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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4860#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2613 fasta sequence
[CCTCATGTCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTCCCTGCCCTTCGCCCCCACGGCGCCGCTCTTTACCACGCTCATCTCCTCCCTCGCCGCCTCAGGGCGGCCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCCCACCGCCTCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGACAGCGTGTTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTGGGTCATCTCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCACATGCTCGAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTACTGCGAGCAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGGTTGCCCACCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGAATTCAGCACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGCTGTTACATATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATTTCGTCAAGTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATATTCTCTTCGATTGTTTGTGCCGAAATGCAATGTTTTCAGAAGCAGTGTGCTTGCTGGAACATAGTGAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGCTTTGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGGGCATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGAAACTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTTTCAATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTCGTACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTGATAGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGGTAAATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAAAAATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATACTTCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACAATTTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGAGCGCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAATGGTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGTCAGTTGGTGCCAGAAAATATATTATCTATAATATTAATGTCTTCACAAGATATTAATCTTTGTTAGGTTTTCAGGGGAGGAATAGCTGAGTTTGAACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATCAAGTTTAAATGTGCTTTTAGATAAATAATGGACAGAGAGGTATGCTTTTTTTTGGGGGGGCTTGTTCTGTATTTACTCCCACAAGGGCAATCCCTATGCTGAAATCATTGTATTATACCACCTCTGTTTTTTTGTGAAAGAAAATCATTGTTGTACTAGATATTTTTGGAGATGACATGTCCTTTTGTTGTAATTTTGACTCTTCAATAGAAACTTCAATAAGCCCCAGGTTCTTTTTAGAAAAACCGAATCTGACTTTCTTTTGTTTATTAATGGTGACAATCACCTAATGGTCTGAAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACAGAACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCAT]
[+] EMBL AK106411 [CCTCATGTCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTCCCTGCCCTTCGCCCCCACGGCGCCGCTCTTTACCACGCTCATCTCCTCCCTCGCCGCCTCAGGGCGGCCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCCCACCGCCTCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGACAGCGTGTTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTGGGTCATCTCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCACATGCTCGAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTACTGCGAGCAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGGTTGCCCACCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGAATTCAGCACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGCTGTTACATATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATTTCGTCAAGTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATATTCTCTTCGATTGTTTGTGCCGAAATGCAATGTTTTCAGAAGCAGTGTGCTTGCTGGAACATAGTGAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGCTTTGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGGGCATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGAAACTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTTTCAATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTCGTACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTGATAGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGGTAAATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAAAAATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATACTTCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACAATTTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGAGCGCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAATGGTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGTCAGTTGGTGCCAGAAAATATATTATCTATAATATTAATGTCTTCACAAGATATTAATCTTTGTTAGGTTTTCAGGGGAGGAATAGCTGAGTTTGAACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATCAAGTTTAAATGTGCTTTTAGATAAATAATGGACAGAGAGGTATGCTTTTTTTTGGGGGGGCTTGTTCTGTATTTACTCCCACAAGGGCAATCCCTATGCTGAAATCATTGTATTATACCACCTCTGTTTTTTTGTGAAAGAAAATCATTGTTGTACTAGATATTTTTGGAGATGACATGTCCTTTTGTTGTAATTTTGACTCTTCAATAGAAACTTCAATAAGCCCCAGGTTCTTTTTAGAAAAACCGAATCTGACTTTCTTTTGTTTATTAATGGTGACAATCACCTAATGGTCTGAAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACAGAACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCAT]
consensusID : consensus_4860#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2505 fasta sequence
[AAACACCGGCGCTCCCCACACCCCCGCCGCCGCCGGCCGCCGCCGCCTATGCCCTTCCGCCCCACGCTCCCCCGCCGGTGCTCCCACGACCCCAAGCTCTCCTCCTTCCTCTCCGCCCTCGCCTCCCTCACCGCCTCCCCCTCTTCCTCCTCCTCCTCCCCTTTGCCGCCCGCCGGCTCGGTGCCCGCCTCCCCCACCCCCGCCGCCTACAACGCCCTCATGTCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTCCCTGCCCTTCGCCCCCACGGCGCCGCTCTTCACCACGCTCATCTCCTCCCTCGCCGCCTCAGGGCGGCCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCCCACCGCCTCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGACAGCGTGTTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTGGGTCATCTCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCACATGCTCGAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTACTGCGAGCAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGGTTGCCCACCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGAATTCAGCACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGCTGTTACATATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATTTCGTCAAGTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATATTCTCTTCGATTGTTTGTGCCGAAATGCAATGTTTTCAGAAGCAGTGTGCTTGCTGGAACATAGTGAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGCTTTGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGGGCATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGAAACTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTTTCAATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTCGTACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTGATAGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGGTAAATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAAAAATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATACTTCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACAATTTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGAGCGCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAATGGTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGGGAGGAATAGCTGAGTTTGAACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATCAAGTTTAAATGTGCTTTTAGATAAATAATGGACAGAGAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACAGAACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCATTCTTCTGGTCAATTCAATAGGGAAATGTTGAT]
[+] EMBL AK102781 [AAACACCGGCGCTCCCCACACCCCCGCCGCCGCCGGCCGCCGCCGCCTATGCCCTTCCGCCCCACGCTCCCCCGCCGGTGCTCCCACGACCCCAAGCTCTCCTCCTTCCTCTCCGCCCTCGCCTCCCTCACCGCCTCCCCCTCTTCCTCCTCCTCCTCCCCTTTGCCGCCCGCCGGCTCGGTGCCCGCCTCCCCCACCCCCGCCGCCTACAACGCCCTCATGTCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTCCCTGCCCTTCGCCCCCACGGCGCCGCTCTTCACCACGCTCATCTCCTCCCTCGCCGCCTCAGGGCGGCCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCCCACCGCCTCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGACAGCGTGTTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTGGGTCATCTCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCACATGCTCGAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTACTGCGAGCAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGGTTGCCCACCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGAATTCAGCACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGCTGTTACATATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATTTCGTCAAGTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATATTCTCTTCGATTGTTTGTGCCGAAATGCAATGTTTTCAGAAGCAGTGTGCTTGCTGGAACATAGTGAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGCTTTGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGGGCATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGAAACTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTTTCAATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTCGTACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTGATAGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGGTAAATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAAAAATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATACTTCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACAATTTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGAGCGCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAATGGTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGGGAGGAATAGCTGAGTTTGAACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATCAAGTTTAAATGTGCTTTTAGATAAATAATGGACAGAGAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACAGAACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCATTCTTCTGGTCAATTCAATAGGGAAATGTTGAT]
consensusID : consensus_4860#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence
[TTCTTTTTAGAAAAACCGAATTCTGACTTTCTTTTGTTTATTAATGGTGACAGTCACCTAATGGTCTGAAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATTTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACCCAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTTTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACTTACAGAACTGCTTAGTTCTAAAAAAAAAAAAAA]
[-] EMBL CA761150 [TTCTTTTTAGAAAAACCGAATTCTGACTTTCTTTTGTTTATTAATGGTGACAGTCACCTAATGGTCTGAAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATTTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACCCAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTTTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACTTACAGAACTGCTTAGTTCTAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4860#0 CCTCATGTCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTC 60
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 ------------------------------------------------------------
consensus_4860#0 CCTGCCCTTCGCCCCCACGGCGCCGCTCTTTACCACGCTCATCTCCTCCCTCGCCGCCTC 120
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 ------------------------------------------------------------
consensus_4860#0 AGGGCGGCCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCC 180
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 ------------------AAACACCGGCGCTCCCCACACCCCCGCCGCCGCCGGCCGCCG 42
consensus_4860#0 CACCGCCTCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGA 240
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 CCGCCTATGCCCTTCCGCCCCACGCTCCCCCGCCGGTGCTCCCACGACCCCAAGCTCTCC 102
consensus_4860#0 CAGCGTGTTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTG 300
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 TCCTTCCTCTCCGCCCTCGCCTCCCTCACCGCCTCCCCCTCTTCCTCCTCCTCCTCCCCT 162
consensus_4860#0 GGTCATCTCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCA 360
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 TTGCCGCCCGCCGGCTCGGTGCCCGCCTCCCCCACCCCCGCCGCCTACAACGCCCTCATG 222
consensus_4860#0 CATGCTCGAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTA 420
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 TCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTCCCTGCCC 282
consensus_4860#0 CTGCGAGCAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGG 480
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 TTCGCCCCCACGGCGCCGCTCTTCACCACGCTCATCTCCTCCCTCGCCGCCTCAGGGCGG 342
consensus_4860#0 TTGCCCACCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGA 540
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 CCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCCCACCGCC 402
consensus_4860#0 ATTCAGCACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGC 600
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 TCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGACAGCGTG 462
consensus_4860#0 TGTTACATATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATT 660
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 TTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTGGGTCATC 522
consensus_4860#0 TCGTCAAGTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATAT 720
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 TCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCACATGCTC 582
consensus_4860#0 TCTCTTCGATTGTTTGTGCCGAAATGCAATGTTTTCA-GAAGCAGTGTGCTTGCTGGAAC 779
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 GAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTACTGCGAG 642
consensus_4860#0 ATAGTGAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGC 839
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 CAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGGTTGCCCA 702
consensus_4860#0 TTTGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGG 899
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 CCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGAATTCAGC 762
consensus_4860#0 GCATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGA 959
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 ACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGCTGTTACA 822
consensus_4860#0 AACTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTT 1019
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 TATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATTTCGTCAA 882
consensus_4860#0 TCAATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTC 1079
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 GTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATATTCTCTTC 942
consensus_4860#0 GTACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTG 1139
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 GATTGTTTGTGCCGAAATGCAATGTTTTCAGAAGCAGTGTGCTTGCTGGAACATAGT--- 999
consensus_4860#0 ATAGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGG 1199
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 ---GAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGCTT 1056
consensus_4860#0 TAAATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAA 1259
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 TGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGGGC 1116
consensus_4860#0 AAATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATA 1319
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 ATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGAAA 1176
consensus_4860#0 CTTCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACA 1379
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 CTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTTTC 1236
consensus_4860#0 ATTTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGA 1439
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 AATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTCGT 1296
consensus_4860#0 GCGCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAA 1499
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 ACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTGAT 1356
consensus_4860#0 TGGTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGTCAGTTGGTGCCAGAAA 1559
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 AGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGGTA 1416
consensus_4860#0 ATATATTATCTATAATATTAATGTCTTCACAAGATATTAATCTTTGTTAGGTTTTCAGGG 1619
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 AATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAAAA 1476
consensus_4860#0 GAGGAATAGCTGAGTTTGAACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATC 1679
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 ATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATACT 1536
consensus_4860#0 AAGTTTAAATGTGCTTTTAGATAAATAATGGACAGAGAGGTATGCTTTTTTTTGGGGGGG 1739
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 TCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACAAT 1596
consensus_4860#0 CTTGTTCTGTATTTACTCCCACAAGGGCAATCCCTATGCTGAAATCATTGTATTATACCA 1799
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 TTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGAGC 1656
consensus_4860#0 CCTCTGTTTTTTTGTGAAAGAAAATCATTGTTGTACTAGATATTTTTGGAGATGACATGT 1859
consensus_4860#2 ------------------------------------------------------------
consensus_4860#1 GCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAATG 1716
consensus_4860#0 CCTTTTGTTGTAATTTTGACTCTTCAATAGAAACTTCAATAAGCCCCAGGTTCTTTTTAG 1919
consensus_4860#2 --------------------------------------------------TTCTTTTTAG 10
consensus_4860#1 GTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGGGAGGAATAGCTGAGTTTG 1776
** *
consensus_4860#0 AAAAACCGAAT-CTGACTTTCTTTTGTTTATTAATGGTGAC--AATCACCTAATGGTCTG 1976
consensus_4860#2 AAAAACCGAATTCTGACTTTCTTTTGTTTATTAATGGTGAC--AGTCACCTAATGGTCTG 68
consensus_4860#1 AACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATCAAGTTTAAATGTGCTTTT 1836
** ** ** * *** ** *** * * * * ** * *
consensus_4860#0 AAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCT 2036
consensus_4860#2 AAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCT 128
consensus_4860#1 AGATAAATAATGGACAGAGAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCT 1896
* ** * *****************************************
consensus_4860#0 GGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATAT 2096
consensus_4860#2 GGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATAT 188
consensus_4860#1 GGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATAT 1956
************************************************************
consensus_4860#0 GAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAG 2156
consensus_4860#2 GAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAG 248
consensus_4860#1 GAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAG 2016
************************************************************
consensus_4860#0 ATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGT 2216
consensus_4860#2 ATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGT 308
consensus_4860#1 ATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGT 2076
************************************************************
consensus_4860#0 GAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGG 2276
consensus_4860#2 GAATTTATCATTTTAGCCGAGTAACAGGACCATTTTCGTTTTCATTTGGGGTGTGGAAGG 368
consensus_4860#1 GAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGG 2136
********************************* **************************
consensus_4860#0 CTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGAT 2336
consensus_4860#2 CTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGAT 428
consensus_4860#1 CTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGAT 2196
************************************************************
consensus_4860#0 AAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGT 2396
consensus_4860#2 AAATCACATGGGCTACCCAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGT 488
consensus_4860#1 AAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGT 2256
**************** *******************************************
consensus_4860#0 TAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTG 2456
consensus_4860#2 TAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTG 548
consensus_4860#1 TAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTG 2316
************************************************************
consensus_4860#0 TAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGT 2516
consensus_4860#2 TAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTTTGAGT 608
consensus_4860#1 TAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGT 2376
****************************************************** *****
consensus_4860#0 CGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACAC----AGA 2572
consensus_4860#2 CGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACTTACAGA 668
consensus_4860#1 CGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACAC----AGA 2432
***************************************************** ***
consensus_4860#0 ACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCAT------------------- 2613
consensus_4860#2 ACTGCTTAGTTCTA------AAAAAAAAAAAAA--------------------------- 695
consensus_4860#1 ACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCATTCTTCTGGTCAATTCAATA 2492
********** *** * *** *
consensus_4860#0 -------------
consensus_4860#2 -------------
consensus_4860#1 GGGAAATGTTGAT 2505
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||