cluster # 3990

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Oryza sativa
cluster # 3990 cluster # 3990 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3990#0 length = 1314 sequences # 3
consensusID : consensus_3990#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1314
fasta sequence
                              [GTGCCGCAGTAGCATCCACCGGCCTCCAGGTTGAACCAGTGAGCTTTTCTGCCCAGGCATCATCAATCTCCTCCGGCACCACATCATTCAACCGGGGAGGTAGTACACCCACATGTTCCTCCATTGCATGATGTACATGTGATTCAGCATCAGCAAAATGCTCCTCACACCGGCCACATACCAAAAACTCCCATTTTCCACTCCTAGTGGCAAACCTTATCGCCTCGTTAAGCACATCAGATACCAAACTGGCAGCATCTTTCTCCTTATGCATCGCAGTAGCGTAGTGTGACTTGAGCTCAGAAATACTGGTGCTTAAGAATGCAAGCCTCCGATCCATGGGCACTGTGGCCCAGAACTCACGCACCTGATTCATGCGACCGGACACTGGCGAAGCTGCTGCCTTCCTGGACCCACCCTTCCTCCGGTCAGCGCGATGCCCAGACACTGATGACTGACACGACGAGGAGGGGGCCTCATCCCCCGGTGACTGTGATTGGGAGGTGGATGATGAGGCCGATGTGGCATTGTGCTTCTGCTGCTCCATCAGCCTCATCGCAGCAAGCCGCACCTCAATCTCCTTGCGCCGCTCTTCAGGGGTCTTATTAGCCTTCTTGATCTCATTCGGGCGGCGCGGCGCAGGCGCAGCAGGCAGGAGCCGGACCTCGGAAGAATCGTCGGCGCCGCCGCGGCGAATGGGGAAAACCCGAACCTTATCCTCAGGTGTGTAGCCCATGTTCATGTTCTTAACCCACAGCGAGATGGACGTCATGTTGGACCTCTGCAACAGGTTGCTGAGCTCGGCCTTGACCTGCTCGACGTCCGGGGCCGGTAGCCTGAGGGAGTGGGGCGCCGGGTCGGTGGGGCTCTGGATGGCCATCCCGCGGTTGCACTCGCTGCTGGCGGCCTCGTACCCGGTGGTGTCGGAGGCGATCTCGTAGAGGAGCATGGCGTGGAAGTGGGCGAGCTCGATGGAGTCCGGGGCCAGCTCGACCGCCTTGCGGGCCGCCTCGAGCGCGAGCCGCTGGTGCCGCGCGCGGGAGACGGGCTCGTCGAGGACCGCGGCGTAGCGCGCCAGCACCGTCCCCTGCGCGCAGAGCAGCAGCGGCGATCCCTCCCCGTGCTTCCCGACCGCGTCCTTCACCACCCGGAGCGCCTTCGCGTGGTTCCCCCGCTGCAGCGCTGCCAGGGCCTTCTCGCAGACGGCCCGGACCGCGGCGCCGCCATCCGCCGCCGCCGCATCGGGGTGGCCGGCCGCCGGAGGGGAGGGAGGAGTAGGGTTTGCGGCGGCGGCGGCGGTGTTGAGGGTTCGCT]

[+] EMBL CB662292             [GTGCCGCAGTAGCATCCACCGGCCTCCAGGTTGAACCAGTGAGCTTTTCTGCCCAGGCATCATCAATCTCCTCCGGCACCACATCATTCAACCGGGGAGGTAGTACACCCACATGTTCCTCCATTGCATGATGTACATGTGATTCAGCATCAGCAAAATGCTCCTCACACCGGCCACATACCAAAAACTCCCATTTTCCACTCCTAGTGGCAAACCTTATCGCCTCGTTAAGCACATCAGATACCAAACTGGCAGCATCTTTCTCCTTATGCATCGCAGTAGCGTAGTGTGACTTGAGCTCAGAAATACTGGTGCTTAAGAATGCAAGCCTCCGATCCATGGGCACTGTGGCCCAGAACTCACGCACCTGATTCATGCGACCGGACACTGGCGAAGCTGCTGCCTTCCTGGACCCACCCTTCCTCCGGTCAGCGCGATGCCCAGACACTGATGACTGACACGACGAGGAGGGGGCCTCATCCCCCGGTGACTGTGATTGGGAGGTGGATGATGAGGCCGATGTGGCATTGTGCTTCTGCTGCTCCATCAGCCTCATCGCAGCAAGCCGCACCTCAATCTCCTTGCGCCGCTCTTCAGGGGTCTTATTAGCCTTCTTGATCTCATTCGGGCGGCGCGGCGCAGGCGCAGCAGGCAGGAGCCGGACCTCGGAAGAATCGTCGGCGCCGCCGCGGCGAATGGGGAAAACCCGAACCTTATCCTCAGGTGTGTAGCCCATGTTCATGTTCTTAACCCACAGCGAGATGGACGTCATGTTGGACCTCTGCAACAGGTTGCTGAGCTCGGCCTTGACCTGCTCGACGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB642102             [  GCCGCAGTAGCATCCACCGGCCTCCAGGTTGAACCAGTGAGCTTTTCTGCNCAGGCATCATCAATCTCCTCCGGCACCACATCATTCAACCGGGGAGGTAGTACACCCACATGTTCCTCCATTGCATGATGTACATGTGATTCAGCATCAGCAAAATGCTCCTCACACCGGCCACATACCAAAAACTCCCATTTTCCACTCCTAGTGGCAAACCTTATCGCCTCGTTAAGCACATCAGATACCAAACTGGCAGCATCTTTCTCCTTATGCATCGCAGTAGCGTAGTGTGACTTGAGCTCAGAAATACTGGTGCTTAAGAATGCAAGCCTCCGATCCATGGGCACTGTGGCCCAGAACTCACGCACCTGATTCATGCGACCGGACACTGGCGAAGCTGCTGCCTTCCTGGACCCACCCTTCCTCCGGTCAGCGCGATGCCCAGACACTGATGACTGACACGACGAGGAGGGGGCCTCATCCCCCGGTGACTGTGATTGGGAGGTGGATGATGAGGCCGATGTGGCATTGTGCTTCTGCTGCTCCATCAGCCTCATCGCAGCAAGCCGCACCTCAATCTCCTTGCGCCGCTCTTCAGGGGTCTTATTAGCCTTCTTGATCTCATTCGGGCGGCGCGGCGCAGGCGCAGCAGGCAGGAGCCGGACCTCGGAAGAATCGTCGGCGCCGCCGCGGCGAATGGGGAAAACCCGAACGTTATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB662291             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGCGGCGCGGCGCAGGCGCAGCAGGCAGGAGCCGGACCTCGGAAGAATTGTCGGCGCCGCCGCGGCGAATGGGGAAAACCCGAACCTTATCCTCAGGTGTGTAGCCCATGTTCATGTTCTTAACCCACAGCGAGATGGACGTCATGTTGGACCTCTGCAACAGGTTGCTGAGCTCGGCCTTGACCTGCTCGACGTCCGGGGCCGGTAGCCTGAGGGAGTGGGGCGCCGGGTCGGTGGGGCTCTGGATGGCCATCCCGCGGTTGCACTCGCTGCTGGCGGCCTCGTACCCGGTGGTGTCGGAGGCGATCTCGTAGAGGAGCATGGCGTGGAAGTGGGCGAGCTCGATGGAGTCCGGGGCCAGCTCGACCGCCTTGCGGGCCGCCTCGAGCGCGAGCCGCTGGTGCCGCGCGCGGGAGACGGGCTCGTCGAGGACCGCGGCGTAGCGCGCCAGCACCGTCCCCTGCGCGCAGAGCAGCAGCGGCGATCCCTCCCCGTGCTTCCCGACCGCGTCCTTCACCACCCGGAGCGCCTTCGCGTGGTTCCCCCGCTGCAGCGCTGCCAGGGCCTTCTCGCAGACGGCCCGGACCGCGGCGCCGCCATCCGCCGCCGCCGCATCGGGGTGGCCGGCCGCCGGAGGGGAGGGAGGAGTAGGGTTTGCGGCGGCGGCGGCGGTGTTGAGGGTTCGCT]




>consensus_3990#0
GTGCCGCAGTAGCATCCACCGGCCTCCAGGTTGAACCAGTGAGCTTTTCTGCCCAGGCAT
CATCAATCTCCTCCGGCACCACATCATTCAACCGGGGAGGTAGTACACCCACATGTTCCT
CCATTGCATGATGTACATGTGATTCAGCATCAGCAAAATGCTCCTCACACCGGCCACATA
CCAAAAACTCCCATTTTCCACTCCTAGTGGCAAACCTTATCGCCTCGTTAAGCACATCAG
ATACCAAACTGGCAGCATCTTTCTCCTTATGCATCGCAGTAGCGTAGTGTGACTTGAGCT
CAGAAATACTGGTGCTTAAGAATGCAAGCCTCCGATCCATGGGCACTGTGGCCCAGAACT
CACGCACCTGATTCATGCGACCGGACACTGGCGAAGCTGCTGCCTTCCTGGACCCACCCT
TCCTCCGGTCAGCGCGATGCCCAGACACTGATGACTGACACGACGAGGAGGGGGCCTCAT
CCCCCGGTGACTGTGATTGGGAGGTGGATGATGAGGCCGATGTGGCATTGTGCTTCTGCT
GCTCCATCAGCCTCATCGCAGCAAGCCGCACCTCAATCTCCTTGCGCCGCTCTTCAGGGG
TCTTATTAGCCTTCTTGATCTCATTCGGGCGGCGCGGCGCAGGCGCAGCAGGCAGGAGCC
GGACCTCGGAAGAATCGTCGGCGCCGCCGCGGCGAATGGGGAAAACCCGAACCTTATCCT
CAGGTGTGTAGCCCATGTTCATGTTCTTAACCCACAGCGAGATGGACGTCATGTTGGACC
TCTGCAACAGGTTGCTGAGCTCGGCCTTGACCTGCTCGACGTCCGGGGCCGGTAGCCTGA
GGGAGTGGGGCGCCGGGTCGGTGGGGCTCTGGATGGCCATCCCGCGGTTGCACTCGCTGC
TGGCGGCCTCGTACCCGGTGGTGTCGGAGGCGATCTCGTAGAGGAGCATGGCGTGGAAGT
GGGCGAGCTCGATGGAGTCCGGGGCCAGCTCGACCGCCTTGCGGGCCGCCTCGAGCGCGA
GCCGCTGGTGCCGCGCGCGGGAGACGGGCTCGTCGAGGACCGCGGCGTAGCGCGCCAGCA
CCGTCCCCTGCGCGCAGAGCAGCAGCGGCGATCCCTCCCCGTGCTTCCCGACCGCGTCCT
TCACCACCCGGAGCGCCTTCGCGTGGTTCCCCCGCTGCAGCGCTGCCAGGGCCTTCTCGC
AGACGGCCCGGACCGCGGCGCCGCCATCCGCCGCCGCCGCATCGGGGTGGCCGGCCGCCG
GAGGGGAGGGAGGAGTAGGGTTTGCGGCGGCGGCGGCGGTGTTGAGGGTTCGCT
clustalw multiple alignements is not computed in this case