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Oryza sativa
cluster # 4171 cluster # 4171       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4171#0 length = 1352 sequences # 3  
consensusID : consensus_4171#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1352
fasta sequence 
                              [GCTCGGTGTACCCGGCGCCCGTGGTGTACCCGCACCACTCCCGCCAGATCTCCTGGAAGCCCAGGGTGTTCCTCTACCAGCATTTCCTCAGCGACGACGAGGCCAACCACCTCGTCTCCCTCGCGAGAACGGAGCTCAAGAGGTCAGCGGTGGCTGATAACCTGTCCGGCAAGAGCGAGCTCAGCGACGCCCGCACCAGCTCCGGCACCTTCATCCGCAAGAGCCAGGATCCAATTGTTGCTGGTATAGAGGAAAAAATTGCTGCGTGGACATTTCTTCCTAAAGAGAATGGTGAGGATATCCAAGTGTTAAGGTATAAGCACGGCGAGAAGTATGAACGGCACTATGATTACTTCAGCGACAATGTTAACACTCTCCGTGGTGGTCATCGCATAGCTACTGTTCTTATGTACTTAACAGATGTTGCAGAAGGTGGAGAAACAGTTTTCCCTCTAGCTGAGGAGTTTACAGAAAGTGGCACAAACAATGAAGATTCAACCTTGTCAGAATGTGCTAAAAAAGGTGTTGCAGTGAAACCACGAAAAGGGGATGCACTTCTGTTCTTCAACCTTAGCCCAGATGCTTCAAAAGATTCATTGAGCCTCCACGCTGGATGCCCAGTCATAAAGGGTGAGAAATGGTCTGCTACAAAGTGGATTCGTGTAGCCTCATTCGACAAGGTTTATCACACACAAGGCAATTGCACTGACGACAATGAGAGTTGTGAAAAATGGGCTGCCTTGGGAGAGTGCATAAAGAACCCAGAATACATGATTGGAACAGCAGCATTACCAGGTTACTGCAGGAAGAGTTGCAACATATGTTAGCGATCCAATTGTAAATAATCAACGGTAACTGCTTTGTCGGCAGTCTGATTTATACAGGAATGGGTTAAAATAAGTAGGTTCATGAGGTTTTTGGCACAAATTCTACCAGTTTTGGTTACTTCCTGATGACAACTTGGTTTTTGTTACCATTCTTCAATGGTAACTGGCAGGAATTAGAAAGCAACTCATTGTTAGTATCCATAATTTATGCTAGATGGAGATGCACTTTATCAGTGCAATTTCTTTGGAGAGCAGGTTTTTGTTTTTATTTCATAGAGTTGTCGACTTGAGCCTACTAGGTTATGGTTGGATTCTGCCAGAATTTACAAACATCTGGTCTGGTTTTCATCTGTAATCCTTGAGTTGTCGACTTGAACCTACTAGGTCATGGTTAGATCCTGCCAGAATTTACAAACATCTGGCCTGGTTTTCATACCTGTAATCCTTCTCATTTGTGGTATATAGCTTCAGTGATTTTTGAATTCATTAATCAAATCTCTTTATCCCTCTAAAAAAAAAAAAAAA]

[+] EMBL AK103739             [GCTCGGTGTACCCGGCGCCCGTGGTGTACCCGCACCACTCCCGCCAGATCTCCTGGAAGCCCAGGGTGTTCCTCTACCAGCATTTCCTCAGCGACGACGAGGCCAACCACCTCGTCTCCCTCGCGAGAACGGAGCTCAAGAGGTCAGCGGTGGCTGATAACCTGTCCGGCAAGAGCGAGCTCAGCGACGCCCGCACCAGCTCCGGCACCTTCATCCGCAAGAGCCAGGATCCAATTGTTGCTGGTATAGAGGAAAAAATTGCTGCGTGGACATTTCTTCCTAAAGAGAATGGTGAGGATATCCAAGTGTTAAGGTATAAGCACGGCGAGAAGTATGAACGGCACTATGATTACTTCAGCGACAATGTTAACACTCTCCGTGGTGGTCATCGCATAGCTACTGTTCTTATGTACTTAACAGATGTTGCAGAAGGTGGAGAAACAGTTTTCCCTCTAGCTGAGGAGTTTACAGAAAGTGGCACAAACAATGAAGATTCAACCTTGTCAGAATGTGCTAAAAAAGGTGTTGCAGTGAAACCACGAAAAGGGGATGCACTTCTGTTCTTCAACCTTAGCCCAGATGCTTCAAAAGATTCATTGAGCCTCCACGCTGGATGCCCAGTCATAAAGGGTGAGAAATGGTCTGCTACAAAGTGGATTCGTGTAGCCTCATTCGACAAGGTTTATCACACACAAGGCAATTGCACTGACGACAATGAGAGTTGTGAAAAATGGGCTGCCTTGGGAGAGTGCATAAAGAACCCAGAATACATGATTGGAACAGCAGCATTACCAGGTTACTGCAGGAAGAGTTGCAACATATGTTAGCGATCCAATTGTAAATAATCAACGGTAACTGCTTTGTCGGCAGTCTGATTTATACAGGAATGGGTTAAAATAAGTAGGTTCATGAGGTTTTTGGCACAAATTCTACCAGTTTTGGTTACTTCCTGATGACAACTTGGTTTTTGTTACCATTCTTCAATGGTAACTGGCAGGAATTAGAAAGCAACTCATTGTTAGTATCCATAATTTATGCTAGATGGAGATGCACTTTATCAGTGCAATTTCTTTGGAGAGCAGGTTTTTGTTTTTATTTCATAGAGTTGTCGACTTGAGCCTACTAGGTTATGGTTGGATTCTGCCAGAATTTACAAACATCTGGTCTGGTTTTCATCTGTAATCCTTGAGTTGTCGACTTGAACCTACTAGGTCATGGTTAGATCCTGCCAGAATTTACAAACATCTGGCCTGGTTTTCATACCTGTAATCCTTCTCATTTGTGGTATATAGCTTCAGTGATTTTTGAATTCATTAATCAAATCTCT                         ]
[+] EMBL CB000769             [                                                                                                                                                                                                 CACCAGCTCCGGCACCTTCATCCGCAAGAGCCAGGATCCAATTGTTGCTGGTATAGAGGAAAAAATTGCTGCGTGGACATTTCTTCCTAAAGAGAATGGTGAGGATATCCAAGTGTTAAGGTATAAGCACGGCGAGAAGTATGAACGGCACTATGATTACTTCAGCGACAATGTTAACACTCTCCGTGGTGGTCATCGCATAGCTACTGTTCTTATGTACTTAACAGATGTTGCAGAAGGTGGAGAAACAGTTTTCCCTCTAGCTGAGGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CA763341             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                tgGACAAGG TTGTCCCCCACAAGGCAAATGCCCTGCCGTCCATGAGAGGTGTGAACAATGGCCTCCCTCGGGAGAGTGCATAAAGAACCCAGAATGCATGATTGGAACAGCAGCATTACCAGGTTACTCCAGGAAGAGTTGCAACGTATGTCACCGATCCGATTGTAAATAATCAACGGTAACTGCTTTGTAGGCAGTCTGATTTATACAGGAATGGGTTAAAATAAGTAGGTTCATGAGGTTTTTGGCACAAATTCTCCCAGTTTTGGTTACTTCCTGATGACAACTTGGTTTTTGTTACCATTCTTCAATGGTAACTGGCAGGAATTAGAAAGCAACTCATTGTTAGTATCCATAATTTATGCTAGATGGAGATGCCCTTTATCAGTGCAATTTCTTTGGAGAGCAGGTTTTTGTTTTTATTTCATAGAGTTGTCGACTTGAGCCTACTAGGTTATGGTTGGATCCTGCCAAAATTTACAAACATCTGGTCTGGTTTTCATCTGTAATCCTTGAGTTGTCGACTTGAACCTACTAGGTCATGGTTAGATCCTGCCAGAATTTACAAACATCTGGCCTGGTTTTCATACCTGTAATCCTTCTCATTTGTGGTATATAGCTTCAGTGATTTTTGAATTCATTAATCAAATCTCTTTATCCCTCTAAAAAAAAAAAAAAA]




>consensus_4171#0
GCTCGGTGTACCCGGCGCCCGTGGTGTACCCGCACCACTCCCGCCAGATCTCCTGGAAGC
CCAGGGTGTTCCTCTACCAGCATTTCCTCAGCGACGACGAGGCCAACCACCTCGTCTCCC
TCGCGAGAACGGAGCTCAAGAGGTCAGCGGTGGCTGATAACCTGTCCGGCAAGAGCGAGC
TCAGCGACGCCCGCACCAGCTCCGGCACCTTCATCCGCAAGAGCCAGGATCCAATTGTTG
CTGGTATAGAGGAAAAAATTGCTGCGTGGACATTTCTTCCTAAAGAGAATGGTGAGGATA
TCCAAGTGTTAAGGTATAAGCACGGCGAGAAGTATGAACGGCACTATGATTACTTCAGCG
ACAATGTTAACACTCTCCGTGGTGGTCATCGCATAGCTACTGTTCTTATGTACTTAACAG
ATGTTGCAGAAGGTGGAGAAACAGTTTTCCCTCTAGCTGAGGAGTTTACAGAAAGTGGCA
CAAACAATGAAGATTCAACCTTGTCAGAATGTGCTAAAAAAGGTGTTGCAGTGAAACCAC
GAAAAGGGGATGCACTTCTGTTCTTCAACCTTAGCCCAGATGCTTCAAAAGATTCATTGA
GCCTCCACGCTGGATGCCCAGTCATAAAGGGTGAGAAATGGTCTGCTACAAAGTGGATTC
GTGTAGCCTCATTCGACAAGGTTTATCACACACAAGGCAATTGCACTGACGACAATGAGA
GTTGTGAAAAATGGGCTGCCTTGGGAGAGTGCATAAAGAACCCAGAATACATGATTGGAA
CAGCAGCATTACCAGGTTACTGCAGGAAGAGTTGCAACATATGTTAGCGATCCAATTGTA
AATAATCAACGGTAACTGCTTTGTCGGCAGTCTGATTTATACAGGAATGGGTTAAAATAA
GTAGGTTCATGAGGTTTTTGGCACAAATTCTACCAGTTTTGGTTACTTCCTGATGACAAC
TTGGTTTTTGTTACCATTCTTCAATGGTAACTGGCAGGAATTAGAAAGCAACTCATTGTT
AGTATCCATAATTTATGCTAGATGGAGATGCACTTTATCAGTGCAATTTCTTTGGAGAGC
AGGTTTTTGTTTTTATTTCATAGAGTTGTCGACTTGAGCCTACTAGGTTATGGTTGGATT
CTGCCAGAATTTACAAACATCTGGTCTGGTTTTCATCTGTAATCCTTGAGTTGTCGACTT
GAACCTACTAGGTCATGGTTAGATCCTGCCAGAATTTACAAACATCTGGCCTGGTTTTCA
TACCTGTAATCCTTCTCATTTGTGGTATATAGCTTCAGTGATTTTTGAATTCATTAATCA
AATCTCTTTATCCCTCTAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)