cluster # 5460

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Oryza sativa
cluster # 5460 cluster # 5460 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5460#0 length = 1614 sequences # 3
consensusID : consensus_5460#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1614
fasta sequence
                              [CAGACACTGCACTACTGCAGCCCCCCGACCCCGATTGATCGCACGTATCGCCGGCGGCATTGGCCAAGAACTAGCAGCCGCGCAGCGGATGCAAAGCCTCTCCCGCTCCACCCTCCTCGGCCTCGTCCGCCGCCTTCGCTTGTCCTCCCCTCCATCCCCCGCGCCCCAACCGCGCCGCCTCCTCTTGACCGCCTCCCCGCCGCCGCCGCCGCCGCCGACGACGACTGTCTGTTGTTCTCGTCCGGCGGCCGCGCCAGGGCGAGATGCTCGGACGATGGCGGTGGCCCTGGCGGCTTCTCCCGATCGATCCATGGGCCGTGAATCCCGATTTCGTCATGGATGGAGGAGTCTGACCAGCAGCTCTGAGGAAAAAGGAGCGCTGAAAGATGTACCGGCCGCTGCCATGCTGAAGAATAGAAATGATAACGAGAAGAAACGGAGTAGGAGGAGGAAGCCTGGAATAACCATCCTTAAGAATAGCGGACACCGTGATGGTTCTATATTTAAGGGCAACCGTGGCTGGAAAATAGACTTCCGTATTGCAAACCCTGATGAGACCCAGTTCGAGGCCATGATGCTGTCAGATCCTGGAGATTGCAAGCCAGATGAAATAGCATGTGTTATGCACCAACCATGTCCCATGCTGCAAATTTTTTCATTGAAATTGGCTAAAACTTCCATTGATCGTTTTCCAGTTGAGTTGTATGGATACATAGCAGTGCGGGATCTCATGGATCCACTGCGCAATTATGTTGTCCGTCGCAGCAGGGATGATACCATTGCCGTGAAGCCGGGTTCTCTCATCGGAATGACTGGACCCAAGCGTGGCATAAAATTCTGTTCATCTGCCCTAATTGAGTATGATATGAGAATCAAGACAGGAGAACAAGAAGAGGATGATATACAGCTGATTGACGGTGTATTAGGCATCTTTGATGATCTAAGCAAGCCATCGTGTAAACCGTTCAGAAGTCGCATTGATGGAGTTGGTGGGGCAGTTGACATCACCGTTGGACTGCTTCCCAGTGCAGTGGAGGCCATATTTGAAGTTTCCATATCAGAAGTCCAAAGTTGTTTCGATCTCACCGTGTGTTCTTATGCTGGTGGGTTAAGCCAACAATTTAAGATCTTTCAGGGCACCATTGGTGAGTCGTGTGGCTTGAGAAGGTCCGTGGTTGCTGTAATGTTGGATGGTATGTTGCACCTGAGGTTCATAGCTCGGAGAAAAGGCTCTAAACGGGATCATGAAATTGCTTGTTCAATCAGAGCAAAGAAACATGGAAGCTCCACCCACCAGTTAAATACT-GAGCTCGCTTCCTTCTT-GGTCAAGGTGAATTGGTCGACATTGCCTATGTAAATTCCTTATCTTTTCTGTTATTCCTTAAA-TTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATTCCTTAAATTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATGCATCTCCATCAATGGTGGATGTTTGAAATGACCATTTTAATT-CCCATGAAGGAATTAAACAGACCAGCAAAATTTGCTCAGTAGTCACTAGATTGTAGTTCTGA-TTCATGGTTAAGAGCCTAAGAATATGCTGGCCTGAGCCC]

[+] EMBL AK100836             [CAGACACTGCACTACTGCAGCCCCCCGACCCCGATTGATCGCACGTATCGCCGGCGGCATTGGCCAAGAACTAGCAGCCGCGCAGCGGATGCAAAGCCTCTCCCGCTCCACCCTCCTCGGCCTCGTCCGCCGCCTTCGCTTGTCCTCCCCTCCATCCCCCGCGCCCCAACCGCGCCGCCTCCTCTTGACCGCCTCCCCGCCGCCGCCGCCGCCGCCGACGACGACTGTCTGTTGTTCTCGTCCGGCGGCCGCGCCAGGGCGAGATGCTCGGACGATGGCGGTGGCCCTGGCGGCTTCTCCCGATCGATCCATGGGCCGTGAATCCCGATTTCGTCATGGATGGAGGAGTCTGACCAGCAGCTCTGAGGAAAAAGGAGCGCTGAAAGATGTACCGGCCGCTGCCATGCTGAAGAATAGAAATGATAACGAGAAGAAACGGAGTAGGAGGAGGAAGCCTGGAATAACCATCCTTAAGAATAGCGGACACCGTGATGGTTCTATATTTAAGGGCAACCGTGGCTGGAAAATAGACTTCCGTATTGCAAACCCTGATGAGACCCAGTTCGAGGCCATGATGCTGTCAGATCCTGGAGATTGCAAGCCAGATGAAATAGCATGTGTTATGCACCAACCATGTCCCATGCTGCAAATTTTTTCATTGAAATTGGCTAAAACTTCCATTGATCGTTTTCCAGTTGAGTTGTATGGATACATAGCAGTGCGGGATCTCATGGATCCACTGCGCAATTATGTTGTCCGTCGCAGCAGGGATGATACCATTGCCGTGAAGCCGGGTTCTCTCATCGGAATGACTGGACCCAAGCGTGGCATAAAATTCTGTTCATCTGCCCTAATTGAGTATGATATGAGAATCAAGACAGGAGAACAAGAAGAGGATGATATACAGCTGATTGACGGTGTATTAGGCATCTTTGATGATCTAAGCAAGCCATCGTGTAAACCGTTCAGAAGTCGCATTGATGGAGTTGGTGGGGCAGTTGACATCACCGTTGGACTGCTTCCCAGTGCAGTGGAGGCCATATTTGAAGTTTCCATATCAGAAGTCCAAAGTTGTTTCGATCTCACCGTGTGTTCTTATGCTGGTGGGTTAAGCCAACAATTTAAGATCTTTCAGGGCACCATTGGTGAGTCGTGTGGCTTGAGAAGGTCCGTGGTTGCTGTAATGTTGGATGGTATGTTGCACCTGAGGTTCATAGCTCGGAGAAAAGGCTCTAAACGGGATCATGAAATTGCTTGTTCAATCAGAGCAAAGAAACATGGAAGCTCCACCCACCAGTTAAATACT GAGCTCGCTTCCTTCTT GGTCAAGGTGAATTGGTCGACATTGCCTATGTAAATTCCTTATCTTTTCTGTTATTCCTTAAATTTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATTCCTTAAATTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATGCATCTCCATCAATGGTGGATGTT                                                                                                                          ]
[-] EMBL OSS4463A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 gTAAATACTGGAGCTCGCNCCCTCCTTGGGTCAAGGTGAATTGGCCGACATTGCCTATGTAAATTCCTTATCTTTTCTGTTATTCCTTAAA TTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATTCCTTAAATTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATGCATCTCCATCAATGGTGGATGTTTGAAATGACCATTTTAATT CCCATGAAGGAATTAAACAGACCAGCAAAATTTGCTCAGTAGTCACTAGATTGTAGTTCTGA TTCATGGTTAAGAGCCTAAGAATATGCTGGCCTGAGCCC]
[-] EMBL OSS4894A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTTTTCTGTTATTCCTTAAA TTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATTCCTTAAATTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATGCATCTCCATCAATGGNGGATGTTTGAAATNACCATTTTAATTCCCCATGAAGGAATTAAACANACCNGCAAAATTTGCTCAGTAGTCACTAGATTGTAGTTCTGANCTCATGGTTAAGAGCCTAAGAATATGNTGGCCTGAGCCC]




>consensus_5460#0
CAGACACTGCACTACTGCAGCCCCCCGACCCCGATTGATCGCACGTATCGCCGGCGGCAT
TGGCCAAGAACTAGCAGCCGCGCAGCGGATGCAAAGCCTCTCCCGCTCCACCCTCCTCGG
CCTCGTCCGCCGCCTTCGCTTGTCCTCCCCTCCATCCCCCGCGCCCCAACCGCGCCGCCT
CCTCTTGACCGCCTCCCCGCCGCCGCCGCCGCCGCCGACGACGACTGTCTGTTGTTCTCG
TCCGGCGGCCGCGCCAGGGCGAGATGCTCGGACGATGGCGGTGGCCCTGGCGGCTTCTCC
CGATCGATCCATGGGCCGTGAATCCCGATTTCGTCATGGATGGAGGAGTCTGACCAGCAG
CTCTGAGGAAAAAGGAGCGCTGAAAGATGTACCGGCCGCTGCCATGCTGAAGAATAGAAA
TGATAACGAGAAGAAACGGAGTAGGAGGAGGAAGCCTGGAATAACCATCCTTAAGAATAG
CGGACACCGTGATGGTTCTATATTTAAGGGCAACCGTGGCTGGAAAATAGACTTCCGTAT
TGCAAACCCTGATGAGACCCAGTTCGAGGCCATGATGCTGTCAGATCCTGGAGATTGCAA
GCCAGATGAAATAGCATGTGTTATGCACCAACCATGTCCCATGCTGCAAATTTTTTCATT
GAAATTGGCTAAAACTTCCATTGATCGTTTTCCAGTTGAGTTGTATGGATACATAGCAGT
GCGGGATCTCATGGATCCACTGCGCAATTATGTTGTCCGTCGCAGCAGGGATGATACCAT
TGCCGTGAAGCCGGGTTCTCTCATCGGAATGACTGGACCCAAGCGTGGCATAAAATTCTG
TTCATCTGCCCTAATTGAGTATGATATGAGAATCAAGACAGGAGAACAAGAAGAGGATGA
TATACAGCTGATTGACGGTGTATTAGGCATCTTTGATGATCTAAGCAAGCCATCGTGTAA
ACCGTTCAGAAGTCGCATTGATGGAGTTGGTGGGGCAGTTGACATCACCGTTGGACTGCT
TCCCAGTGCAGTGGAGGCCATATTTGAAGTTTCCATATCAGAAGTCCAAAGTTGTTTCGA
TCTCACCGTGTGTTCTTATGCTGGTGGGTTAAGCCAACAATTTAAGATCTTTCAGGGCAC
CATTGGTGAGTCGTGTGGCTTGAGAAGGTCCGTGGTTGCTGTAATGTTGGATGGTATGTT
GCACCTGAGGTTCATAGCTCGGAGAAAAGGCTCTAAACGGGATCATGAAATTGCTTGTTC
AATCAGAGCAAAGAAACATGGAAGCTCCACCCACCAGTTAAATACTGAGCTCGCTTCCTT
CTTGGTCAAGGTGAATTGGTCGACATTGCCTATGTAAATTCCTTATCTTTTCTGTTATTC
CTTAAATTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATTCCTTAAATTTTTGTT
AGAAGAGATAACCTGCTTCATCCCGTTAATGCATCTCCATCAATGGTGGATGTTTGAAAT
GACCATTTTAATTCCCATGAAGGAATTAAACAGACCAGCAAAATTTGCTCAGTAGTCACT
AGATTGTAGTTCTGATTCATGGTTAAGAGCCTAAGAATATGCTGGCCTGAGCCC
clustalw multiple alignements is not computed in this case