cluster # 6276

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6276 cluster # 6276 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6276#0 length = 1604 sequences # 4
consensusID : consensus_6276#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1604
fasta sequence
                              [TTCTTCTTTGCTGATAACCTAGTTGTGGTTGATCACAACAATGGGGATGTGTACATTTTATCATTACATGATGAATATTCTTCTGGTAATGGAGATGGAGATTACCAAAACTCAATACATAGTTTATGGTTAGCAAATACTGAGAAGAAGCTTCTCAGGATGGATGCCATGGCCCCAAGATTATCGATCAATGGAAACTCGTCGATCAATGGGAACTCATTTACCATATCATCCAGTGTGAATAAGCAAAGATTTGTCATCGAGAAATCAAAAGATGAATATATCANGAGATGTGCAGAGTTGCCTGGATTACATAAGAGACGGAGAAAGCTATGAATTGTGCTTAACTACTCAGATGAAGAGAAGAACGGATTATATGGATGCTTTGAAACTCTACCTGAAATTGCGAAAACAAAATCCAGCCCCTTATGCAGCTTGGCTTAACTTCTCCTCAGAAAACCTGAGTATATGTTGCTCTTCTCCTG-AAGGTTTCTGCGACTAGACCGAAATGCAATTCTGGAAGCAAAGCCAATCAAAGGTACTATAGCACGTGGCAGAACACCAGAGGAAGATGAATGCCTACGTTTGCAGTTGAAATACAGTGAAAAAGATCAAGCTGAGAACTTGATGATTGTTGACCTCCTAAGAAACGATCTTGGTAAGGTTTGTGAACCTGGGAGTGTGCATGTTCCTCGCCTCATGGATGTGGAATCATATAAAACTGTACATACCATGGTAAGTACCATTCGTGGAACCAAAATGTCGGACCTAAGCCCTGTCGATTGTGTAAAGGCTGCCTTTCCAGGAGGTTCAATGACCGGGGCCCCGAAAGTTAGATCCATGGAGATTCTTGATTCACTTGAAACTAGTCCGAGAGGAATATACTCAGGATCAGTTGGATTCTTTTCATATAACAAGACTTTTGACTTGAATATCGTGATCAGAACAGTTGTCCTGCACAATGGAGAAGCTTCGATTGGGGCAGGCGGGGCTATTGTAGCATTGTCAGATCCAGAAGCAGAGTACAATGAGATGCTGCTTAAAGCAAAAGCTCCAACAAAGGTGGTTGAAGAGTGCAGTCAACAAATATACAACCCAGATCGTTCGGATTCAATGCAGACAACCGTAAGTTAGAATGGAGGGTGAAAACGAGTCTTCTTATGAAAACACAACCAGCATTACAAGGTTTGGTATAC-AATGACCA-TCAGTTTGGATCTGAAAAATTCGATCTCCGCTGTTGGTGCACATATTAATGGCTAAACTACAAGGAAGTCGCAGCAC--ACCTATTCTATAATTGGGAATTCTAAAAGCAACAAAAGGACA-TTTTGCTGAAAGAAAGGTGCCTATGCCAAGGTGGTGAAAAGCACATTGGAGCAAAATTCATGGTGTACTACAATGTAGAGTTAGACTAGATTACAGCTGACATGCCTTCTCCACAAAACAACA-GTGCACATGATTTTATTGATTGATTGATTCCCCTATTGTGGTGATTGCACTGTGTAATAATAATAAACTGATAAAAGAAAGAAACCCATACTGAAATGCATTTCATAGCAGATTCATATATATATATATATATATTGCATGTATTTCCAAAAAAAAAA]

[+] EMBL CF323429             [TTCTTCTTTGCTGATAACCTAGTTGTGGTTGATCACAACAATGGGGATGTGTACATTTTATCATTACATGATGAATATTCTTCTGGTAATGGAGATGGAGATTACCAAAACTCAATACATAGTTTATGGTTAGCAAATACTGAGAAGAAGCTTCTCAGGATGGATGCCATGGCCCCAAGATTATCGATCAATGGAAACTCGTCGATCAATGGGAACTCATTTACCATATCATCCAGTGTGAATAAGCAAAGATTTGTCATCGAGAAATCAAAAGATGAATATATCANGAGATGTGCAGAGTTGCCTGGATTACATAAGAGACGGAGAAAGCTATGAATTGTGCTTAACTACTCAGATGAAGAGAAGAACGGATTATATGGATGCTTTGAAACTCTACCTGAAATTGCGAAAACAAAATCCAGCCCCTTATGCAGCTTGGCTTAACTTCTCCTCAGAAAACCTGAGTATATGTTGCTCTTCTCCTG AAGGTTTCTGCGACTAGACCGAAATGCAATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK059492             [                                                                                                                                               GAAGAAGCTTCTCAGGATGGATGCCATGGCCCCAAGATTATCGATCAATGGAAACTCGTCGATCAATGGGAACTCATTTACCATATCATCCAGTGTGAATAAGCAAAGATTTGTCATCGAGAAATCAAAAGATGAATATATCA GAGATGTGCAGAGTTGCCTGGATTACATAAGAGACGGAGAAAGCTATGAATTGTGCTTAACTACTCAGATGAAGAGAAGAACGGATTATATGGATGCTTTGAAACTCTACCTGAAATTGCGAAAACAAAATCCAGCCCCTTATGCAGCTTGGCTTAACTTCTCCTCAGAAAACCTGAGTATATGTTGCTCTTCTCCTGAAAGGTTTCTGCGACTAGACCGAAATGCAATTCTGGAAGCAAAGCCAATCAAAGGTACTATAGCACGTGGCAGAACACCAGAGGAAGATGAATGCCTACGTTTGCAGTTGAAATACAGTGAAAAAGATCAAGCTGAGAACTTGATGATTGTTGACCTCCTAAGAAACGATCTTGGTAAGGTTTGTGAACCTGGGAGTGTGCATGTTCCTCGCCTCATGGATGTGGAATCATATAAAACTGTACATACCATGGTAAGTACCATTCGTGGAACCAAAATGTCGGACCTAAGCCCTGTCGATTGTGTAAAGGCTGCCTTTCCAGGAGGTTCAATGACCGGGGCCCCGAAAGTTAGATCCATGGAGATTCTTGATTCACTTGAAACTAGTCCGAGAGGAATATACTCAGGATCAGTTGGATTCTTTTCATATAACAAGACTTTTGACTTGAATATCGTGATCAGAACAGTTGTCCTGCACAATGGAGAAGCTTCGATTGGGGCAGGCGGGGCTATTGTAGCATTGTCAGATCCAGAAGCAGAGTACAATGAGATGCTGCTTAAAGCAAAAGCTCCAACAAAGGTGGTTGAAGAGTGCAGTCAACAAATATACAACCCAGATCGTTCGGATTCAATGCAGACAACCGTAAGTTAGAATGGAGGGTGAAAACGAGTCTTCTTATGAAAACACAACCAGCATTACAAGGTTTGGTATAC AATGACCA TCAGTTTGGATCTGAAAAATTCGATCTCCGCTGTTGGTGCACATATTAATGGCTAAACTACAAGGAAGTCGCAGCAC  ACCTATTCTATAATTGGGAATTCTAAAAGCAACAAAAGGACA TTTTGCTGAAAGAAAGGTGCCTATGCCAAGGTGGTGAAAAGCACATTGGAGCAAAATTCATGGTGTACTACAATGTAGAGTTAGACTAGATTACAGCTGACATGCCTTCTCCACAAAACAACA GTGCACATGATTTTATTGATTGATTGATTCCCCTATTGTGGTGATTGCACTGTGTAATAATAATAAACTGATAAAAGAAAGAAACCCATACTGAAATGCATTTCATAGCAG                                               ]
[+] EMBL BM038009             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTACAA GTTTGGTATACAAANGACCANTCAGTTTGGATCTGAAAAATTCGATCTCCGCTGTTGGTGCACATATTAATGGCTAAACTACAAGGAATTCGCAGCACANACCTATTCTATAATTGGGAATTCTAAAAGCNACCAAAGGACACTTTTGCTGAAAGAAAGGTGCCTAT CCAAGGTGGTGAAAAGCACCTTGGACCAAAATTCATGGTGTACTACAATGTAGAGTTAGACTAGATTACAGCTGACAT CCTTCTCCACCAAACCACACGTGCACATGATTTTATTGATTGATTGATTCCCCTATTGTGGTGATTGCCCTGTGTAATAATAATAAACTGAT AAAGAAAGAAACCCATACTGAAATGCATTTCATA CAGATTCATATATATATATATATATATTGCATGTATTTCCAAAAAAAAAA]
[+] EMBL AU225438             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gccgcTGGGAATTCTAAAAGCAACAAAAGGACA TTTTGCTGAAAGAAAGGTGCCTATGCCAAGGTGGTGAAAAGCACATTGGAGCAAAATTCATGGTGTACTACAATGTAGAGTTAGACTAGATTACAGCTGACATGCCTTCTCCACAAAACAACA GTGCACATGATTTTAgcgg                                                                                                                                           ]




>consensus_6276#0
TTCTTCTTTGCTGATAACCTAGTTGTGGTTGATCACAACAATGGGGATGTGTACATTTTA
TCATTACATGATGAATATTCTTCTGGTAATGGAGATGGAGATTACCAAAACTCAATACAT
AGTTTATGGTTAGCAAATACTGAGAAGAAGCTTCTCAGGATGGATGCCATGGCCCCAAGA
TTATCGATCAATGGAAACTCGTCGATCAATGGGAACTCATTTACCATATCATCCAGTGTG
AATAAGCAAAGATTTGTCATCGAGAAATCAAAAGATGAATATATCANGAGATGTGCAGAG
TTGCCTGGATTACATAAGAGACGGAGAAAGCTATGAATTGTGCTTAACTACTCAGATGAA
GAGAAGAACGGATTATATGGATGCTTTGAAACTCTACCTGAAATTGCGAAAACAAAATCC
AGCCCCTTATGCAGCTTGGCTTAACTTCTCCTCAGAAAACCTGAGTATATGTTGCTCTTC
TCCTGAAGGTTTCTGCGACTAGACCGAAATGCAATTCTGGAAGCAAAGCCAATCAAAGGT
ACTATAGCACGTGGCAGAACACCAGAGGAAGATGAATGCCTACGTTTGCAGTTGAAATAC
AGTGAAAAAGATCAAGCTGAGAACTTGATGATTGTTGACCTCCTAAGAAACGATCTTGGT
AAGGTTTGTGAACCTGGGAGTGTGCATGTTCCTCGCCTCATGGATGTGGAATCATATAAA
ACTGTACATACCATGGTAAGTACCATTCGTGGAACCAAAATGTCGGACCTAAGCCCTGTC
GATTGTGTAAAGGCTGCCTTTCCAGGAGGTTCAATGACCGGGGCCCCGAAAGTTAGATCC
ATGGAGATTCTTGATTCACTTGAAACTAGTCCGAGAGGAATATACTCAGGATCAGTTGGA
TTCTTTTCATATAACAAGACTTTTGACTTGAATATCGTGATCAGAACAGTTGTCCTGCAC
AATGGAGAAGCTTCGATTGGGGCAGGCGGGGCTATTGTAGCATTGTCAGATCCAGAAGCA
GAGTACAATGAGATGCTGCTTAAAGCAAAAGCTCCAACAAAGGTGGTTGAAGAGTGCAGT
CAACAAATATACAACCCAGATCGTTCGGATTCAATGCAGACAACCGTAAGTTAGAATGGA
GGGTGAAAACGAGTCTTCTTATGAAAACACAACCAGCATTACAAGGTTTGGTATACAATG
ACCATCAGTTTGGATCTGAAAAATTCGATCTCCGCTGTTGGTGCACATATTAATGGCTAA
ACTACAAGGAAGTCGCAGCACACCTATTCTATAATTGGGAATTCTAAAAGCAACAAAAGG
ACATTTTGCTGAAAGAAAGGTGCCTATGCCAAGGTGGTGAAAAGCACATTGGAGCAAAAT
TCATGGTGTACTACAATGTAGAGTTAGACTAGATTACAGCTGACATGCCTTCTCCACAAA
ACAACAGTGCACATGATTTTATTGATTGATTGATTCCCCTATTGTGGTGATTGCACTGTG
TAATAATAATAAACTGATAAAAGAAAGAAACCCATACTGAAATGCATTTCATAGCAGATT
CATATATATATATATATATATTGCATGTATTTCCAAAAAAAAAA
clustalw multiple alignements is not computed in this case