cluster # 3900

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Oryza sativa
cluster # 3900 cluster # 3900 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3900#0 length = 2845 sequences # 3
consensusID : consensus_3900#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2845
fasta sequence
                              [TCTCATGTCCACCGCCGCGGACTCCTCCTCCCTCTCCGGCGACTCCTCCCCGGCCTCCTCCGGCGACGCCGAATCCTCCTCCTCCCCGTCCTCCTCCGCCGCCGCCGCTGGGGGCTCCGACGACCCCGCCCCCGTCGACCAAGTCGTCGCCTCGGGCTCCGGTGCAGGCGGCGATGGCGACGCCGCCGCAGCCGTCCCAACCTCGCCGCGCATTGGCATGTACTTCGAGACGGAGGAGGACGCGTACGAGTTCTACAAGGCGTACGCCGCCAGGCTCGGCTTCGTCGTCCGCAAGTCCAACAAGTCCAAGAACTCGCGCCACACCGTCACCCGCCGCCTCTTCGTCTGCTCCAAGCAGGGATTCCGCCAAGAACCCAAGAAGCCGCCTCAGGACGAGGCCGCCGCGGCGTCGCCCCCGCCTCCGCGGTGCCCGGACTCGCGCACTGGGTGCCTGGCGTCGCTCACCATCAAGCTCCTCCCGTCGGCCAACGCGTTCCGAGTCACCGACTTTGCCACCGAGCACAACCACCCGCTCGCCTCCGCCGCGCCCGCCGTGTCGCTGGCATTGCTGCCGCCGAGCTCGTCCCACCACACCATCGCTGCCGTGGCGAGCCTGCCGGACCCGAGGGATGGGCCACGCACCGATATGCACTTTGAGACGGAGGACGACGCGTATGCTTTCTACAACCGGTACGCTGAGCATGTGGGCTTCAGTGTCCGCCGCTCGTACAAGAAGCGAAAGCGTGGGGTGATCGTGTCCCGGATCTTTG-TTTGTTCCCGCGAGGGAGTTAGTGACCGTGCCAAGCACGAGAGTATTGCCATTGTCAGCAACAATGCTAGCACAGGGCCATCAGGCACACCTAGACCAGGCCCTCCACCGACGCGGACAGGGTGCCAGGCAAGAATGGTAATCAAGATCACCCCATGCCGGACGTACCGGGTGGCAAAGTTTGTTCCGGAGCATAATCATCCACTTGCCAATCCAGATAGTGTGCACAAGCTGCGGTCGCACAAAATGAGGGCTCGAGCTCATGAGCTTGGGGCAGGGGAACTGCATCGCAGAAAGCATGGGAAAGGTGTGCAACTTGGGGATGCTGGAGCAGTGCTGGAATACTTGGAAGAGCTGCAGGTAGGGAACCCTTCAGTGTATTATGCGGTAGGAGTGGGGCCTGATGGAAAATCAGCTGCAAATTTCTTCTGGGCTGATGCAGAGTCAATGATCGACTATAGGAGCTTTGGTGATGTTGTTTGCTTTGATACAACATATGAGTTAAATGGGTATGGAAGGCCATTTGCATTGTTTGTTGGTGTGGACCACCACAAACAGATGCTTGTGTTTGGTGCTGCTCTGCTTTATGATGAGAGCATTGAATCATTGAAATGGGTATTCAAGGCGTTTGCTGATGCAATGTGTGGTAAGCAGCCAGACACTGTTTTGATTGATGAGCGTCCTGAGTGTGCTATGGCAGCAGCAGAGGTTTGGCCAAGAAGTAGCCATTGCACAAGTGTGTGGCATATCTACCATAACTCAAAGAGGCACTTGAAGCAGGTATTTGAAGGCTCAAAGAGTTTTGCCAATGCTTTAAGCCATTGTCTCTTTGAATGTGATGATGAGGTGGAATTCTTGTCAGCATGGGAAAAACTAATTGAGAAGCATGATGTAGGTGAGAATGAGTGGCTCAACAAACTTTTTCTGGAGAAAGAAAAATGGGCTTTGCCTTATTGGAGAGCCTTGTTTTCTGCTGATATCCTCACCACTCTTAGGAAGGATAATATGATTAATGATATTAAACGGGAGCTCAGTGAGCAAGAAGATATTCTGCAGTTCTTAAGGCGCTATGAGACCATGCTTGAGGCGCATCGGTCAAAGAAATTGCAGGCTGATGTTGATGGAAGCCAGGTGACATTGCCAATCCCATCCTTGCGAATGTTAAAGCAAGCTTCAAGTGCATACACGCCCGAAGCTTTCAAGATGTTCCAGGGTGAGTTTGAGGCTTACATGAATTGCATGTCCTTCCCATGTGGTGGACTTGGCACAATCTCGGAGTATAAAATAACACTTGATGAGAAGCCATCAGAGAGCATTGTGAAATTTGATGCACTAGATGGATCAGCTACGTGCAGCTGTAGGAAGTTTGAATCTGTTGGAATTCAGTGCTGTCATGTACTAAAGGTACTTGATCTCAAGAATATAAAGGAACTCCCAGAACAATACATTTTGAGGAGATGGAGAAAAGACGCTCGTTCTGTCAGAATAGGGGAAGAACCTTCTGGTGGATCTAGCAGTATGCGTTCAGCCTCAGAAGTCCGCTTCAGTACTATGTGCCGTTTTCTTAGCTTGATAGCTTCAAGGGCTGCCAGATCTGAGGAGGCAACGTCTTATATCGAAAGTCAATCAAGTGTTCTTCTGAAGCATCTAGATGATATTTTACAAACGGGTTATCCTGATATAGGAAATCATGTTGTTGCTTCAAGTAGTCAACCAATTTCTTTTGTGGGAAACCAACTTCCTGACCATACATCACAAGCAAGAGGAGTTCCACAGACCACAAATGGCCTGATGGGGGTTTGACAGAGCAATTGCAGTCCAGACCATACTGGCTACTATGGTCTGACATCATTGTTGGGGATTTCAACGGTTGATGAGTTTGTAAAATCCAGCAGACAATTGGGATTGACCAGTGGGTTCTTTGTAGTGTTAGTCAAATGCAGGAGTATGGCTAGGCTATGTACAGTATTTATCTGGTACCATGTTGATGCAAGCAAGTGTATTCTGTAGATCCTGTCTTTCTCAAATTATACTTTGGTAGCTGTTCTGCTAAATATAACCAATCCTGATGTCTCT]

[+] EMBL AK119387             [TCTCATGTCCACCGCCGCGGACTCCTCCTCCCTCTCCGGCGACTCCTCCCCGGCCTCCTCCGGCGACGCCGAATCCTCCTCCTCCCCGTCCTCCTCCGCCGCCGCCGCTGGGGGCTCCGACGACCCCGCCCCCGTCGACCAAGTCGTCGCCTCGGGCTCCGGTGCAGGCGGCGATGGCGACGCCGCCGCAGCCGTCCCAACCTCGCCGCGCATTGGCATGTACTTCGAGACGGAGGAGGACGCGTACGAGTTCTACAAGGCGTACGCCGCCAGGCTCGGCTTCGTCGTCCGCAAGTCCAACAAGTCCAAGAACTCGCGCCACACCGTCACCCGCCGCCTCTTCGTCTGCTCCAAGCAGGGATTCCGCCAAGAACCCAAGAAGCCGCCTCAGGACGAGGCCGCCGCGGCGTCGCCCCCGCCTCCGCGGTGCCCGGACTCGCGCACTGGGTGCCTGGCGTCGCTCACCATCAAGCTCCTCCCGTCGGCCAACGCGTTCCGAGTCACCGACTTTGCCACCGAGCACAACCACCCGCTCGCCTCCGCCGCGCCCGCCGTGTCGCTGGCATTGCTGCCGCCGAGCTCGTCCCACCACACCATCGCTGCCGTGGCGAGCCTGCCGGACCCGAGGGATGGGCCACGCACCGATATGCACTTTGAGACGGAGGACGACGCGTATGCTTTCTACAACCGGTACGCTGAGCATGTGGGCTTCAGTGTCCGCCGCTCGTACAAGAAGCGAAAGCGTGGGGTGATCGTGTCCCGGATCTTTG TTTGTTCCCGCGAGGGAGTTAGTGACCGTGCCAAGCACGAGAGTATTGCCATTGTCAGCAACAATGCTAGCACAGGGCCATCAGGCACACCTAGACCAGGCCCTCCACCGACGCGGACAGGGTGCCAGGCAAGAATGGTAATCAAGATCACCCCATGCCGGACGTACCGGGTGGCAAAGTTTGTTCCGGAGCATAATCATCCACTTGCCAATCCAGATAGTGTGCACAAGCTGCGGTCGCACAAAATGAGGGCTCGAGCTCATGAGCTTGGGGCAGGGGAACTGCATCGCAGAAAGCATGGGAAAGGTGTGCAACTTGGGGATGCTGGAGCAGTGCTGGAATACTTGGAAGAGCTGCAGGTAGGGAACCCTTCAGTGTATTATGCGGTAGGAGTGGGGCCTGATGGAAAATCAGCTGCAAATTTCTTCTGGGCTGATGCAGAGTCAATGATCGACTATAGGAGCTTTGGTGATGTTGTTTGCTTTGATACAACATATGAGTTAAATGGGTATGGAAGGCCATTTGCATTGTTTGTTGGTGTGGACCACCACAAACAGATGCTTGTGTTTGGTGCTGCTCTGCTTTATGATGAGAGCATTGAATCATTGAAATGGGTATTCAAGGCGTTTGCTGATGCAATGTGTGGTAAGCAGCCAGACACTGTTTTGATTGATGAGCGTCCTGAGTGTGCTATGGCAGCAGCAGAGGTTTGGCCAAGAAGTAGCCATTGCACAAGTGTGTGGCATATCTACCATAACTCAAAGAGGCACTTGAAGCAGGTATTTGAAGGCTCAAAGAGTTTTGCCAATGCTTTAAGCCATTGTCTCTTTGAATGTGATGATGAGGTGGAATTCTTGTCAGCATGGGAAAAACTAATTGAGAAGCATGATGTAGGTGAGAATGAGTGGCTCAACAAACTTTTTCTGGAGAAAGAAAAATGGGCTTTGCCTTATTGGAGAGCCTTGTTTTCTGCTGATATCCTCACCACTCTTAGGAAGGATAATATGATTAATGATATTAAACGGGAGCTCAGTGAGCAAGAAGATATTCTGCAGTTCTTAAGGCGCTATGAGACCATGCTTGAGGCGCATCGGTCAAAGAAATTGCAGGCTGATGTTGATGGAAGCCAGGTGACATTGCCAATCCCATCCTTGCGAATGTTAAAGCAAGCTTCAAGTGCATACACGCCCGAAGCTTTCAAGATGTTCCAGGGTGAGTTTGAGGCTTACATGAATTGCATGTCCTTCCCATGTGGTGGACTTGGCACAATCTCGGAGTATAAAATAACACTTGATGAGAAGCCATCAGAGAGCATTGTGAAATTTGATGCACTAGATGGATCAGCTACGTGCAGCTGTAGGAAGTTTGAATCTGTTGGAATTCAGTGCTGTCATGTACTAAAGGTACTTGATCTCAAGAATATAAAGGAACTCCCAGAACAATACATTTTGAGGAGATGGAGAAAAGACGCTCGTTCTGTCAGAATAGGGGAAGAACCTTCTGGTGGATCTAGCAGTATGCGTTCAGCCTCAGAAGTCCGCTTCAGTACTATGTGCCGTTTTCTTAGCTTGATAGCTTCAAGGGCTGCCAGATCTGAGGAGGCAACGTCTTATATCGAAAGTCAATCAAGTGTTCTTCTGAAGCATCTAGATGATATTTTACAAACGGGTTATCCTGATATAGGAAATCATGTTGTTGCTTCAAGTAGTCAACCAATTTCTTTTGTGGGAAACCAACTTCCTGACCATACATCACAAGCAAGAGGAGTTCCACAGACCACAAATGGCCTGATGGGGGTTTGACAGAGCAATTGCAGTCCAGACCATACTGGCTACTATGGTCTGACATCATTGTTGGGGATTTCAACGGTTGATGAGTTTGTAAAATCCAGCAGACAATTGGGATTGACCAGTGGGTTCTTTGTAGTGTTAGTCAAATGCAGGAGTATGGCTAGGCTATGTACAGTATTTATCTGGTACCATGTTGATGCAAGCAAGTGTATTCTGTAGATCCTGTCTTTCTCAAATTATACTTTGGTAGCTGTTCTGCTAAATATAACCAATCCTGATGTCTCT]
[+] EMBL CB634256             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TACAAGAAGCGAAAGCGTGGGGTGATCGTGTCCCGGATCTTTGAGAGGTTCCCGCGAGGGAGTTAGTGACCGTGCCAAGCACGAGAGTATTGCCATTGTCAGCAACAATGCTAGCACAGGGCCATCAGGCACACCTAGACCAGGCCCTCCACCGACGCGGACAGGGTGCCAGGCAAGAATGGTAATCAAGATCACCCCATGCCGGACGTACCGGGTGGCAAAGTTTGTTCCGGAGCATAATCATCCACTTGCCAATCCAGATAGTGTGCACAAGCTGCGGTCGCACAAAATGAGGGCTCGAGCTCATGAGCTTGGGGCAGGGGAACTGCATCGCAGAAAGCATGGGAAAGGTGTGCAACTTGGGGATGCTGGAGCAGTGCTGGAATACTTGGAAGAGCTGCAGGTAGGGAACCCTTCAGTGTATTATGCGGTTGGAGTGGGGCCTGATGGAAAATCAGCTGCAAATTTCTTCTGGGCTGATGCAAAGTCAATGATCGACTATAGGAGCTTTGGTGATGTTGTTTGCTTTGATACAACATATGAGTTAAATGGGTATGGAAGGCCATTTGCATTGTTTGTTGGTGTGGACAACCACAAACAGATGCTTGTGTTTGGTGCTGCTCTGCTTTATGATGAGAGCATTGAATCATTGAAATGGGTATTCAAGGCGTTTGCTGATGCAATGTGTGGTAAGCAGCCAGACACTGTTTTGATTGATGAGCGTCCTGAGTGTGCTATGGCAGCAGCAGAGGTTTGGCCAAGAAGTAGCCATTGCACAAGTGTGTGGCATATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB634257             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAAATTTGATGCACTAGATGGATCAGCTACGTGCAGCTGTAGGAAGTTTGAATCTGTTGGAATTCAGTGCTGTCATGTACTAAAGGTACTTGATCTCAAGAATATAAAGGAACTCCCAGAACAATACATTTTGAGGAGATGGAGAAAAGACGCTCGTTCTGTCAGAATAGGGGAAGAACCTTCTGGTGGATCTAGCAGTATGCGTTCAGCCTCAGAAGTCCGCTTCAGTACTATGTGCCGTTTTCTTAGCTTGATAGCTTCAAGGGCTGCCAGATCTGAGGAGGCAACGTCTTATATCGAAAGTCAATCAAGTGTTCTTCTGAAGCATCTAGATGATATTTTACAAACAGGTTATCCTGATATAGGAAATCATGTTGTTGCTTCAAGTAGTCAACCAATTTCTTTTGTGGGAAACCAACTTCCTGACCATACATCACAAGCAAGAGGAGTTCCACAGACCACAAATGGCCTGATGGGGGTTTGACGCAGCAATTGCAGTCCAGACCATACTGGCTACTATGGTCTGACATCATTGTTGGGGATTTCAACGGTTGATGAGTTTGTAAAATCCAGCAGACAATTGGGATTGACCAGTGGGTTCTTTGTAGCGTTAGTCAAATGCAGGAGTATGGTTAGGCTATGTACAGTATTTATCTGGTACCATGTTGATGCAAGCAAGTGTATTCTGTAGATCCTGTCTTTCTCAAATGGTACTTTGGTAGCTGTTCTGCTAAATATAACCAAaatataga     ]




>consensus_3900#0
TCTCATGTCCACCGCCGCGGACTCCTCCTCCCTCTCCGGCGACTCCTCCCCGGCCTCCTC
CGGCGACGCCGAATCCTCCTCCTCCCCGTCCTCCTCCGCCGCCGCCGCTGGGGGCTCCGA
CGACCCCGCCCCCGTCGACCAAGTCGTCGCCTCGGGCTCCGGTGCAGGCGGCGATGGCGA
CGCCGCCGCAGCCGTCCCAACCTCGCCGCGCATTGGCATGTACTTCGAGACGGAGGAGGA
CGCGTACGAGTTCTACAAGGCGTACGCCGCCAGGCTCGGCTTCGTCGTCCGCAAGTCCAA
CAAGTCCAAGAACTCGCGCCACACCGTCACCCGCCGCCTCTTCGTCTGCTCCAAGCAGGG
ATTCCGCCAAGAACCCAAGAAGCCGCCTCAGGACGAGGCCGCCGCGGCGTCGCCCCCGCC
TCCGCGGTGCCCGGACTCGCGCACTGGGTGCCTGGCGTCGCTCACCATCAAGCTCCTCCC
GTCGGCCAACGCGTTCCGAGTCACCGACTTTGCCACCGAGCACAACCACCCGCTCGCCTC
CGCCGCGCCCGCCGTGTCGCTGGCATTGCTGCCGCCGAGCTCGTCCCACCACACCATCGC
TGCCGTGGCGAGCCTGCCGGACCCGAGGGATGGGCCACGCACCGATATGCACTTTGAGAC
GGAGGACGACGCGTATGCTTTCTACAACCGGTACGCTGAGCATGTGGGCTTCAGTGTCCG
CCGCTCGTACAAGAAGCGAAAGCGTGGGGTGATCGTGTCCCGGATCTTTGTTTGTTCCCG
CGAGGGAGTTAGTGACCGTGCCAAGCACGAGAGTATTGCCATTGTCAGCAACAATGCTAG
CACAGGGCCATCAGGCACACCTAGACCAGGCCCTCCACCGACGCGGACAGGGTGCCAGGC
AAGAATGGTAATCAAGATCACCCCATGCCGGACGTACCGGGTGGCAAAGTTTGTTCCGGA
GCATAATCATCCACTTGCCAATCCAGATAGTGTGCACAAGCTGCGGTCGCACAAAATGAG
GGCTCGAGCTCATGAGCTTGGGGCAGGGGAACTGCATCGCAGAAAGCATGGGAAAGGTGT
GCAACTTGGGGATGCTGGAGCAGTGCTGGAATACTTGGAAGAGCTGCAGGTAGGGAACCC
TTCAGTGTATTATGCGGTAGGAGTGGGGCCTGATGGAAAATCAGCTGCAAATTTCTTCTG
GGCTGATGCAGAGTCAATGATCGACTATAGGAGCTTTGGTGATGTTGTTTGCTTTGATAC
AACATATGAGTTAAATGGGTATGGAAGGCCATTTGCATTGTTTGTTGGTGTGGACCACCA
CAAACAGATGCTTGTGTTTGGTGCTGCTCTGCTTTATGATGAGAGCATTGAATCATTGAA
ATGGGTATTCAAGGCGTTTGCTGATGCAATGTGTGGTAAGCAGCCAGACACTGTTTTGAT
TGATGAGCGTCCTGAGTGTGCTATGGCAGCAGCAGAGGTTTGGCCAAGAAGTAGCCATTG
CACAAGTGTGTGGCATATCTACCATAACTCAAAGAGGCACTTGAAGCAGGTATTTGAAGG
CTCAAAGAGTTTTGCCAATGCTTTAAGCCATTGTCTCTTTGAATGTGATGATGAGGTGGA
ATTCTTGTCAGCATGGGAAAAACTAATTGAGAAGCATGATGTAGGTGAGAATGAGTGGCT
CAACAAACTTTTTCTGGAGAAAGAAAAATGGGCTTTGCCTTATTGGAGAGCCTTGTTTTC
TGCTGATATCCTCACCACTCTTAGGAAGGATAATATGATTAATGATATTAAACGGGAGCT
CAGTGAGCAAGAAGATATTCTGCAGTTCTTAAGGCGCTATGAGACCATGCTTGAGGCGCA
TCGGTCAAAGAAATTGCAGGCTGATGTTGATGGAAGCCAGGTGACATTGCCAATCCCATC
CTTGCGAATGTTAAAGCAAGCTTCAAGTGCATACACGCCCGAAGCTTTCAAGATGTTCCA
GGGTGAGTTTGAGGCTTACATGAATTGCATGTCCTTCCCATGTGGTGGACTTGGCACAAT
CTCGGAGTATAAAATAACACTTGATGAGAAGCCATCAGAGAGCATTGTGAAATTTGATGC
ACTAGATGGATCAGCTACGTGCAGCTGTAGGAAGTTTGAATCTGTTGGAATTCAGTGCTG
TCATGTACTAAAGGTACTTGATCTCAAGAATATAAAGGAACTCCCAGAACAATACATTTT
GAGGAGATGGAGAAAAGACGCTCGTTCTGTCAGAATAGGGGAAGAACCTTCTGGTGGATC
TAGCAGTATGCGTTCAGCCTCAGAAGTCCGCTTCAGTACTATGTGCCGTTTTCTTAGCTT
GATAGCTTCAAGGGCTGCCAGATCTGAGGAGGCAACGTCTTATATCGAAAGTCAATCAAG
TGTTCTTCTGAAGCATCTAGATGATATTTTACAAACGGGTTATCCTGATATAGGAAATCA
TGTTGTTGCTTCAAGTAGTCAACCAATTTCTTTTGTGGGAAACCAACTTCCTGACCATAC
ATCACAAGCAAGAGGAGTTCCACAGACCACAAATGGCCTGATGGGGGTTTGACAGAGCAA
TTGCAGTCCAGACCATACTGGCTACTATGGTCTGACATCATTGTTGGGGATTTCAACGGT
TGATGAGTTTGTAAAATCCAGCAGACAATTGGGATTGACCAGTGGGTTCTTTGTAGTGTT
AGTCAAATGCAGGAGTATGGCTAGGCTATGTACAGTATTTATCTGGTACCATGTTGATGC
AAGCAAGTGTATTCTGTAGATCCTGTCTTTCTCAAATTATACTTTGGTAGCTGTTCTGCT
AAATATAACCAATCCTGATGTCTCT
clustalw multiple alignements is not computed in this case