                                                  CTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAGGAACTATTCATTAATGCGGGAGCTAGATAAAAGCTTGCAAGGTGTGCAAACGGGAAATGAGCAGCGCTGTCAGCAAGAAATAGAAGACATTAAGCATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGAAGCAATCGAGGAGCAGAAGCATTGTGTTCGAATTGCTGATGAGAAGGTGGCTTTAGCCAGT CAGACTTATGACCTGGTTGATGCTCATATCCAACAGCTAGATCAGTTTATGAGAAAACTTGAAGAACTTCGACAAGAAAAGGAGGCAGCTACAACTGCTGCTGCTGCTGCTGCTGCGGCGGCTGCTAGTGTTGCTACAGGTACGCCTGTTGCTGCTACTGTAACAGCTAGCGCTGGTACTTCAACTGCTGACAATACTCCAAAAGGTGGAAGGTCTAGCGAAAGAGGCCGAGGGGGTCGAAAGAAGACTGCTAAGGTGCCCACTGAGCAACCAGCACCAGCCATAGATTTAGAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAA                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AY224464             [                                                                                                                                  CTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAGGAACTATTCATTAATGCGGGAGCTAGATAAAAGCTTGCAAGGTGTGCAAACGGGAAATGAGCAGCGCTGTCAGCAAGAAATAGAAGACATTAAGCATGGACTTGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGAAGCAATCGAGGAGCAGAAGCATTGTGTTCGAATTGCTGATGAGAAGGTGGCTTTAGCCAGT CAGACTTATGACCTGGTTGATGCTCATATCCAACAGCTAGATCAGTTTATGAGAAAACTTGAAGAACTTCGACAAGAAAAGGAGGCAGCTACAACTGCTGCTGCTGCTGCTGCTGCGGCGGCTGCTAGTGTTGCTACAGGTACGCCTGTTGCTGCTACTGTAACAGCTAGCGCTGGTACTTCAACTGCTGACAATACTCCAAAAGGTGGAAGGTCTAGCGAAAGAGGCCGAGGGGGTCGAAAGAAGACTGCTAAGGTGCCCACTGAGCAACCAGCACCAGCCATAGATTTAGAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAA                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CF307427             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCTACAACTGCTGCTGCTGCTGCTGCTGCGGCGGCTGCTAGTGTTGCTACAGGTACGCCTGTTGCTGCTACTGTAACAGCTAGCGCTGGTACTTCAACTGCTGACAATACTCCAAAAGGTGGAAGGTCTAGCGAAAGAGGCCGAGGGGGTCGAAAGAAGACTGCTAAGGTGCCCACTGAGCAACCAGCACCAGCCATAGATTTAGAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTGATAGGAGGTAGCTTCTTGATGATAAGTGGTGATGGACGTGGGTAACAAAAACATAGTAGCTGGTACTGTGAAATACTGTTGTAGCTTCAGTGATGATGTACATGTTACCCCTGTGTTACCGAGGAAATGCTGTAGGCGTCTTAGAGTTAGGGACCAGTCAATCATGAAGAGCAGTTGTGCCTGTATTGGTGTATCTTCATTGCCTTTTTTTGGTGGATGTGTAGGTTGTAATTGTAAT CTAT CCCTCCCATGTGGGCTTGATGCAATCTACACATAAATCTGTTTATAA             ]
[+] EMBL CA767279             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAGACTGCTAAGGTGCCCACTGAGCAACC GCACCAGCCATAGATNTAGAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTCTGCAACCAAGCCAGCTACNGAGAGATGGTCGCATGCGACANTAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGCATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAANGTGATCAACCCTTGATAGGAGGTAGCTTCTTGATGATAAGTGGTGATGGACGTGGGTAACAAAAACATAGTAGCTGGTACTGTGAAATACTGTTGTAGCTTCAGTGATGATGTACATGTTACCCCTGTGTTACCGANGAAATGCTGTAGGCGNCTTANAGNTAGGGACCAGTCAATCATGAANAGCAGTTGTGCCTGTATTGGNGTATCTTCATTGCCTTTTTTTGGTGGATGTGTAGGTTGNAATTGTAATCCTATCCCCTCCCATGTGCGCTTGATGCNATCTACACANAAATCTGTTCAAAA  AAANANAAACT]
[-] EMBL CF295443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CACCAGCCATAGATTTAGAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTTTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTGATAGGAGGTAGCTTCTTGATGATAAGTGGTGATGGACGTGGGTAACAAAAACATAGTAGCTGGTACTGTGAAATACTGTTGTAGCTTCAGTGATGATGTACATGTTACCCCTGTGTTACCGAGGAAATGCTGTAGGCGTCTTAGAGTTAGGGACCAGATAATCATGAAGAGCAGTTGTGCCTGTATTGGTGTATCTTCATTGCCTTTTTTTGGTGGATGTGTAGGTTGTAATTGTAAT CTAT CCCTCCCATGTGGGCTTGATGCAATCTACACATAAATCTGTTTATAA  AAA        ]
[+] EMBL AU089818             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTGGATCCTAACGAACCAACATATTGCCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTGATAGGAGGTAGCTTCTTGATGATAAGTGGTGATGGACGTGGGTAACAAAAACATAGTAGCTGGTACTGTGAAATACTGTTGTAGCTTCAGTGATGATGTACATGTTACCCCTGTGTTACCGAGGAAATGCTGTAGGCGTCTTAGAGTTAGGGACCAGTCAATCATGAAGAGCAGTTGTGCCTGTATTGGTGTATCTTCATTGCCTTTTTTTGGTGGATGTGTAGGTTGTAATTGTAAT CTAT CCCTCCCATGTGGGCTTGATGCAATCTACACATAAATCTGTTTATAACTAAAAAAAA   ]
[+] EMBL OSC8291              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACATATTGCCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCG CAATAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAA GGGAAGTGGTATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTGATAGGAGGTAGCTTCTTGATGATAAGTGGTGATGGACGTGGGTAACANAAACATAGTAGCTGGTACTGTGAAATACTGTTGTAGCTTCAGTGATGATGTACATGNTACCCCTGTGTTACCGAGGAAATGCTGTAGGCGTCTTAGAGTTAGGGACCAGTCANTCATGAAGAGCAGTTGTGCCTGTATTGGTGTATCTTCATTGCCTTTTTTTGGTGGATGTGAAGGTTG AATTGTAAT CTNT CCCTCCCATGTGG                                               ]




>consensus_15943#1
GCCGGCCGGCGAGAGGCTTCTCCCGCGGCCGCACCGCCGTGGCGCTGTCCGATCCCCTGT
CCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGC
CATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAG
GAACTATTCATTAATGCGGGAGCTAGATAAAAGCTTGCAAGGTGTGCAAACGGGAAATGA
GCAGCGCTGTCAGCAAGAAATAGAAGACATTAAGCATGGACTTGAATCTGGAAGTATTAC
ATATGACCCGGCAAAGCTTAAATTTTCTGATGAAGCAATCGAGGAGCAGAAGCATTGTGT
TCGAATTGCTGATGAGAAGGTGGCTTTAGCCAGTCAGACTTATGACCTGGTTGATGCTCA
TATCCAACAGCTAGATCAGTTTATGAGAAAACTTGAAGAACTTCGACAAGAAAAGGAGGC
AGCTACAACTGCTGCTGCTGCTGCTGCTGCGGCGGCTGCTAGTGTTGCTACAGGTACGCC
TGTTGCTGCTACTGTAACAGCTAGCGCTGGTACTTCAACTGCTGACAATACTCCAAAAGG
TGGAAGGTCTAGCGAAAGAGGCCGAGGGGGTCGAAAGAAGACTGCTAAGGTGCCCACTGA
GCAACCAGCACCAGCCATAGATTTAGAACTGCCTGTGGATCCTAACGAACCAACATATTG
CCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGAT
CGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTG
CCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTG
ATAGGAGGTAGCTTCTTGATGATAAGTGGTGATGGACGTGGGTAACAAAAACATAGTAGC
TGGTACTGTGAAATACTGTTGTAGCTTCAGTGATGATGTACATGTTACCCCTGTGTTACC
GAGGAAATGCTGTAGGCGTCTTAGAGTTAGGGACCAGTCAATCATGAAGAGCAGTTGTGC
CTGTATTGGTGTATCTTCATTGCCTTTTTTTGGTGGATGTGTAGGTTGTAATTGTAATCT
ATCCCTCCCATGTGGGCTTGATGCAATCTACACATAAATCTGTTTATAAAAANANAAACT

consensusID : consensus_15943#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 441
fasta sequence 
                              [CNGNGACGCGTGGGNAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTGATAGGAGGTAGCTTCTTGATGATAAGTGGTGATGGACGTGGGTAACAAAAACATAGTAGCTGGTACTGTGAAATACTGTTGTAGCTTCAGTGATGATGTACATGTTACCCCTGTGTTACCGAGGAAATGCTGTAGGCGTCTTAGAGTTAAGGGACCAGTCAATCATGAAGAGCAGTTGTGCCTGTATTGGTGNATCTTCATTGCCTTTTTTT]

[+] EMBL OSS16469A            [CNGNGACGCGTGGGNAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTGCCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTGATAGGAGGTAGCTTCTTGATGATAAGTGGTGATGGACGTGGGTAACAAAAACATAGTAGCTGGTACTGTGAAATACTGTTGTAGCTTCAGTGATGATGTACATGTTACCCCTGTGTTACCGAGGAAATGCTGTAGGCGTCTTAGAGTTAAGGGACCAGTCAATCATGAAGAGCAGTTGTGCCTGTATTGGTGNATCTTCATTGCCTTTTTTT]




>consensus_15943#2
CNGNGACGCGTGGGNAACTGCCTGTGGATCCTAACGAACCAACATATTGCCTCTGCAACC
AAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGATCGAATGGTATC
ACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTGCCCAAGTTGCA
TTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTGATAGGAGGTAG
CTTCTTGATGATAAGTGGTGATGGACGTGGGTAACAAAAACATAGTAGCTGGTACTGTGA
AATACTGTTGTAGCTTCAGTGATGATGTACATGTTACCCCTGTGTTACCGAGGAAATGCT
GTAGGCGTCTTAGAGTTAAGGGACCAGTCAATCATGAAGAGCAGTTGTGCCTGTATTGGT
GNATCTTCATTGCCTTTTTTT

consensusID : consensus_15943#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 225
fasta sequence 
                              [CTTCTCCTCTTTCATCTCATCTCCACGTGGATCCGGTCGTGGCCCTNNTCGGCAGTACAACGCTACTCTCCACTGTCTTNTGGCACCCGTNCNCCATGCCGCTCANNNNNNNTNGNTGCCAGGATGGGGAGAGCAANAGCAGNAGCTTGGGCACCAAAGCCACGACGGCGGAAGGNATGGGCTATNGCAAAGNACGGCGACGACGGCAGCAAGGNACAAANTATG]

[+] EMBL AU068524             [CTTCTCCTCTTTCATCTCATCTCCACGTGGATCCGGTCGTGGCCCTNNTCGGCAGTACAACGCTACTCTCCACTGTCTTNTGGCACCCGTNCNCCATGCCGCTCANNNNNNNTNGNTGCCAGGATGGGGAGAGCAANAGCAGNAGCTTGGGCACCAAAGCCACGACGGCGGAAGGNATGGGCTATNGCAAAGNACGGCGACGACGGCAGCAAGGNACAAANTATG]




>consensus_15943#3
CTTCTCCTCTTTCATCTCATCTCCACGTGGATCCGGTCGTGGCCCTNNTCGGCAGTACAA
CGCTACTCTCCACTGTCTTNTGGCACCCGTNCNCCATGCCGCTCANNNNNNNTNGNTGCC
AGGATGGGGAGAGCAANAGCAGNAGCTTGGGCACCAAAGCCACGACGGCGGAAGGNATGG
GCTATNGCAAAGNACGGCGACGACGGCAGCAAGGNACAAANTATG

consensusID : consensus_15943#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 196
fasta sequence 
                              [ACGTGCATGCCGCGTACGTAGCTTGGATCTCTAGAGCGGCGCACCGCGTGGCGCTGTCCGATCCCCTGTCCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAGGGAAGCT]

[+] EMBL BU667251             [ACGTGCATGCCGCGTACGTAGCTTGGATCTCTAGAGCGGCGCACCGCGTGGCGCTGTCCGATCCCCTGTCCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAGGGAAGCT]




>consensus_15943#4
ACGTGCATGCCGCGTACGTAGCTTGGATCTCTAGAGCGGCGCACCGCGTGGCGCTGTCCG
ATCCCCTGTCCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCC
GGTAAACGCCATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTAT
GCTGCAAAGGGAAGCT

consensusID : consensus_15943#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 158
fasta sequence 
                              [GGCGCTGTCCGATCCCCTGTCCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGAGGACTTTCAGAGAGCCAGATGGTTGAAGCAATTGCCAGTCAGTAATGCATGCAAAAAGGGG]

[+] EMBL BU667147             [GGCGCTGTCCGATCCCCTGTCCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGAGGACTTTCAGAGAGCCAGATGGTTGAAGCAATTGCCAGTCAGTAATGCATGCAAAAAGGGG]




>consensus_15943#5
GGCGCTGTCCGATCCCCTGTCCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGC
AACCCATCTCCGGTAAACGCCATGGGGTTCCTCGAGAGGACTTTCAGAGAGCCAGATGGT
TGAAGCAATTGCCAGTCAGTAATGCATGCAAAAAGGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      GCCGGCCGGCGAGAGGCTTCTCCCGCGGCCGCACCGCCGTGGCGCTGTCCGATCCCCTGT 60
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      ------------------------------------------------------------
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      CCCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGC 120
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      ------------------------------------------------------------
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      CATGGGGTTCCTCGAGGACTTTCAAGCCAGTGTTGAAGCATTGCCAGCTATGCTGCAAAG 180
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      ------------------------------------------------------------
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      GAACTATTCATTAATGCGGGAGCTAGATAAAAGCTTGCAAGGTGTGCAAACGGGAAATGA 240
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      ------------------------------------------------------------
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      GCAGCGCTGTCAGCAAGAAATAGAAGACATTAAGCATGGACTTGAATCTGGAAGTATTAC 300
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      ------------------------------------------------------------
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      ATATGACCCGGCAAAGCTTAAATTTTCTGATGAAGCAATCGAGGAGCAGAAGCATTGTGT 360
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      ------------------------------------------------------------
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      TCGAATTGCTGATGAGAAGGTGGCTTTAGCCAGTCAGACTTATGACCTGGTTGATGCTCA 420
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      ------------------------------------------------------------
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      TATCCAACAGCTAGATCAGTTTATGAGAAAACTTGAAGAACTTCGACAAGAAAAGGAGGC 480
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      ------------------------------------------------------------
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      AGCTACAACTGCTGCTGCTGCTGCTGCTGCGGCGGCTGCTAGTGTTGCTACAGGTACGCC 540
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      -------------------------------------------TTCCACTCCCTCAAGGC 17
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      TGTTGCTGCTACTGTAACAGCTAGCGCTGGTACTTCAACTGCTGACAATACTCCAAAAGG 600
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      CTCAACCTACTCCAGCTATCTCGCCGTACCGCCGTCGCCGCTTCCTCTCGCACGCGCGCC 77
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      TGGAAGGTCTAGCGAAAGAGGCCGAGGGGGTCGAAAGAAGACTGCTAAGGTGCCCACTGA 660
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      GCCATGCCCTCTTCTCTTCATTCCTCGCGCGCGCCGTCGCTGTCGTAGCTTCGTCGTCCT 137
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      GCAACCAGCACCAGCCATAGATTTAGAACTGCCTGTGGATCCTAACGAACCAACATATTG 720
consensus_15943#2      -----------CNGNGACGCGTGGGNAACTGCCTGTGGATCCTAACGAACCAACATATTG 49
consensus_15943#0      TCGCCTCCCTCGTGCCCTCATCCAGCCATTGTTACTGTGCCCGCGCTCCCGCGCCGGCAA 197
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      CCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGAT 780
consensus_15943#2      CCTCTGCAACCAAGTCAGCTACGGAGAGATGGTCGCATGCGACAATAATGATTGCAAGAT 109
consensus_15943#0      GCGAGTCCGTCATGTCCACCAGTGAGGAGGCGGGGCTTCCAGATCCGGCAACAGCGGCCT 257
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      -------------------------------------------------ACGTGCATGCC 11
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      CGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTG 840
consensus_15943#2      CGAATGGTATCACTTTGGGTGCGTCGGCGTGAAAGAGCATCCGAAGGGGAAGTGGTATTG 169
consensus_15943#0      CCTCGCTGGTGGATTGTCGGTTGCCCGGACGAGAGGGATGCGAGCCACTGCACTCCTCTT 317
consensus_15943#3      ---------------------------------------------------------CTT 3
                                                                                   

consensus_15943#4      GCGTACGTAGCTTGGATCTCTAGAGCGGCGCACCGCGTGGCGCTGTCCGATCC-CCTGTC 70
consensus_15943#5      --------------------------------------GGCGCTGTCCGATCC-CCTGTC 21
consensus_15943#1      CCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTG 900
consensus_15943#2      CCCAAGTTGCATTGGATTCCAAAAGAAGCGAAAAGGAAAGTGAAATGTGATCAACCCTTG 229
consensus_15943#0      CTCCTCTTTCATCTCATCTCCACGTGGATCCNGGTCGTGGCCCTCTTCGGCAGTACAACG 377
consensus_15943#3      CTCCTCTTTCATCTCATCTCCACGTGGATCCGG-TCGTGGCCCTNNTCGGCAGTACAACG 62
                                                              *        *      *    

consensus_15943#4      CCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCC 130
consensus_15943#5      CCAGCACCCTCGTCGCATGTCCAGGTCAGGGGGCGCAGCAACCCATCTCCGGTAAACGCC 81
consensus_15943#1      ATAGGAG----GTAGCTTCTTGATGATAAGTGGTG-ATGGACGTGGGTAACAAAAACATA 955
consensus_15943#2      ATAGGAG----GTAGCTTCTTGATGATAAGTGGTG-ATGGACGTGGGTAACAAAAACATA 284
consensus_15943#0      CTACTCTC--CACTGTCTTCCT-CACCCGTTCTCCATGCCGCTCACCTCCCCTCGGTGCC 434
consensus_15943#3      CTACTCTC--CACTGTCTTNTGGCACCCGTNCNCCATGCCGCTCANNNNNNNTNGNTGCC 120
                         *           *  *                       *                  

consensus_15943#4      ATGG--GGTTCCTCGAG---GACTTTCA---AGCCAGT--GTTGAAGCA-TTGCCAGCTA 179
consensus_15943#5      ATGG--GGTTCCTCGAGAG-GACTTTCAGAGAGCCAGATGGTTGAAGCAATTGCCAGTCA 138
consensus_15943#1      GTAGCTGGTACTGTGAAA--TACTGTTGTAGCTTCAGT--GATGATGTACATGTTACCCC 1011
consensus_15943#2      GTAGCTGGTACTGTGAAA--TACTGTTGTAGCTTCAGT--GATGATGTACATGTTACCCC 340
consensus_15943#0      AGGATGGGGAGAGCAAGAGCAGCAGCTTGGGCACCAAAGCCACGACG---GCGGAAGGCA 491
consensus_15943#3      AGGATGGGGAGAGCAANAGCAGNAGCTTGGGCACCAAAGCCACGACG---GCGGAAGGNA 177
                             **       *                  **       ** *     *  *    

consensus_15943#4      ----TGC-TGCAAAGGGAAGCT-------------------------------------- 196
consensus_15943#5      GTAATGCATGCAAAAAGGGG---------------------------------------- 158
consensus_15943#1      T--GTGTTACCGAGGAAATGCTGTAGGCGTCTTAGAGTTA-GGGACCAGTCAATCATGAA 1068
consensus_15943#2      T--GTGTTACCGAGGAAATGCTGTAGGCGTCTTAGAGTTAAGGGACCAGTCAATCATGAA 398
consensus_15943#0      TGGGCTATGGCAAAGTACGGCGACGACGGCAGCAAGGCACAAACTATGGCAAGGAAGGAA 551
consensus_15943#3      TGGGCTATNGCAAAGNACGGCGACGACGGCAGCAAGGNACAAANTATG------------ 225
                                 * *      *                                        

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      GAGCAGTTGTGCCTGTATTGGTGTATCTTCATTGCCTTTTTTTGGTGGATGTGTAGGTTG 1128
consensus_15943#2      GAGCAGTTGTGCCTGTATTGGTGNATCTTCATTGCCTTTTTTT----------------- 441
consensus_15943#0      AGAAAAAAGGGAGTGAAGGCTAGATTATTCAGTACTAATGTTTAAACATCACCACCCAGG 611
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      TAATTGTAATCTATCCCTCCCATGTGGGCTTGATGCAATCTACACATAAATCTGTTTATA 1188
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      TGTGCAAATGGGAAATGAGCAGCGCTGTCAGAAAGAAATAGAAGACACTAAACATGGACT 671
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      AAAANANAAACT------------------------------------------------ 1200
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      TGAATCTGGAAGTATTACATATGACCCGGCAAAGCTTAAATTTTCTGATGACATCAAAGA 731
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      ------------------------------------------------------------
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      TTCTCGGTGAACCTGACAATCTTGACATATTATTGCATCCAGTGTTCCAATTTGGCAAGT 791
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      ------------------------------------------------------------
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      CCAAAAGTACCATTTGTTTATATCTCCATTTTTACTAGCTCACTTTCCTGATATATGTAT 851
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      ------------------------------------------------------------
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      GATAGATCATTAGGTGGGCAGTTCTTCCTGCCTTCTTCACATTGTAGTTCTCAGTGTATT 911
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      ------------------------------------------------------------
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      TTCTCTATATTCTTGATCTATACATGGACTTGGAATAAGGTGTTCACCCTGAATAAGGAG 971
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      ------------------------------------------------------------
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      GGAGGTCAGTACATTTTTCCTACCTTAAAAATCTGAAGTATGGTTGAATATTGTATTAGA 1031
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      ------------------------------------------------------------
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      TGATATTCAGATAATATTGTTAGTTTATAACAGGCCAGTTGGTTTATACCTAAGCCACTT 1091
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ------------------------------------------------------------
consensus_15943#5      ------------------------------------------------------------
consensus_15943#1      ------------------------------------------------------------
consensus_15943#2      ------------------------------------------------------------
consensus_15943#0      GGTCAATGCAAAGCTATATATTCTATAATTCCTTTATTTCTTACCAAGGAATGAGAATGT 1151
consensus_15943#3      ------------------------------------------------------------
                                                                                   

consensus_15943#4      ----------------------------------------------------
consensus_15943#5      ----------------------------------------------------
consensus_15943#1      ----------------------------------------------------
consensus_15943#2      ----------------------------------------------------
consensus_15943#0      GCCAGTATGTTCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1203
consensus_15943#3      ----------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)