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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16672#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1206 fasta sequence
[CTACGCAACGGCATGACAGTGTTTTTTTTTTTTTTTAGCGATATGAGTAGGCATATTTTCTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAGACACACATGTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT-AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA-T-GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA-GGTATACTGTTTCC-TGCCACTCAAATGAA-GCA-TGGT-AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG-TT-TTGCAACAACCAGCACAACAACTG-CAATGGTGTTGAGG-AA-GAG-CATAGGATGTTGATAATCTGTCGTGTG-CAAGG-CTATCAAGTATAGG-ACCAAAGGAACCACGG-TCAG-AAA-TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACGCCATGCCGGGGGTGCAGCCGAAGACGGAGAGGACGAGCAGCCAGGAGAAGAAGAGGATGAGGATGTAGGTCGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAGAAGGCGAGGAGAAGGTTCAAAGATGGAGGCGAAAAGAAAAAACGCGAGGGGGAGAGGAGAGGAGACCGACGGGCTGGCTGCCTGGCTGTGCGCCTGTGCGGCTGTGTGCCGCGACGCACACCGCGCCACCAATGCCGTCACACCGCA]
[+] EMBL CF295436 [CTACGCAACGGCATGACAGTGTTTTTTTTTTTTTTTAGCGATATGAGTAGGCATATTGTCTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAGACACACATGTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG ATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAG AAATTTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAAT ]
[+] EMBL CF278130 [ TTTTTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAGACACACATGTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAAAGCCTAAAGAAGTGTGTTCACTAAATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAAAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAG AAA TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAAT ]
[+] EMBL CF279517 [ TTTTTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAAACACACATGTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAAAGCCTAAAGAAGTGTGTTCACTAAATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAAAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAGNAAA TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCC ]
[-] EMBL AK064998 [ CTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAGACACACATGTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAG AAA TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACGCCATGCCGGGGGTGCAGCCGAAGACGGAGAGGACGAGCAGCCAGGAGAAGAAGAGGATGAGGATGTAGGTCGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAGAAGGCGAGGAGAAGGTTCAAAGATGGAGGCGAAAAGAAAAAACGCGAGGGGGAGAGGAGAGGAGACCGACGGGCTGGCTGCCTGGCTGTGCGCCTGTGCGGCTGTGTGCCGCGACGCACACCGCGCCACCAATGCCGTCACACCGCA]
[-] EMBL CF314783 [ TATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTTCTACTC ]
[-] EMBL BM420763 [ ttTAACAACATTAACAGCAAAATAAAGTTTC TTTNGGGGGGATNACGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCAGTGGCCTTTAGCTCTGTACAAGGATTACATGTCATCTACTAACAGCTCTTAAAAATTACTCACTCTGGTTATCCATTCAGAACTAGGGTATACTGTTTCCGTGCCACTCAAATGAAGGCAGTGGTCAGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAGCTTCTTGCAACAACCAGCACAACAACTGCCAACGGTGTTGAGGCAACGAGCCATAGGATGTTGATAATCTGTCGTGTGCCGAGGCCTATCAAGTATAGGCACCAAAGGAACCACGGCTCAG AAA TTTTCTG TGCGAGTAAGCTGNTTCCCATGGTCCATTTGCTCCCACCAAGTCAATCTATTA ]
[-] EMBL CB001012 [ ttttttTTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAG AAA TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGCGAAAAAAATGGT ]
[-] EMBL CB001032 [ ttttttTTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAG AAA TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAATGGT ]
[-] EMBL CF295435 [ CCGGGGTACATGAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAG ]
[-] EMBL CF292906 [ GAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCNCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAGAAGGCGAGGAGAAGGT ]
consensusID : consensus_16672#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1011 fasta sequence
[CTGTCACGATACGCTACGTAACGGCATGACATTGTTTTTTTTTTTTTTTTTTTTTTTTTGCAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC-AACCTGTAGGCAAATTATAAG-CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG-CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC-TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA-GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT-CAG-ATATCTG-CATT-GATTCCAAA-TATAC-GGACCTTGTGCATGTTTGGCAGCTTTGCTA-CCACTAGTACCAGAACTGCAATGGTGTTGAG-GAAAAGCATT-GGCTGTTTGTAGTC-GGTCAAGT-GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC-GAGTAAGTTGCTGCCCGTTATC-AATTT-GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG-CAGCAAATGGAGTTCCCTTCTTCCAAT-GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG-AACCACTCCGTGTTCTTGTTCACGTCC-ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG-CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGTGATGATTTTCTACTC]
[+] EMBL CF332114 [CTGTCACGATACGCTACGTAACGGCATGACATTGTTTTTTTTTTTTTTTTTTTTTTTTTGCAGGAACTGAACTCCGGTTCACCATTCTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGG ]
[-] EMBL C98223 [ TTTTTTTTTTTTTTTTTTTTTTTTTGCAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CNGTGGTGAAAAAGTTTAGTTTTTTCACTACTTTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACAGGAAGCTTGTGCCCTGATGTTCTTCATATGGTCCTCCAGTATATCTGCCATTGGATTCCAAATTATACGGGACCTTGTGCATGTTTGGCAGCTTTGNTACCCACTAGGACCAGAACTGCAATGGTGTTGAGNGAAAAGCATTGGGCTGTTTGTAGTCGGGCCAANTGGTGAC ]
[+] EMBL CF295136 [ TTTTTTTTTTTTTTTGCAAGTTCTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTTTTCACTCCCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATTCTTTTTCCTCC AACCTGTAGGCTATTTATAAG CTACAGTAACATTTTCTTTTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAAATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGC ]
[+] EMBL CF334716 [ TTTTTTTTTGCAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGG ]
[+] EMBL CF292006 [ TTTTTTGCAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTCTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACCAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTT ]
[-] EMBL AU083393 [ TTTTTGCAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGG ]
[-] EMBL AK099046 [ AACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGAT ]
[-] EMBL AK061880 [ TCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGG ]
[-] EMBL AU083405 [ tTTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGNCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGNTATC AATTTGGTCCCCACCAAGTTAGTCNGTTGTAGATGCCTTGGTCATNAGCCAGCAA ]
[-] EMBL AU083386 [ ttttttTATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGAAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAATGGGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCNGGGGAACAGGCGGAGACCGANAGGACGAGCAGCCAGGCCAAGAANAGGAGGAG ]
[-] EMBL C27905 [ GCAGAAGCCCCCAAACCTGNAGGCAAATTATAAGCCTACAGTANCATTTACAGGTTCCTCCTACACCTATGCACATACTACAGATTGCCAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGANGCGATCAGGTACAGCACCACAGGT ]
[+] EMBL CF281974 [ AAACACACA CAAGCTTGTGCCCTGATGTTCTCCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTCTGCTA CCACTAGTACCAGAACTGCAATGGTGCTGAG GAAAAGCTTT GGCTGTCTGTAGTCag ]
[-] EMBL CF332113 [ TATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTG TGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGATCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTCCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCGCCCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGAT ]
[-] EMBL CF292005 [ CAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGTGATGATTTTCTACTC]
[-] EMBL AU198157 [ A CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCC ]
[-] EMBL CF334715 [ TTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGTGATGATgatacccta]
[-] EMBL C93537 [ CAAAT TTNACCCGATCAGGTACAGCACNACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGAATGTAGGTGGTCCACACCCCGGGGTACATG ANACACTCCGTGTTCTTGTTCACGTCCNANCG NGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGT ]
[-] EMBL AW069965 [ gccgAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACAC ]
[-] EMBL C74842 [ ATTACGGAGTAA TTGCTTCCCGTTATCAAATTT GTTCCCCACAAATTAGTCTGTTGTAGATGCNTTGGTCATCAG CAGCAAATGGAG TCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGANGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATGAAACCACTCCGTGTTCTTGTTCACGTCCAACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGA ]
[-] EMBL AU093274 [ AAGTTAGTCTGTTGAAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGT GGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGT ]
[-] EMBL AU069352 [ CCTTGGTCATCAG CAGCAAATGGAG TCCCTTCTTCCAAT GGAAGAAGTGATAANTGATGGCGAAGTGGCCGAGGTTGACGACGGTCCACGCGATCCCGGGGAAGCAGGCGGAGACGNAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AAACACTCCGTGTTCTTGTTCACGTCC AACCGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGT ]
[-] EMBL OSC1581 [ GAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGNCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AAACACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTG ]
consensusID : consensus_16672#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 967 fasta sequence
[ACCACCCAGTATGACAAAGAACATATGACAATTGTCAACCCATAATTCTATCAATGCAACGTTTGTCAATTAGGACAATCAAGAAACGTATGCAAGTCCACAAATAAAGCACGACGCATAACATAATCTGGATTTAACATTTAACATTTTTTTTAGCGCAATGATGTGAACAGTGAACAGATTCTTGCATCAACTCACTGCTAGTTGTTTTAGACTGAAGGCGTAGTTGGACTTGAGTTCAACCTGAACAGATTGTACATACACCAAGAAATCTCTTTTGACTTTTGCAAGGTTGGAATATACTTGAGACAAACTAGCAGAGAAAAAGGTAAGGAAGATTATTCCCTGATATTTCAGCTTGCGAAATCGACGCTTCTTTGAGAAAAAGATATTTGTGAAGAAGAGAAAAATTATCTCCGCAAGTTGGTGTGTTCCTCGATTCCTTCCGCCACTGTATCTCATCAAAGATAGTACCAAAGAAGAACAGCAGCAGAAGCGACTCTCAGATCGGGTGCGTGAGACCAACACGCGACAGGATAGGACTAGCTAGCGGCGCTAATCAAGAACGGATCGGACTAATGAAAGAAGGAGCAAACTCGCCGTCAATGAATGGATGGATGGATGAATGAATCGGGGGGCGAGGCGGGACGTACGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCACGTCCACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCGCCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGT]
[-] EMBL AK109311 [ACCACCCAGTATGACAAAGAACATATGACAATTGTCAACCCATAATTCTATCAATGCAACGTTTGTCAATTAGGACAATCAAGAAACGTATGCAAGTCCACAAATAAAGCACGACGCATAACATAATCTGGATTTAACATTTAACATTTTTTTTAGCGCAATGATGTGAACAGTGAACAGATTCTTGCATCAACTCACTGCTAGTTGTTTTAGACTGAAGGCGTAGTTGGACTTGAGTTCAACCTGAACAGATTGTACATACACCAAGAAATCTCTTTTGACTTTTGCAAGGTTGGAATATACTTGAGACAAACTAGCAGAGAAAAAGGTAAGGAAGATTATTCCCTGATATTTCAGCTTGCGAAATCGACGCTTCTTTGAGAAAAAGATATTTGTGAAGAAGAGAAAAATTATCTCCGCAAGTTGGTGTGTTCCTCGATTCCTTCCGCCACTGTATCTCATCAAAGATAGTACCAAAGAAGAACAGCAGCAGAAGCGACTCTCAGATCGGGTGCGTGAGACCAACACGCGACAGGATAGGACTAGCTAGCGGCGCTAATCAAGAACGGATCGGACTAATGAAAGAAGGAGCAAACTCGCCGTCAATGAATGGATGGATGGATGAATGAATCGGGGGGCGAGGCGGGACGTACGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCACGTCCACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCGCCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGT]
consensusID : consensus_16672#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 756 fasta sequence
[CTGTGAGTCTGTGACTATGCGGGTAACAAACATCAGAGCTATATGTTAATTCCTTGCATACCTACTGAAAGTCTGAAACCATTTACTAGTTACTACTTACTGGCTATGTAGAATCAATCATCATCCATATTTTCAATGCTGTAGTGAAAAGGAAAATCAATCGCAACAGATTTATTCTTACAGGACCAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACGCCATGCCGGGGGTGCAGCCGAAGACGGAGAGGACGAACAACCAGGAGAAGAAGAGGATGAGGATGTAGGTCGTCCACACACAAGGGTACATGAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAGAAGGCGAGGAGAAGGTTCAAAAATGGAGGCGAAAAG]
[-] EMBL CF307515 [CTGTGAGTCTGTGACTATGCGGGTAACAAACATCAGAGCTATATGTTAATTCCTTGCATACCTACTGAAAGTCTGAAACCATTTACTAGTTACTACTTACTGGCTATGTAGAATCAATCATCATCCATATTTTCAATGCTGTAGTGAAAAGGAAAATCAATCGCAACAGATTTATTCTTACAGGACCAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACGCCATGCCGGGGGTGCAGCCGAAGACGGAGAGGACGAACAACCAGGAGAAGAAGAGGATGAGGATGTAGGTCGTCCACACACAAGGGTACATGAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTG ]
[-] EMBL CF278131 [ GAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAGAAGGCGAGGAGAAGGTTCAAAAATGGAGGCGAAAAG]
consensusID : consensus_16672#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 516 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGATAAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCATGCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTTTTAAAAACTACTCACTCTGGTTATCCATTCAAAACTAGGTATACTGTTTCCTGCCACTCAAATGAAGCATGGTAGTGATAACAAACCGTGGGATGCTGCCGCCTATTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAGTTTTGCAACAACCAGCACAACAACTGCAATGGTGTTGAGGAAAAACGTAGGATGTTGATAATCTGTCGTGTGCAAGGCTATCAAGTATAGGACCAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTAT]
[+] EMBL CF292905 [TTTTTTTTTTTTTTTTTTTTTTTTTTTACCCTTGAACAAGAGCACATTTTTAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGGGGGATAAAAGCCTAAAAAAGTGTGTTCACTAAATGCTGAACAACATCATTTCCATGCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTTTTAAAAACTACTCACTCTGGTTATCCATTCAAAACTAGGTATACTGTTTCCTGCCACTCAAATGAAGCATGGTAGTGATAACAAACCGTGGGATGCTGCCGCCTATTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAGTTTTGCAACAACCAGCACAACAACTGCAATGGTGTTGAGGAAAAACGTAGGATGTTGATAATCTGTCGTGTGCAAGGCTATCAAGTATAGGACCAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTAT]
[-] EMBL CF337175 [ gtgTTTTTTTTTTTTTTTTTTTTTACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGATAAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCATGCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGC ]
[-] EMBL AU063472 [ nTTTTTTNTTTTTTTACACTTGAACAAGAGNACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGATAAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATNATTTCCATGCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTNAAAACTACTCACTCTGGTTATCCATTCAGAACTAGGTATACTGTT ]
consensusID : consensus_16672#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 311 fasta sequence
[CNGNGNACGCNTGGGCTTTTTTGCAGGTACCTGATCGCTTCACACTTGACCGACTACAAACAGCCAATGCTTTTCCTCAACACCATTGCAGTTCTGGTACTAGTGGTAGCAAAGCTGCCAAACATGCACAAGGTCCGTATATTTGGAATCAATGCAGATATCTGAGGACCATATGANGAACATCAGGGCACAAGCTTCTGTGTGTTTGCAACGNGGGTCAAGNGANCTTTGTGCAAACACGGTATCTAAAGTAGTGAAANANCTAAACTTTTTCACCACTGCAATCTGTAGTNTGTGCATAGGTGTAGGNN]
[+] EMBL OS1226A [CNGNGNACGCNTGGGCTTTTTTGCAGGTACCTGATCGCTTCACACTTGACCGACTACAAACAGCCAATGCTTTTCCTCAACACCATTGCAGTTCTGGTACTAGTGGTAGCAAAGCTGCCAAACATGCACAAGGTCCGTATATTTGGAATCAATGCAGATATCTGAGGACCATATGANGAACATCAGGGCACAAGCTTCTGTGTGTTTGCAACGNGGGTCAAGNGANCTTTGTGCAAACACGGTATCTAAAGTAGTGAAANANCTAAACTTTTTCACCACTGCAATCTGTAGTNTGTGCATAGGTGTAGGNN]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16672#0 --------CTACGCAACGGCATGACAGTGTTTTTTTTTTTTTTTAGCGATATGAGTAGGC 52
consensus_16672#4 ------------------------------------------------------------
consensus_16672#3 ------------------------------------------------------------
consensus_16672#1 CTGTCACGATACGCTACGTAACGGCATGACATTGTTTTTTTTTTTTTTTTTTTTTTTTTG 60
consensus_16672#2 --------ACCACCCAGTATGACAAAGAACATATGACAATTGTCAACCCATAATTCTATC 52
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 ATATTTTCTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAGACACACAT 112
consensus_16672#4 ----------------------------------------TTTTTTTTTTTTTTTTTTTT 20
consensus_16672#3 ------------------------------------------------------------
consensus_16672#1 CAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGAT 120
consensus_16672#2 AATGCAACGTTTGTCAATTAGGACAATCAAGAAACGTATGCAAGTCCACAAATAAAGCAC 112
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 GTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCT 172
consensus_16672#4 TTTTTTTACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCT 80
consensus_16672#3 ------------------------------------------------------------
consensus_16672#1 TACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCAT 180
consensus_16672#2 GACGCATA-ACATAATCTGGATTTAACATTTAACATTTTTTTTAGCGCAATGATGTGAAC 171
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 TTTTGGTGGGATAAGAGCCTA-AAGAAGTG-TGTTCACTAGATGCTG-AACAACATCATT 229
consensus_16672#4 TTTTGGTGGGATAAGAGCCTA-AAGAAGTG-TGTTCACTAGATGCTG-AACAACATCATT 137
consensus_16672#3 ------------------------------------------------------------
consensus_16672#1 GAGCAAACATGCAGCAGCCTCCAACCTGTA-GGCAAATTATAAGCTACAGTAACATTTAC 239
consensus_16672#2 -AGTGAACAGATTCTTGCATCAACTCACTGCTAGTTGTTTTAGACTG--AAGGCGTAGTT 228
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 TCCATGCCTTTAGCTCTGTACAATGATTACATGT--CATCTACTAACAGCTCTTAAAAAC 287
consensus_16672#4 TCCATGCCTTTAGCTCTGTACAATGATTACATGT--CATCTACTAACAGCTTTTAAAAAC 195
consensus_16672#3 ------------------------------------------------------------
consensus_16672#1 AGGTTCTTCCTACACCTATGCACATACTACAGATTGCAGTGGTGAAAAAGTTTAGTTTTT 299
consensus_16672#2 GGACTTGAGTTCAACCTGAACAGATTGTACATAC---ACCAAGAAATCTCTTTTGACTTT 285
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 TACTCACTCTGGTTATCCATTCAGAACTAGGTATACTGTTTCCTGCCACTCAAATGAAGC 347
consensus_16672#4 TACTCACTCTGGTTATCCATTCAAAACTAGGTATACTGTTTCCTGCCACTCAAATGAAGC 255
consensus_16672#3 -----------------------------------------------CTGTGAGTCTGTG 13
consensus_16672#1 TCACTACTTTAGATACCGTGTTTGCACAAAGTTCGCT-TGTCCCTCGTTGCAAACACACA 358
consensus_16672#2 TGCAAGGTTGGAATAT--ACTTGAGACAAACTA----GCAGAGAAAAAGGTAAGGAAGAT 339
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 ATGGTAGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGA 407
consensus_16672#4 ATGGTAGTGATAACAAACCGTGGGATGCTGCCGCCTATTTGCCAGCATTGATTCCAAAGA 315
consensus_16672#3 ACTATGCGGGTAACAAACATCAGA--GCTATATGTTAATTCCTTGCATACCTACTGAAAG 71
consensus_16672#1 GAAGCTTGTGCCCTGATGTTCTTCATATGGTC-CTCAGATATCTGCATTGATTCCAAATA 417
consensus_16672#2 TATTCCCTGATATTTCAGCTTGCGAAATCGACGCTTCTTTGAGAAAA-AGATATTTGTGA 398
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 TCCGGACCTTGTGCATGTTCGGTAGTT--TTGCAACAACCAGCACAACAACTGCAATGGT 465
consensus_16672#4 TCCGGACCTTGTGCATGTTCGGTAGTT--TTGCAACAACCAGCACAACAACTGCAATGGT 373
consensus_16672#3 TCTGAAACCATTTACTAGTTACTACTTACTGGCTATGTAGAATCAATCATCATCCATATT 131
consensus_16672#1 TACGGACCTTGTGCATGTTTGGCAGCT--TTGCTACCACTAGTACCAGAACTGCAATGGT 475
consensus_16672#2 AGAAGAGAAAAATTATCTCCGCAAGTTGGTGTGTTCCTCGATTCCTTCCGCCACTGTA-T 457
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 GTTGAGGAAGAGCATAGGATGTTGATAATCTGTCGTGTGCAAGGCTATCAAGTATAGGAC 525
consensus_16672#4 GTTGAGGAAAAACGTAGGATGTTGATAATCTGTCGTGTGCAAGGCTATCAAGTATAGGAC 433
consensus_16672#3 TTCAATGCTGTA-GTGAAAAG--GAAAATCAATCGCA-ACAGATTTATTCT-TACAGGAC 186
consensus_16672#1 GTTGAGGAAAAGCATTGGCTGTTTGTAGTCGGTCAAGTGTGACGCGATCAGGTACAGCAC 535
consensus_16672#2 CTCATCAAAGATAGTACCAAA--GAAGAACAGCAGCAGAAGCGACTCTCAGAT-CGGGTG 514
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 CAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTG 585
consensus_16672#4 CAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTG 493
consensus_16672#3 CAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTG 246
consensus_16672#1 CACAGGTACCACAGTCAAGAACTTCCTATTACGAGTAAGTTGCTGCCCGTTATCAATTTG 595
consensus_16672#2 CGTGAGACCAACACGCGACAGGAT---AGGACTAGCTAGCGGC-GCTAATCAAGAACG-G 569
consensus_16672#5 ------------CNGNGNACGCNTGGGCTTTTTTGCAGGTACCTGATCGCTTCACACTTG 48
* * * * * *
consensus_16672#0 CTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCA---AACGGAGTTCCCTT 642
consensus_16672#4 CTCCCACCAAGTCAATCTATTAT------------------------------------- 516
consensus_16672#3 CTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCA---AACGGAGTTCCCTT 303
consensus_16672#1 TTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAGCAGCAAATGGAGTTCCCTT 655
consensus_16672#2 ATCGGACTAATGAAAGAAGGAGCAAACTCGCCGTCAATGAATGG--ATGGATGGATGAAT 627
consensus_16672#5 -----ACCGACT--ACAAACAGCCAATGCTTT--TCCTCAACACC-ATTGCAGTTCTGGT 98
** *
consensus_16672#0 -CTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACG 701
consensus_16672#4 ------------------------------------------------------------
consensus_16672#3 -CTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACG 362
consensus_16672#1 -CTTCCAATGGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACG 714
consensus_16672#2 -GAATCGGGGGGCGAGGCGGGACGT-ACGGCGAAGTGGGCGAGGTTGACGACGGTCCACG 685
consensus_16672#5 ACTAGTGGTAGCAAAGCTGCCAAACATGCACAAGGTCCGTATATTTGGAATCAATGCA-- 156
consensus_16672#0 CCATGCCGGGGGTGCAGCCGAAGACGG--AGAGGACGAGCAGCCAGGAGAAGAAGAGGAT 759
consensus_16672#4 ------------------------------------------------------------
consensus_16672#3 CCATGCCGGGGGTGCAGCCGAAGACGG--AGAGGACGAACAACCAGGAGAAGAAGAGGAT 420
consensus_16672#1 CGATCCCGGGGGAGCAGGCGGAGACGG--AGAGGACGAGCAGCCAGGCGAAGAAGAGGAG 772
consensus_16672#2 CGATCCCGGGGGAGCAGGCGGAGACGG--AGAGGACGAGCAGCCAGGCGAAGAAGAGGAG 743
consensus_16672#5 -GATATCTGAGGACCATATGANGAACATCAGGGCACAAGCTTCTGTGTGTTTGCAACGNG 215
consensus_16672#0 GAGGATGTAGGTCGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCAGATC 819
consensus_16672#4 ------------------------------------------------------------
consensus_16672#3 GAGGATGTAGGTCGTCCACACACAAGGGTACATGAACCACTCCGTGTTCTTGTTCAGATC 480
consensus_16672#1 GAGGATGTAGGTGGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCACGTC 832
consensus_16672#2 GAGGATGTAGGTGGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCACGTC 803
consensus_16672#5 GGTCAAGNGANCTTTGTGCAAAC-ACGGTATCTAAAGTA----GTGAAANANCTAAACTT 270
consensus_16672#0 CGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCC 879
consensus_16672#4 ------------------------------------------------------------
consensus_16672#3 CGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCC 540
consensus_16672#1 CACCGGCGGCGCCGCCTCCACGT--AGTAGGGGTAGGACCCCGCCCTCCGCCCCATCTCC 890
consensus_16672#2 CACCGGCGGCGCCGCCTCCACGT--AGTAGGGGTAGGACCCCGCCCTCCGCCCCATCTCC 861
consensus_16672#5 TTTCACCACTGCAATCTGTAGTNTGTGCATAGGTGTAGGNN------------------- 311
consensus_16672#0 CCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCT 939
consensus_16672#4 ------------------------------------------------------------
consensus_16672#3 CCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCT 600
consensus_16672#1 TCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCG-TGCGGTGC 949
consensus_16672#2 TCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCG-TGCGGTGC 920
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 GAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAG 999
consensus_16672#4 ------------------------------------------------------------
consensus_16672#3 GAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAG 660
consensus_16672#1 GGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGTGATGATTTTCTAC 1009
consensus_16672#2 GGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGT------------- 967
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 AGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAG 1059
consensus_16672#4 ------------------------------------------------------------
consensus_16672#3 AGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAG 720
consensus_16672#1 TC---------------------------------------------------------- 1011
consensus_16672#2 ------------------------------------------------------------
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 AAGGCGAGGAGAAGGTTCAAAGATGGAGGCGAAAAGAAAAAACGCGAGGGGGAGAGGAGA 1119
consensus_16672#4 ------------------------------------------------------------
consensus_16672#3 AAGGCGAGGAGAAGGTTCAAAAATGGAGGCGAAAAG------------------------ 756
consensus_16672#1 ------------------------------------------------------------
consensus_16672#2 ------------------------------------------------------------
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 GGAGACCGACGGGCTGGCTGCCTGGCTGTGCGCCTGTGCGGCTGTGTGCCGCGACGCACA 1179
consensus_16672#4 ------------------------------------------------------------
consensus_16672#3 ------------------------------------------------------------
consensus_16672#1 ------------------------------------------------------------
consensus_16672#2 ------------------------------------------------------------
consensus_16672#5 ------------------------------------------------------------
consensus_16672#0 CCGCGCCACCAATGCCGTCACACCGCA 1206
consensus_16672#4 ---------------------------
consensus_16672#3 ---------------------------
consensus_16672#1 ---------------------------
consensus_16672#2 ---------------------------
consensus_16672#5 ---------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||