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Oryza sativa
cluster # 6901 cluster # 6901       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6901#0 length = 1326 sequences # 4  
consensusID : consensus_6901#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1326
fasta sequence 
                              [TCGCGGCCACCGACATGTGGGCCCTCACCCCAAACAGCGGTGGGTCCTCCTGCCTCCCGGCGAGGCGCACCCCGCCGCCGCTCGCCGCCGCCGGCGAGGCCGGCTCGCTGGCCGCGGGGCCCGGGAGGTGGTGCTCGTGGAGGCGTCGTCAGCCGGCGGAGCGGTGGCCCAAGCTGGCGGTCAGCGCGTCAGGGAGGAAGAGCAAGGGCGGCCGCGACGAGGGCGGCGGCGACGAGCCCAAGAAGAACAAGGCGGCGTCCTCCTCCTCCTCCGGAAAAGGTGGTGCGTCTGCTCCCAGTGGAGATGTTTCAAATAATGAACTGCAATCCAATGACACAATGTATGTACCTGGTAACTTGTCATACTGGAGAGACGTTAGAGCAAGCTTTGTGGTTCCAAAGGTGCAAACAGTAGATGCACATACTCTACCACAAGCAGCTACGGATGCACCAGTGCACTGTCTTCCTCGGAAGTGGGCACATTCTATTCCAATGCCAGAATCTGGTTGTGTGCTGGTTGCTGCTGAAGAGCTTGATGGCAATGGTACGTTTGAGAGAACTGTAATTCTCCTCCTAAGATT--GGTTCAAGAGATGCCTATGACGGCCCATTTGGCGTCATCCTAAACCGTCCACTGTATA-CAAAAATGAAACACGTGAACCCATCGTTCCGCAA-CCAGGC-AACCCCTTTTAGTGATTGCT-CCCTCTTCTTTGGGGGACCTGTCGACATGAGCATATTCTTGATG-AGGACTACCGATGACAGACCAATT-AAGGGGTTCGAAGAGGTGTCGCCAGGCGTCTGCTTCGGTTTCAGGACTGACCTAGAGAAGGCCAGTGCTCTTTTGAAGAGTGGCGCGGTTAAGCCTGAGGACTTAAACTTCTATGTTGGGTACTCTGCCTGGGATTACGACCAGTTGTTGAGCGAGATTGATCAAGGATACTGGCATGTCACTTCCTGTAGCTCAGGCCTGATAAGCGACTCCCTTGCAACAGATCCTTCTTGCCTATGGACTGAGATATTGAAGCTGATGGGAGGCCAGTACGCAGAACTGAGTCAAAAGCCAAAGGAAGATGGCTCGTGAAAATTCTTGCTTGCTAGCATAGTTTGGCACAATTGACGTGCTTGGTTTGTACATAATTGGGAATAATCTCGCCCGGTCACTGGCCAGGGTAATTGAACAGTCCTAGTAGTAGTTTCATGTGGTCGTCTTTGTCCTCTGTATTACTTGAACAAATATTATGGAGTACTGGTGATAGAACGGTGTGGGCTGTGAATAATTACTGGAATTACATGCTTCCAT-CAATTTTCTATGTGCCACATAAAAATCCG]

[+] EMBL AK106349             [TCGCGGCCACCGACATGTGGGCCCTCACCCCAAACAGCGGTGGGTCCTCCTGCCTCCCGGCGAGGCGCACCCCGCCGCCGCTCGCCGCCGCCGGCGAGGCCGGCTCGCTGGCCGCGGGGCCCGGGAGGTGGTGCTCGTGGAGGCGTCGTCAGCCGGCGGAGCGGTGGCCCAAGCTGGCGGTCAGCGCGTCAGGGAGGAAGAGCAAGGGCGGCCGCGACGAGGGCGGCGGCGACGAGCCCAAGAAGAACAAGGCGGCGTCCTCCTCCTCCTCCGGAAAAGGTGGTGCGTCTGCTCCCAGTGGAGATGTTTCAAATAATGAACTGCAATCCAATGACACAATGTATGTACCTGGTAACTTGTCATACTGGAGAGACGTTAGAGCAAGCTTTGTGGTTCCAAAGGTGCAAACAGTAGATGCACATACTCTACCACAAGCAGCTACGGATGCACCAGTGCACTGTCTTCCTCGGAAGTGGGCACATTCTATTCCAATGCCAGAATCTGGTTGTGTGCTGGTTGCTGCTGAAGAGCTTGATGGCAATGGTACGTTTGAGAGAACTGTAATTCTCCTCCTAAGATT  GGTTCAAGAGATGCCTATGACGGCCCATTTGGCGTCATCCTAAACCGTCCACTGTATA CAAAAATGAAACACGTGAACCCATCGTTCCGCAA CCAGGC AACCCCTTTTAGTGATTGCT CCCTCTTCTTTGGGGGACCTGTCGACATGAGCATATTCTTGATG AGGACTACCGATGACAGACCAATT AAGGGGTTCGAAGAGGTGTCGCCAGGCGTCTGCTTCGGTTTCAGGACTGACCTAGAGAAGGCCAGTGCTCTTTTGAAGAGTGGCGCGGTTAAGCCTGAGGACTTAAACTTCTATGTTGGGTACTCTGCCTGGGATTACGACCAGTTGTTGAGCGAGATTGATCAAGGATACTGGCATGTCACTTCCTGTAGCTCAGGCCTGATAAGCGACTCCCTTGCAACAGATCCTTCTTGCCTATGGACTGAGATATTGAAGCTGATGGGAGGCCAGTACGCAGAACTGAGTCAAAAGCCAAAGGAAGATGGCTCGTGAAAATTCTTGCTTGCTAGCATAGTTTGGCACAATTGACGTGCTTGGTTTGTACATAATTGGGAATAATCTCGCCCGGTCACTGGCCAGGGTAATTGAACAGTCCTAGTAGTAGTTTCATGTGGTCGTCTTTGTCCTCTGTATTACTTGAACAAATATTATGGAGTACTGGTGATAGAACGGTGTGGGCTGTGAATAATTACTGGAATTACATGCTTCCAT CAATTTTCTATGTGCCACATAAAAATCCG]
[-] EMBL AU032660             [                                                                                                                                                                                                                                 GCGGCGACGAGCCCAAGAAGAACAAGGCGGCGTCCTCCTCCTCCTCCGGAAAAGGTGATGCGTCTGCTCCCAGTGGAGATGTTTCAAATAATGAACTGCAATCCAATGACACAATGTATGTACCTGGTAACTTGTCATATTGGAGAGACGTTAGAGCAAGCTTTGTGGTTCCAAAGGTGCAAACAGTAGATGCACATACTCTACCACAAGCAGCTACGGATGCACCAGTGCACTGTCTTCCTCGGAAGTGGGCACATTCTATTCCAATGCCAGAATCTGGTTGTGTGCTGGTTGCTGCTGAAGAGCTTGATGGCAATGGTACGTTTGAGAGAANTGTAATTCTCCTCCTAAGATTTAGGTTCAAGAGATGCCTATGACGGCCCATTTGGCGTCATCCTAAACCGTCCACTGTATACCAAAAATGAAACACGTGAACCCATCGTTCCGCAACCCAGGCAAACCCTTTTTAGTGATTGCTCCCCTCTTCTTTGGGGGA CTGTCGACATGAGCATATTCTTGATGAAGGACTACCGATGACAGACCAATTAAAGGGGTTCGAAGAGGTGTCGCCAAGCGTCTGCTTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL OSS13119A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATG TGGGNACTCTGCCT GGATTACGACNAGTTGTTGAGCGAGATTGATCAAGGATACTGGCATGTCACTTCCTGTAGCTCAGGCCTGATAAGCGACTCCCTTGCAACAGATCCTTCTTGCCTATGGACTGAGATATTGAAGCTGATGGGAGGCCAGTACGCAGAACTGAGTCAAAAGCCAAAGGAAGATGGCTCGTGAAAATTCTTGCTTGCTAGCATAGTTTGGCACAATTGACGTGCTTGGTTTGTACATAATTGGGAATAATCTCGCCCGGTCACTGGCCAGGGTAATTGAACAGTCCTAGTAGTAGTTTCATGTGGTCGTCTTTGTCCTCTGTATTACTTGAACAAATATTATGGAGTACTGGTGATAGAACGGTGTGGGCTGTGAATAATTACTGGAATTACAT                                      ]
[+] EMBL C74866               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGCTGATGGGAGGCCAGTACGCAGAACTGAGTCAAAAGCCAAAGGAAGATGGCTCGTGAAAATTCTTGCTTGCTAGCATAGTTTGGCACAATTGACGTGCTTGGTTTGTACATAATTGGGAATAATCTCGCCCGGTCACTGGCCAGGGTAATTGAACAGTCCTAGTAGTAGTTTCATGTGGTCGTCTTTGTCCTCTGTATTACTTGAACAAATATTATGGAGTACTGGTGATAGAACGGTGTGGGCTGTGAATAATTACTGGAATTACATGCTTCCATCCAATTTTCTA                   ]




>consensus_6901#0
TCGCGGCCACCGACATGTGGGCCCTCACCCCAAACAGCGGTGGGTCCTCCTGCCTCCCGG
CGAGGCGCACCCCGCCGCCGCTCGCCGCCGCCGGCGAGGCCGGCTCGCTGGCCGCGGGGC
CCGGGAGGTGGTGCTCGTGGAGGCGTCGTCAGCCGGCGGAGCGGTGGCCCAAGCTGGCGG
TCAGCGCGTCAGGGAGGAAGAGCAAGGGCGGCCGCGACGAGGGCGGCGGCGACGAGCCCA
AGAAGAACAAGGCGGCGTCCTCCTCCTCCTCCGGAAAAGGTGGTGCGTCTGCTCCCAGTG
GAGATGTTTCAAATAATGAACTGCAATCCAATGACACAATGTATGTACCTGGTAACTTGT
CATACTGGAGAGACGTTAGAGCAAGCTTTGTGGTTCCAAAGGTGCAAACAGTAGATGCAC
ATACTCTACCACAAGCAGCTACGGATGCACCAGTGCACTGTCTTCCTCGGAAGTGGGCAC
ATTCTATTCCAATGCCAGAATCTGGTTGTGTGCTGGTTGCTGCTGAAGAGCTTGATGGCA
ATGGTACGTTTGAGAGAACTGTAATTCTCCTCCTAAGATTGGTTCAAGAGATGCCTATGA
CGGCCCATTTGGCGTCATCCTAAACCGTCCACTGTATACAAAAATGAAACACGTGAACCC
ATCGTTCCGCAACCAGGCAACCCCTTTTAGTGATTGCTCCCTCTTCTTTGGGGGACCTGT
CGACATGAGCATATTCTTGATGAGGACTACCGATGACAGACCAATTAAGGGGTTCGAAGA
GGTGTCGCCAGGCGTCTGCTTCGGTTTCAGGACTGACCTAGAGAAGGCCAGTGCTCTTTT
GAAGAGTGGCGCGGTTAAGCCTGAGGACTTAAACTTCTATGTTGGGTACTCTGCCTGGGA
TTACGACCAGTTGTTGAGCGAGATTGATCAAGGATACTGGCATGTCACTTCCTGTAGCTC
AGGCCTGATAAGCGACTCCCTTGCAACAGATCCTTCTTGCCTATGGACTGAGATATTGAA
GCTGATGGGAGGCCAGTACGCAGAACTGAGTCAAAAGCCAAAGGAAGATGGCTCGTGAAA
ATTCTTGCTTGCTAGCATAGTTTGGCACAATTGACGTGCTTGGTTTGTACATAATTGGGA
ATAATCTCGCCCGGTCACTGGCCAGGGTAATTGAACAGTCCTAGTAGTAGTTTCATGTGG
TCGTCTTTGTCCTCTGTATTACTTGAACAAATATTATGGAGTACTGGTGATAGAACGGTG
TGGGCTGTGAATAATTACTGGAATTACATGCTTCCATCAATTTTCTATGTGCCACATAAA
AATCCG

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)