cluster # 4160

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4160 cluster # 4160 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4160#0 length = 880 sequences # 3

consensusID : consensus_4160#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 880
fasta sequence

                              [AATCGAACAAACTCAAATTCAATTCCATCTCTCTCCTGTTCAATTCTGTTCTGTTCTTCTCCTTCTTCTTCTTCCTCAAGCCATCTCTCTCAATCTCTTTCCTTCTCTACTCGACCGAATCTCTCCTATGAATTCGAGACCGTGACAATTTGGTATCCAGAGCAATTTCGATCCTGGAGAAGCCACGATATACTTCCCGTTTGCAACTTCAAGTCGAAGCGATGGAGGAGCAGAACATTGATTTCGGCAAGGTGTTGATGGAGATCCAGGAGTCCTTGGTGACGCTGAATCGTGCTCAAGGCGAAACTCAAGCAGCGCTCGTCAAGCTAGATCACGGAGTAAGCAGTTGGAGACCTCAAGTAGAAGCAGCAGTTCAGGAGCTACATGAGGAAGTCGGCGATCTTCGTCAGCAACTGGATCTCGTCGGCAAAATGAAGCAGGCTTCTCC-GGTGATGTCTTCCCCTCGAGTTCCGTTGATGGACGAGGAAAGGAAGGCGCCGCCGCTGCCTACGCCGCCAACTTCATCTCAAGCTGCCACGGC-GGAAGGTGGAAGCAAAGTGGGCCGGTGGCTGACTGCATGCTCATGAACA-CGGGGGAGGGTACTGGGGGATGAACACAACCCTAGGCCCGACTGCGGTCAAGGGGTGCGTATGAATCTCCTTCCACATCTCTGAAAAATTTTGATCAATTTGAGTTTGGGGGTGGGGAATATGATGGGGATCAGTTTGTGCGTCAGTATAATCACAGGGTTCCTAAGTTAGATTTCCCTAAGTTTGATGGAACAGACCCAGAGGATTGGAAAATGAGATGTGAACATCATTTTGATGTGAATAATACTTTTCCAGGGTTGTGGATTAGAATAGCCACAATTTAAAAAAAA]

[+] EMBL CF313233             [AATCGAACAAACTCAAATTCAATTCCATCTCTCTCCTGTTCAATTCTGTTCTGTTCTTCTCCTTCTTCTTCTTCCTCAAGCCATCTCTCTCAATCTCTTTCCTTCTCTACTCGACCGAATCTCTCCTATGAATTCGAGACCGTGACAATTTGGTATCCAGAGCAATTTCGATCCTGGAGAAGCCACGATATACTTCCCGTTTGCAACTTCAAGTCGAAGCGATGGAGGAGCAGAACATTGATTTCGGCAAGGTGTTGATGGAGATCCAGGAGTCCTTGGTGACGCTGAATCGTGCTCAAGGCGAAACTCAAGCAGCGCTCGTCAAGCTAGATCACGGAGTAAGCAGTTGGAGACCTCAAGTAGAAGCAGCAGTTCAGGAGCTACATGAGGAAGTCGGCGATCTTCGTCAGCAACTGGATCTCGTCGGCAAAATGAAGCAGGCTTCTCC GGTGATGTCTTCCCCTCGAGTTCCGTTGATGGACGAGGAAAGGAAGGCGCCGCCGCTGCCTACGCCGCCAACTTCATCTCAAGCTGCCACGGC GGAAGGTG                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF314679             [                                                                                     TCTCTCAATCTCTTTCCTTCTCTACTCGACCGAATCTCTCCTATGAATTCGAGACCGTGACAATTTGGTATCCAGAGCAATTTCGATCCTGGAGAAGCCACGATATACTTCCCGTTTGCAACTTCAAGTCGAAGCGATGGAGGAGCAGAACATTGATTTCGGCAAGGTGTTGATGGAGATCCAGGAGTCCTTGGTGACGCTGAATCGTGCTCAAGGCGAAACTCAAGCAGCGCTCGTCAAGCTAGATCACGGAGTAAGCAGTTGGAGACCTCAAGTAGAAGCAGCAGTTCAGGAGCTACATGAGGAAGTCGGCGATCTTCGTCAGCAACTGGATCTCGTCGGCAAAATGAAGCAGGCTTCTCCGGGTGATGTCTTCCCCTCGAGTTCCGTTGATGGACGAGGAAAGGAAGGCGCCGCCGCTGCCTACGCCGCCAACTTCATCTCAAGCTGCCACGGCGGGAAGGTGGAAGCAAAGTGGGCCGGTGGCTGACTGCATGCTCATGAACA CGGGGGAGGGTACTGGGGGATGAACACAACCCTAGGCCCGACTGCGGTCAAGGGGTGCGTATGAATCTCCTTCCAC                                                                                                                                                                                                                      ]
[-] EMBL CF313234             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCCGTTGATGGACGAGGAAAGGAAGGCGCCGCCGCTGCCTACGCCGCCAACTTCATCTCAAGCTGCCACGGC GGAAGGTGGAAGCAAAGT GGCCGGTGGCTGACTGCATGCTCATGAACACCGGGGAAGGGTACT GGGGATGAACACAACCCTAGGCCCGACTGCGGTCAA GGGTGCGTATGAATCTCCTTCCACATCTCTGAAAAATTTTGATCAATTTGAGTTTGGGGGTGGGGAATATGATGGGGATCAGTTTGTGCGTCAGTATAATCACAGGGTTCCTAAGTTAGATTTCCCTAAGTTTGATGGAACAGACCCAGAGGATTGGAAAATGAGATGTGAACATCATTTTGATGTGAATAATACTTTTCCAGGGTTGTGGATTAGAATAGCCACAATTTAAAAAAAA]




>consensus_4160#0
AATCGAACAAACTCAAATTCAATTCCATCTCTCTCCTGTTCAATTCTGTTCTGTTCTTCT
CCTTCTTCTTCTTCCTCAAGCCATCTCTCTCAATCTCTTTCCTTCTCTACTCGACCGAAT
CTCTCCTATGAATTCGAGACCGTGACAATTTGGTATCCAGAGCAATTTCGATCCTGGAGA
AGCCACGATATACTTCCCGTTTGCAACTTCAAGTCGAAGCGATGGAGGAGCAGAACATTG
ATTTCGGCAAGGTGTTGATGGAGATCCAGGAGTCCTTGGTGACGCTGAATCGTGCTCAAG
GCGAAACTCAAGCAGCGCTCGTCAAGCTAGATCACGGAGTAAGCAGTTGGAGACCTCAAG
TAGAAGCAGCAGTTCAGGAGCTACATGAGGAAGTCGGCGATCTTCGTCAGCAACTGGATC
TCGTCGGCAAAATGAAGCAGGCTTCTCCGGTGATGTCTTCCCCTCGAGTTCCGTTGATGG
ACGAGGAAAGGAAGGCGCCGCCGCTGCCTACGCCGCCAACTTCATCTCAAGCTGCCACGG
CGGAAGGTGGAAGCAAAGTGGGCCGGTGGCTGACTGCATGCTCATGAACACGGGGGAGGG
TACTGGGGGATGAACACAACCCTAGGCCCGACTGCGGTCAAGGGGTGCGTATGAATCTCC
TTCCACATCTCTGAAAAATTTTGATCAATTTGAGTTTGGGGGTGGGGAATATGATGGGGA
TCAGTTTGTGCGTCAGTATAATCACAGGGTTCCTAAGTTAGATTTCCCTAAGTTTGATGG
AACAGACCCAGAGGATTGGAAAATGAGATGTGAACATCATTTTGATGTGAATAATACTTT
TCCAGGGTTGTGGATTAGAATAGCCACAATTTAAAAAAAA

clustalw multiple alignements is not computed in this case