Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5733 cluster # 5733       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5733#0 length = 263 sequences # 3  
consensusID : consensus_5733#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 263
fasta sequence 
                              [GAAAGACTGTGTTTGATGGTGTCCTTCGCCCAGGACAATTATTGATCATTCCGCAACATTATGCTGTCTTGAAGAAAGCAGAGGAAGGAT-GCCAATATATCGCAATCAAGA-CAAACGCTAACGCCTTCGTCAGCCACCTTGCAGGGAAAAACTCAGTATTCCGTG-CCTTGCCAGTTGATGTAGTCGCTAATCGCTAT-CNCTCAAGGGAGCAAGC--AG-CTCAAGA-ACAGGGAGAAGAGCACGTGTTGCTTACTCTAGATTTCACA]

[+] EMBL AA751213             [GAAAGACTGTGTTTGATGGTGTCCTTCGCCCAGGACAATTATTGATCATTCCGCAACATTATGCTGTCTTGAAGAAAGCAGAGGAAGGAT GCCAATATATCGCAATCAAGAMCAAACGCTAACTCCTTCGTCAGCCACCTT CAGGGAAAAACTCAGTATTCCGTGTCCTTGCCAGTTGATGTAGTCGCTAATCt                                                                           ]
[+] EMBL AA749712             [ AAAGACTGTGTTTGATGGTGTCCTTCGCCCAGGACAATTATTGATCATTCCGCAACATTATGCTGTCTTGAAGAAAGCAGAGGAAGGAT GCCAATATATCGCAATCAAGA CAAACGCTAACGCCTTCGTCAGCCACCTTGCAGGGAAAAACTCAGTATTCCGTG CCTTGCCAGTTGATGTAGTCGCTAAT GCTAT CNCTCAAGGGAGCAAGC  AG CTCAAGA ACA                                     ]
[+] EMBL AA749999             [                                            ATCATTCCGCAACATTATGCTGTCTTGAAGAAAGCAGAGGAAGGATGGCCAATATATCGCAATCAAGA CAAACGCTAACGCCTTCGTCAGCCACCTTGCAGGGAAAAACTCAGTATTCCGTG CCTTGCCAGTTGATGTAGTCGCTAATGGCTATCCTCTCAAGGGAGCAAGCCGAGTCTC AGACACAGGGAGAAGAGCACGTGTTGCTTACTCTAGATTTCACA]




>consensus_5733#0
GAAAGACTGTGTTTGATGGTGTCCTTCGCCCAGGACAATTATTGATCATTCCGCAACATT
ATGCTGTCTTGAAGAAAGCAGAGGAAGGATGCCAATATATCGCAATCAAGACAAACGCTA
ACGCCTTCGTCAGCCACCTTGCAGGGAAAAACTCAGTATTCCGTGCCTTGCCAGTTGATG
TAGTCGCTAATCGCTATCNCTCAAGGGAGCAAGCAGCTCAAGAACAGGGAGAAGAGCACG
TGTTGCTTACTCTAGATTTCACA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)