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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6793#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3748 fasta sequence
[CTGAGCCAAGGAATCTCCTCCTCTTCTCTCTCCTTCGTGCTTCTCCAGTCTCCACCTCCCTGGGCGCTGTTGCCCCTTCCAAATCTGCGCCAACTGCGCCACCGTATCCCGGTTTTTTTTCCCCCGCTTCTTGTCGCTGCGCCCAATCAGGAGGCGAGGCTGCTGGCCTCGTTTCCTCCGCGCGAGGGTTGGGGCTTTCCGCGCCGCGACCAAGAAACGGTTCCCGGAGCAGGAGCTTGGAGGCTTCCGCGTGGTCTGGTGATTGAGCTCGGGACGACGGGAGGTGTAGTTCTGCGCGTCATTGCCGGGCTCAAGGTTGGATACTTGGATTTGGTGCGGATGTTCCTGTTTGCTACTGGTTTTGGGGACTTTTGAGGTGGGTGGTGGCGTCAGATTTGATCGCCTTTGGTGATCGATCCACCAGTCCTGGGGAGTAGGCCTAATCCCTCTATGAACAATACGATCGGAAAAGCAGTCTCCTGTTCAGATGCTGCCCATTAAACTAGTCCCAGTGTTGTACAAAGATTCTGTCTTTTGGCAGAATACAGTGATCCCCTCTGCTTCTTGTCCAGGGCAGAATACAGTTGCTCCAACTCGATGTTGGTATTGTAGGAGTGGATAAGTCGTAAGGATCTTTAAACTGCACGAGTGGAGCAAAGCCATGGATATGCCTACGCCATCCAACCGTGCTGGCTGCAATGGCAACACCGGCGGTACTATGGGCCCTTCAGATGATCCTTATGGTGCAGCAGCCATGAACCTTGATTGTTACTCGGAGATTTACAGCCCTTCGGTGGCCGACCAACTATTCTCGCTGCTAAATGATCCAGCTGCACACCGGATGTTTGCTATGTGGCCATCCATGGGATCATCGCCGTGTGCTGCTGGTACGAGTGAAGATATGCCGCTCGATGCATATTCTGGCCTAGGGGAGGCAGTGGAAGAACCTTCTCAAATAATGTCAGTGAATCCAACTGAAGCAGAGAAAACGGGCAAGAGTTCAGGCGAGCTTGGTTCGGACGATGGTGCCCATCAAGGGAGTAGCATGGTTCCAAGGTCTGTTGTGGGCAGTTCACTTGCTGACAGGATGCTCATGGCTTTGTCCTTGTTCAGGGAATCATTGGGCAGCGGTGCTCTTGCCCAAGTCTGGATGCCTGTTGAGCAGGAGGGTCATGTTGTGCTGAGTACATGTGAGCAACCTTTTCTACTCGACCAGGTTCTTGCAGGGTATCGAGAAGTATCCAGGCACTTTGTGTTTTCAGCGAAGGAGGAGCCTGGTCTACAGCCAGGGCTTCCAGGGAGGGTCTTCATCTCTGGGGTGCCAGAATGGACCTCAAGTGTCCTCTACTATAATAGGCCAGAGTATTTGAGGATGGAGCATGCTCTCCATCACGAGATACGTGGGTCACTTGCAATGCCAATTTATGACCCCAGCAAGGATTCTTGCTGTGCAGTGTTTGAGCTTGTTACAAGAAAGGAGAAGCCTGATTTCAGTGCAGAGATGGACAACGTTTGCAATGCCTTGCAGGCAGTGAACTTGAAGGCTACAAAAGGTTCTAGCAATCAGAAGTTTTATACAGAGAACCAGAAATTTGCCTTCACTGAGATTTTAGATGTTCTCAGAGCTATTTGCCATGCACATATGCTTCCACTGGCCCTTACATGGGTTCCTACATCAAATGGTATTGATGGTGGTTATGTTGTTGGAAAGGATGGTGCCAGTTTTTCACAATCAGGGAAAACAATAATACGCATCCATGAATCTGCATGTTATGTTAACGATGGAAAGATGCAAGGTTTTCTTCAAGCATGTGCCAGACGTCATCTTGAGAAAGGGCAAGGCATTGCAGGACGAGCACTCAAATCTAATTTGCCATTTTTCTCGCCTGATATAAGAGAGTACAGTATTGAGGATTACCCTCTTGCACACCATGCACGTAAGTTTAGTCTGCATGCTGCTGTTGCCATTCGTCTAAGGAGCACATACACTGGCAATGATGACTACATACTAGAATTCTTTCTCCCGGTCAGCTGCAAAGGCAGTGGAGAACAACAGATGTTGCTGAATAACCTCTCCAGTACAATGCAAAGAATATGCAAAAGTCTGCGAACAGTTTATGAAGCAGAAGTTGATAATGTTAATGCTGGTACTGCAGCTGTGTTCAGGAAAAACAATGAGAGTTGCTTGCCAACTGGACACACAGAAAGTTCTTCACATGGTGATCAGTCAATCACAGGAGCTTCATTCGAGGATACATCTTTAGCTAACAAGCCAGGAGTCATGGAACCTGAGTTGGCTGAGCAGGTACAGCCTAGTTCCATAGGACATGCAGAGAAAAAGCGCAGTACAGCTGAGAAGAATATTAGCTTGGATGTTCTTCGTAAGTACTTCTCTGGGAGCCTAAAGGATGCTGCAAAGAGCCTTGGTGTTTGTCCAACAACTTTGAAACGGATATGCCGGCATCATGGAATTTCACGATGGCCATCTCGCAAGATAAACAAGGTTAATCGTTCATTAAAGAAGATTCAAACTGTCATAAACTCTGTTCATGGTGTGGACAGATCCTTGCAATATGATCCTGCTACTGGATCTCTTGTTCCAGTAGTTTCTCTGCCAGAAAAGTTGACATTCCCTTCTTGCGATGGTTTGCCAACTCCATCAGTCGGAAAAACTGTGGAAGAGAATTCTGACCTAAAATCTGAAGAAGGGTGTTCTTTGCCTGATGGATCGCAAAGACAAAGTTGCCAGTTGCAGATCTCTGATGTGAAGAAAAGTAACGAGGATGAATTTCACATTGGCAGTGGTAACAGTGATTTTTATGGTGCAAATGCCACAGCAAAATCTAATTCTGAGGTCACACAAGGTCCATTATGTCCCACTGGTGCTTTTAGTGCTTTGCATCTCAAGGGAACAGATTGCACCAATCCTTCTAGCTCTCTCCGCCCAAGTTCCGAAAGCACCAGAAATCAAATAGTTGGAAGAAACTCACCATCTATACAACAAGAAGATCTTGATATGCTTGACAATCATGAAGCCGAGGACAAGGACCACATGCACCCTTCTACCTCTGGTATGACTGACTCTTCTAGCGGCAGCGCATCAAGCCACCCTACCTTCAAACAGAACACAAGAAGTGCTCTTAAAGATGCAGCCAGTCCTGCACTGACAGTTAAGGCAACCTACAACGGAGACACTGTGCGGTTCAAGTTCTTGCCATCTATGGGTTGGTATCACCTATTGGAAGAAATAGCAAAGAGATTTAAGCTGCCAACCGGAGCATACCAGCTCAAGTACAAGGACGACGAGGATGAATGGGTCATCTTGGCAAACGATTCAGATCTCCAGGAGTGCGTCGATGTTCTCGACTCCATAGGGTCGCGAATCGTGAAACTCCAGGTACGAGATCTCCCTTGCATCGTCAGCAGCTCGGGAAGCAGCA-CCTGCTTGCAGTTGGCGGCACATAGCTCATAACA-TGGTAGGGAATCCTGGGCTCCTGTCACCCAACCCTCAACTGTACCATATTACAGTAGGCTAGTCTTTGTTGTAGCAACAGCCAATAGGGTTTGTATTATGTATGCAGTAGGGTATATTATGCAGTTTAGCTAGCATCAACGGTGGAGTCATCATCCCACACAGATCAGATCATATTCTCGCAAGAAACAATGCCATTAAGGTCTTAAGTTTGTTGAACACGAGTACATGACAATAACCTGTTGTCATGATGGTGTACCGTGCTTAAAAAAAAAA]
[+] EMBL AK103154 [CTGAGCCAAGGAATCTCCTCCTCTTCTCTCTCCTTCGTGCTTCTCCAGTCTCCACCTCCCTGGGCGCTGTTGCCCCTTCCAAATCTGCGCCAACTGCGCCACCGTATCCCGGTTTTTTTTCCCCCGCTTCTTGTCGCTGCGCCCAATCAGGAGGCGAGGCTGCTGGCCTCGTTTCCTCCGCGCGAGGGTTGGGGCTTTCCGCGCCGCGACCAAGAAACGGTTCCCGGAGCAGGAGCTTGGAGGCTTCCGCGTGGTCTGGTGATTGAGCTCGGGACGACGGGAGGTGTAGTTCTGCGCGTCATTGCCGGGCTCAAGGTTGGATACTTGGATTTGGTGCGGATGTTCCTGTTTGCTACTGGTTTTGGGGACTTTTGAGGTGGGTGGTGGCGTCAGATTTGATCGCCTTTGGTGATCGATCCACCAGTCCTGGGGAGTAGGCCTAATCCCTCTATGAACAATACGATCGGAAAAGCAGTCTCCTGTTCAGATGCTGCCCATTAAACTAGTCCCAGTGTTGTACAAAGATTCTGTCTTTTGGCAGAATACAGTGATCCCCTCTGCTTCTTGTCCAGGGCAGAATACAGTTGCTCCAACTCGATGTTGGTATTGTAGGAGTGGATAAGTCGTAAGGATCTTTAAACTGCACGAGTGGAGCAAAGCCATGGATATGCCTACGCCATCCAACCGTGCTGGCTGCAATGGCAACACCGGCGGTACTATGGGCCCTTCAGATGATCCTTATGGTGCAGCAGCCATGAACCTTGATTGTTACTCGGAGATTTACAGCCCTTCGGTGGCCGACCAACTATTCTCGCTGCTAAATGATCCAGCTGCACACCGGATGTTTGCTATGTGGCCATCCATGGGATCATCGCCGTGTGCTGCTGGTACGAGTGAAGATATGCCGCTCGATGCATATTCTGGCCTAGGGGAGGCAGTGGAAGAACCTTCTCAAATAATGTCAGTGAATCCAACTGAAGCAGAGAAAACGGGCAAGAGTTCAGGCGAGCTTGGTTCGGACGATGGTGCCCATCAAGGGAGTAGCATGGTTCCAAGGTCTGTTGTGGGCAGTTCACTTGCTGACAGGATGCTCATGGCTTTGTCCTTGTTCAGGGAATCATTGGGCAGCGGTGCTCTTGCCCAAGTCTGGATGCCTGTTGAGCAGGAGGGTCATGTTGTGCTGAGTACATGTGAGCAACCTTTTCTACTCGACCAGGTTCTTGCAGGGTATCGAGAAGTATCCAGGCACTTTGTGTTTTCAGCGAAGGAGGAGCCTGGTCTACAGCCAGGGCTTCCAGGGAGGGTCTTCATCTCTGGGGTGCCAGAATGGACCTCAAGTGTCCTCTACTATAATAGGCCAGAGTATTTGAGGATGGAGCATGCTCTCCATCACGAGATACGTGGGTCACTTGCAATGCCAATTTATGACCCCAGCAAGGATTCTTGCTGTGCAGTGTTTGAGCTTGTTACAAGAAAGGAGAAGCCTGATTTCAGTGCAGAGATGGACAACGTTTGCAATGCCTTGCAGGCAGTGAACTTGAAGGCTACAAAAGGTTCTAGCAATCAGAAGTTTTATACAGAGAACCAGAAATTTGCCTTCACTGAGATTTTAGATGTTCTCAGAGCTATTTGCCATGCACATATGCTTCCACTGGCCCTTACATGGGTTCCTACATCAAATGGTATTGATGGTGGTTATGTTGTTGGAAAGGATGGTGCCAGTTTTTCACAATCAGGGAAAACAATAATACGCATCCATGAATCTGCATGTTATGTTAACGATGGAAAGATGCAAGGTTTTCTTCAAGCATGTGCCAGACGTCATCTTGAGAAAGGGCAAGGCATTGCAGGACGAGCACTCAAATCTAATTTGCCATTTTTCTCGCCTGATATAAGAGAGTACAGTATTGAGGATTACCCTCTTGCACACCATGCACGTAAGTTTAGTCTGCATGCTGCTGTTGCCATTCGTCTAAGGAGCACATACACTGGCAATGATGACTACATACTAGAATTCTTTCTCCCGGTCAGCTGCAAAGGCAGTGGAGAACAACAGATGTTGCTGAATAACCTCTCCAGTACAATGCAAAGAATATGCAAAAGTCTGCGAACAGTTTATGAAGCAGAAGTTGATAATGTTAATGCTGGTACTGCAGCTGTGTTCAGGAAAAACAATGAGAGTTGCTTGCCAACTGGACACACAGAAAGTTCTTCACATGGTGATCAGTCAATCACAGGAGCTTCATTCGAGGATACATCTTTAGCTAACAAGCCAGGAGTCATGGAACCTGAGTTGGCTGAGCAGGTACAGCCTAGTTCCATAGGACATGCAGAGAAAAAGCGCAGTACAGCTGAGAAGAATATTAGCTTGGATGTTCTTCGTAAGTACTTCTCTGGGAGCCTAAAGGATGCTGCAAAGAGCCTTGGTGTTTGTCCAACAACTTTGAAACGGATATGCCGGCATCATGGAATTTCACGATGGCCATCTCGCAAGATAAACAAGGTTAATCGTTCATTAAAGAAGATTCAAACTGTCATAAACTCTGTTCATGGTGTGGACAGATCCTTGCAATATGATCCTGCTACTGGATCTCTTGTTCCAGTAGTTTCTCTGCCAGAAAAGTTGACATTCCCTTCTTGCGATGGTTTGCCAACTCCATCAGTCGGAAAAACTGTGGAAGAGAATTCTGACCTAAAATCTGAAGAAGGGTGTTCTTTGCCTGATGGATCGCAAAGACAAAGTTGCCAGTTGCAGATCTCTGATGTGAAGAAAAGTAACGAGGATGAATTTCACATTGGCAGTGGTAACAGTGATTTTTATGGTGCAAATGCCACAGCAAAATCTAATTCTGAGGTCACACAAGGTCCATTATGTCCCACTGGTGCTTTTAGTGCTTTGCATCTCAAGGGAACAGATTGCACCAATCCTTCTAGCTCTCTCCGCCCAAGTTCCGAAAGCACCAGAAATCAAATAGTTGGAAGAAACTCACCATCTATACAACAAGAAGATCTTGATATGCTTGACAATCATGAAGCCGAGGACAAGGACCACATGCACCCTTCTACCTCTGGTATGACTGACTCTTCTAGCGGCAGCGCATCAAGCCACCCTACCTTCAAACAGAACACAAGAAGTGCTCTTAAAGATGCAGCCAGTCCTGCACTGACAGTTAAGGCAACCTACAACGGAGACACTGTGCGGTTCAAGTTCTTGCCATCTATGGGTTGGTATCACCTATTGGAAGAAATAGCAAAGAGATTTAAGCTGCCAACCGGAGCATACCAGCTCAAGTACAAGGACGACGAGGATGAATGGGTCATCTTGGCAAACGATTCAGATCTCCAGGAGTGCGTCGATGTTCTCGACTCCATAGGGTCGCGAATCGTGAAACTCCAGGTACGAGATCTCCCTTGCATCGTCAGCAGCTCGGGAAGCAGCA CCTGCTTGCAGTTGGCGGCACATAGCTCATAACA TGGTAGGGAATCCTGGGCTCCTGTCACCCAACCCTCAACTGTACCATATTACAGTAGGCTAGTCTTTGTTGTAGCAACAGCCAATAGGGTTTGTATTATGTATGCAGTAGGGTATATTATGCAGTTTAGCTAGCATCAACGGTGGAGTCATCATCCCACACAGATCAGATCATATTCTCGCAAGAAACAATGCCATTAAGGTCTTAAGTTTGTTGAACA ]
[+] EMBL AK060753 [ CCGACCAACTATTCTCGCTGCTAAATGATCCAGCTGCACACCGGATGTTTGCTATGTGGCCATCCATGGGATCATCGCCGTGTGCTGCTGGTACGAGTGAAGATATGCCGCTCGATGCATATTCTGGCCTAGGGGAGGCAGTGGAAGAACCTTCTCAAATAATGTCAGTGAATCCAACTGAAGCAGAGAAAACGGGCAAGAGTTCAGGCGAGCTTGGTTCGGACGATGGTGCCCATCAAGGGAGTAGCATGGTTCCAAGGTCTGTTGTGGGCAGTTCACTTGCTGACAGGATGCTCATGGCTTTGTCCTTGTTCAGGGAATCATTGGGCAGCGGTGCTCTTGCCCAAGTCTGGATGCCTGTTGAGCAGGAGGGTCATGTTGTGCTGAGTACATGTGAGCAACCTTTTCTACTCGACCAGGTTCTTGCAGGGTATCGAGAAGTATCCAGGCACTTTGTGTTTTCAGCGAAGGAGGAGCCTGGTCTACAGCCAGGGCTTCCAGGGAGGGTCTTCATCTCTGGGGTGCCAGAATGGACCTCAAGTGTCCTCTACTATAATAGGCCAGAGTATTTGAGGATGGAGCATGCTCTCCATCACGAGATACGTGGGTCACTTGCAATGCCAATTTATGACCCCAGCAAGGATTCTTGCTGTGCAGTGTTTGAGCTTGTTACAAGAAAGGAGAAGCCTGATTTCAGTGCAGAGATGGACAACGTTTGCAATGCCTTGCAGGCAGTGAACTTGAAGGCTACAAAAGGTTCTAGCAATCAGAAGTTTTATACAGAGAACCAGAAATTTGCCTTCACTGAGATTTTAGATGTTCTCAGAGCTATTTGCCATGCACATATGCTTCCACTGGCCCTTACATGGGTTCCTACATCAAATGGTATTGATGGTGGTTATGTTGTTGGAAAGGATGGTGCCAGTTTTTCACAATCAGGGAAAACAATAATACGCATCCATGAATCTGCATGTTATGTTAACGATGGAAAGATGCAAGGTTTTCTTCAAGCATGTGCCAGACGTCATCTTGAGAAAGGGCAAGGCATTGCAGGACGAGCACTCAAATCTAATTTGCCATTTTTCTCGCCTGATATAAGAGAGTACAGTATTGAGGATTACCCTCTTGCACACCATGCACGTAAGTTTAGTCTGCATGCTGCTGTTGCCATTCGTCTAAGGAGCACATACACTGGCAATGATGACTACATACTAGAATTCTTTCTCCCGGTCAGCTGCAAGGGCAGTGGAGAACAACAGATGTTGCTGAATAACCTCTCCAGTACAATGCAAAGAATATGCAAAAGTCTGCGAACAGTTTATGAAGCAGAAGTTGATAATGTTAATGCTGGTACTGCAGCTGTGTTCAGGAAAAACAATGAGAGTTGCTTGCCAACTGGACACACAGAAAGTTCTTCACATGGTGATCAATCAATCACAGGAGCTTCATTCGAGGATACATCTTTAGCTAACAAGCCAGGAGTCATGGAACCTGAGTTGGCTGAGCAGGTACAGCCTAGTTCCATAGGACATGCAGAGAAAAAGCGCAGTACAGCTGAGAAGAATATTAGCTTGGATGTTCTTCGTAAGTACTTCTCTGGGAGCCTAAAGGATGCTGCAAAGAGCCTTGGTGTTTGTCCAACAACTTTGAAACGGATATGCCGGCATCATGGAATTTCACGATGGCCATCTCGCAAGATAAACAAGGTTAATCGTTCATTAAAGAAGATTCAAACTGTCATAAACTCTGTTCATGGTGTGGACAGATCCTTGCAATATGATCCTGCTACTGGATCTCTTGTTCCAGTAGTTTCTCTGCCAGAAAAGTTGACATTCCCTTCTTGCGATGGTTTGCCAACTCCATCAGTCGGAAAAACTGTGGAAGAGAATTCTGACCTAAAATCTGAAGAAGGGTGTTCTTTGCCTGATGGATCGCAAAGACAAAGTTGCCAGTTGCAGATCTCTGATGTGAAGAAAAGTAACGAGGATGAATTTCACATTGGCAGTGGTAACAGTGATTTTTATGGTGCAAATGCCACAGCAAAATCTAATTCTGAGGTCACACAAGGTCCATTATGTCCCACTGGTGCTTTTAGTGCTTTGCATCTCAAGGGAACAGATTGCACCAATCCTTCTAGCTCTCTCCGCCCAAGTTCCGAAAGCACCAGAAATCAAATAGTTGGAAGAAACTCACCATCTATACAACAAGAAGATCTTGATATGCTTGACAATCATGAAGCCGAGGACAAGGACCACATGCACCCTTCTACCTCTGGTATGACTGACTCTTCTAGCGGCAGCGCATCAAGCCACCCTACCTTCAAACAGAACACAAGAAGTGCTCTTAAAGATGCAGCCAGTCCTGCACTGACAGTTAAGGCAACCTACAACGGAGACACTGTGCGGTTCAAGTTCTTGCCATCTATGGGTTGGTATCACCTATTGGAAGAAATAGCAAAGAGATTTAAGCTGCCAACCGGAGCATACCAGCTCAAGTACAAGGACGACGAGGATGAATGGGTCATCTTGGCAAACGATTCAGATCTCCAGGAGTGCGTCGATGTTCTCGACTCCATAGGGTCGCGAATCGTGAAACTCCAGGTACGAGATCTCCCTTGCATCGTCAGCAGCTCGGGAAGCAGCA CCTGCTTGCAGTTGGCGGCACATAGCTCATAACA TGGTAGGGAATCCTGGGCTCCTGTCACCCAACCCTCAACTGTACCATATTACAGTAGGCTAGTCTTTGTTGTAGCAACAGCCAATAGGGTTTGTATTATGTATGCAGTAGGGTATATTATGCAGTTTAGCTAGCATCAACGGTGGAGTCATCATCCCACACAGATCAGATCATATTCTCGCAAGAAACAATGCCATTAAGGTCTTAAGTTTGTTGAACACGAGTACATGACAATAACCTGTTGTC ]
[+] EMBL BI812722 [ CTATTGGAAG AAT CCCAAGAGATTTAA CTCCCAACCGGAGCATTCCAGCTCAAGTACAAGGACGACGAGGATGAATGGGTCATCTTGCCAAACGATTCAGATCTCCAGGAGTGC TCGATGTTCTCGACTCCATAGGGTCGCGAATCGTGAAACTCCAGGTACGAGATCTCCCTTGCATCGTCA CAGCTCGGGAA CAGCACCCTGCTT CAGTTGGCGGCACATAGCTCATAACACTGGTAGGGAATCCTGGGCTCCTGTCACCCAACCCTCAACTGTACCATATTACAGTAGGCTAGTCTTTGTTGTAGCAACAGCCAATAGGGTTTGTATTATGCAT CAGTAGGGTATATTAT CAGTTTAGCTAGCATCAACGGTGGAGTCATCATCCCACACAGATCAGATCATATTCTCGCAAGAAAC ATGCCATTAAGGTCTTAAGTTTGTTGAACACGAGTACATGACCATAACCTGTTGTCATGATGGTGTACCGTGCTTAAAAAAAAAA]
consensusID : consensus_6793#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 684 fasta sequence
[GCCTTCTAAAAATCGAGCCAGTTCTGCATTGACAGTTAAGCCAGCCTCCAAGGGAGGCCACTGTGCGGTTCAAGTTCTTGCCATCTATGGGGTTGGTATCCCCCTATTGCAAGAAATAGCAGAGATATGTAAGCGGCCAGCCGGAGCATTCCAGCTCAAGTACAAGGGCGACGAGGATGAATGGGTCATCTTGGCAAACAATTCAGATCTCCAGGAGTGGGTCGATGTTCTCGACTCCATAGGGTCGCGAATCGTGAAACTCCAGGTACGAGATCTCCCTTGCATCGTCAGCAGCTCGGGAAGCAGCACCTGCTTGCAGTTGGCGGCACATAGCTCATAACATGGTAGGGAATCCTGGGCTCCTGTCACCCAACCCTCAACTGTACCATATTACAGTAGGCTAGTCTTTGTTGTAGCAACAGCCAATAGGGTTTGTATTATGCATGCAGTAGGGTATATTATGCAGTTTAGCTAGCATCAACGGTGGAGTCATCATCCCACACAGATCAGATCATATTCTCGCAAGAAACAATGCCATTAAGGTCTTAAGTTTGTTGAACCCGAGTACATGACAATAACCTGTTGTCATGATGGTGTACAGTGCTTGTGAATCGTGGTCCTGGCTCTCTGTTGTACTCCCTCCGGTTTCATTTTAATTAACGTTTTAGCCAAAAAAAAAAAAAA]
[-] EMBL CA762753 [GCCTTCTAAAAATCGAGCCAGTTCTGCATTGACAGTTAAGCCAGCCTCCAAGGGAGGCCACTGTGCGGTTCAAGTTCTTGCCATCTATGGGGTTGGTATCCCCCTATTGCAAGAAATAGCAGAGATATGTAAGCGGCCAGCCGGAGCATTCCAGCTCAAGTACAAGGGCGACGAGGATGAATGGGTCATCTTGGCAAACAATTCAGATCTCCAGGAGTGGGTCGATGTTCTCGACTCCATAGGGTCGCGAATCGTGAAACTCCAGGTACGAGATCTCCCTTGCATCGTCAGCAGCTCGGGAAGCAGCACCTGCTTGCAGTTGGCGGCACATAGCTCATAACATGGTAGGGAATCCTGGGCTCCTGTCACCCAACCCTCAACTGTACCATATTACAGTAGGCTAGTCTTTGTTGTAGCAACAGCCAATAGGGTTTGTATTATGCATGCAGTAGGGTATATTATGCAGTTTAGCTAGCATCAACGGTGGAGTCATCATCCCACACAGATCAGATCATATTCTCGCAAGAAACAATGCCATTAAGGTCTTAAGTTTGTTGAACCCGAGTACATGACAATAACCTGTTGTCATGATGGTGTACAGTGCTTGTGAATCGTGGTCCTGGCTCTCTGTTGTACTCCCTCCGGTTTCATTTTAATTAACGTTTTAGCCAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6793#0 CTGAGCCAAGGAATCTCCTCCTCTTCTCTCTCCTTCGTGCTTCTCCAGTCTCCACCTCCC 60
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TGGGCGCTGTTGCCCCTTCCAAATCTGCGCCAACTGCGCCACCGTATCCCGGTTTTTTTT 120
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CCCCCGCTTCTTGTCGCTGCGCCCAATCAGGAGGCGAGGCTGCTGGCCTCGTTTCCTCCG 180
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CGCGAGGGTTGGGGCTTTCCGCGCCGCGACCAAGAAACGGTTCCCGGAGCAGGAGCTTGG 240
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 AGGCTTCCGCGTGGTCTGGTGATTGAGCTCGGGACGACGGGAGGTGTAGTTCTGCGCGTC 300
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 ATTGCCGGGCTCAAGGTTGGATACTTGGATTTGGTGCGGATGTTCCTGTTTGCTACTGGT 360
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TTTGGGGACTTTTGAGGTGGGTGGTGGCGTCAGATTTGATCGCCTTTGGTGATCGATCCA 420
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CCAGTCCTGGGGAGTAGGCCTAATCCCTCTATGAACAATACGATCGGAAAAGCAGTCTCC 480
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TGTTCAGATGCTGCCCATTAAACTAGTCCCAGTGTTGTACAAAGATTCTGTCTTTTGGCA 540
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 GAATACAGTGATCCCCTCTGCTTCTTGTCCAGGGCAGAATACAGTTGCTCCAACTCGATG 600
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TTGGTATTGTAGGAGTGGATAAGTCGTAAGGATCTTTAAACTGCACGAGTGGAGCAAAGC 660
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CATGGATATGCCTACGCCATCCAACCGTGCTGGCTGCAATGGCAACACCGGCGGTACTAT 720
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 GGGCCCTTCAGATGATCCTTATGGTGCAGCAGCCATGAACCTTGATTGTTACTCGGAGAT 780
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TTACAGCCCTTCGGTGGCCGACCAACTATTCTCGCTGCTAAATGATCCAGCTGCACACCG 840
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 GATGTTTGCTATGTGGCCATCCATGGGATCATCGCCGTGTGCTGCTGGTACGAGTGAAGA 900
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TATGCCGCTCGATGCATATTCTGGCCTAGGGGAGGCAGTGGAAGAACCTTCTCAAATAAT 960
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 GTCAGTGAATCCAACTGAAGCAGAGAAAACGGGCAAGAGTTCAGGCGAGCTTGGTTCGGA 1020
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CGATGGTGCCCATCAAGGGAGTAGCATGGTTCCAAGGTCTGTTGTGGGCAGTTCACTTGC 1080
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TGACAGGATGCTCATGGCTTTGTCCTTGTTCAGGGAATCATTGGGCAGCGGTGCTCTTGC 1140
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CCAAGTCTGGATGCCTGTTGAGCAGGAGGGTCATGTTGTGCTGAGTACATGTGAGCAACC 1200
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TTTTCTACTCGACCAGGTTCTTGCAGGGTATCGAGAAGTATCCAGGCACTTTGTGTTTTC 1260
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 AGCGAAGGAGGAGCCTGGTCTACAGCCAGGGCTTCCAGGGAGGGTCTTCATCTCTGGGGT 1320
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 GCCAGAATGGACCTCAAGTGTCCTCTACTATAATAGGCCAGAGTATTTGAGGATGGAGCA 1380
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TGCTCTCCATCACGAGATACGTGGGTCACTTGCAATGCCAATTTATGACCCCAGCAAGGA 1440
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TTCTTGCTGTGCAGTGTTTGAGCTTGTTACAAGAAAGGAGAAGCCTGATTTCAGTGCAGA 1500
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 GATGGACAACGTTTGCAATGCCTTGCAGGCAGTGAACTTGAAGGCTACAAAAGGTTCTAG 1560
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CAATCAGAAGTTTTATACAGAGAACCAGAAATTTGCCTTCACTGAGATTTTAGATGTTCT 1620
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CAGAGCTATTTGCCATGCACATATGCTTCCACTGGCCCTTACATGGGTTCCTACATCAAA 1680
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TGGTATTGATGGTGGTTATGTTGTTGGAAAGGATGGTGCCAGTTTTTCACAATCAGGGAA 1740
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 AACAATAATACGCATCCATGAATCTGCATGTTATGTTAACGATGGAAAGATGCAAGGTTT 1800
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TCTTCAAGCATGTGCCAGACGTCATCTTGAGAAAGGGCAAGGCATTGCAGGACGAGCACT 1860
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CAAATCTAATTTGCCATTTTTCTCGCCTGATATAAGAGAGTACAGTATTGAGGATTACCC 1920
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TCTTGCACACCATGCACGTAAGTTTAGTCTGCATGCTGCTGTTGCCATTCGTCTAAGGAG 1980
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CACATACACTGGCAATGATGACTACATACTAGAATTCTTTCTCCCGGTCAGCTGCAAAGG 2040
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CAGTGGAGAACAACAGATGTTGCTGAATAACCTCTCCAGTACAATGCAAAGAATATGCAA 2100
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 AAGTCTGCGAACAGTTTATGAAGCAGAAGTTGATAATGTTAATGCTGGTACTGCAGCTGT 2160
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 GTTCAGGAAAAACAATGAGAGTTGCTTGCCAACTGGACACACAGAAAGTTCTTCACATGG 2220
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TGATCAGTCAATCACAGGAGCTTCATTCGAGGATACATCTTTAGCTAACAAGCCAGGAGT 2280
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CATGGAACCTGAGTTGGCTGAGCAGGTACAGCCTAGTTCCATAGGACATGCAGAGAAAAA 2340
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 GCGCAGTACAGCTGAGAAGAATATTAGCTTGGATGTTCTTCGTAAGTACTTCTCTGGGAG 2400
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CCTAAAGGATGCTGCAAAGAGCCTTGGTGTTTGTCCAACAACTTTGAAACGGATATGCCG 2460
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 GCATCATGGAATTTCACGATGGCCATCTCGCAAGATAAACAAGGTTAATCGTTCATTAAA 2520
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 GAAGATTCAAACTGTCATAAACTCTGTTCATGGTGTGGACAGATCCTTGCAATATGATCC 2580
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TGCTACTGGATCTCTTGTTCCAGTAGTTTCTCTGCCAGAAAAGTTGACATTCCCTTCTTG 2640
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CGATGGTTTGCCAACTCCATCAGTCGGAAAAACTGTGGAAGAGAATTCTGACCTAAAATC 2700
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TGAAGAAGGGTGTTCTTTGCCTGATGGATCGCAAAGACAAAGTTGCCAGTTGCAGATCTC 2760
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TGATGTGAAGAAAAGTAACGAGGATGAATTTCACATTGGCAGTGGTAACAGTGATTTTTA 2820
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TGGTGCAAATGCCACAGCAAAATCTAATTCTGAGGTCACACAAGGTCCATTATGTCCCAC 2880
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TGGTGCTTTTAGTGCTTTGCATCTCAAGGGAACAGATTGCACCAATCCTTCTAGCTCTCT 2940
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 CCGCCCAAGTTCCGAAAGCACCAGAAATCAAATAGTTGGAAGAAACTCACCATCTATACA 3000
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 ACAAGAAGATCTTGATATGCTTGACAATCATGAAGCCGAGGACAAGGACCACATGCACCC 3060
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 TTCTACCTCTGGTATGACTGACTCTTCTAGCGGCAGCGCATCAAGCCACCCTACCTTCAA 3120
consensus_6793#1 ------------------------------------------------------------
consensus_6793#0 ACAGAACACAAGAAGTGCTCTTAAAGATGCAGCCAGTCCTGCACTGACAGTTAAGGCAAC 3180
consensus_6793#1 ---------------GCCTTCTAAAAATCGAGCCAGTTCTGCATTGACAGTTAAGCCAGC 45
** **** ** ******* ***** *********** ** *
consensus_6793#0 CTACAACGGAGAC-ACTGTGCGGTTCAAGTTCTTGCCATCTATGGG-TTGGTATCACC-T 3237
consensus_6793#1 CTCCAAGGGAGGCCACTGTGCGGTTCAAGTTCTTGCCATCTATGGGGTTGGTATCCCCCT 105
** *** **** * ******************************** ******** ** *
consensus_6793#0 ATTGGAAGAAATAGCAAAGAGATTTAAGCTGCCAACCGGAGCATACCAGCTCAAGTACAA 3297
consensus_6793#1 ATTGCAAGAAATAGCAGAGATATGTAAGCGGCCAGCCGGAGCATTCCAGCTCAAGTACAA 165
**** *********** *** ** ***** **** ********* ***************
consensus_6793#0 GGACGACGAGGATGAATGGGTCATCTTGGCAAACGATTCAGATCTCCAGGAGTGCGTCGA 3357
consensus_6793#1 GGGCGACGAGGATGAATGGGTCATCTTGGCAAACAATTCAGATCTCCAGGAGTGGGTCGA 225
** ******************************* ******************* *****
consensus_6793#0 TGTTCTCGACTCCATAGGGTCGCGAATCGTGAAACTCCAGGTACGAGATCTCCCTTGCAT 3417
consensus_6793#1 TGTTCTCGACTCCATAGGGTCGCGAATCGTGAAACTCCAGGTACGAGATCTCCCTTGCAT 285
************************************************************
consensus_6793#0 CGTCAGCAGCTCGGGAAGCAGCACCTGCTTGCAGTTGGCGGCACATAGCTCATAACATGG 3477
consensus_6793#1 CGTCAGCAGCTCGGGAAGCAGCACCTGCTTGCAGTTGGCGGCACATAGCTCATAACATGG 345
************************************************************
consensus_6793#0 TAGGGAATCCTGGGCTCCTGTCACCCAACCCTCAACTGTACCATATTACAGTAGGCTAGT 3537
consensus_6793#1 TAGGGAATCCTGGGCTCCTGTCACCCAACCCTCAACTGTACCATATTACAGTAGGCTAGT 405
************************************************************
consensus_6793#0 CTTTGTTGTAGCAACAGCCAATAGGGTTTGTATTATGTATGCAGTAGGGTATATTATGCA 3597
consensus_6793#1 CTTTGTTGTAGCAACAGCCAATAGGGTTTGTATTATGCATGCAGTAGGGTATATTATGCA 465
************************************* **********************
consensus_6793#0 GTTTAGCTAGCATCAACGGTGGAGTCATCATCCCACACAGATCAGATCATATTCTCGCAA 3657
consensus_6793#1 GTTTAGCTAGCATCAACGGTGGAGTCATCATCCCACACAGATCAGATCATATTCTCGCAA 525
************************************************************
consensus_6793#0 GAAACAATGCCATTAAGGTCTTAAGTTTGTTGAACACGAGTACATGACAATAACCTGTTG 3717
consensus_6793#1 GAAACAATGCCATTAAGGTCTTAAGTTTGTTGAACCCGAGTACATGACAATAACCTGTTG 585
*********************************** ************************
consensus_6793#0 TCATGATGGTGTACCGTGCTTAAAAAAAAAA----------------------------- 3748
consensus_6793#1 TCATGATGGTGTACAGTGCTTGTGAATCGTGGTCCTGGCTCTCTGTTGTACTCCCTCCGG 645
************** ****** **
consensus_6793#0 ---------------------------------------
consensus_6793#1 TTTCATTTTAATTAACGTTTTAGCCAAAAAAAAAAAAAA 684
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||