|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5505#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3602 fasta sequence
[CGTAAAGGCGGCGCCTTTTCTCTGCAGTTCCTCCCCTCCCGTCCCTTTCCGCTCCCGCGCCCGAGAATTTATTGCTCGCAATGCTGCCCTCTCTGATGATGAGCAGAGCAAAGGATGCAGAGCCTTTACACTTTAAATGCTTGGTCGGTTTGGCTGCAAGATGCCATATTGCCATCTCATGCGTACCACCGCCATCCGTCCGTCACTGAGCTCCTGCTTGCGTAGTGACGAGCGTTCTGGTTTCGCTCAGCTCGTCTCGATTTCACACGGATTGGAATTCGGCCGCATTCCGCGTGGAAAGCTTCGAGTTCTTGGTGCTTCTTGTTCTCCGCTGCGAAAACCGCAGCTTTAGATTCATCAATGTTGTTATCCTCTGAGGCTTCCTTTGTAATAAGAAGGCAGTGATCAATTTGTTTGACCTGAGTACCGGGATGACCAGCAAAAATGTGCTAACTGATAGAACTCACAGAGATGGCTCTCGAGTTCATAAAAGCCGGCAAGATGTCAATAGAACTGTTGATCCCAAAATAGGTTGTGTAGAGGACAAATTACAGGTAGTAGCTAGTACTAGGAATTCTTCAAGCAACAAATCAACCATATCTCCAATGAACAGATTAGTAGCAATGGAGATGTCCAAAGGAGTGGAATCAAAGAGGAAGCCACCTAGTGTCGTTGCCAGACTAATGGGGCTTGATGATGATCTACCTGCTAAAGAACCAGCATTACAATCTTCTAGAAGAAATTTGCGGAGAAGTCATTCACTTGATAATTTGGCAGCAACAAACAGGCCCCAACAACAGCAAGAGCAGCATTACAGCAGGACAACACCAAACATACACATAGGCCCCAAAGAGACAGTTGAATTTAAGGATGTGTACGAAGTCTCTGAAGATCCATTAAAGAGACATCATATTCTGGGGCAAAATTTTCCTTGGGAAAGATCTTCTGGGAACAAGAGTGACACTAGGATCGAAGCTGTTCGACAGAAGTTCATGGAAGCAAAACGCCTTGCCACAAATGAGAATCTCATCCATTCAAAGCAGTTTCAAGAAGCTCTTGAGGTTCTAAGTTCAAACAGGGAGTTGTTTCTGAAGTTTCTTGAAGAACCAAGCCCTGCTTTCTTGAAGCAGCTCGATGGACTTGACACAACGCCTGCACCGCCTCCGACGAAGCGTATTACAGTGTTGAAGCCAATCAAATCTGTTGAGAACAATGGAATAAGAGAAACCAGAACACACCAAGTTATTAATGAAGAAAATGAACTTGTGATGGGAAAGACTCACCAGAGATCTTACTCAGCAGATGACAACTTCTCCAAGTCAACTAGGATAGTGGTCCTAAAGCCTAGCCCTGGGAAGCCTAATAGAACAGGAGCCAGGCTAACTGCCCGAGCAGCTCCATCTGAACAAACTCGGCGGATCGACTTCCATGGAGGTTTACAAGATGATGCATCCATCCTAGGATCTAGGGAATTACTGCATGGTTCGGTTCAGCACATGCCAGAGAGTCGTCATCGGCGGGACGAATCCCTGATATCATCCACATATTCAAATGGGTATGGTGGAGATGAAAGCTCTTTCAGTGGGTCAGAAGTTGACTACATTGATGAAGGAGGTAGCCCAAGTGACTCAGATGCAGTCAGTCCAATGTCGCGACATTCATGGGATTACATCAGAAGACACAACAGTCCTCACTCAGCCTCTACTTTTAGCAGGGCCCATTCACATTCACCTGAGTCATCTGTGATCAGGGAAGCCAAAAAACGGCTTTCAGAGAGATGGGCAATGGTATCATACAATGAGATCAATCAAGAACAAGTACCTTTGCGAAGGAGCTCAACCACCTTGGGTGAGATGCTCTCCCTTCAAGTAGCTAAGAAAGAAGAAGCTGTTGCTGGGATAATTTCTGTTTCAAGCAACCGGTCAAGTGGCACAGAAAATGAGTTGGCCATGAAAGATGCATGCAAATCTACTTTAAGAGAGTACGATGAAAATGGGAAGAGCTCTCCAAGGAATTTAGCAAAATCAAAATCTGTCCCAGTGTCTTCATCTATATTTGACAACGTAGCAGTGAATGCTCAATCTGCAAATTCTGAAGGGACTCCGAAGGTGTTTACAAAGTCAGGTAGAGCAAAATTATCTTTCACGGGGAAAATATCAAGTTTTTTCTTCCCAGGCAATAAAAGGCCAACAAAAGAGAAAACTTCCCTCTCATCTGATAGCTCAGGCGAGATATTTGGATGTATCGGGCACATGGTGCCGCAGTCTGATCACAATCTTGGTCCTGATGAACAAATGGCTTTTTGCAAGGATGAAGCTGATAATTCCACCAATCATGCTCCCTGTTCTACAAAAGATGCTGGTTCCATAGAAGTACCTGTATCTTCTGACTGTGTAAGTGGAGATGTTGATGAAGTAAAATCAAATGGTGATCTAAAATCTATCCACGATGAGACTAGTCCTACTTCAATTCTTGACACGGTTTTTGAAGATAGCAACAGTAATGAACCTGAATCTTCAAGAAGAACTTCCTGCACCGAGAGGGTTGCCTTACGATGCCCTGCTATCGATTCTGTTGCCCGCTCATTTTCATGGGAAGATACCAACTCAGGTTCTCCGTTGCTAGGTGGCCTAAAGCATTCCAATGTAGATGATGCCGATTATGATGATGGTGAACTAAAATGTTACTCTCTTGTACAAGAGATAGTATCATCTGCTGGATTATGCCATCTGCAGTTAAGTATGGTCTTCACAGGGTGGTACCTGCCTGAATCCCCCCTTGATCCTGCATTGTGTGACAAGTTCTTGGATCGCAAGGAGGAGGATGCTAAATCGAGGGAGCGAAGGTCACACCAAAAGCTCATTTTCGATTGTGTAAATATGGCCTTGGTTGAGATTGGCCAGGATACGTTACTATGCAGCTATCCATGGAGTAGAGCATGCTTAAGAACATGGAGGGAGAAACTATCTGAAACCTTGGGTGAAGAAGTATGGAACATCGTGAGCGATTGGCTTTATGGAGATGGGAGCTTTGCGGCAAACAAGGACGACAATGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAAGGGTTGGATTAAGCTATTGACAATGGAAACAGATGAGATCACTGAGCAGATTGCCAGTGAAGTGTTGGAGGACATTGTCACAGATTCTGTGGAGCATCTGTCAATTTGTTGTTCAGAGCATGGCATTTCTATGCCAGTAGCAAATCTGTAGGAAGCAATTTCTTTCATATGAGCACTTGCCTTGAATTTTGTTGTGCTGAAAGAATTCCTCAGCAGCTTCATAGATTGTATATAAGTCCATGTAGTTGCTTACTCTTGCTTCTGCTTATACCTACAGCTCAGATTGGCCAAAATCGTGCAGTTCTTTACTCTGTAGATGTCCTACTGGTCAAATTGGGTTAGTCAGAAGTCTAACAATAGCATATGGTGTCAGTAGTATTGTAGCTTTTTGGGAAGCGAAATACTAACTTTTAGTGGCCGTGTGTGTTTGACTTTGAGGTGCAGCAGAACACTGCTCCATATGACCATATGCTGCAAAGAGTATTATATAATGCATTCCGGC]
[+] EMBL AK070863 [CGTAAAGGCGGCGCCTTTTCTCTGCAGTTCCTCCCCTCCCGTCCCTTTCCGCTCCCGCGCCCGAGAATTTATTGCTCGCAATGCTGCCCTCTCTGATGATGAGCAGAGCAAAGGATGCAGAGCCTTTACACTTTAAATGCTTGGTCGGTTTGGCTGCAAGATGCCATATTGCCATCTCATGCGTACCACCGCCATCCGTCCGTCACTGAGCTCCTGCTTGCGTAGTGACGAGCGTTCTGGTTTCGCTCAGCTCGTCTCGATTTCACACGGATTGGAATTCGGCCGCATTCCGCGTGGAAAGCTTCGAGTTCTTGGTGCTTCTTGTTCTCCGCTGCGAAAACCGCAGCTTTAGATTCATCAATGTTGTTATCCTCTGAGGCTTCCTTTGTAATAAGAAGGCAGTGATCAATTTGTTTGACCTGAGTACCGGGATGACCAGCAAAAATGTGCTAACTGATAGAACTCACAGAGATGGCTCTCGAGTTCATAAAAGCCGGCAAGATGTCAATAGAACTGTTGATCCCAAAATAGGTTGTGTAGAGGACAAATTACAGGTAGTAGCTAGTACTAGGAATTCTTCAAGCAACAAATCAACCATATCTCCAATGAACAGATTAGTAGCAATGGAGATGTCCAAAGGAGTGGAATCAAAGAGGAAGCCACCTAGTGTCGTTGCCAGACTAATGGGGCTTGATGATGATCTACCTGCTAAAGAACCAGCATTACAATCTTCTAGAAGAAATTTGCGGAGAAGTCATTCACTTGATAATTTGGCAGCAACAAACAGGCCCCAACAACAGCAAGAGCAGCATTACAGCAGGACAACACCAAACATACACATAGGCCCCAAAGAGACAGTTGAATTTAAGGATGTGTACGAAGTCTCTGAAGATCCATTAAAGAGACATCATATTCTGGGGCAAAATTTTCCTTGGGAAAGATCTTCTGGGAACAAGAGTGACACTAGGATCGAAGCTGTTCGACAGAAGTTCATGGAAGCAAAACGCCTTGCCACAAATGAGAATCTCATCCATTCAAAGCAGTTTCAAGAAGCTCTTGAGGTTCTAAGTTCAAACAGGGAGTTGTTTCTGAAGTTTCTTGAAGAACCAAGCCCTGCTTTCTTGAAGCAGCTCGATGGACTTGACACAACGCCTGCACCGCCTCCGACGAAGCGTATTACAGTGTTGAAGCCAATCAAATCTGTTGAGAACAATGGAATAAGAGAAACCAGAACACACCAAGTTATTAATGAAGAAAATGAACTTGTGATGGGAAAGACTCACCAGAGATCTTACTCAGCAGATGACAACTTCTCCAAGTCAACTAGGATAGTGGTCCTAAAGCCTAGCCCTGGGAAGCCTAATAGAACAGGAGCCAGGCTAACTGCCCGAGCAGCTCCATCTGAACAAACTCGGCGGATCGACTTCCATGGAGGTTTACAAGATGATGCATCCATCCTAGGATCTAGGGAATTACTGCATGGTTCGGTTCAGCACATGCCAGAGAGTCGTCATCGGCGGGACGAATCCCTGATATCATCCACATATTCAAATGGGTATGGTGGAGATGAAAGCTCTTTCAGTGGGTCAGAAGTTGACTACATTGATGAAGGAGGTAGCCCAAGTGACTCAGATGCAGTCAGTCCAATGTCGCGACATTCATGGGATTACATCAGAAGACACAACAGTCCTCACTCAGCCTCTACTTTTAGCAGGGCCCATTCACATTCACCTGAGTCATCTGTGATCAGGGAAGCCAAAAAACGGCTTTCAGAGAGATGGGCAATGGTATCATACAATGAGATCAATCAAGAACAAGTACCTTTGCGAAGGAGCTCAACCACCTTGGGTGAGATGCTCTCCCTTCAAGTAGCTAAGAAAGAAGAAGCTGTTGCTGGGATAATTTCTGTTTCAAGCAACCGGTCAAGTGGCACAGAAAATGAGTTGGCCATGAAAGATGCATGCAAATCTACTTTAAGAGAGTACGATGAAAATGGGAAGAGCTCTCCAAGGAATTTAGCAAAATCAAAATCTGTCCCAGTGTCTTCATCTATATTTGACAACGTAGCAGTGAATGCTCAATCTGCAAATTCTGAAGGGACTCCGAAGGTGTTTACAAAGTCAGGTAGAGCAAAATTATCTTTCACGGGGAAAATATCAAGTTTTTTCTTCCCAGGCAATAAAAGGCCAACAAAAGAGAAAACTTCCCTCTCATCTGATAGCTCAGGCGAGATATTTGGATGTATCGGGCACATGGTGCCGCAGTCTGATCACAATCTTGGTCCTGATGAACAAATGGCTTTTTGCAAGGATGAAGCTGATAATTCCACCAATCATGCTCCCTGTTCTACAAAAGATGCTGGTTCCATAGAAGTACCTGTATCTTCTGACTGTGTAAGTGGAGATGTTGATGAAGTAAAATCAAATGGTGATCTAAAATCTATCCACGATGAGACTAGTCCTACTTCAATTCTTGACACGGTTTTTGAAGATAGCAACAGTAATGAACCTGAATCTTCAAGAAGAACTTCCTGCACCGAGAGGGTTGCCTTACGATGCCCTGCTATCGATTCTGTTGCCCGCTCATTTTCATGGGAAGATACCAACTCAGGTTCTCCGTTGCTAGGTGGCCTAAAGCATTCCAATGTAGATGATGCCGATTATGATGATGGTGAACTAAAATGTTACTCTCTTGTACAAGAGATAGTATCATCTGCTGGATTATGCCATCTGCAGTTAAGTATGGTCTTCACAGGGTGGTACCTGCCTGAATCCCCCCTTGATCCTGCATTGTGTGACAAGTTCTTGGATCGCAAGGAGGAGGATGCTAAATCGAGGGAGCGAAGGTCACACCAAAAGCTCATTTTCGATTGTGTAAATATGGCCTTGGTTGAGATTGGCCAGGATACGTTACTATGCAGCTATCCATGGAGTAGAGCATGCTTAAGAACATGGAGGGAGAAACTATCTGAAACCTTGGGTGAAGAAGTATGGAACATCGTGAGCGATTGGCTTTATGGAGATGGGAGCTTTGCGGCAAACAAGGACGACAATGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAAGGGTTGGATTAAGCTATTGACAATGGAAACAGATGAGATCACTGAGCAGATTGCCAGTGAAGTGTTGGAGGACATTGTCACAGATTCTGTGGAGCATCTGTCAATTTGTTGTTCAGAGCATGGCATTTCTATGCCAGTAGCAAATCTGTAGGAAGCAATTTCTTTCATATGAGCACTTGCCTTGAATTTTGTTGTGCTGAAAGAATTCCTCAGCAGCTTCATAGATTGTATATAAGTCCATGTAGTTGCTTACTCTTGCTTCTGCTTATACCTACAGCTCAGATTGGCCAAAATCGTGCAGTTCTTTACTCTGTAGATGTCCTACTGGTCAAATTGGGTTAGTCAGAAGTCTAACAATAGCATATGGTGTCAGTAGTATTGTAGCTTTTTGGGAAGCGAAATACTAACTTTTAGTGGCCGTGTGTGTTTGACTTTGAGGTGCAGCAGAACACTGCTCCATATGACCATATGCTGCAAAGAGTATTATATAATGCATTCCGGC]
consensusID : consensus_5505#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3483 fasta sequence
[ATCATCCCACCAACACCAACCAAACCAACCAACCAACCTCCCCACACCGCCGCCGTCGCGTAGCGCCCGCCCACCCCCGCGCTCGCCGCCGGCGGGCGAACGCTCGCCATCCGCCCGCATCGCCATAGGATTCATCAATGTTGTTATCCTCTGAGGCTTCCTTTGTAATAAGAAGGCAGTGATCAATTTGTTTGACCTGAGTACCGGGATGACCAGCAAAAATGTGCTAACTGATAGAACTCACAGAGATGCTTGCATCTTTCAGGCTCTCGAGTTCATAAAAGCCGGCAAGATGTCAATAGAACTGTTGATCCCAAAATAGGTTGTGTAGAGGACAAATTACAGGTAGTAGCTAGTACTAGGAATTCTTCAAGCAACAAATCAACCATATCTCCAATGAACAGATTAGTAGCAATGGAGATGTCCAAAGGAGTGGAATCAAAGAGGAAGCCACCTAGTGTCGTTGCCAGACTAATGGGGCTTGATGATGATCTACCTGCTAAAGAACCAGCATTACAATCTTCTAGAAGAAATTTGCGGAGAAGTCATTCACTTGATAATTTGGCAGCAACAAACAGGCCCCAACAACAGCAAGAGCAGCATTACAGCAGGACAACACCAAACATACACATAGGCCCCAAAGAGACAGTTGAATTTAAGGATGTGTACGAAGTCTCTGAAGATCCATTAAAGAGACATCATATTCTGGGGCAAAATTTTCCTTGGGAAAGATCTTCTGGGAACAAGAGTGACACTAGGATCGAAGCTGTTCGACAGAAGTTCATGGAAGCAAAACGCCTTGCCACAAATGAGAATCTCATCCATTCAAAGCAGTTTCAAGAAGCTCTTGAGGTTCTAAGTTCAAACAGGGAGTTGTTTCTGAAGTTTCTTGAAGAACCAAGCCCTGCTTTCTTGAAGCAGCTCGATGGACTTGACACAACGCCTGCACCGCCTCCGACGAAGCGTATTACAGTGTTGAAGCCAATCAAATCTGTTGAGAACAATGGAATAAGAGAAACCAGAACACACCAAGTTATTAATGAAGAAAATGAACTTGTGATGGGAAAGACTCACCAGAGATCTTACTCAGCAGATGACAACTTCTCCAAGTCAACTAGGATAGTGGTCCTAAAGCCTAGCCCTGGGAAGCCTAATAGAACAGGAGCCAGGCTAACTGCCCGAGCAGCTCCATCTGAACAAACTCGGCGGATCGACTTCCATGGAGGTTTACAAGATGATGCATCCATCCTAGGATCTAGGGAATTACTGCATGGTTCGGTTCAGCACATGCCAGAGAGTCGTCATCGGCGGGACGAATCCCTGATATCATCCACATATTCAAATGGGTATGGTGGAGATGAAAGCTCTTTCAGTGGGTCAGAAGTTGACTACATTGATGAAGGAGGTAGCCCAAGTGACTCAGATGCAGTCAGTCCAATGTCGCGACATTCATGGGATTACATCAGAAGACACAACAGTCCTCACTCAGCCTCTACTTTTAGCAGGGCCCATTCACATTCACCTGAGTCATCTGTGATCAGGGAAGCCAAAAAACGGCTTTCAGAGAGATGGGCAATGGTATCATACAATGAGATCAATCAAGAACAAGTACCTTTGCGAAGGAGCTCAACCACCTTGGGTGAGATGCTCTCCCTTCAAGTAGCTAAGAAAGAAGAAGCTGTTGCTGGGATAATTTCTGTTTCAAGCAACCGGTCAAGTGGCACAGAAAATGAGTTGGCCATGAAAGATGCATGCAAATCTACTTTAAGAGAGTACGATGAAAATGGGAAGAGCTCTCCAAGGAATTTAGCAAAATCAAAATCTGTCCCAGTGTCTTCATCTATATTTGACAACGTAGCAGTGAATGCTCAATCTGCAAATTCTGAAGGGACTCCGAAGGTGTTTACAAAGTCAGGTAGAGCAAAATTATCTTTCACGGGGAAAATATCAAGTTTTTTCTTCCCAGGCAATAAAAGGCCAACAAAAGAGAAAACTTCCCTCTCATCTGATAGCTCAGGCGAGATATTTGGATGTATCGGGCACATGGTGCCGCAGTCTGATCACAATCTTGGTCCTGATGAACAAATGGCTTTTTGCAAGGATGAAGCTGATAATTCCACCAATCATGCTCCCTGTTCTACAAAAGATGCTGGTTCCATAGAAGTACCTGTATCTTCTGACTGTGTAAGTGGAGATGTTGATGAAGTAAAATCAAATGGTGATCTAAAATCTATCCACGATGAGACTAGTCCTACTTCAATTCTTGACACGGTTTTTGAAGATAGCAACAGTAATGAAACTGAATCTTCAAGAAGAACTTCCTGCACCGAGAGGGTTGCCTTACGATGCCCTGCTATCGATTCTGTTGCCCGCTCATTTTCATGGGAAGATACCAACTCAGGTTCTCCGTTGCTAGGTGGCCTAAAGCATTCCAATGTAGATGATGCCGATTATGATGATGATGAACTAAAATGTTACTCTCTTGTACAAGAGATAGTATCATCTGCTGGATTATGCCATCTGCAGTTAAGTATGGTCTTCACAGGGTGGTACCTGCCTGAATCCCCCCTTGATCCTGCATTGTGTGACAAGTTCTTGGATCGCAAGGAGGAGGATGCTAAATCGAGGGAGCGAAGGTCACACCAAAAGCTCATTTTCGATTGTGTAAATATGGCCTTGGTTGAGATTGGCCAGGATACGTTACTATGCAGCTATCCATGGAGTAGAGCATGCTTAAGAACATGGAGGGAGAAACTATCTGAAACCTTGGGTGAAGAAGTATGGAACATCGTGAGCGATTGGCTTTATGGAGATGGGAGCTTTGCGGTAAACAAGGACGACAATGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAAGGGTTGGATTAAGCTATTGACAATGGAAACAGATGAGATCACTGAGCAGATTGCCAGTGAAGTGTTGGAGGACATTGTCACAGATTCTGTGGAGCATCTGTCAATTTGTTGTTCAGAGCATGGCATTTCAATGCCAGTAGCAAATCTGTAGGAAGCAATTTCTTTCATATGAGCACTTGCCTTGAATTTTGTTGTGCTGAAAGAATTCCTCAGCAGCTTCATAGATTGTATATAAGTCCATGTAGTTGCTTACTCTTGCTTCTGCTTATACCTACAGCTCAGATTGGCCAAAATCGTGCAGTTCTTTACTCTGTAGATGTCCTACTGGTCAAATTGGGTTAGTCAGAAGTCTAACAATAGCATATGGTGTCAGTAGTATTGTAGCTTTTTGGGAAGCGAAATACTAACTTTTAGTGGCCGTGTGTGTTTGACTTTGAGGTGCAGCAGAACACTGCTCCATATGACCATATGCTGCAAAGAGTATTATATAATGCATTCCGGCGCCAGTTGGCAGCATCCTGGTGTCTTGAGCTCTATGTCAAATTCGTCAATCTGAACGTCTGAATATAAAATTGAAACGAGGGCATCTTAA]
[+] EMBL AK102222 [ATCATCCCACCAACACCAACCAAACCAACCAACCAACCTCCCCACACCGCCGCCGTCGCGTAGCGCCCGCCCACCCCCGCGCTCGCCGCCGGCGGGCGAACGCTCGCCATCCGCCCGCATCGCCATAGGATTCATCAATGTTGTTATCCTCTGAGGCTTCCTTTGTAATAAGAAGGCAGTGATCAATTTGTTTGACCTGAGTACCGGGATGACCAGCAAAAATGTGCTAACTGATAGAACTCACAGAGATGCTTGCATCTTTCAGGCTCTCGAGTTCATAAAAGCCGGCAAGATGTCAATAGAACTGTTGATCCCAAAATAGGTTGTGTAGAGGACAAATTACAGGTAGTAGCTAGTACTAGGAATTCTTCAAGCAACAAATCAACCATATCTCCAATGAACAGATTAGTAGCAATGGAGATGTCCAAAGGAGTGGAATCAAAGAGGAAGCCACCTAGTGTCGTTGCCAGACTAATGGGGCTTGATGATGATCTACCTGCTAAAGAACCAGCATTACAATCTTCTAGAAGAAATTTGCGGAGAAGTCATTCACTTGATAATTTGGCAGCAACAAACAGGCCCCAACAACAGCAAGAGCAGCATTACAGCAGGACAACACCAAACATACACATAGGCCCCAAAGAGACAGTTGAATTTAAGGATGTGTACGAAGTCTCTGAAGATCCATTAAAGAGACATCATATTCTGGGGCAAAATTTTCCTTGGGAAAGATCTTCTGGGAACAAGAGTGACACTAGGATCGAAGCTGTTCGACAGAAGTTCATGGAAGCAAAACGCCTTGCCACAAATGAGAATCTCATCCATTCAAAGCAGTTTCAAGAAGCTCTTGAGGTTCTAAGTTCAAACAGGGAGTTGTTTCTGAAGTTTCTTGAAGAACCAAGCCCTGCTTTCTTGAAGCAGCTCGATGGACTTGACACAACGCCTGCACCGCCTCCGACGAAGCGTATTACAGTGTTGAAGCCAATCAAATCTGTTGAGAACAATGGAATAAGAGAAACCAGAACACACCAAGTTATTAATGAAGAAAATGAACTTGTGATGGGAAAGACTCACCAGAGATCTTACTCAGCAGATGACAACTTCTCCAAGTCAACTAGGATAGTGGTCCTAAAGCCTAGCCCTGGGAAGCCTAATAGAACAGGAGCCAGGCTAACTGCCCGAGCAGCTCCATCTGAACAAACTCGGCGGATCGACTTCCATGGAGGTTTACAAGATGATGCATCCATCCTAGGATCTAGGGAATTACTGCATGGTTCGGTTCAGCACATGCCAGAGAGTCGTCATCGGCGGGACGAATCCCTGATATCATCCACATATTCAAATGGGTATGGTGGAGATGAAAGCTCTTTCAGTGGGTCAGAAGTTGACTACATTGATGAAGGAGGTAGCCCAAGTGACTCAGATGCAGTCAGTCCAATGTCGCGACATTCATGGGATTACATCAGAAGACACAACAGTCCTCACTCAGCCTCTACTTTTAGCAGGGCCCATTCACATTCACCTGAGTCATCTGTGATCAGGGAAGCCAAAAAACGGCTTTCAGAGAGATGGGCAATGGTATCATACAATGAGATCAATCAAGAACAAGTACCTTTGCGAAGGAGCTCAACCACCTTGGGTGAGATGCTCTCCCTTCAAGTAGCTAAGAAAGAAGAAGCTGTTGCTGGGATAATTTCTGTTTCAAGCAACCGGTCAAGTGGCACAGAAAATGAGTTGGCCATGAAAGATGCATGCAAATCTACTTTAAGAGAGTACGATGAAAATGGGAAGAGCTCTCCAAGGAATTTAGCAAAATCAAAATCTGTCCCAGTGTCTTCATCTATATTTGACAACGTAGCAGTGAATGCTCAATCTGCAAATTCTGAAGGGACTCCGAAGGTGTTTACAAAGTCAGGTAGAGCAAAATTATCTTTCACGGGGAAAATATCAAGTTTTTTCTTCCCAGGCAATAAAAGGCCAACAAAAGAGAAAACTTCCCTCTCATCTGATAGCTCAGGCGAGATATTTGGATGTATCGGGCACATGGTGCCGCAGTCTGATCACAATCTTGGTCCTGATGAACAAATGGCTTTTTGCAAGGATGAAGCTGATAATTCCACCAATCATGCTCCCTGTTCTACAAAAGATGCTGGTTCCATAGAAGTACCTGTATCTTCTGACTGTGTAAGTGGAGATGTTGATGAAGTAAAATCAAATGGTGATCTAAAATCTATCCACGATGAGACTAGTCCTACTTCAATTCTTGACACGGTTTTTGAAGATAGCAACAGTAATGAAACTGAATCTTCAAGAAGAACTTCCTGCACCGAGAGGGTTGCCTTACGATGCCCTGCTATCGATTCTGTTGCCCGCTCATTTTCATGGGAAGATACCAACTCAGGTTCTCCGTTGCTAGGTGGCCTAAAGCATTCCAATGTAGATGATGCCGATTATGATGATGATGAACTAAAATGTTACTCTCTTGTACAAGAGATAGTATCATCTGCTGGATTATGCCATCTGCAGTTAAGTATGGTCTTCACAGGGTGGTACCTGCCTGAATCCCCCCTTGATCCTGCATTGTGTGACAAGTTCTTGGATCGCAAGGAGGAGGATGCTAAATCGAGGGAGCGAAGGTCACACCAAAAGCTCATTTTCGATTGTGTAAATATGGCCTTGGTTGAGATTGGCCAGGATACGTTACTATGCAGCTATCCATGGAGTAGAGCATGCTTAAGAACATGGAGGGAGAAACTATCTGAAACCTTGGGTGAAGAAGTATGGAACATCGTGAGCGATTGGCTTTATGGAGATGGGAGCTTTGCGGTAAACAAGGACGACAATGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAAGGGTTGGATTAAGCTATTGACAATGGAAACAGATGAGATCACTGAGCAGATTGCCAGTGAAGTGTTGGAGGACATTGTCACAGATTCTGTGGAGCATCTGTCAATTTGTTGTTCAGAGCATGGCATTTCAATGCCAGTAGCAAATCTGTAGGAAGCAATTTCTTTCATATGAGCACTTGCCTTGAATTTTGTTGTGCTGAAAGAATTCCTCAGCAGCTTCATAGATTGTATATAAGTCCATGTAGTTGCTTACTCTTGCTTCTGCTTATACCTACAGCTCAGATTGGCCAAAATCGTGCAGTTCTTTACTCTGTAGATGTCCTACTGGTCAAATTGGGTTAGTCAGAAGTCTAACAATAGCATATGGTGTCAGTAGTATTGTAGCTTTTTGGGAAGCGAAATACTAACTTTTAGTGGCCGTGTGTGTTTGACTTTGAGGTGCAGCAGAACACTGCTCCATATGACCATATGCTGCAAAGAGTATTATATAATGCATTCCGGCGCCAGTTGGCAGCATCCTGGTGTCTTGAGCTCTATGTCAAATTCGTCAATCTGAACGTCTGAATATAAAATTGAAACGAGGGCATCTTAA]
consensusID : consensus_5505#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 530 fasta sequence
[TTTTCGGATTTGTGGTAATATGGCCTTGGTTGAGATTGCCAGATACGTTNCTATCCACTATCCATGGAGTAGACATGCTTAAGAACATGGAGGGAGAAACTTATCTGAAACCTTGGTTGAAGAAGTATGGAACATCTGTGAGCGATTGGCTTTATGGAGATGGGAGTCTTTGCGGCAAACAAGGNCGACACATGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAAGGGTTGGATTAAGCTATTGACAATGGACACAAGATGAGATCACTGAGCAGATTCCCAGTGAATGTTGGAGGACAATTGTCACAGATTCTGTGGAGCATCTGTCAATGTTGTTGTTCAGAGCATGGCATGTGTCAATCCCCAGTACAAAATCTGTAGGAACACATTGTCTGTTGCATGATGACANCTTCCCTNGAATTTTGTTGTCTGAAAGAATTCCTCACAGCTTCATAGATTGTATATAAGTCCATGTAGTTGCTTACTCTTGCTTCTGCTTATACCTAAAAAAAAAA]
[+] EMBL BI807053 [TTTTCGGATTTGTGGTAATATGGCCTTGGTTGAGATTGCCAGATACGTTNCTATCCACTATCCATGGAGTAGACATGCTTAAGAACATGGAGGGAGAAACTTATCTGAAACCTTGGTTGAAGAAGTATGGAACATCTGTGAGCGATTGGCTTTATGGAGATGGGAGTCTTTGCGGCAAACAAGGNCGACACATGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAAGGGTTGGATTAAGCTATTGACAATGGACACAAGATGAGATCACTGAGCAGATTCCCAGTGAATGTTGGAGGACAATTGTCACAGATTCTGTGGAGCATCTGTCAATGTTGTTGTTCAGAGCATGGCATGTGTCAATCCCCAGTACAAAATCTGTAGGAACACATTGTCTGTTGCATGATGACANCTTCCCTNGAATTTTGTTGTCTGAAAGAATTCCTCACAGCTTCATAGATTGTATATAAGTCCATGTAGTTGCTTACTCTTGCTTCTGCTTATACCTAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5505#0 CGTAAAGGCGGCGCCTTTTCTCTGCAGTTCCTCCCCTCCCGTCCCTTTCCGCTCCCGCGC 60
consensus_5505#1 ------------------------------------------------------------
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CCGAGAATTTATTGCTCGCAATGCTGCCCTCTCTGATGATGAGCAGAGCAAAGGATGCAG 120
consensus_5505#1 ------------------------------------------------------------
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 AGCCTTTACACTTTAAATGCTTGGTCGGTTTGGCTGCAAGATGCCATATTGCCATCTCAT 180
consensus_5505#1 ------------------------------------------------------------
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 GCGTACCACCGCCATCCGTCCGTCACTGAGCTCCTGCTTGCGTAGTGACGAGCGTTCTGG 240
consensus_5505#1 ----------ATCATCCCACCAACACCAACC------AAACCAACCAACCAACCTCCCCA 44
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TTTCGCTCAGCTCGTCTCGATTTCACACGGATTGGAATTCGGCCGCATTCCGCGTGGAAA 300
consensus_5505#1 CACCGCCGCCGTCGCGTAGCGCCCGCCCACCCCCGCGCTCG-CCGC---CGGCGGGCGAA 100
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 GCTTCGAGTTCTTGGTGCTTCTTGTTCTCCGCTGCGAAAACCGCAGCTTTAGATTCATCA 360
consensus_5505#1 ------------------CGCTCGCCATCCGCCCGCATCGCCATAG-----GATTCATCA 137
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 ATGTTGTTATCCTCTGAGGCTTCCTTTGTAATAAGAAGGCAGTGATCAATTTGTTTGACC 420
consensus_5505#1 ATGTTGTTATCCTCTGAGGCTTCCTTTGTAATAAGAAGGCAGTGATCAATTTGTTTGACC 197
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TGAGTACCGGGATGACCAGCAAAAATGTGCTAACTGATAGAACTCACAGAGATG------ 474
consensus_5505#1 TGAGTACCGGGATGACCAGCAAAAATGTGCTAACTGATAGAACTCACAGAGATGCTTGCA 257
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 --------GCTCTCGAGTTCATAAAAGCCGGCAAGATGTCAATAGAACTGTTGATCCCAA 526
consensus_5505#1 TCTTTCAGGCTCTCGAGTTCATAAAAGCCGGCAAGATGTCAATAGAACTGTTGATCCCAA 317
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 AATAGGTTGTGTAGAGGACAAATTACAGGTAGTAGCTAGTACTAGGAATTCTTCAAGCAA 586
consensus_5505#1 AATAGGTTGTGTAGAGGACAAATTACAGGTAGTAGCTAGTACTAGGAATTCTTCAAGCAA 377
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CAAATCAACCATATCTCCAATGAACAGATTAGTAGCAATGGAGATGTCCAAAGGAGTGGA 646
consensus_5505#1 CAAATCAACCATATCTCCAATGAACAGATTAGTAGCAATGGAGATGTCCAAAGGAGTGGA 437
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 ATCAAAGAGGAAGCCACCTAGTGTCGTTGCCAGACTAATGGGGCTTGATGATGATCTACC 706
consensus_5505#1 ATCAAAGAGGAAGCCACCTAGTGTCGTTGCCAGACTAATGGGGCTTGATGATGATCTACC 497
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TGCTAAAGAACCAGCATTACAATCTTCTAGAAGAAATTTGCGGAGAAGTCATTCACTTGA 766
consensus_5505#1 TGCTAAAGAACCAGCATTACAATCTTCTAGAAGAAATTTGCGGAGAAGTCATTCACTTGA 557
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TAATTTGGCAGCAACAAACAGGCCCCAACAACAGCAAGAGCAGCATTACAGCAGGACAAC 826
consensus_5505#1 TAATTTGGCAGCAACAAACAGGCCCCAACAACAGCAAGAGCAGCATTACAGCAGGACAAC 617
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 ACCAAACATACACATAGGCCCCAAAGAGACAGTTGAATTTAAGGATGTGTACGAAGTCTC 886
consensus_5505#1 ACCAAACATACACATAGGCCCCAAAGAGACAGTTGAATTTAAGGATGTGTACGAAGTCTC 677
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TGAAGATCCATTAAAGAGACATCATATTCTGGGGCAAAATTTTCCTTGGGAAAGATCTTC 946
consensus_5505#1 TGAAGATCCATTAAAGAGACATCATATTCTGGGGCAAAATTTTCCTTGGGAAAGATCTTC 737
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TGGGAACAAGAGTGACACTAGGATCGAAGCTGTTCGACAGAAGTTCATGGAAGCAAAACG 1006
consensus_5505#1 TGGGAACAAGAGTGACACTAGGATCGAAGCTGTTCGACAGAAGTTCATGGAAGCAAAACG 797
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CCTTGCCACAAATGAGAATCTCATCCATTCAAAGCAGTTTCAAGAAGCTCTTGAGGTTCT 1066
consensus_5505#1 CCTTGCCACAAATGAGAATCTCATCCATTCAAAGCAGTTTCAAGAAGCTCTTGAGGTTCT 857
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 AAGTTCAAACAGGGAGTTGTTTCTGAAGTTTCTTGAAGAACCAAGCCCTGCTTTCTTGAA 1126
consensus_5505#1 AAGTTCAAACAGGGAGTTGTTTCTGAAGTTTCTTGAAGAACCAAGCCCTGCTTTCTTGAA 917
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 GCAGCTCGATGGACTTGACACAACGCCTGCACCGCCTCCGACGAAGCGTATTACAGTGTT 1186
consensus_5505#1 GCAGCTCGATGGACTTGACACAACGCCTGCACCGCCTCCGACGAAGCGTATTACAGTGTT 977
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 GAAGCCAATCAAATCTGTTGAGAACAATGGAATAAGAGAAACCAGAACACACCAAGTTAT 1246
consensus_5505#1 GAAGCCAATCAAATCTGTTGAGAACAATGGAATAAGAGAAACCAGAACACACCAAGTTAT 1037
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TAATGAAGAAAATGAACTTGTGATGGGAAAGACTCACCAGAGATCTTACTCAGCAGATGA 1306
consensus_5505#1 TAATGAAGAAAATGAACTTGTGATGGGAAAGACTCACCAGAGATCTTACTCAGCAGATGA 1097
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CAACTTCTCCAAGTCAACTAGGATAGTGGTCCTAAAGCCTAGCCCTGGGAAGCCTAATAG 1366
consensus_5505#1 CAACTTCTCCAAGTCAACTAGGATAGTGGTCCTAAAGCCTAGCCCTGGGAAGCCTAATAG 1157
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 AACAGGAGCCAGGCTAACTGCCCGAGCAGCTCCATCTGAACAAACTCGGCGGATCGACTT 1426
consensus_5505#1 AACAGGAGCCAGGCTAACTGCCCGAGCAGCTCCATCTGAACAAACTCGGCGGATCGACTT 1217
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CCATGGAGGTTTACAAGATGATGCATCCATCCTAGGATCTAGGGAATTACTGCATGGTTC 1486
consensus_5505#1 CCATGGAGGTTTACAAGATGATGCATCCATCCTAGGATCTAGGGAATTACTGCATGGTTC 1277
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 GGTTCAGCACATGCCAGAGAGTCGTCATCGGCGGGACGAATCCCTGATATCATCCACATA 1546
consensus_5505#1 GGTTCAGCACATGCCAGAGAGTCGTCATCGGCGGGACGAATCCCTGATATCATCCACATA 1337
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TTCAAATGGGTATGGTGGAGATGAAAGCTCTTTCAGTGGGTCAGAAGTTGACTACATTGA 1606
consensus_5505#1 TTCAAATGGGTATGGTGGAGATGAAAGCTCTTTCAGTGGGTCAGAAGTTGACTACATTGA 1397
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TGAAGGAGGTAGCCCAAGTGACTCAGATGCAGTCAGTCCAATGTCGCGACATTCATGGGA 1666
consensus_5505#1 TGAAGGAGGTAGCCCAAGTGACTCAGATGCAGTCAGTCCAATGTCGCGACATTCATGGGA 1457
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TTACATCAGAAGACACAACAGTCCTCACTCAGCCTCTACTTTTAGCAGGGCCCATTCACA 1726
consensus_5505#1 TTACATCAGAAGACACAACAGTCCTCACTCAGCCTCTACTTTTAGCAGGGCCCATTCACA 1517
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TTCACCTGAGTCATCTGTGATCAGGGAAGCCAAAAAACGGCTTTCAGAGAGATGGGCAAT 1786
consensus_5505#1 TTCACCTGAGTCATCTGTGATCAGGGAAGCCAAAAAACGGCTTTCAGAGAGATGGGCAAT 1577
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 GGTATCATACAATGAGATCAATCAAGAACAAGTACCTTTGCGAAGGAGCTCAACCACCTT 1846
consensus_5505#1 GGTATCATACAATGAGATCAATCAAGAACAAGTACCTTTGCGAAGGAGCTCAACCACCTT 1637
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 GGGTGAGATGCTCTCCCTTCAAGTAGCTAAGAAAGAAGAAGCTGTTGCTGGGATAATTTC 1906
consensus_5505#1 GGGTGAGATGCTCTCCCTTCAAGTAGCTAAGAAAGAAGAAGCTGTTGCTGGGATAATTTC 1697
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TGTTTCAAGCAACCGGTCAAGTGGCACAGAAAATGAGTTGGCCATGAAAGATGCATGCAA 1966
consensus_5505#1 TGTTTCAAGCAACCGGTCAAGTGGCACAGAAAATGAGTTGGCCATGAAAGATGCATGCAA 1757
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 ATCTACTTTAAGAGAGTACGATGAAAATGGGAAGAGCTCTCCAAGGAATTTAGCAAAATC 2026
consensus_5505#1 ATCTACTTTAAGAGAGTACGATGAAAATGGGAAGAGCTCTCCAAGGAATTTAGCAAAATC 1817
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 AAAATCTGTCCCAGTGTCTTCATCTATATTTGACAACGTAGCAGTGAATGCTCAATCTGC 2086
consensus_5505#1 AAAATCTGTCCCAGTGTCTTCATCTATATTTGACAACGTAGCAGTGAATGCTCAATCTGC 1877
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 AAATTCTGAAGGGACTCCGAAGGTGTTTACAAAGTCAGGTAGAGCAAAATTATCTTTCAC 2146
consensus_5505#1 AAATTCTGAAGGGACTCCGAAGGTGTTTACAAAGTCAGGTAGAGCAAAATTATCTTTCAC 1937
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 GGGGAAAATATCAAGTTTTTTCTTCCCAGGCAATAAAAGGCCAACAAAAGAGAAAACTTC 2206
consensus_5505#1 GGGGAAAATATCAAGTTTTTTCTTCCCAGGCAATAAAAGGCCAACAAAAGAGAAAACTTC 1997
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CCTCTCATCTGATAGCTCAGGCGAGATATTTGGATGTATCGGGCACATGGTGCCGCAGTC 2266
consensus_5505#1 CCTCTCATCTGATAGCTCAGGCGAGATATTTGGATGTATCGGGCACATGGTGCCGCAGTC 2057
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TGATCACAATCTTGGTCCTGATGAACAAATGGCTTTTTGCAAGGATGAAGCTGATAATTC 2326
consensus_5505#1 TGATCACAATCTTGGTCCTGATGAACAAATGGCTTTTTGCAAGGATGAAGCTGATAATTC 2117
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CACCAATCATGCTCCCTGTTCTACAAAAGATGCTGGTTCCATAGAAGTACCTGTATCTTC 2386
consensus_5505#1 CACCAATCATGCTCCCTGTTCTACAAAAGATGCTGGTTCCATAGAAGTACCTGTATCTTC 2177
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TGACTGTGTAAGTGGAGATGTTGATGAAGTAAAATCAAATGGTGATCTAAAATCTATCCA 2446
consensus_5505#1 TGACTGTGTAAGTGGAGATGTTGATGAAGTAAAATCAAATGGTGATCTAAAATCTATCCA 2237
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CGATGAGACTAGTCCTACTTCAATTCTTGACACGGTTTTTGAAGATAGCAACAGTAATGA 2506
consensus_5505#1 CGATGAGACTAGTCCTACTTCAATTCTTGACACGGTTTTTGAAGATAGCAACAGTAATGA 2297
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 ACCTGAATCTTCAAGAAGAACTTCCTGCACCGAGAGGGTTGCCTTACGATGCCCTGCTAT 2566
consensus_5505#1 AACTGAATCTTCAAGAAGAACTTCCTGCACCGAGAGGGTTGCCTTACGATGCCCTGCTAT 2357
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CGATTCTGTTGCCCGCTCATTTTCATGGGAAGATACCAACTCAGGTTCTCCGTTGCTAGG 2626
consensus_5505#1 CGATTCTGTTGCCCGCTCATTTTCATGGGAAGATACCAACTCAGGTTCTCCGTTGCTAGG 2417
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TGGCCTAAAGCATTCCAATGTAGATGATGCCGATTATGATGATGGTGAACTAAAATGTTA 2686
consensus_5505#1 TGGCCTAAAGCATTCCAATGTAGATGATGCCGATTATGATGATGATGAACTAAAATGTTA 2477
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CTCTCTTGTACAAGAGATAGTATCATCTGCTGGATTATGCCATCTGCAGTTAAGTATGGT 2746
consensus_5505#1 CTCTCTTGTACAAGAGATAGTATCATCTGCTGGATTATGCCATCTGCAGTTAAGTATGGT 2537
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CTTCACAGGGTGGTACCTGCCTGAATCCCCCCTTGATCCTGCATTGTGTGACAAGTTCTT 2806
consensus_5505#1 CTTCACAGGGTGGTACCTGCCTGAATCCCCCCTTGATCCTGCATTGTGTGACAAGTTCTT 2597
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 GGATCGCAAGGAGGAGGATGCTAAATCGAGGGAGCGAAGGTCACACCAAAAGCTCATTTT 2866
consensus_5505#1 GGATCGCAAGGAGGAGGATGCTAAATCGAGGGAGCGAAGGTCACACCAAAAGCTCATTTT 2657
consensus_5505#2 --------------------------------------------------------TTTT 4
****
consensus_5505#0 CGA--TTGTGTAAATATGGCCTTGGTTGAGATTGGCCAGGATACGTTACTATGCAGCTAT 2924
consensus_5505#1 CGA--TTGTGTAAATATGGCCTTGGTTGAGATTGGCCAGGATACGTTACTATGCAGCTAT 2715
consensus_5505#2 CGGATTTGTGGTAATATGGCCTTGGTTGAGATTG--CCAGATACGTTNCTATCCA-CTAT 61
** ***** ********************** * ******** **** ** ****
consensus_5505#0 CCATGGAGTAGAGCATGCTTAAGAACATGGAGGGAGAAACT-ATCTGAAACCTTGGGTGA 2983
consensus_5505#1 CCATGGAGTAGAGCATGCTTAAGAACATGGAGGGAGAAACT-ATCTGAAACCTTGGGTGA 2774
consensus_5505#2 CCATGGAGTAGA-CATGCTTAAGAACATGGAGGGAGAAACTTATCTGAAACCTTGGTTGA 120
************ **************************** ************** ***
consensus_5505#0 AGAAGTATGGAACATC-GTGAGCGATTGGCTTTATGGAGATGGGAG-CTTTGCGGCAAAC 3041
consensus_5505#1 AGAAGTATGGAACATC-GTGAGCGATTGGCTTTATGGAGATGGGAG-CTTTGCGGTAAAC 2832
consensus_5505#2 AGAAGTATGGAACATCTGTGAGCGATTGGCTTTATGGAGATGGGAGTCTTTGCGGCAAAC 180
**************** ***************************** ******** ****
consensus_5505#0 AAGGACGACA-ATGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAA 3100
consensus_5505#1 AAGGACGACA-ATGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAA 2891
consensus_5505#2 AAGGNCGACACATGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAA 240
**** ***** *************************************************
consensus_5505#0 GGGTTGGATTAAGCTATTGACAATGGAAACA-GATGAGATCACTGAGCAGATTGCCAGTG 3159
consensus_5505#1 GGGTTGGATTAAGCTATTGACAATGGAAACA-GATGAGATCACTGAGCAGATTGCCAGTG 2950
consensus_5505#2 GGGTTGGATTAAGCTATTGACAATGGACACAAGATGAGATCACTGAGCAGATTCCCAGTG 300
*************************** *** ********************* ******
consensus_5505#0 AAGTGTTGGAGGACA-TTGTCACAGATTCTGTGGAGCATCTGTCAAT-TTGTTGTTCAGA 3217
consensus_5505#1 AAGTGTTGGAGGACA-TTGTCACAGATTCTGTGGAGCATCTGTCAAT-TTGTTGTTCAGA 3008
consensus_5505#2 AA-TGTTGGAGGACAATTGTCACAGATTCTGTGGAGCATCTGTCAATGTTGTTGTTCAGA 359
** ************ ******************************* ************
consensus_5505#0 GCATGGCATTT--CTATGCC-AGTAGCAAATCTGTAGGAAGCAATT---TCTTTCAT-AT 3270
consensus_5505#1 GCATGGCATTT--CAATGCC-AGTAGCAAATCTGTAGGAAGCAATT---TCTTTCAT-AT 3061
consensus_5505#2 GCATGGCATGTGTCAATCCCCAGTACAAAATCTGTAGGAACACATTGTCTGTTGCATGAT 419
********* * * ** ** **** ************* *** * ** *** **
consensus_5505#0 GAGCACTTGCCTTGAATTTTGTTGTGCTGAAAGAATTCCTCAGCAGCTTCATAGATTGTA 3330
consensus_5505#1 GAGCACTTGCCTTGAATTTTGTTGTGCTGAAAGAATTCCTCAGCAGCTTCATAGATTGTA 3121
consensus_5505#2 GACANCTTCCCTNGAATTTTGTTGT-CTGAAAGAATTCCTCA-CAGCTTCATAGATTGTA 477
** *** *** ************ **************** *****************
consensus_5505#0 TATAAGTCCATGTAGTTGCTTACTCTTGCTTCTGCTTATACCTACAGCTCAGATTGGCCA 3390
consensus_5505#1 TATAAGTCCATGTAGTTGCTTACTCTTGCTTCTGCTTATACCTACAGCTCAGATTGGCCA 3181
consensus_5505#2 TATAAGTCCATGTAGTTGCTTACTCTTGCTTCTGCTTATACCTAAAAAAAAAA------- 530
******************************************** * * *
consensus_5505#0 AAATCGTGCAGTTCTTTACTCTGTAGATGTCCTACTGGTCAAATTGGGTTAGTCAGAAGT 3450
consensus_5505#1 AAATCGTGCAGTTCTTTACTCTGTAGATGTCCTACTGGTCAAATTGGGTTAGTCAGAAGT 3241
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 CTAACAATAGCATATGGTGTCAGTAGTATTGTAGCTTTTTGGGAAGCGAAATACTAACTT 3510
consensus_5505#1 CTAACAATAGCATATGGTGTCAGTAGTATTGTAGCTTTTTGGGAAGCGAAATACTAACTT 3301
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 TTAGTGGCCGTGTGTGTTTGACTTTGAGGTGCAGCAGAACACTGCTCCATATGACCATAT 3570
consensus_5505#1 TTAGTGGCCGTGTGTGTTTGACTTTGAGGTGCAGCAGAACACTGCTCCATATGACCATAT 3361
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 GCTGCAAAGAGTATTATATAATGCATTCCGGC---------------------------- 3602
consensus_5505#1 GCTGCAAAGAGTATTATATAATGCATTCCGGCGCCAGTTGGCAGCATCCTGGTGTCTTGA 3421
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 ------------------------------------------------------------
consensus_5505#1 GCTCTATGTCAAATTCGTCAATCTGAACGTCTGAATATAAAATTGAAACGAGGGCATCTT 3481
consensus_5505#2 ------------------------------------------------------------
consensus_5505#0 --
consensus_5505#1 AA 3483
consensus_5505#2 --
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||