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Oryza sativa
cluster # 4481 cluster # 4481       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4481#0 length = 3604 sequences # 1  
 consensus_4481#1 length = 497 sequences # 2  
consensusID : consensus_4481#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3604
fasta sequence 
                              [CTTCCCTCCGCCAATTCCAGGCAGTTCTAGCAAAAAGGTGCCTCGGATGAATCGGGGGCTCCAGTAGGGAGAGGAGATGATCACTCGAGCGAAGCTGGTGGAGCAGCTGAGAGAGCACCAGATCCGGTCGGCGCAGTCCTACTCCGCCGCCCTCGCCGTCTTCTCGCCCAGCCCTCACATCGCCTCCAGGTAAAGGTCCCTCATCTTCTTGTTCCTGCTAAGATCTGATGCGACGCTGCTACAAACATGATGCGGTTAGGGCTTTTAGTTGGATTGCCCTGATTTTGGTGGTCTCCCTAGATTCAGTGTAATGATCAAAATCAGATTCGTCTCCCTAGATTCAGTGTAATGGTCTCCCTAGATTGGCTTATTCTTTGTTTTGCTTCCTTGATCATATGGGTATTGGATGATCTGTGTGAATAGTGGCAGTATTTTGTTTTTTGGTTAATTTCTGGTTGTAGCAGTGCACAACAAGAAGGGATTTTAGTCTCCTTTATTTGGGACTAAGTATGTGATATGGTTTGAGTAGGTAGAAATTCACAGTATGATATTAATAACTTCATGACTAATTATTAGCTGTGCACTCAATTGACGGCGCAATGTCTTGTGAAAATTAGAATTTCGAGGTCTCTACTAAGAGATCTTTTTTGACTTTTGTTTGAGACTAGGATTGTTAAAAAGCTCGGCCATACAATATCTATTCGATGGCAAGGTGTTGGATATATGATCTGAAGGGGCTCTAAGATAAGGCCCTCTTCTGTTTGTATGTGGGTGCTACTCAGCAATAGTCAAGACAATAGCATAGCTGTTGTGTTTTATTAGTATATTTGGATAAAACAACTTAATTATGCAACTTTTCATCTATTCCCATGATCATAGTCAACGGAGTACTAGAACAAACAACTGCATTCATGAATAATGATGCAAGCTATGGTGTCTTCACTTTTGTCAGTAGCTGAATACAACAATTTGTGAAGGAACTAAGGAAAAGAAAGGGGAACTGAATACTGTCAGCTAGTTGTAGTTTCCTATACCTGAGCAAAACTCATGCCTGCAGTGCATCGAGACTGTTTCATTTAAGCAACCTGGTGTTGGTCCAGGTTTGACAAAATTACCCAAAGCAATAGTGTTTGGTTGCTAACAGGCCTCACACTTAGTCACTTAAGAACCTGTCCTATCCCTAAACCTGGTCAAGCCCTGCCAACTTGCCAAGCCCACCTACCTTGGCCAGGCCAACCTCAGTTTGCTCAAGTTTAATTTTTACAACTTATCCAGTTATCCCTAGACTCAGGAATATGCCTAGCAAGTGGCAAGCACTGCATAAGTTTAGCACTTTATCCATTATATGCACTGCAGTGTAATGGAGAGGTGGCTAAGATGATATGGGATGTCCTCATGTCCATGTATGTAACCCATGTTTTAAGTTTGTTGATCACACCAATTCATGGCTTGCCATTTCATGCTTCAAGAGACTTGGATTGTCTGCATGGCATGGCGTGCCAGTTGGAAGGCTTATATGACAGCCAATGGCTAATTGATGGATTAATAAAGTGAATCTCATTGTCTGTTTAGGGCCTGTCCGAAAATAAATTATAGTTGAAGGAGCTAAGCAGGAATAAATAGGTCACTACAACTGATGCGAATAGACAGGCTTGGTCCAGTTGGTACTTAGTAGTAACATTTCTATTAAAGAAAAGATTGGCCATTTATTTTTTTCTGTTTTTTTGTTTGTTCTATTTTTTGGTTTAGTTTTCATTGGCTAAACCATCATATTTCTTTAGTACTACAAAAAGAACGACTCACGATTTTCCAAAGTTCAACATCAAGTCCATCACTTGAGTTGTGGCCTTACAAACAATATACCATAAGATAAACCTGCGACCTTGAAGAACCTTTAAAAAATGGTGCTTTGTGTTAGGGTTTAGGACTTATGATGAAAAGTTCATAGTAGAGATAGTATGTTTATGTTTATAATTTTGAACAGAGTCTTTTTTACCCACTATTTGTTACATCTATTATCTATTATGCCAGAAACTTGCTTTTATTTATCTTGCAAGATGGGCAGCTTCCCTTTCTCATACGAAGAGGCAGTCATGAAAATGTTGCAGTGAATATTTGAATTTAGCTGTAATGCTTTATACATGCTTCTGCATAAATGTGTATATAAAATATAGTGGATGCCAGACTTATAGGAGCAAGCGAATGTTGCTTTAAACTGTTTTCACGAACACTTTACTGTGTAGTCTACAGTGTTCTGTAAACGGGTCTACTAGGCTGTTTATTAGGCTACATAAAGGGAACTGATGCTCATAACTGTCGGGTTGCCAGTGAGACTACAGTCCAGCTAAGCCATATTAACACTACTAGGTAGGTGACCAATACGAGGAAGGTGACTGAATGAAAACCGGTTACTGATTTTTAGAAACTAGGCAATCTACTTTGTTGTGTACTCTGTTTTCTGATTATATGTATTTACTTAATGTTGTCTAAGCAAAACCTATTGGCCAGTGAATCATCTTATATTTTCCATGCAGCATTGCTGTCATTTTATACATGACTGATGACACTTGTGGTACTGAATTAAGGCTTGTAACTGTCTTCAAAATATTTAGTTGTAGTGCTAACATAAACTATGCTTTGTGTTGGACCCCTACAAACCTATTTTGTTTGATTCCCTACAGTCTGCATCCAAAGTAATTGTAACTATTGAAACTAAAAGACAAATTGATAATGAATGCCTTCGATTTTCATTGCAACAGAGGATTTTCATTCTATCATAGAATTCACTATCCTGAATTGTACTACTTCCGCCCCGTAATATAAGGGATTTTGGAGACTTATATTATGGGACGGAGGGAGTATTATATTAGGCAATTTTGTGACATACTTAGCTTGTGCTGGAGTGAATAAAGGAAACATCGAGTTTATAGTGAACACAATGTGCTCATTTTTCCAATTGAATGCGATAGTCCTGAAATTGTTCATACCCTTTCTCAGAGTTAAGAACTAGCAAACTGAATGTAGCATGGTTAATGCAAATGAGCTCTTAGTATTTGCAATCTGGAAATCCTTGTTGATTTTTTAAAGTCTAAACTACTATATAGAAAGTATCTTGCTTGTCTATAATGAAACTGATAGAGGAAATACTATAGCTTGTGAAAATGAGCTTTAGGTAGGTATTCGCAACTGGAATTCCTAGGTGATTTTCATTTCGGTAGGCCGGTAGCACAATATATAATCTGTTGGTTGTTGCTATCCTGCTTCTGCTTCTGTTTTGACTTCTGAGGCCTTTGTTATTGCTCTTAAATCCATGATCCTTTATGTTGCAGGCGGGATCTCAAGGTTGCTCTCTTCTATGCTATCTTGTTTTGTTTTGTCATGGTGTCCTGCTATGTTGCCCTTTACTTGAGATGGTTCAGACTTTCAGCCATCTTTGTAGTTTTCGGAATTCTCCTTCCAGTAGGTCTCAAAATATCTAGGCATAGAAGGCTGAAGAGGAAAAGAGAAAGGAGATTGTTGTTACCTTTGTCCATGTGAATATATTTTTGATATCTTGTAACATTGTAGTAAAACCGCGCAACTGCAAATAGGAAATTGCCTGCTT]

[+] EMBL AK072301             [CTTCCCTCCGCCAATTCCAGGCAGTTCTAGCAAAAAGGTGCCTCGGATGAATCGGGGGCTCCAGTAGGGAGAGGAGATGATCACTCGAGCGAAGCTGGTGGAGCAGCTGAGAGAGCACCAGATCCGGTCGGCGCAGTCCTACTCCGCCGCCCTCGCCGTCTTCTCGCCCAGCCCTCACATCGCCTCCAGGTAAAGGTCCCTCATCTTCTTGTTCCTGCTAAGATCTGATGCGACGCTGCTACAAACATGATGCGGTTAGGGCTTTTAGTTGGATTGCCCTGATTTTGGTGGTCTCCCTAGATTCAGTGTAATGATCAAAATCAGATTCGTCTCCCTAGATTCAGTGTAATGGTCTCCCTAGATTGGCTTATTCTTTGTTTTGCTTCCTTGATCATATGGGTATTGGATGATCTGTGTGAATAGTGGCAGTATTTTGTTTTTTGGTTAATTTCTGGTTGTAGCAGTGCACAACAAGAAGGGATTTTAGTCTCCTTTATTTGGGACTAAGTATGTGATATGGTTTGAGTAGGTAGAAATTCACAGTATGATATTAATAACTTCATGACTAATTATTAGCTGTGCACTCAATTGACGGCGCAATGTCTTGTGAAAATTAGAATTTCGAGGTCTCTACTAAGAGATCTTTTTTGACTTTTGTTTGAGACTAGGATTGTTAAAAAGCTCGGCCATACAATATCTATTCGATGGCAAGGTGTTGGATATATGATCTGAAGGGGCTCTAAGATAAGGCCCTCTTCTGTTTGTATGTGGGTGCTACTCAGCAATAGTCAAGACAATAGCATAGCTGTTGTGTTTTATTAGTATATTTGGATAAAACAACTTAATTATGCAACTTTTCATCTATTCCCATGATCATAGTCAACGGAGTACTAGAACAAACAACTGCATTCATGAATAATGATGCAAGCTATGGTGTCTTCACTTTTGTCAGTAGCTGAATACAACAATTTGTGAAGGAACTAAGGAAAAGAAAGGGGAACTGAATACTGTCAGCTAGTTGTAGTTTCCTATACCTGAGCAAAACTCATGCCTGCAGTGCATCGAGACTGTTTCATTTAAGCAACCTGGTGTTGGTCCAGGTTTGACAAAATTACCCAAAGCAATAGTGTTTGGTTGCTAACAGGCCTCACACTTAGTCACTTAAGAACCTGTCCTATCCCTAAACCTGGTCAAGCCCTGCCAACTTGCCAAGCCCACCTACCTTGGCCAGGCCAACCTCAGTTTGCTCAAGTTTAATTTTTACAACTTATCCAGTTATCCCTAGACTCAGGAATATGCCTAGCAAGTGGCAAGCACTGCATAAGTTTAGCACTTTATCCATTATATGCACTGCAGTGTAATGGAGAGGTGGCTAAGATGATATGGGATGTCCTCATGTCCATGTATGTAACCCATGTTTTAAGTTTGTTGATCACACCAATTCATGGCTTGCCATTTCATGCTTCAAGAGACTTGGATTGTCTGCATGGCATGGCGTGCCAGTTGGAAGGCTTATATGACAGCCAATGGCTAATTGATGGATTAATAAAGTGAATCTCATTGTCTGTTTAGGGCCTGTCCGAAAATAAATTATAGTTGAAGGAGCTAAGCAGGAATAAATAGGTCACTACAACTGATGCGAATAGACAGGCTTGGTCCAGTTGGTACTTAGTAGTAACATTTCTATTAAAGAAAAGATTGGCCATTTATTTTTTTCTGTTTTTTTGTTTGTTCTATTTTTTGGTTTAGTTTTCATTGGCTAAACCATCATATTTCTTTAGTACTACAAAAAGAACGACTCACGATTTTCCAAAGTTCAACATCAAGTCCATCACTTGAGTTGTGGCCTTACAAACAATATACCATAAGATAAACCTGCGACCTTGAAGAACCTTTAAAAAATGGTGCTTTGTGTTAGGGTTTAGGACTTATGATGAAAAGTTCATAGTAGAGATAGTATGTTTATGTTTATAATTTTGAACAGAGTCTTTTTTACCCACTATTTGTTACATCTATTATCTATTATGCCAGAAACTTGCTTTTATTTATCTTGCAAGATGGGCAGCTTCCCTTTCTCATACGAAGAGGCAGTCATGAAAATGTTGCAGTGAATATTTGAATTTAGCTGTAATGCTTTATACATGCTTCTGCATAAATGTGTATATAAAATATAGTGGATGCCAGACTTATAGGAGCAAGCGAATGTTGCTTTAAACTGTTTTCACGAACACTTTACTGTGTAGTCTACAGTGTTCTGTAAACGGGTCTACTAGGCTGTTTATTAGGCTACATAAAGGGAACTGATGCTCATAACTGTCGGGTTGCCAGTGAGACTACAGTCCAGCTAAGCCATATTAACACTACTAGGTAGGTGACCAATACGAGGAAGGTGACTGAATGAAAACCGGTTACTGATTTTTAGAAACTAGGCAATCTACTTTGTTGTGTACTCTGTTTTCTGATTATATGTATTTACTTAATGTTGTCTAAGCAAAACCTATTGGCCAGTGAATCATCTTATATTTTCCATGCAGCATTGCTGTCATTTTATACATGACTGATGACACTTGTGGTACTGAATTAAGGCTTGTAACTGTCTTCAAAATATTTAGTTGTAGTGCTAACATAAACTATGCTTTGTGTTGGACCCCTACAAACCTATTTTGTTTGATTCCCTACAGTCTGCATCCAAAGTAATTGTAACTATTGAAACTAAAAGACAAATTGATAATGAATGCCTTCGATTTTCATTGCAACAGAGGATTTTCATTCTATCATAGAATTCACTATCCTGAATTGTACTACTTCCGCCCCGTAATATAAGGGATTTTGGAGACTTATATTATGGGACGGAGGGAGTATTATATTAGGCAATTTTGTGACATACTTAGCTTGTGCTGGAGTGAATAAAGGAAACATCGAGTTTATAGTGAACACAATGTGCTCATTTTTCCAATTGAATGCGATAGTCCTGAAATTGTTCATACCCTTTCTCAGAGTTAAGAACTAGCAAACTGAATGTAGCATGGTTAATGCAAATGAGCTCTTAGTATTTGCAATCTGGAAATCCTTGTTGATTTTTTAAAGTCTAAACTACTATATAGAAAGTATCTTGCTTGTCTATAATGAAACTGATAGAGGAAATACTATAGCTTGTGAAAATGAGCTTTAGGTAGGTATTCGCAACTGGAATTCCTAGGTGATTTTCATTTCGGTAGGCCGGTAGCACAATATATAATCTGTTGGTTGTTGCTATCCTGCTTCTGCTTCTGTTTTGACTTCTGAGGCCTTTGTTATTGCTCTTAAATCCATGATCCTTTATGTTGCAGGCGGGATCTCAAGGTTGCTCTCTTCTATGCTATCTTGTTTTGTTTTGTCATGGTGTCCTGCTATGTTGCCCTTTACTTGAGATGGTTCAGACTTTCAGCCATCTTTGTAGTTTTCGGAATTCTCCTTCCAGTAGGTCTCAAAATATCTAGGCATAGAAGGCTGAAGAGGAAAAGAGAAAGGAGATTGTTGTTACCTTTGTCCATGTGAATATATTTTTGATATCTTGTAACATTGTAGTAAAACCGCGCAACTGCAAATAGGAAATTGCCTGCTT]




>consensus_4481#0
CTTCCCTCCGCCAATTCCAGGCAGTTCTAGCAAAAAGGTGCCTCGGATGAATCGGGGGCT
CCAGTAGGGAGAGGAGATGATCACTCGAGCGAAGCTGGTGGAGCAGCTGAGAGAGCACCA
GATCCGGTCGGCGCAGTCCTACTCCGCCGCCCTCGCCGTCTTCTCGCCCAGCCCTCACAT
CGCCTCCAGGTAAAGGTCCCTCATCTTCTTGTTCCTGCTAAGATCTGATGCGACGCTGCT
ACAAACATGATGCGGTTAGGGCTTTTAGTTGGATTGCCCTGATTTTGGTGGTCTCCCTAG
ATTCAGTGTAATGATCAAAATCAGATTCGTCTCCCTAGATTCAGTGTAATGGTCTCCCTA
GATTGGCTTATTCTTTGTTTTGCTTCCTTGATCATATGGGTATTGGATGATCTGTGTGAA
TAGTGGCAGTATTTTGTTTTTTGGTTAATTTCTGGTTGTAGCAGTGCACAACAAGAAGGG
ATTTTAGTCTCCTTTATTTGGGACTAAGTATGTGATATGGTTTGAGTAGGTAGAAATTCA
CAGTATGATATTAATAACTTCATGACTAATTATTAGCTGTGCACTCAATTGACGGCGCAA
TGTCTTGTGAAAATTAGAATTTCGAGGTCTCTACTAAGAGATCTTTTTTGACTTTTGTTT
GAGACTAGGATTGTTAAAAAGCTCGGCCATACAATATCTATTCGATGGCAAGGTGTTGGA
TATATGATCTGAAGGGGCTCTAAGATAAGGCCCTCTTCTGTTTGTATGTGGGTGCTACTC
AGCAATAGTCAAGACAATAGCATAGCTGTTGTGTTTTATTAGTATATTTGGATAAAACAA
CTTAATTATGCAACTTTTCATCTATTCCCATGATCATAGTCAACGGAGTACTAGAACAAA
CAACTGCATTCATGAATAATGATGCAAGCTATGGTGTCTTCACTTTTGTCAGTAGCTGAA
TACAACAATTTGTGAAGGAACTAAGGAAAAGAAAGGGGAACTGAATACTGTCAGCTAGTT
GTAGTTTCCTATACCTGAGCAAAACTCATGCCTGCAGTGCATCGAGACTGTTTCATTTAA
GCAACCTGGTGTTGGTCCAGGTTTGACAAAATTACCCAAAGCAATAGTGTTTGGTTGCTA
ACAGGCCTCACACTTAGTCACTTAAGAACCTGTCCTATCCCTAAACCTGGTCAAGCCCTG
CCAACTTGCCAAGCCCACCTACCTTGGCCAGGCCAACCTCAGTTTGCTCAAGTTTAATTT
TTACAACTTATCCAGTTATCCCTAGACTCAGGAATATGCCTAGCAAGTGGCAAGCACTGC
ATAAGTTTAGCACTTTATCCATTATATGCACTGCAGTGTAATGGAGAGGTGGCTAAGATG
ATATGGGATGTCCTCATGTCCATGTATGTAACCCATGTTTTAAGTTTGTTGATCACACCA
ATTCATGGCTTGCCATTTCATGCTTCAAGAGACTTGGATTGTCTGCATGGCATGGCGTGC
CAGTTGGAAGGCTTATATGACAGCCAATGGCTAATTGATGGATTAATAAAGTGAATCTCA
TTGTCTGTTTAGGGCCTGTCCGAAAATAAATTATAGTTGAAGGAGCTAAGCAGGAATAAA
TAGGTCACTACAACTGATGCGAATAGACAGGCTTGGTCCAGTTGGTACTTAGTAGTAACA
TTTCTATTAAAGAAAAGATTGGCCATTTATTTTTTTCTGTTTTTTTGTTTGTTCTATTTT
TTGGTTTAGTTTTCATTGGCTAAACCATCATATTTCTTTAGTACTACAAAAAGAACGACT
CACGATTTTCCAAAGTTCAACATCAAGTCCATCACTTGAGTTGTGGCCTTACAAACAATA
TACCATAAGATAAACCTGCGACCTTGAAGAACCTTTAAAAAATGGTGCTTTGTGTTAGGG
TTTAGGACTTATGATGAAAAGTTCATAGTAGAGATAGTATGTTTATGTTTATAATTTTGA
ACAGAGTCTTTTTTACCCACTATTTGTTACATCTATTATCTATTATGCCAGAAACTTGCT
TTTATTTATCTTGCAAGATGGGCAGCTTCCCTTTCTCATACGAAGAGGCAGTCATGAAAA
TGTTGCAGTGAATATTTGAATTTAGCTGTAATGCTTTATACATGCTTCTGCATAAATGTG
TATATAAAATATAGTGGATGCCAGACTTATAGGAGCAAGCGAATGTTGCTTTAAACTGTT
TTCACGAACACTTTACTGTGTAGTCTACAGTGTTCTGTAAACGGGTCTACTAGGCTGTTT
ATTAGGCTACATAAAGGGAACTGATGCTCATAACTGTCGGGTTGCCAGTGAGACTACAGT
CCAGCTAAGCCATATTAACACTACTAGGTAGGTGACCAATACGAGGAAGGTGACTGAATG
AAAACCGGTTACTGATTTTTAGAAACTAGGCAATCTACTTTGTTGTGTACTCTGTTTTCT
GATTATATGTATTTACTTAATGTTGTCTAAGCAAAACCTATTGGCCAGTGAATCATCTTA
TATTTTCCATGCAGCATTGCTGTCATTTTATACATGACTGATGACACTTGTGGTACTGAA
TTAAGGCTTGTAACTGTCTTCAAAATATTTAGTTGTAGTGCTAACATAAACTATGCTTTG
TGTTGGACCCCTACAAACCTATTTTGTTTGATTCCCTACAGTCTGCATCCAAAGTAATTG
TAACTATTGAAACTAAAAGACAAATTGATAATGAATGCCTTCGATTTTCATTGCAACAGA
GGATTTTCATTCTATCATAGAATTCACTATCCTGAATTGTACTACTTCCGCCCCGTAATA
TAAGGGATTTTGGAGACTTATATTATGGGACGGAGGGAGTATTATATTAGGCAATTTTGT
GACATACTTAGCTTGTGCTGGAGTGAATAAAGGAAACATCGAGTTTATAGTGAACACAAT
GTGCTCATTTTTCCAATTGAATGCGATAGTCCTGAAATTGTTCATACCCTTTCTCAGAGT
TAAGAACTAGCAAACTGAATGTAGCATGGTTAATGCAAATGAGCTCTTAGTATTTGCAAT
CTGGAAATCCTTGTTGATTTTTTAAAGTCTAAACTACTATATAGAAAGTATCTTGCTTGT
CTATAATGAAACTGATAGAGGAAATACTATAGCTTGTGAAAATGAGCTTTAGGTAGGTAT
TCGCAACTGGAATTCCTAGGTGATTTTCATTTCGGTAGGCCGGTAGCACAATATATAATC
TGTTGGTTGTTGCTATCCTGCTTCTGCTTCTGTTTTGACTTCTGAGGCCTTTGTTATTGC
TCTTAAATCCATGATCCTTTATGTTGCAGGCGGGATCTCAAGGTTGCTCTCTTCTATGCT
ATCTTGTTTTGTTTTGTCATGGTGTCCTGCTATGTTGCCCTTTACTTGAGATGGTTCAGA
CTTTCAGCCATCTTTGTAGTTTTCGGAATTCTCCTTCCAGTAGGTCTCAAAATATCTAGG
CATAGAAGGCTGAAGAGGAAAAGAGAAAGGAGATTGTTGTTACCTTTGTCCATGTGAATA
TATTTTTGATATCTTGTAACATTGTAGTAAAACCGCGCAACTGCAAATAGGAAATTGCCT
GCTT

consensusID : consensus_4481#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 497
fasta sequence 
                              [TATTTTCCCTCTTGTTCTTCTCTTCCCTCCGCCAATTCCAGGCAGTTCTAGCAAAAAGGTGCCTCGGATGAATCGGGGGCTCCAGTAGGGAGAGGAGATGATCACTCGAGCGA-AGCTGGTGGAGCAGCTG-AGAGAGCACCAGATCCGGTC-GGCGCAGTCCTACTCCGCCGCCCTCGCCGTCTTCTCGCCCAGCCCTCACATCGCCTCCAGGCGGGATCTCAAGGTTGCTCTCTTCTATGCTATCTTGTTTTGTTTTGTCATGGTGTCCTGCTATGTTGCCCTTTACTTGAGATGGTTCAGACTTTCAGCCATCTTTGTAGTTTTCGGAATTCTCCTTCCAGTAGGTCTCAAAATATCTAGGCATAGAAGGCTGAAGAGGAAAAGAGAAAGGAGATTGTTGTTACCTTTGTCCATGTGAATATATTTTTGATATCTTGTAACATTGTAGTAAAACCGCGCAACTGCAAATAGGAAATTGCCTGCTTTACTTAATTTAC]

[+] EMBL AK063077             [TATTTTCCCTCTTGTTCTTCTCTTCCCTCCGCCAATTCCAGGCAGTTCTAGCAAAAAGGTGCCTCGGATGAATCGGGGGCTCCAGTAGGGAGAGGAGATGATCACTCGAGCGA AGCTGGTGGAGCAGCTG AGAGAGCACCAGATCCGGTC GGCGCAGTCCTACTCCGCCGCCCTCGCCGTCTTCTCGCCCAGCCCTCACATCGCCTCCAGGCGGGATCTCAAGGTTGCTCTCTTCTATGCTATCTTGTTTTGTTTTGTCATGGTGTCCTGCTATGTTGCCCTTTACTTGAGATGGTTCAGACTTTCAGCCATCTTTGTAGTTTTCGGAATTCTCCTTCCAGTAGGTCTCAAAATATCTAGGCATAGAAGGCTGAAGAGGAAAAGAGAAAGGAGATTGTTGTTACCTTTGTCCATGTGAATATATTTTTGATATCTTGTAACATTGTAGTAAAACC                                          ]
[+] EMBL CA752611             [                                                                                                         TCTAGCGACAGCTGGTGGAGCAGCTGAAGA AGCACCACATCCGGTCGGGAGCAGTCCTACTCCGCCGCCCTCGCCGTCTTCTCGCCCAGCCCTCACATCGCCTCCAGGCGGGATCTCAAGGTTGCTCTCTTCTA GCTATCTTGTTTTGTTTTGTCATGGTGTCCTGCTATGTTGCCCTTTACTTGAAATGGTTCA ACTTTCAGCCATCTTTGTAG TTTCGGAATTCTCCTTCCAGTAGGTCTCAAAATATCTAGGCATA AAGGCTG AGAGGAAAAGAGAAAGGAGATTGTTG TACCTTTGTCCATGTGAATATATTTTTGATATCTTGTAACATTGTAGTAAAACCGCGCAACTGCAAATAGGAAATTGCCTGCTTTACTTAATTTAC]




>consensus_4481#1
TATTTTCCCTCTTGTTCTTCTCTTCCCTCCGCCAATTCCAGGCAGTTCTAGCAAAAAGGT
GCCTCGGATGAATCGGGGGCTCCAGTAGGGAGAGGAGATGATCACTCGAGCGAAGCTGGT
GGAGCAGCTGAGAGAGCACCAGATCCGGTCGGCGCAGTCCTACTCCGCCGCCCTCGCCGT
CTTCTCGCCCAGCCCTCACATCGCCTCCAGGCGGGATCTCAAGGTTGCTCTCTTCTATGC
TATCTTGTTTTGTTTTGTCATGGTGTCCTGCTATGTTGCCCTTTACTTGAGATGGTTCAG
ACTTTCAGCCATCTTTGTAGTTTTCGGAATTCTCCTTCCAGTAGGTCTCAAAATATCTAG
GCATAGAAGGCTGAAGAGGAAAAGAGAAAGGAGATTGTTGTTACCTTTGTCCATGTGAAT
ATATTTTTGATATCTTGTAACATTGTAGTAAAACCGCGCAACTGCAAATAGGAAATTGCC
TGCTTTACTTAATTTAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4481#0      CTTCCCTCCGCCAATTCCAGGCAGTTCTAGCAAAAAGGTGCCTCGGATGAATCGGGGGCT 60
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      CCAGTAGGGAGAGGAGATGATCACTCGAGCGAAGCTGGTGGAGCAGCTGAGAGAGCACCA 120
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      GATCCGGTCGGCGCAGTCCTACTCCGCCGCCCTCGCCGTCTTCTCGCCCAGCCCTCACAT 180
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      CGCCTCCAGGTAAAGGTCCCTCATCTTCTTGTTCCTGCTAAGATCTGATGCGACGCTGCT 240
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      ACAAACATGATGCGGTTAGGGCTTTTAGTTGGATTGCCCTGATTTTGGTGGTCTCCCTAG 300
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      ATTCAGTGTAATGATCAAAATCAGATTCGTCTCCCTAGATTCAGTGTAATGGTCTCCCTA 360
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      GATTGGCTTATTCTTTGTTTTGCTTCCTTGATCATATGGGTATTGGATGATCTGTGTGAA 420
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TAGTGGCAGTATTTTGTTTTTTGGTTAATTTCTGGTTGTAGCAGTGCACAACAAGAAGGG 480
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      ATTTTAGTCTCCTTTATTTGGGACTAAGTATGTGATATGGTTTGAGTAGGTAGAAATTCA 540
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      CAGTATGATATTAATAACTTCATGACTAATTATTAGCTGTGCACTCAATTGACGGCGCAA 600
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TGTCTTGTGAAAATTAGAATTTCGAGGTCTCTACTAAGAGATCTTTTTTGACTTTTGTTT 660
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      GAGACTAGGATTGTTAAAAAGCTCGGCCATACAATATCTATTCGATGGCAAGGTGTTGGA 720
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TATATGATCTGAAGGGGCTCTAAGATAAGGCCCTCTTCTGTTTGTATGTGGGTGCTACTC 780
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      AGCAATAGTCAAGACAATAGCATAGCTGTTGTGTTTTATTAGTATATTTGGATAAAACAA 840
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      CTTAATTATGCAACTTTTCATCTATTCCCATGATCATAGTCAACGGAGTACTAGAACAAA 900
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      CAACTGCATTCATGAATAATGATGCAAGCTATGGTGTCTTCACTTTTGTCAGTAGCTGAA 960
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TACAACAATTTGTGAAGGAACTAAGGAAAAGAAAGGGGAACTGAATACTGTCAGCTAGTT 1020
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      GTAGTTTCCTATACCTGAGCAAAACTCATGCCTGCAGTGCATCGAGACTGTTTCATTTAA 1080
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      GCAACCTGGTGTTGGTCCAGGTTTGACAAAATTACCCAAAGCAATAGTGTTTGGTTGCTA 1140
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      ACAGGCCTCACACTTAGTCACTTAAGAACCTGTCCTATCCCTAAACCTGGTCAAGCCCTG 1200
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      CCAACTTGCCAAGCCCACCTACCTTGGCCAGGCCAACCTCAGTTTGCTCAAGTTTAATTT 1260
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TTACAACTTATCCAGTTATCCCTAGACTCAGGAATATGCCTAGCAAGTGGCAAGCACTGC 1320
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      ATAAGTTTAGCACTTTATCCATTATATGCACTGCAGTGTAATGGAGAGGTGGCTAAGATG 1380
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      ATATGGGATGTCCTCATGTCCATGTATGTAACCCATGTTTTAAGTTTGTTGATCACACCA 1440
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      ATTCATGGCTTGCCATTTCATGCTTCAAGAGACTTGGATTGTCTGCATGGCATGGCGTGC 1500
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      CAGTTGGAAGGCTTATATGACAGCCAATGGCTAATTGATGGATTAATAAAGTGAATCTCA 1560
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TTGTCTGTTTAGGGCCTGTCCGAAAATAAATTATAGTTGAAGGAGCTAAGCAGGAATAAA 1620
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TAGGTCACTACAACTGATGCGAATAGACAGGCTTGGTCCAGTTGGTACTTAGTAGTAACA 1680
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TTTCTATTAAAGAAAAGATTGGCCATTTATTTTTTTCTGTTTTTTTGTTTGTTCTATTTT 1740
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TTGGTTTAGTTTTCATTGGCTAAACCATCATATTTCTTTAGTACTACAAAAAGAACGACT 1800
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      CACGATTTTCCAAAGTTCAACATCAAGTCCATCACTTGAGTTGTGGCCTTACAAACAATA 1860
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TACCATAAGATAAACCTGCGACCTTGAAGAACCTTTAAAAAATGGTGCTTTGTGTTAGGG 1920
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TTTAGGACTTATGATGAAAAGTTCATAGTAGAGATAGTATGTTTATGTTTATAATTTTGA 1980
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      ACAGAGTCTTTTTTACCCACTATTTGTTACATCTATTATCTATTATGCCAGAAACTTGCT 2040
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TTTATTTATCTTGCAAGATGGGCAGCTTCCCTTTCTCATACGAAGAGGCAGTCATGAAAA 2100
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TGTTGCAGTGAATATTTGAATTTAGCTGTAATGCTTTATACATGCTTCTGCATAAATGTG 2160
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TATATAAAATATAGTGGATGCCAGACTTATAGGAGCAAGCGAATGTTGCTTTAAACTGTT 2220
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TTCACGAACACTTTACTGTGTAGTCTACAGTGTTCTGTAAACGGGTCTACTAGGCTGTTT 2280
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      ATTAGGCTACATAAAGGGAACTGATGCTCATAACTGTCGGGTTGCCAGTGAGACTACAGT 2340
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      CCAGCTAAGCCATATTAACACTACTAGGTAGGTGACCAATACGAGGAAGGTGACTGAATG 2400
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      AAAACCGGTTACTGATTTTTAGAAACTAGGCAATCTACTTTGTTGTGTACTCTGTTTTCT 2460
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      GATTATATGTATTTACTTAATGTTGTCTAAGCAAAACCTATTGGCCAGTGAATCATCTTA 2520
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TATTTTCCATGCAGCATTGCTGTCATTTTATACATGACTGATGACACTTGTGGTACTGAA 2580
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TTAAGGCTTGTAACTGTCTTCAAAATATTTAGTTGTAGTGCTAACATAAACTATGCTTTG 2640
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TGTTGGACCCCTACAAACCTATTTTGTTTGATTCCCTACAGTCTGCATCCAAAGTAATTG 2700
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TAACTATTGAAACTAAAAGACAAATTGATAATGAATGCCTTCGATTTTCATTGCAACAGA 2760
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      GGATTTTCATTCTATCATAGAATTCACTATCCTGAATTGTACTACTTCCGCCCCGTAATA 2820
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TAAGGGATTTTGGAGACTTATATTATGGGACGGAGGGAGTATTATATTAGGCAATTTTGT 2880
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      GACATACTTAGCTTGTGCTGGAGTGAATAAAGGAAACATCGAGTTTATAGTGAACACAAT 2940
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      GTGCTCATTTTTCCAATTGAATGCGATAGTCCTGAAATTGTTCATACCCTTTCTCAGAGT 3000
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      TAAGAACTAGCAAACTGAATGTAGCATGGTTAATGCAAATGAGCTCTTAGTATTTGCAAT 3060
consensus_4481#1      ------------------------------------------------------------
                                                                                  

consensus_4481#0      CTGGAAATCCTTGTTGATTTTTTAAAGTCTAAACTACTATATAGAAAGTATCTTGCTTGT 3120
consensus_4481#1      ---------------------------------------TATTTTCCCTCTTGTTCTTCT 21
                                                             ***      * *  * *** *

consensus_4481#0      CTATAATGAAACTGATAGAGGAAATACTATAGCTTGTGAAAATGAGCTTTAGGTAGGTAT 3180
consensus_4481#1      CTTCCCTCCGCCAATTCCAGGCAGTTCTA------GCAAAAAGGTGCCTCGGATGAATCG 75
                      **    *    *   *  *** * * ***      *  **** * ** *  * *   *  

consensus_4481#0      TCGCAACTGGAATTCCTAGGTGATTTTCATTTCGGT-AGGCCGGTAGCACAATATATAAT 3239
consensus_4481#1      GGGGCTCCAGTAGGGAGAGGAGATGATCACTCGAGCGAAGCTGGTGGAGCAGCTGAGAGA 135
                        *   *  * *     *** ***  *** *   *  * ** *** *  **    * *  

consensus_4481#0      CTGTTGGTTGTTGCTATCCTGCTTCTGCTTCTGTTTTGACTTCTGAGGCCTTTGTTATTG 3299
consensus_4481#1      GCACCAGATCCGGTCGGCGCAGTCCTACTCCG---CCGCCCTCGCCGTCTTCTCGCCCAG 192
                            * *   *    *    * ** ** *      * * **   * * * *      *

consensus_4481#0      CTCTTAAATCCATGATCCTTTATGTTGCAGGCGGGATCTCAAGGTTGCTCTCTTCTATGC 3359
consensus_4481#1      CCCTCACATC-----GCCTC-------CAGGCGGGATCTCAAGGTTGCTCTCTTCTATGC 240
                      * ** * ***      ***        *********************************

consensus_4481#0      TATCTTGTTTTGTTTTGTCATGGTGTCCTGCTATGTTGCCCTTTACTTGAGATGGTTCAG 3419
consensus_4481#1      TATCTTGTTTTGTTTTGTCATGGTGTCCTGCTATGTTGCCCTTTACTTGAGATGGTTCAG 300
                      ************************************************************

consensus_4481#0      ACTTTCAGCCATCTTTGTAGTTTTCGGAATTCTCCTTCCAGTAGGTCTCAAAATATCTAG 3479
consensus_4481#1      ACTTTCAGCCATCTTTGTAGTTTTCGGAATTCTCCTTCCAGTAGGTCTCAAAATATCTAG 360
                      ************************************************************

consensus_4481#0      GCATAGAAGGCTGAAGAGGAAAAGAGAAAGGAGATTGTTGTTACCTTTGTCCATGTGAAT 3539
consensus_4481#1      GCATAGAAGGCTGAAGAGGAAAAGAGAAAGGAGATTGTTGTTACCTTTGTCCATGTGAAT 420
                      ************************************************************

consensus_4481#0      ATATTTTTGATATCTTGTAACATTGTAGTAAAACCGCGCAACTGCAAATAGGAAATTGCC 3599
consensus_4481#1      ATATTTTTGATATCTTGTAACATTGTAGTAAAACCGCGCAACTGCAAATAGGAAATTGCC 480
                      ************************************************************

consensus_4481#0      TGCTT------------ 3604
consensus_4481#1      TGCTTTACTTAATTTAC 497
                      *****


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)